View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17452_high_25 (Length: 453)

Name: NF17452_high_25
Description: NF17452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17452_high_25
NF17452_high_25
[»] chr6 (28 HSPs)
chr6 (10-435)||(3229039-3229464)
chr6 (54-287)||(19107920-19108153)
chr6 (51-435)||(11680736-11681134)
chr6 (95-287)||(31129729-31129921)
chr6 (51-283)||(26817346-26817582)
chr6 (182-263)||(1422964-1423045)
chr6 (183-263)||(15060175-15060255)
chr6 (183-263)||(18675362-18675442)
chr6 (183-263)||(33516641-33516721)
chr6 (183-261)||(4065602-4065680)
chr6 (183-248)||(21442661-21442726)
chr6 (183-287)||(34043528-34043633)
chr6 (183-263)||(1131783-1131863)
chr6 (183-263)||(22012131-22012211)
chr6 (72-173)||(22524816-22524917)
chr6 (183-287)||(1603354-1603458)
chr6 (206-253)||(22524745-22524792)
chr6 (200-364)||(20990339-20990509)
chr6 (211-273)||(26212906-26212968)
chr6 (52-133)||(4090675-4090756)
chr6 (184-261)||(4090808-4090885)
chr6 (20-57)||(22524953-22524990)
chr6 (51-133)||(4065468-4065550)
chr6 (183-287)||(12269383-12269487)
chr6 (309-364)||(1131675-1131730)
chr6 (316-352)||(19107852-19107888)
chr6 (309-345)||(30358802-30358838)
chr6 (309-345)||(30359619-30359655)
[»] chr4 (39 HSPs)
chr4 (51-435)||(1843041-1843433)
chr4 (51-285)||(9921735-9921969)
chr4 (51-287)||(52459000-52459241)
chr4 (51-287)||(52460257-52460498)
chr4 (51-284)||(41509074-41509310)
chr4 (87-283)||(10142131-10142332)
chr4 (51-247)||(24611230-24611430)
chr4 (143-263)||(42512202-42512326)
chr4 (51-361)||(13957156-13957462)
chr4 (51-133)||(3665317-3665399)
chr4 (76-260)||(21320025-21320212)
chr4 (309-404)||(22594136-22594235)
chr4 (147-263)||(9900042-9900157)
chr4 (183-263)||(51337651-51337731)
chr4 (51-286)||(10373250-10373490)
chr4 (160-259)||(3665451-3665554)
chr4 (51-133)||(42511602-42511684)
chr4 (183-287)||(10095037-10095142)
chr4 (183-287)||(39480266-39480371)
chr4 (309-424)||(51758290-51758409)
chr4 (183-287)||(6261596-6261701)
chr4 (183-287)||(28143470-28143575)
chr4 (332-435)||(9922018-9922124)
chr4 (198-283)||(29283041-29283126)
chr4 (88-243)||(25201039-25201198)
chr4 (227-286)||(23935836-23935896)
chr4 (309-364)||(9900208-9900263)
chr4 (215-287)||(7413790-7413863)
chr4 (215-287)||(7459871-7459944)
chr4 (55-112)||(9896427-9896484)
chr4 (183-287)||(14192338-14192443)
chr4 (309-352)||(10142057-10142100)
chr4 (183-244)||(51890447-51890508)
chr4 (183-244)||(51890721-51890782)
chr4 (312-352)||(29283160-29283199)
chr4 (183-259)||(56366890-56366966)
chr4 (309-355)||(52458927-52458973)
chr4 (309-355)||(52460184-52460230)
chr4 (19-55)||(9896371-9896407)
[»] chr3 (37 HSPs)
chr3 (51-283)||(29713794-29714027)
chr3 (51-435)||(10992954-10993345)
chr3 (51-286)||(47184950-47185190)
chr3 (51-422)||(44663219-44663584)
chr3 (51-273)||(11639871-11640097)
chr3 (51-263)||(30191048-30191264)
chr3 (20-287)||(44663167-44663444)
chr3 (54-273)||(12893049-12893273)
chr3 (51-246)||(1424721-1424918)
chr3 (183-287)||(10994164-10994269)
chr3 (141-259)||(53472134-53472256)
chr3 (183-364)||(1698321-1698508)
chr3 (51-272)||(3918003-3918235)
chr3 (183-287)||(19157077-19157182)
chr3 (183-263)||(27941531-27941611)
chr3 (183-285)||(53076983-53077086)
chr3 (198-272)||(17147218-17147291)
chr3 (143-249)||(4127547-4127656)
chr3 (183-263)||(23044911-23044991)
chr3 (183-286)||(25071628-25071732)
chr3 (183-262)||(15760869-15760948)
chr3 (183-287)||(31884971-31885076)
chr3 (315-391)||(17147131-17147206)
chr3 (51-133)||(46947532-46947614)
chr3 (183-263)||(16876891-16876968)
chr3 (183-263)||(6024780-6024860)
chr3 (183-263)||(6583978-6584058)
chr3 (309-355)||(1424609-1424655)
chr3 (183-283)||(40145454-40145552)
chr3 (184-259)||(9467477-9467552)
chr3 (309-364)||(25071545-25071600)
chr3 (309-352)||(30191314-30191357)
chr3 (184-259)||(33443564-33443639)
chr3 (309-364)||(47184868-47184922)
chr3 (200-263)||(52448152-52448215)
chr3 (64-110)||(11830382-11830428)
chr3 (309-345)||(4127254-4127290)
[»] chr7 (45 HSPs)
chr7 (51-431)||(5770710-5771091)
chr7 (51-287)||(21863583-21863823)
chr7 (51-259)||(9420468-9420680)
chr7 (58-285)||(40934035-40934266)
chr7 (198-286)||(41822165-41822254)
chr7 (51-263)||(8113794-8114008)
chr7 (183-287)||(24441942-24442047)
chr7 (142-287)||(43179395-43179544)
chr7 (183-286)||(39038906-39039010)
chr7 (51-263)||(45445948-45446162)
chr7 (183-263)||(29636906-29636986)
chr7 (183-263)||(28460258-28460337)
chr7 (176-283)||(35118256-35118360)
chr7 (51-259)||(44733649-44733858)
chr7 (183-266)||(8069577-8069660)
chr7 (183-285)||(31072539-31072642)
chr7 (183-265)||(48238457-48238539)
chr7 (183-287)||(8389314-8389419)
chr7 (183-287)||(48636677-48636782)
chr7 (79-287)||(8604505-8604717)
chr7 (54-128)||(3123876-3123950)
chr7 (183-287)||(6189418-6189523)
chr7 (183-263)||(20394800-20394880)
chr7 (200-263)||(3124289-3124352)
chr7 (52-133)||(36628600-36628681)
chr7 (183-263)||(1623574-1623653)
chr7 (200-287)||(4539850-4539938)
chr7 (312-364)||(8114062-8114113)
chr7 (305-352)||(28460372-28460419)
chr7 (200-263)||(35478009-35478072)
chr7 (200-364)||(18667270-18667440)
chr7 (309-425)||(4539707-4539823)
chr7 (215-272)||(23381104-23381161)
chr7 (76-133)||(28460145-28460202)
chr7 (299-364)||(35478114-35478179)
chr7 (184-261)||(36628470-36628547)
chr7 (183-263)||(135663-135743)
chr7 (183-259)||(10015748-10015824)
chr7 (200-248)||(13754139-13754187)
chr7 (309-352)||(8604740-8604783)
chr7 (184-259)||(37548790-37548865)
chr7 (51-98)||(39038803-39038850)
chr7 (315-349)||(35118399-35118433)
chr7 (316-349)||(23381021-23381054)
chr7 (309-361)||(41822282-41822334)
[»] chr2 (46 HSPs)
chr2 (78-418)||(38566113-38566457)
chr2 (52-435)||(41302329-41302718)
chr2 (51-287)||(19091063-19091303)
chr2 (53-287)||(24484460-24484696)
chr2 (51-364)||(14903927-14904249)
chr2 (76-287)||(30386838-30387053)
chr2 (64-287)||(10022894-10023122)
chr2 (183-287)||(33054757-33054862)
chr2 (51-287)||(11199164-11199405)
chr2 (141-240)||(41422822-41422921)
chr2 (65-272)||(6882998-6883210)
chr2 (51-263)||(25621448-25621663)
chr2 (51-287)||(38422817-38423056)
chr2 (183-263)||(13597890-13597969)
chr2 (183-287)||(7880374-7880479)
chr2 (183-287)||(22575999-22576104)
chr2 (183-287)||(45277506-45277611)
chr2 (59-171)||(31549050-31549162)
chr2 (183-287)||(27861836-27861941)
chr2 (215-287)||(41422922-41422995)
chr2 (183-263)||(19678028-19678108)
chr2 (183-263)||(44314058-44314138)
chr2 (183-263)||(44322237-44322317)
chr2 (183-364)||(41825979-41826166)
chr2 (198-283)||(9057388-9057472)
chr2 (183-263)||(33015208-33015288)
chr2 (183-287)||(2554040-2554145)
chr2 (183-287)||(2565596-2565701)
chr2 (324-434)||(21573817-21573931)
chr2 (51-128)||(41422436-41422513)
chr2 (184-261)||(43673290-43673367)
chr2 (183-263)||(18781197-18781277)
chr2 (312-364)||(24484379-24484431)
chr2 (183-263)||(29303176-29303256)
chr2 (207-248)||(6221410-6221451)
chr2 (184-245)||(9425217-9425278)
chr2 (209-285)||(19685779-19685856)
chr2 (51-112)||(43673157-43673218)
chr2 (312-352)||(19091333-19091373)
chr2 (312-351)||(13598023-13598062)
chr2 (299-345)||(11199422-11199468)
chr2 (19-53)||(24484717-24484751)
chr2 (299-364)||(2553958-2554023)
chr2 (243-287)||(31549160-31549205)
chr2 (19-56)||(38566053-38566090)
chr2 (371-435)||(41423072-41423136)
[»] chr8 (29 HSPs)
chr8 (51-287)||(9137518-9137755)
chr8 (52-263)||(24190229-24190440)
chr8 (51-287)||(11648633-11648873)
chr8 (97-286)||(9382150-9382344)
chr8 (183-287)||(1981580-1981685)
chr8 (183-287)||(4432087-4432192)
chr8 (183-287)||(45117450-45117555)
chr8 (81-263)||(28374474-28374658)
chr8 (183-285)||(31597508-31597611)
chr8 (183-287)||(6927561-6927666)
chr8 (183-287)||(28509235-28509340)
chr8 (183-248)||(3762721-3762786)
chr8 (183-283)||(7972996-7973097)
chr8 (183-272)||(32073258-32073347)
chr8 (183-263)||(16729739-16729819)
chr8 (176-273)||(23232232-23232329)
chr8 (183-287)||(39906231-39906336)
chr8 (183-263)||(2879232-2879312)
chr8 (183-263)||(40971451-40971531)
chr8 (313-364)||(11648903-11648954)
chr8 (182-287)||(24682599-24682705)
chr8 (319-421)||(24190502-24190608)
chr8 (183-263)||(2807704-2807784)
chr8 (207-263)||(7263671-7263727)
chr8 (309-364)||(18327255-18327310)
chr8 (185-263)||(10697348-10697426)
chr8 (299-364)||(7263769-7263834)
chr8 (202-259)||(12700243-12700300)
chr8 (312-352)||(23232373-23232413)
[»] scaffold0116 (2 HSPs)
scaffold0116 (53-287)||(40800-41035)
scaffold0116 (315-435)||(40644-40768)
[»] scaffold0263 (1 HSPs)
scaffold0263 (51-287)||(18478-18719)
[»] chr1 (33 HSPs)
chr1 (51-263)||(5509734-5509950)
chr1 (51-263)||(5209559-5209775)
chr1 (51-263)||(24185544-24185759)
chr1 (83-287)||(47397437-47397647)
chr1 (55-287)||(12027771-12028008)
chr1 (183-263)||(49229352-49229432)
chr1 (183-425)||(17967339-17967589)
chr1 (76-260)||(47559456-47559642)
chr1 (183-287)||(25095149-25095254)
chr1 (198-263)||(48646163-48646228)
chr1 (183-287)||(36296677-36296782)
chr1 (183-287)||(48596367-48596472)
chr1 (183-285)||(5049441-5049544)
chr1 (183-287)||(23664123-23664228)
chr1 (183-287)||(28945834-28945939)
chr1 (183-287)||(42722212-42722317)
chr1 (183-282)||(9023202-9023302)
chr1 (183-285)||(21906365-21906468)
chr1 (183-285)||(27430805-27430908)
chr1 (183-285)||(34307461-34307564)
chr1 (209-287)||(44310439-44310518)
chr1 (183-287)||(22070487-22070592)
chr1 (183-287)||(26221659-26221764)
chr1 (51-116)||(44310547-44310612)
chr1 (305-363)||(47397674-47397732)
chr1 (198-273)||(12784000-12784074)
chr1 (183-272)||(17385407-17385495)
chr1 (209-285)||(48999389-48999466)
chr1 (309-364)||(5049357-5049412)
chr1 (309-352)||(9023128-9023171)
chr1 (309-364)||(34307593-34307648)
chr1 (309-352)||(48646069-48646112)
chr1 (183-259)||(41665615-41665691)
[»] scaffold1266 (2 HSPs)
scaffold1266 (51-287)||(1297-1538)
scaffold1266 (309-360)||(1217-1270)
[»] scaffold0160 (1 HSPs)
scaffold0160 (64-404)||(24980-25330)
[»] chr5 (39 HSPs)
chr5 (51-273)||(8806198-8806423)
chr5 (58-287)||(5121074-5121310)
chr5 (51-133)||(23151549-23151631)
chr5 (51-287)||(13826094-13826340)
chr5 (51-287)||(38915594-38915834)
chr5 (72-259)||(37134741-37134932)
chr5 (51-260)||(29789557-29789770)
chr5 (51-263)||(3654681-3654896)
chr5 (183-287)||(13820884-13820989)
chr5 (51-286)||(43171283-43171518)
chr5 (183-287)||(5578623-5578728)
chr5 (51-364)||(16040069-16040388)
chr5 (150-287)||(29149637-29149778)
chr5 (200-287)||(20892299-20892387)
chr5 (183-287)||(38491021-38491126)
chr5 (183-286)||(9409567-9409671)
chr5 (183-285)||(13382615-13382718)
chr5 (183-287)||(7850289-7850394)
chr5 (51-132)||(13820745-13820826)
chr5 (183-263)||(42879604-42879684)
chr5 (51-174)||(20891273-20891396)
chr5 (183-287)||(2676949-2677053)
chr5 (183-287)||(13490374-13490479)
chr5 (183-248)||(23962874-23962939)
chr5 (10-57)||(23151646-23151693)
chr5 (51-114)||(29150502-29150565)
chr5 (176-283)||(6769371-6769476)
chr5 (209-285)||(18889054-18889131)
chr5 (309-425)||(18888907-18889025)
chr5 (309-361)||(13826366-13826418)
chr5 (183-259)||(32698770-32698846)
chr5 (305-352)||(9409695-9409742)
chr5 (309-431)||(40583480-40583603)
chr5 (184-259)||(43323727-43323802)
chr5 (214-260)||(16686724-16686770)
chr5 (324-362)||(38915878-38915916)
chr5 (299-344)||(29789468-29789513)
chr5 (312-345)||(37134709-37134742)
chr5 (299-405)||(3654527-3654639)
[»] scaffold0002 (1 HSPs)
scaffold0002 (51-243)||(98229-98425)
[»] scaffold1364 (1 HSPs)
scaffold1364 (51-243)||(873-1073)
[»] scaffold0178 (2 HSPs)
scaffold0178 (141-287)||(2398-2549)
scaffold0178 (51-133)||(1120-1201)
[»] scaffold0743 (1 HSPs)
scaffold0743 (176-263)||(3311-3398)
[»] scaffold0016 (4 HSPs)
scaffold0016 (182-287)||(88121-88227)
scaffold0016 (182-287)||(88597-88703)
scaffold0016 (182-287)||(89073-89179)
scaffold0016 (183-364)||(87648-87834)
[»] scaffold0137 (2 HSPs)
scaffold0137 (51-133)||(21313-21395)
scaffold0137 (183-263)||(21455-21536)
[»] scaffold0093 (1 HSPs)
scaffold0093 (200-263)||(50937-51000)
[»] scaffold0064 (1 HSPs)
scaffold0064 (197-251)||(60557-60610)


Alignment Details
Target: chr6 (Bit Score: 337; Significance: 0; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 10 - 435
Target Start/End: Original strand, 3229039 - 3229464
Alignment:
Q  10 agaacctgtgaaatgatcatgaatgtgtctcacatcggtttcatgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttg 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3229039 agaacctgtgaaatgatcatgaatgtgtctcacatcggtttcatgatcttgcaatatcaaattcaattttgcaatcctttcaattaattcaagaaatttg 3229138  T
Q  110 acattacaatattgatataatttannnnnnnggaaccttagaaagacacgattaagattaatttcataggctaattttcaactaagaaataatttgtttt 209  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  3229139 acattacaatattgatataatttatttttttggaaccttagaaagacacgattaagattaatttcgtaggctaattttcaactaggaaataatttgtttt 3229238  T
Q  210 gttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgaggacattattaggaaccccnnnnnnnntatcgctaagt 309  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||        ||||||||| |    
T  3229239 gttatgaaaattatccacatttcttggataataaatatcaccaatatttttaattttagtgaggacattattaggaaaccccaaaaaaatatcgctaatt 3229338  T
Q  310 tcttcgataataaattttttggcacattattaagaaaaaccaatttattttatagagtgggtataaaaatctttgtgttatacgagagtatatataacaa 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  3229339 tcttcgataataaattttttggcacattattaagaaaaaccaatttattttatagagagggtatagaaacctttgtgttatacgagagtatatataacaa 3229438  T
Q  410 atctcgctaaaagggcttaaaacatt 435  Q
    ||||| ||||||||||||||||||||    
T  3229439 atctcactaaaagggcttaaaacatt 3229464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 54 - 287
Target Start/End: Complemental strand, 19108153 - 19107920
Alignment:
Q  54 gatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaa 153  Q
    ||||||||||||||  |||||||||||||| |||| |||| ||||||||||| |||||||||||||||||| ||||||||       | ||||||| |||    
T  19108153 gatcttgcaatatcgtattcaattttgcaaccttt-caatcaattcaagaaagttgacattacaatattgaaataatttatttttttgaaaccttacaaa 19108055  T
Q  154 gacacgattaagattaatttcataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaa 253  Q
    || | ||||||||||||||||  | ||| |||||||||||| | |||  || ||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  19108054 gagaagattaagattaatttcggatgctcattttcaactaaaatatatatttttttgttttgaaaattatcccaattttttggataataaatatcaccaa 19107955  T
Q  254 tatttttaattttggtgagg-acattattaggaac 287  Q
    |||||||||| || |||||| ||||||| ||||||    
T  19107954 tatttttaatattagtgaggaacattatcaggaac 19107920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 51 - 435
Target Start/End: Original strand, 11680736 - 11681134
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| |||||||||||| | ||||||| ||||||| ||||||||||| |||||||||  |||||||| | |||||       | |||||| |    
T  11680736 catgatcttgcattatcaaattcaactatgcaatcctttcaatcaattcaagaaagttgacattattatattgatgtgatttatttgtttgaaacctttg 11680835  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||| | |||||||||||||||      |||| | |||||||||||| | |||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  11680836 aaagataagattaagattaatttttctagtaggttcattttcaactaaaatataatttgttttgttatgaaaattattccaatttattggataataaata 11680935  T
Q  247 tcaccaatatttttaattttggtg-aggacattattaggaa-----ccccnnnnnnnntatcgctaagttcttcgataataaattttttggcacattatt 340  Q
    ||||||||||||||||| || ||| || |||||||||||||       ||        |||  |||| ||||| |||||||| ||||||| ||||| |||    
T  11680936 tcaccaatatttttaatattagtgaagcacattattaggaaaaaagggcccaaaaaaatattactaatttcttggataataatttttttgacacatcatt 11681035  T
Q  341 aagaaaaaccaatttattttatagagtggg----tataaaaatctttgtgttatacgagagtatatataacaaatctcgctaaaagggcttaaaacatt 435  Q
    ||||| ||||||||| || ||||| | |||    |||| |||||||||||||||| ||| ||| ||||| |||||  ||| ||||||||  ||||||||    
T  11681036 aagaacaaccaattttttatatagggagggtgtatatagaaatctttgtgttatatgagggtacatatagcaaattgcgccaaaagggccaaaaacatt 11681134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 95 - 287
Target Start/End: Complemental strand, 31129921 - 31129729
Alignment:
Q  95 aattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacacgattaagattaatttcataggctaattttcaactaa 194  Q
    ||||||||||| ||| ||| |||||||| ||||||||||       | ||||| ||||| | | |||||||||||||||||||| || ||||||||||||    
T  31129921 aattcaagaaagttgtcatcacaatattaatataatttatttttttgaaacctgagaaatataagattaagattaatttcatagactcattttcaactaa 31129822  T
Q  195 gaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg-acattattaggaac 287  Q
     |  ||||| ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||  | |||||| ||||||||| ||||    
T  31129821 aatgtaatt-gttttgttatgaaaattatcccaatttctttgataataaatatcatcaatatttttaatactagtgaggcacattattaagaac 31129729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 51 - 283
Target Start/End: Complemental strand, 26817582 - 26817346
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgat-ataatttannnnnnnggaacctta 149  Q
    |||||||||||| |||||||||||||| ||||||| ||||||| ||||||||||| || ||||||| |||||||| | || ||        |||| |||     
T  26817582 catgatcttgcattatcaaattcaattctgcaatcatttcaatcaattcaagaaagttaacattactatattgataaaaaatttgttttttggaatcttt 26817483  T
Q  150 gaaagacacgattaagattaatttc----ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaat 245  Q
    |||||||| ||||||||||||||||     || ||  |||||||||||| | | ||||||  |||||||||||| ||||| |||||||||||||||||||    
T  26817482 gaaagacaagattaagattaatttctctagtatgcctattttcaactaaaatagaatttg--ttgttatgaaaaatatcccaatttcttggataataaat 26817385  T
Q  246 atcaccaatatttttaattttggtgagg-acattattag 283  Q
    |||| | |||||| |||| || || ||| ||||||||||    
T  26817384 atcatcgatatttgtaatattagttaggcacattattag 26817346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 1423045 - 1422964
Alignment:
Q  182 aattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    ||||||||||||| | | |||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  1423045 aattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcatcaatatttttaat 1422964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 15060255 - 15060175
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    ||||| |||||| | | |||||||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||    
T  15060255 atttttaactaaaatagaatttgttttgttatgaaaattatctcaatttcttggataataaatatcatcgatatttttaat 15060175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 18675442 - 18675362
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    ||||| |||||| | | |||||| ||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||    
T  18675442 atttttaactaaaatagaatttgctttgttatgaaaattatcctaatttcttggataataaatatcgacaatatttttaat 18675362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 33516641 - 33516721
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | |||||||||||||||||||||||| ||| |||||  |||||||||||||||||  |||||||||||    
T  33516641 attttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacatatatttttaat 33516721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 4065602 - 4065680
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatattttta 261  Q
    |||||||||||| | || ||||||||||||||||| | | | | |||||||||||||||||||||||||||||||||||    
T  4065602 attttcaactaaaatatcatttgttttgttatgaagagtcttccaatttcttggataataaatatcaccaatattttta 4065680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 21442726 - 21442661
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatc 248  Q
    |||||||||||| | | |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  21442726 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatc 21442661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 34043633 - 34043528
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| |||||||||||||||||||  |||||||||||||||||||||  | ||||||||||| ||  || || ||||||||    
T  34043633 attttcaactaaaatagaatttgctttgttatgaaaattatccccatttcttggataataaatatcgtcgatatttttaatattaatgaagaacattatt 34043534  T
Q  282 aggaac 287  Q
    ||||||    
T  34043533 aggaac 34043528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 1131863 - 1131783
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | | |||||| ||| ||||||||||||||| ||||||||||||||||||||||  | |||||||||||    
T  1131863 attttcaactaaaatagaatttgctttattatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaat 1131783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 22012131 - 22012211
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | | |||||| ||||||||||||||||||  ||||||||||||||||||||||  | |||||||||||    
T  22012131 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaat 22012211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 22524917 - 22524816
Alignment:
Q  72 tcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacacgattaagattaat 171  Q
    |||||||| ||||||||||||| ||||||||||| ||| ||| |||||| ||||||||||||       ||||||||| ||||||| |||||||||| ||    
T  22524917 tcaattttacaatcttttcaatcaattcaagaaagttgtcatcacaataatgatataatttatttttttggaaccttaaaaagacaagattaagattcat 22524818  T
Q  172 tt 173  Q
    ||    
T  22524817 tt 22524816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 1603458 - 1603354
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| |||||||||||||||||||  |||||||||||||||||||||  | ||||||||||| ||  || || ||||||||    
T  1603458 attttcaactaa-atagaatttgctttgttatgaaaattatcctcatttcttggataataaatatcgtcgatatttttaatattaatgaagcacattatt 1603360  T
Q  282 aggaac 287  Q
    ||||||    
T  1603359 aggaac 1603354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 22524792 - 22524745
Alignment:
Q  206 ttttgttatgaaaattatccaaatttcttggataataaatatcaccaa 253  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||    
T  22524792 ttttgttatgaaaatcatcccaatttcttggataataaatatcaccaa 22524745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 200 - 364
Target Start/End: Complemental strand, 20990509 - 20990339
Alignment:
Q  200 aatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattattaggaac-----cccnnn 293  Q
    |||||| ||||| ||||||||||||  ||||||||||||||||||||||  | ||||||||||| || ||| || ||||||||| ||||      ||       
T  20990509 aatttgctttgtaatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattattaagaacaaagggcccaa 20990410  T
Q  294 nnnnntatcgctaagttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
         |||| |||| |||||||||||||||||||   ||| ||||||||||| ||||||||| ||||||||    
T  20990409 taaaatatcactaatttcttcgataataaattttcaagcatattattaagaacaaccaattttttttatag 20990339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 26212906 - 26212968
Alignment:
Q  211 ttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg 273  Q
    |||||||||||||||  |||||||||||||||||||||| | ||||||||||| || ||||||    
T  26212906 ttatgaaaattatcctgatttcttggataataaatatcatcgatatttttaatattagtgagg 26212968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 4090675 - 4090756
Alignment:
Q  52 atgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataattta 133  Q
    ||||||||||| |||| ||||||||| | ||||||||||||| |||| |||||| |||||| ||  ||||| ||||||||||    
T  4090675 atgatcttgcattatctaattcaattctacaatcttttcaatcaatttaagaaagttgacactattatattaatataattta 4090756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 261
Target Start/End: Original strand, 4090808 - 4090885
Alignment:
Q  184 ttttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatattttta 261  Q
    ||||||||||| | ||  |||||||||||||||| ||| ||  ||||||||||||||||||||| | |||||||||||    
T  4090808 ttttcaactaaaatatcgtttgttttgttatgaagattctcgcaatttcttggataataaatattatcaatattttta 4090885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 22524990 - 22524953
Alignment:
Q  20 aaatgatcatgaatgtgtctcacatcggtttcatgatc 57  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22524990 aaatgatcatgaatgtgtctcacatcggtttcatgatc 22524953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 4065468 - 4065550
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataattta 133  Q
    |||||||||||| |||||||||||||| ||||||  ||||||| ||| || |||| |||||||||   |||| ||||||||||    
T  4065468 catgatcttgcattatcaaattcaattatgcaatgctttcaatcaatccatgaaagttgacattattgtattaatataattta 4065550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 12269487 - 12269383
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    ||||| |||||| | ||||||||||||||| |||| ||| ||| ||||| || ||||||||||||||  |||||||||||| || || ||  ||||||||    
T  12269487 atttttaactaaaatataatttgttttgttgtgaagattctcctaattttttagataataaatatca-aaatatttttaatattagtaagacacattatt 12269389  T
Q  282 aggaac 287  Q
    ||||||    
T  12269388 aggaac 12269383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 1131730 - 1131675
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
    |||||||||||||||||||   ||| ||||||||||| ||||||||| ||||||||    
T  1131730 ttcttcgataataaattttcgagcatattattaagaacaaccaattttttttatag 1131675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 352
Target Start/End: Complemental strand, 19107888 - 19107852
Alignment:
Q  316 ataataaattttttggcacattattaagaaaaaccaa 352  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  19107888 ataataatttttttggcacattattaagaataaccaa 19107852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 345
Target Start/End: Complemental strand, 30358838 - 30358802
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaa 345  Q
    ||||||| | |||||||||||||||||||||||||||    
T  30358838 ttcttcgttgataaattttttggcacattattaagaa 30358802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 345
Target Start/End: Complemental strand, 30359655 - 30359619
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaa 345  Q
    ||||||| | |||||||||||||||||||||||||||    
T  30359655 ttcttcgttgataaattttttggcacattattaagaa 30359619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 6e-81; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 51 - 435
Target Start/End: Original strand, 1843041 - 1843433
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||||||||||||| ||||||||||       ||||||||||    
T  1843041 catgatcttgcaatatcatattcaattttgcagtcttttcaatcaattcaagaaagttgacattacaatatttatataatttatttttttggaaccttag 1843140  T
Q  151 aaagacacgattaagattaatttcataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcac 250  Q
    ||||||| ||||||||||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||| |||||||| |||||| |||||| |    
T  1843141 aaagacaagattaagattaatttcataggctcattttcaacaaaaatataatttgttttgttatgaaaattatcccaatttcttagataatgaatatctc 1843240  T
Q  251 caatatttttaattttggtgagg-acattattaggaac-----cccnnnnnnnntatcgctaagttcttcgataataaattttttggcacattattaaga 344  Q
    ||||||||||||| || |||||| ||||||||||||||      ||        |||| |||| |||| | ||||||| |||||||  | ||||||||||    
T  1843241 caatatttttaatattagtgaggcacattattaggaacaaagggcccaaaaaaatatctctaatttctcccataataatttttttgatatattattaaga 1843340  T
Q  345 aaaaccaatttattttataga--gtgggtataaaaatctttgtgttatacgagagtatatataacaaatctcgctaaaagggcttaaaacatt 435  Q
    ||||||||||| || ||  ||  |||  |||| ||||||||||||||||  |||||||||||||||||||| || ||||| |  |||||||||    
T  1843341 aaaaccaattttttatagggatggtgtatatagaaatctttgtgttatataagagtatatataacaaatctagccaaaagagtctaaaacatt 1843433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 51 - 285
Target Start/End: Original strand, 9921735 - 9921969
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||||||||| ||||||||||| |||| ||| ||| ||||||| || ||| ||||||||||||||||||||||||       | ||||||||    
T  9921735 catgatcttgcaatatcatattcaattttgaaatcctttaaatcaattcaaaaagttt-acattacaatattgatataatttattattttgaaaccttag 9921833  T
Q  151 aaagacacgattaagattaatttcataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcac 250  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| | |||||||||||| ||| ||||||||||| |||||||||||||||||||||||     
T  9921834 aaagacaagattaagattaatttcataggctcattttcaactaaaatataatttgttttattacgaaaattatcccaatttcttggataataaatatcat 9921933  T
Q  251 caatatttttaattttggtgag-gacattattagga 285  Q
    ||||||||||||| || |||||  ||||||||||||    
T  9921934 caatatttttaatattagtgagacacattattagga 9921969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 51 - 287
Target Start/End: Complemental strand, 52459241 - 52459000
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| |||||||||||||| ||||||| |||| || || |||||||| ||||||||||  |||||||||||||||       |||| ||| |    
T  52459241 catgatcttgcattatcaaattcaattctgcaatcctttctataaagtcaagaaagttgacattactgtattgatataatttatttttttggaatctttg 52459142  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||||| ||||||| ||||||||     |||||  |||||||||||| | | |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  52459141 aaagacaagattaaggttaatttctctggtaggcccattttcaactaaaatagaatttgttttgttatgaaaaatatcccaatttcttggataataaata 52459042  T
Q  247 tcaccaatatttttaattttggtgag-gacattattaggaac 287  Q
    ||| | ||||||||||| || |||||  ||||||||||||||    
T  52459041 tcatcgatatttttaatattagtgagacacattattaggaac 52459000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 51 - 287
Target Start/End: Complemental strand, 52460498 - 52460257
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| |||||||||||||| ||||||| |||| || || |||||||| ||||||||||  |||||||||||||||       |||| ||| |    
T  52460498 catgatcttgcattatcaaattcaattctgcaatcctttctataaagtcaagaaagttgacattactgtattgatataatttatttttttggaatctttg 52460399  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||||| ||||||| ||||||||     |||||  |||||||||||| | | |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  52460398 aaagacaagattaaggttaatttctctggtaggcccattttcaactaaaatagaatttgttttgttatgaaaaatatcccaatttcttggataataaata 52460299  T
Q  247 tcaccaatatttttaattttggtgag-gacattattaggaac 287  Q
    ||| | ||||||||||| || |||||  ||||||||||||||    
T  52460298 tcatcgatatttttaatattagtgagacacattattaggaac 52460257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 51 - 284
Target Start/End: Original strand, 41509074 - 41509310
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||| || || ||||||||||||||||| |||| ||| ||| ||||||||||| |||||||||| ||  ||||||||||||       |||||||| |    
T  41509074 catgattttccattatcaaattcaattttgtaatcattttaat-aattcaagaaagttgacattactattatgatataatttaattttttggaacctttg 41509172  T
Q  151 aaagacacgattaagattaatttc----ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||| | || |||||||||||||||    ||||||  |||||||||||| | ||||||||||| ||||| |||||| ||  ||||||||||||||||||||    
T  41509173 aaaaagaccattaagattaatttctctaataggcagattttcaactaaaatataatttgtttagttat-aaaattgtctcaatttcttggataataaata 41509271  T
Q  247 tcaccaatatttttaattttggtgag-gacattattagg 284  Q
    | ||||||||||||||| || |||||  |||||||||||    
T  41509272 ttaccaatatttttaatattagtgagacacattattagg 41509310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 87 - 283
Target Start/End: Complemental strand, 10142332 - 10142131
Alignment:
Q  87 tttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacacgattaagattaatttca----taggcta 182  Q
    ||||||| ||||||||||| |||||||||| |||||||| |||||||       | ||||||  ||||| | ||||||||||||||||     ||| |      
T  10142332 tttcaatcaattcaagaaagttgacattactatattgatgtaatttatttttttgcaacctttaaaagataagattaagattaatttctctagtagaccc 10142233  T
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||| ||| | |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| || ||| || ||||||||    
T  10142232 attttcaagtaaaatataatttgttttgttatgaaaattatcccaatttattggataataaatatcaccaatatttttaatattagtgaagcacattatt 10142133  T
Q  282 ag 283  Q
    ||    
T  10142132 ag 10142131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 51 - 247
Target Start/End: Original strand, 24611230 - 24611430
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    ||||||||| || |||||||||||||| |||||||  |||||| ||||||||||| |||||| ||| ||||| ||| ||||||       |||| ||| |    
T  24611230 catgatcttccattatcaaattcaattctgcaatcccttcaatcaattcaagaaagttgacaatactatattaataaaatttatttttttggaatctttg 24611329  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||||| ||||||| |||||||      ||||| ||||||||||||| | | |||||||||||||||||||||||||  ||||||||||||||||||||    
T  24611330 aaagacaagattaaggttaatttttctagtaggccaattttcaactaaaatagaatttgttttgttatgaaaattatctcaatttcttggataataaata 24611429  T
Q  247 t 247  Q
    |    
T  24611430 t 24611430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 143 - 263
Target Start/End: Original strand, 42512202 - 42512326
Alignment:
Q  143 aaccttagaaagacacgattaagattaatttcat----aggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggat 238  Q
    |||||| |||||||| |||||||||||||||| |    ||| | |||||||||||| | |||||||||||||||||||||||||||| ||||| ||||||    
T  42512202 aacctttgaaagacaagattaagattaatttctttagtaggttcattttcaactaaaatataatttgttttgttatgaaaattatcccaatttattggat 42512301  T
Q  239 aataaatatcaccaatatttttaat 263  Q
    |||||||||| ||||||||||||||    
T  42512302 aataaatatccccaatatttttaat 42512326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 51 - 361
Target Start/End: Complemental strand, 13957462 - 13957156
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| |||||||||||| | ||||||  || |||| ||||||||||| |||||||||| |||||||| |||||||             || |    
T  13957462 catgatcttgcattatcaaattcaaatatgcaattcttccaatcaattcaagaaagttgacattactatattgatgtaattta-------------tttg 13957376  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||||| ||||||||||| ||||     ||||   |||||||||||| | |||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  13957375 aaagacaagattaagattagtttctctagtaggtctattttcaactaaaatataatttgttttgttacgaaaattatcccaatttattggataataaata 13957276  T
Q  247 tcaccaatatttttaattttggtg-aggacattattaggaac----cccnnnnnnnntatcgctaagttcttcgataataaattttttggcacattatta 341  Q
    |||| ||||||||| || || ||| || ||||||||||||||      |        |||| |||| |||||||||||||| |||| | |||||||||||    
T  13957275 tcactaatatttttcatattagtgaagcacattattaggaacaaagggcccaaaaaatatcactaatttcttcgataataatttttctagcacattatta 13957176  T
Q  342 agaaaaaccaatttatttta 361  Q
    |||| ||||||||| |||||    
T  13957175 agaacaaccaatttttttta 13957156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 3665317 - 3665399
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataattta 133  Q
    |||||||||||| |||||||||||||||||||||| ||||||| ||||||||||| |||||||||| ||||||||||||||||    
T  3665317 catgatcttgcattatcaaattcaattttgcaatcctttcaatcaattcaagaaagttgacattactatattgatataattta 3665399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 76 - 260
Target Start/End: Complemental strand, 21320212 - 21320025
Alignment:
Q  76 ttttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacacgattaagattaatttca 175  Q
    |||| ||||| ||||||| ||||||||||| |||||||||| |||||| |||||||||       |||||||| |||| | | |||||||||||||||      
T  21320212 tttttcaatcctttcaatcaattcaagaaagttgacattactatattggtataatttaattttttggaacctttgaaaaataagattaagattaatttat 21320113  T
Q  176 ----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatattttt 260  Q
        || ||  |||||||||||| | ||||||||||||||||| |||||||||| ||||| |||| ||||||||||||||| |||||||    
T  21320112 ctagtaagcccattttcaactaaaatataatttgttttgttat-aaaattatcctaatttattggttaataaatatcaccattattttt 21320025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 309 - 404
Target Start/End: Complemental strand, 22594235 - 22594136
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaatttattttata--ga--gtgggtataaaaatctttgtgttatacgagagtatatat 404  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||  ||  |||  |||| ||||||||||||||||| |||||||||||    
T  22594235 ttcttcgataataaatttttaggcacattattaagaaaaaccaattttttttataaggaaggtgtatatagaaatctttgtgttatacaagagtatatat 22594136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 9900042 - 9900157
Alignment:
Q  147 ttagaaagacacgattaagattaatttcataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    |||||||| ||  ||||||||||||||  |||||| |||||||||||| | |||||| ||||  ||||||||||||||| |||||||| |||  ||||||    
T  9900042 ttagaaaggcaaaattaagattaatttg-taggctcattttcaactaaaatataattcgtttcattatgaaaattatcccaatttcttagatggtaaata 9900140  T
Q  247 tcaccaatatttttaat 263  Q
    |||||||||||||||||    
T  9900141 tcaccaatatttttaat 9900157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 51337731 - 51337651
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | |||||||||||||||||||||||| ||| ||||| ||||||||||||||||||  |||||||||||    
T  51337731 attttcaactaaaatataatttgttttgttatgaaaattctcccaattttttggataataaatatcacatatatttttaat 51337651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 286
Target Start/End: Original strand, 10373250 - 10373490
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnn-ggaacctta 149  Q
    |||||| ||||| ||| |||||||||||||||||| ||| ||| ||||||||||| |||||||||  ||| ||||||||||||        |||| |||     
T  10373250 catgattttgcattattaaattcaattttgcaatcctttaaatcaattcaagaaagttgacattattataatgatataatttaatttttttggaagcttt 10373349  T
Q  150 gaaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaat 245  Q
     || |||| |||||| ||||||||      ||||   |||||||||||| | |||||||||||| |||| |||||||||  ||||||||| ||||| |||    
T  10373350 aaatgacaagattaaaattaatttttctagtaggtccattttcaactaaaatataatttgttttattat-aaaattatctcaatttcttgtataatgaat 10373448  T
Q  246 atcaccaatatttttaattttggtga-ggacattattaggaa 286  Q
    || ||||||||||||||| || |||| |||||||||| ||||    
T  10373449 atgaccaatatttttaatattagtgagggacattattcggaa 10373490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 3665451 - 3665554
Alignment:
Q  160 attaagattaatttc----ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaata 255  Q
    |||||||||||||||    ||||||| |||||||||||| | | |||||||||||||||||||||||||  ||||||||| ||||||||||||| | |||    
T  3665451 attaagattaatttctctaataggctcattttcaactaaaatagaatttgttttgttatgaaaattatctcaatttcttgaataataaatatcatcgata 3665550  T
Q  256 tttt 259  Q
    ||||    
T  3665551 tttt 3665554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 42511602 - 42511684
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataattta 133  Q
    |||||||||||| |||||||||||| | ||||||| ||||||| ||||||||||| |||| |||||||||||||| |||||||    
T  42511602 catgatcttgcattatcaaattcaactatgcaatcatttcaatcaattcaagaaagttgagattacaatattgatgtaattta 42511684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 10095037 - 10095142
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||| ||| | | |||||| ||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||| ||  || || ||||||||    
T  10095037 attttcaattaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcaatatttttaatattaatgaagcacattatt 10095136  T
Q  282 aggaac 287  Q
    ||||||    
T  10095137 aggaac 10095142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 39480266 - 39480371
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||||||||||||||| |||||||||||||| |||||||  | ||||||||||| || ||| || ||||||||    
T  39480266 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataaaaaatatcgtcgatatttttaatattagtgaagcacattatt 39480365  T
Q  282 aggaac 287  Q
    ||||||    
T  39480366 aggaac 39480371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 424
Target Start/End: Complemental strand, 51758409 - 51758290
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatagagtggg----tataaaaatctttgtgttatacgagagtatatat 404  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |||    |||| ||||||||| | || || || ||||||||    
T  51758409 ttcttcgataataaattttttggcacattattaagaacaactaattttttttatagggagggtgtatatagaaatctttgcgctagaccagggtatatat 51758310  T
Q  405 aacaaatctcgctaaaaggg 424  Q
    | |||||| ||| |||||||    
T  51758309 agcaaatcgcgccaaaaggg 51758290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 6261596 - 6261701
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    ||||| |||||| | | |||||| ||||||||||||||||||| ||||| ||| |||| |||||||| ||||||||||||| || ||| || ||||||||    
T  6261596 atttttaactaaaatagaatttgctttgttatgaaaattatcccaatttattgaataaaaaatatcatcaatatttttaatattagtgaagcacattatt 6261695  T
Q  282 aggaac 287  Q
    ||||||    
T  6261696 aggaac 6261701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 28143470 - 28143575
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||||||||| | ||||||||||||||||||| |||| ||| |||||  |||||||||||||||||  ||||||||||| || || ||  ||||||||    
T  28143470 attttcaactaaaatataatttgttttgttatgagaattctcccaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 28143569  T
Q  282 aggaac 287  Q
    ||||||    
T  28143570 aggaac 28143575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 435
Target Start/End: Original strand, 9922018 - 9922124
Alignment:
Q  332 cacattattaagaaaaaccaatttattttatagagtgggt----ataaaaatctttgtgttatacgagagtatatataacaaatctcgctaaaagggctt 427  Q
    |||||||||||||||||||||||| |||||||| |  |||    ||| |||||||||||||||||||| ||||||||| |||| ||| ||||||||||      
T  9922018 cacattattaagaaaaaccaattt-ttttatagggatggtgtatatagaaatctttgtgttatacgagggtatatatagcaaaactcactaaaagggccg 9922116  T
Q  428 aaaacatt 435  Q
    ||||||||    
T  9922117 aaaacatt 9922124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 283
Target Start/End: Original strand, 29283041 - 29283126
Alignment:
Q  198 ataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg-acattattag 283  Q
    ||||||| ||||||||| |||||||||  ||||||||||||||||||||| |||||||| |||||| || |||||| ||||||||||    
T  29283041 ataatttattttgttat-aaaattatctcaatttcttggataataaatattaccaatatatttaatattagtgaggcacattattag 29283126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 243
Target Start/End: Complemental strand, 25201198 - 25201039
Alignment:
Q  88 ttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacacgattaagattaatttcataggcta----a 183  Q
    |||||| |||| || ||| |||||||||| ||||||||||||||||       ||||| || |||||||| |||||||||||| |||   || |     |    
T  25201198 ttcaatcaattaaaaaaagttgacattactatattgatataatttatttttttggaacttttgaaagacaagattaagattaaattctatggttggtcta 25201099  T
Q  184 ttttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataa 243  Q
    |||| |||||| | ||  |||||||||||||||||||||||| |||||||||||||||||    
T  25201098 tttttaactaaaatatcttttgttttgttatgaaaattatcccaatttcttggataataa 25201039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 286
Target Start/End: Original strand, 23935836 - 23935896
Alignment:
Q  227 aatttcttggataataaatatcaccaatatttttaattttggtgagg-acattattaggaa 286  Q
    ||||||||||||||||||||||||||||||| ||||| || |||||| |||||||||||||    
T  23935836 aatttcttggataataaatatcaccaatattattaatattagtgaggcacattattaggaa 23935896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 9900208 - 9900263
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||| ||||||||    
T  9900208 ttcttcgataataatttttttagcacattattaagaaaacccaattttttttatag 9900263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 7413790 - 7413863
Alignment:
Q  215 gaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattattaggaac 287  Q
    ||||||||||| ||||||||||||||||||||||  | ||||||||||| || ||| || ||||||||||||||    
T  7413790 gaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattattaggaac 7413863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 7459871 - 7459944
Alignment:
Q  215 gaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattattaggaac 287  Q
    ||||||||||| ||||||||||||||||||||||  | ||||||||||| || ||| || ||||||||||||||    
T  7459871 gaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattattaggaac 7459944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 9896427 - 9896484
Alignment:
Q  55 atcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgaca 112  Q
    ||||||||||||||||||||||||||||||| ||||||| || || ||||| ||||||    
T  9896427 atcttgcaatatcaaattcaattttgcaatcctttcaatcaactcgagaaaattgaca 9896484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 14192338 - 14192443
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||| ||||| | || ||||||||||||||||| ||| ||| |||||  |||||||||||||||||  ||||||||||| || || ||  ||||||||    
T  14192338 attttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaatatcacatatatttttaatattagtaagatacattatt 14192437  T
Q  282 aggaac 287  Q
    ||||||    
T  14192438 aggaac 14192443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 352
Target Start/End: Complemental strand, 10142100 - 10142057
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaa 352  Q
    |||||||||||||| |||||||||||||||||||||| ||||||    
T  10142100 ttcttcgataataatttttttggcacattattaagaacaaccaa 10142057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 51890447 - 51890508
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaa 244  Q
    |||||||||||| | ||||||| ||||||||||||||| || | ||||| ||||||||||||    
T  51890447 attttcaactaaaatataatttattttgttatgaaaatgattccaatttattggataataaa 51890508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 51890721 - 51890782
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaa 244  Q
    |||||||||||| | ||||||| ||||||||||||||| || | ||||| ||||||||||||    
T  51890721 attttcaactaaaatataatttattttgttatgaaaatgattccaatttattggataataaa 51890782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 352
Target Start/End: Original strand, 29283160 - 29283199
Alignment:
Q  312 ttcgataataaattttttggcacattattaagaaaaaccaa 352  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  29283160 ttcgataataa-ttttttggcacattattaagaaaaaccaa 29283199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 56366890 - 56366966
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttt 259  Q
    |||||||||||| | ||  |||||||||||| ||| ||| ||  |||||||| |||||||||||| |||||||||||    
T  56366890 attttcaactaaaatatcgtttgttttgttacgaagattctcacaatttcttagataataaatattaccaatatttt 56366966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 355
Target Start/End: Complemental strand, 52458973 - 52458927
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaattt 355  Q
    ||||||||| ||||||||||  ||||||||||||||| |||||||||    
T  52458973 ttcttcgatgataaatttttgagcacattattaagaacaaccaattt 52458927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 355
Target Start/End: Complemental strand, 52460230 - 52460184
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaattt 355  Q
    ||||||||| ||||||||||  ||||||||||||||| |||||||||    
T  52460230 ttcttcgatgataaatttttgagcacattattaagaacaaccaattt 52460184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 9896371 - 9896407
Alignment:
Q  19 gaaatgatcatgaatgtgtctcacatcggtttcatga 55  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  9896371 gaaataatcatgaatgcgtctcacatcggtttcatga 9896407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 6e-81; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 51 - 283
Target Start/End: Complemental strand, 29714027 - 29713794
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||       |||||| |||    
T  29714027 catgatcttgcaatattaaattcaattttgcaatcctttcaatcaattcaagaaatttgacattacaatattgatataatttatttttttggaaccatag 29713928  T
Q  151 aaagacacgattaagattaatttcataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcac 250  Q
    ||||||| |||||||||||||||| |||||| |||||||||||| | |||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  29713927 aaagacaagattaagattaatttcgtaggctcattttcaactaaaatataatttgttttgttatgaaaattatcccaatttcttagataataaatatcac 29713828  T
Q  251 caatatttttaattttggtgagg-acattattag 283  Q
    ||||||||||||| || |||||| ||||||||||    
T  29713827 caatatttttaatattagtgaggcacattattag 29713794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 51 - 435
Target Start/End: Original strand, 10992954 - 10993345
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnngg-aacctta 149  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||       || ||   ||    
T  10992954 catgatcttgcaatatcaaattcaattttgcaatcctttcaatcaattcaagaaagttgacattacaatattgatataatttatttttttgggaagggta 10993053  T
Q  150 gaaagacacgattaagattaatttcataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatca 249  Q
    |||||||| || ||| ||||||||| |||||| |||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10993054 gaaagacaagaataaaattaatttcgtaggctcattttcaactaaaatgaaatttgttttgttatgaaaattatccaaatttcttggataataaatatca 10993153  T
Q  250 ccaatatttttaattttggtgagg-acattattaggaacc-----ccnnnnnnnntatcgctaagttcttcgataataaattttttggcacattattaag 343  Q
    |||||||||||||| || |||||| ||||||||||||||      ||        |||| | || || ||| |||||||||||||||| |||||||||||    
T  10993154 ccaatatttttaatattagtgaggcacattattaggaacaaaaggcctaaaaaaatatctccaatttattctataataaattttttgg-acattattaag 10993252  T
Q  344 aaaaaccaatttattttata--gagtgggtataaaaatctttgtgttatacgagagtatatataacaaatctcgctaaaagggcttaaaacatt 435  Q
    |||||||||||| |||||||  ||| | ||||| | |  ||||||||||| ||  ||||||||   ||||||||| |||||||| |||| ||||    
T  10993253 aaaaaccaattt-ttttatagggagggtgtatatagaaatttgtgttatatgatggtatatatggaaaatctcgccaaaagggcctaaagcatt 10993345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 51 - 286
Target Start/End: Complemental strand, 47185190 - 47184950
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||| ||| | |||||||||||| | ||||||| ||||||| ||||||||||| |||||||||  |||||||| ||||||        |||||||| |    
T  47185190 catgattttgtactatcaaattcaactatgcaatcatttcaatcaattcaagaaagttgacattattatattgatgtaatttgtttttttggaacctttg 47185091  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||||| ||||||||||||||||     | ||   |||||||||||| | |||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  47185090 aaagacaagattaagattaatttctctagtgggtccattttcaactaaaatataatttgttttgttatgaaaattatcccaatttattggataataaata 47184991  T
Q  247 tcaccaatatttttaattttggtg-aggacattattaggaa 286  Q
    |||||||||||| |||| || ||| || |||||||||||||    
T  47184990 tcaccaatatttgtaatattagtgaagaacattattaggaa 47184950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 51 - 422
Target Start/End: Original strand, 44663219 - 44663584
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||   ||| ||  | |  ||         | ||||||||    
T  44663219 catgatcttgcaatatcaaatttaattttgcaatcctttcaatcaattcaagaaatttgacat---aattttttttttttt---------gtaaccttag 44663306  T
Q  151 aaagacacgattaagattaatttcataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcac 250  Q
    ||||||| |||||| | ||||||  |||||| |||||||||||| | ||||||||||||||| ||||||||||   ||||||||||||||||||||||||    
T  44663307 aaagacaagattaaaaataattttgtaggctcattttcaactaaaatataatttgttttgttttgaaaattatttcaatttcttggataataaatatcac 44663406  T
Q  251 caatatttttaattttggtgagg-acattattaggaacc-----ccnnnnnnnntatcgctaagttcttcgataataaattttttggcacattattaaga 344  Q
    |||||| |||||| || |||||| ||||||||||||||      ||        |||||  || |||||| ||||||||||||||| |||||||||||||    
T  44663407 caatatatttaatattagtgaggcacattattaggaacaagtgacccaaaaaaatatcgtcaatttcttcaataataaattttttgtcacattattaaga 44663506  T
Q  345 aaaaccaatttattttatagagtgggtataaaaatctttgtgttatacgagagtatatataacaaatctcgctaaaag 422  Q
    | ||  ||   || |    | ||   |||| |||||||||||||||||||||||||||||||||||| |||| |||||    
T  44663507 agaagaaaaaaatataggggggtatatatagaaatctttgtgttatacgagagtatatataacaaatttcgcaaaaag 44663584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 51 - 273
Target Start/End: Original strand, 11639871 - 11640097
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||| |||| |||||||||||||| || ||||||| ||||||| ||||||||||| ||||||||||  |||||||||||||||       |||| ||| |    
T  11639871 catgttcttacaatatcaaattcagttatgcaatcctttcaataaattcaagaaaattgacattactgtattgatataatttatttttttggaatctttg 11639970  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||||   |||||| ||||||||     ||||   |||||||||||| | | ||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  11639971 aaagactatattaaggttaatttctcaagtaggtccattttcaactaaaataaaatttattttgttatgaaaattatcccaatttcttgaataataaata 11640070  T
Q  247 tcaccaatatttttaattttggtgagg 273  Q
    ||| | ||||||||||| || ||||||    
T  11640071 tcatcgatatttttaatattagtgagg 11640097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 51 - 263
Target Start/End: Original strand, 30191048 - 30191264
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataattt-annnnnnnggaacctta 149  Q
    |||||| | ||| |||||||||||||||||||||| ||| ||| ||||||||||| |||||||||| ||| | ||||||||| |       ||||| ||     
T  30191048 catgatttagcattatcaaattcaattttgcaatccttttaatcaattcaagaaagttgacattactataattatataatttaatttttttggaacattt 30191147  T
Q  150 gaaagacacgattaagattaatttc----ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaat 245  Q
    ||||||||  |||||||||||||||     |||||  |||||||||||| | ||||||| ||||||||| |||||||||  ||||| |||||||||||||    
T  30191148 gaaagacaacattaagattaatttctctagtaggcctattttcaactaaaatataatttcttttgttat-aaaattatctcaattttttggataataaat 30191246  T
Q  246 atcaccaatatttttaat 263  Q
    || || ||||| ||||||    
T  30191247 atgactaatatatttaat 30191264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 287
Target Start/End: Original strand, 44663167 - 44663444
Alignment:
Q  20 aaatgatcatgaatgtgtctcacatcggttt---------------------catgatcttgcaatatcaaattcaattttgcaatcttttcaattaatt 98  Q
    ||||||||| |||| ||||||||||||||||                     |||||||||||||||||||||| |||||||||||| ||||||| ||||    
T  44663167 aaatgatcaagaatatgtctcacatcggtttcatgataatgaatacgtctcgcatgatcttgcaatatcaaatttaattttgcaatcctttcaatcaatt 44663266  T
Q  99 caagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacacgattaagattaatttcataggctaattttcaactaagaaa 198  Q
    |||||||||||||||   ||| ||  | |  |||        | ||||||||||||||| |||||| | ||||||  |||||| |||||||||||| | |    
T  44663267 caagaaatttgacat---aatttt--tttttttt-------tgtaaccttagaaagacaagattaaaaataattttgtaggctcattttcaactaaaata 44663354  T
Q  199 taatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg-acattattaggaac 287  Q
    |||||||||||||| ||||||||||   |||||||||||||||||||||||||||||| |||||| || |||||| ||||||||||||||    
T  44663355 taatttgttttgttttgaaaattatttcaatttcttggataataaatatcaccaatatatttaatattagtgaggcacattattaggaac 44663444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 54 - 273
Target Start/End: Complemental strand, 12893273 - 12893049
Alignment:
Q  54 gatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataattta-nnnnnnnggaaccttagaa 152  Q
    ||||||||| |||||||||||||| ||||||| ||| ||| ||||||||||| |||||||||| || |||||||||||||        ||||  || |||    
T  12893273 gatcttgcattatcaaattcaattatgcaatccttttaatcaattcaagaaagttgacattactatgttgatataatttattttttttggaatatttgaa 12893174  T
Q  153 agacacgattaagattaatttc----ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatc 248  Q
    ||| | |||||| |||||||||     ||||   |||||||||||| | | ||| |||||| |||| |||||||||  |||||||||||||||||| |||    
T  12893173 agataagattaaaattaatttctctagtaggtccattttcaactaaaatagaatatgttttcttataaaaattatctcaatttcttggataataaacatc 12893074  T
Q  249 accaatatttttaattttggtgagg 273  Q
    |||||||| |||||| || ||||||    
T  12893073 accaatatatttaatattagtgagg 12893049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 51 - 246
Target Start/End: Complemental strand, 1424918 - 1424721
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||| | ||| |||||||||||||||||||||| |||  || ||||| ||||| |||||||||| |||  |||||||||||       |||||||| |    
T  1424918 catgatttagcattatcaaattcaattttgcaatcctttttatcaattctagaaagttgacattactataacgatataatttaattttttggaacctttg 1424819  T
Q  151 aaagacacgattaagattaatttc----ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    | |||||  |||||||||||||||     |||||  |||||||||||| | || |||| ||||||||| |||||||||| ||||||||||||||||||||    
T  1424818 atagacaacattaagattaatttctctagtaggcctattttcaactaaaatat-attttttttgttat-aaaattatcccaatttcttggataataaata 1424721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 10994164 - 10994269
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | |||||||| ||||||||||||||||||| ||||||||||||||||||||||  | ||||||||||| || | | || ||||||||    
T  10994164 attttcaactaaaatataatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagcgaagcacattatt 10994263  T
Q  282 aggaac 287  Q
    ||||||    
T  10994264 aggaac 10994269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 53472256 - 53472134
Alignment:
Q  141 ggaaccttagaaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttgg 236  Q
    |||||||| |||| ||| |||||||||||||||      |||||| |||||||||||| | ||||||||||||||||| |||||||||  ||||||||||    
T  53472256 ggaacctttgaaatacatgattaagattaatttatgtagtaggctcattttcaactaaaatataatttgttttgttattaaaattatctcaatttcttgg 53472157  T
Q  237 ataataaatatcaccaatatttt 259  Q
    ||||||||| |||||||| ||||    
T  53472156 ataataaatttcaccaatttttt 53472134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 364
Target Start/End: Complemental strand, 1698508 - 1698321
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||| | | | |||||||||||||| ||||||||||  ||||||||||||||||||||||| | ||||||||||| || ||| || ||||||||    
T  1698508 attttcaacttaaatagaatttgttttgttaggaaaattatctcaatttcttggataataaatatcatcgatatttttaatattagtgaagcacattatt 1698409  T
Q  282 aggaac-----cccnnnnnnnntatcgctaagttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
    || |||     |||        |||| |||| ||||||||||||||||| ||| ||| |||||||| || ||||||||| ||||||||    
T  1698408 agaaacaaaggccccaaaaaaatatcactaatttcttcgataataaattctttagcatattattaataacaaccaattttttttatag 1698321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 272
Target Start/End: Original strand, 3918003 - 3918235
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataattta------nnnnnnnggaa 144  Q
    |||||||||||| |||||||||||||| | ||||  ||||||| ||||||||||| |||||||||| ||||||||||||||||             ||||    
T  3918003 catgatcttgcattatcaaattcaattattcaattctttcaatcaattcaagaaagttgacattactatattgatataatttaattttttttttttggaa 3918102  T
Q  145 ccttagaaagacacgattaagattaatt----tcataggctaattttcaactaagaaataatttgttttgttatgaaaattat-ccaaatttcttggata 239  Q
     ||| ||||||||  |||||||| ||||    |  || ||  |||||||||||| | | ||||||||||||||||| |||||| |||| ||| ||||||     
T  3918103 tctttgaaagacaatattaagataaatttatcttgtaagcatattttcaactaaaatagaatttgttttgttatgagaattatcccaacttttttggatg 3918202  T
Q  240 ataaatatcaccaatatttttaattttggtgag 272  Q
    |||||||||||||| ||||||||| || |||||    
T  3918203 ataaatatcaccaacatttttaatattagtgag 3918235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 19157182 - 19157077
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | ||||||||||||||||||||||||||  |||||||||||||||||||||  | ||||||||||| ||  || || ||||||||    
T  19157182 attttcaactaaaatagaatttgttttgttatgaaaattatcctcatttcttggataataaatatcgtcgatatttttaatattaatgaagcacattatt 19157083  T
Q  282 aggaac 287  Q
    ||||||    
T  19157082 aggaac 19157077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 27941531 - 27941611
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | | |||||| ||||||||||||||||||| ||||||||||||||||||||||  | |||||||||||    
T  27941531 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcttcgatatttttaat 27941611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 285
Target Start/End: Original strand, 53076983 - 53077086
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||| ||||||||||| ||||||||||||||||||||||  | ||||||||||| || ||| || ||||||||    
T  53076983 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 53077082  T
Q  282 agga 285  Q
    ||||    
T  53077083 agga 53077086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 17147291 - 17147218
Alignment:
Q  198 ataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag 272  Q
    ||||||| ||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||| || |||||    
T  17147291 ataatttattttgttatgaaa-ttattccaatttcttggataataaatatcaccaatatttttaatattagtgag 17147218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 143 - 249
Target Start/End: Complemental strand, 4127656 - 4127547
Alignment:
Q  143 aaccttagaaagacacgattaagattaatttca-tagg---ctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggat 238  Q
    |||||| |||||||| ||||||||||||||||  |||    ||||||||||||||| ||||| ||||||| |||| ||||||||||  ||||||||||||    
T  4127656 aacctttgaaagacaagattaagattaatttctgtagcaatctaattttcaactaaaaaatactttgttt-gttaagaaaattatctcaatttcttggat 4127558  T
Q  239 aataaatatca 249  Q
    |||||||||||    
T  4127557 aataaatatca 4127547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 23044911 - 23044991
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | |||||||||||||||||||||||| ||| |||||  |||||||||||||||||  || ||||||||    
T  23044911 attttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacatatctttttaat 23044991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 25071732 - 25071628
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| | ||||||||||||||||  ||||||||||||||||||||||  | ||||||||||| || ||| || ||||||||    
T  25071732 attttcaactaaaatagaatttgctctgttatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattatt 25071633  T
Q  282 aggaa 286  Q
    |||||    
T  25071632 aggaa 25071628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 15760948 - 15760869
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaa 262  Q
    |||||||||||| | | |||||| | ||||||||||||||||| ||||||||||||||||||||||  | ||||||||||    
T  15760948 attttcaactaaaataaaatttgctatgttatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaa 15760869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 31884971 - 31885076
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||||||||| | ||||||| ||||||||||| |||| ||| |||||  |||||||||||||||||  ||||||||||| || || ||  ||||||||    
T  31884971 attttcaactaaaatataatttattttgttatgagaattttcccaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 31885070  T
Q  282 aggaac 287  Q
    ||||||    
T  31885071 aggaac 31885076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 391
Target Start/End: Complemental strand, 17147206 - 17147131
Alignment:
Q  315 gataataaattttttggcacattattaagaaaaaccaatttattttatagagtgggtataaaaatctttgtgttata 391  Q
    |||||||| |||||||||||||||||| ||||||||||||| |||||||| | ||||||| |||| |||||| ||||    
T  17147206 gataataatttttttggcacattattaggaaaaaccaattt-ttttatagggagggtatataaatatttgtgatata 17147131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 51 - 133
Target Start/End: Complemental strand, 46947614 - 46947532
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataattta 133  Q
    |||||||||||| |||||||||||||| ||||||||||||||| ||   |||||| ||| || ||| ||||| ||||||||||    
T  46947614 catgatcttgcattatcaaattcaattatgcaatcttttcaatcaaactaagaaagttgccactactatattaatataattta 46947532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 16876891 - 16876968
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | || |||||||||||||| |||||| ||  ||||||||||||||||||||| |||||||| ||||||    
T  16876891 attttcaactaaaatattatttgttttgttat-aaaattctc--aatttcttggataataaatatgaccaatatatttaat 16876968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 6024780 - 6024860
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||| ||||| | || ||||||||||||||||| ||| ||| |||||  |||||||||||||||||  |||||||||||    
T  6024780 attttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaatatcacatatatttttaat 6024860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 6584058 - 6583978
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | ||||||| ||||||  |||| ||| |||||||||  |||||| |||||||||| ||||||||||||    
T  6584058 attttcaactaaaatataatttattttgtggtgaagattctccaaattttatggatattaaatatcacaaatatttttaat 6583978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 355
Target Start/End: Complemental strand, 1424655 - 1424609
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaattt 355  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||||    
T  1424655 ttctttgataataatttttttggcacatttttaagaaaaaccaattt 1424609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 40145552 - 40145454
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg-acattatt 281  Q
    ||||| |||||| | ||||||||||||||||| |||||| |||||||| |||||||||||||||| | |||| | |||||| || |||||| ||||||||    
T  40145552 attttgaactaaaatataatttgttttgttat-aaaatt-tccaaatt-cttggataataaatatgaacaatgtatttaatgttagtgaggcacattatt 40145456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 9467477 - 9467552
Alignment:
Q  184 ttttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttt 259  Q
    ||||||||||| | ||  |||||||||||| ||| ||| ||  |||||||| |||||||||||| |||||||||||    
T  9467477 ttttcaactaaaatatcgtttgttttgttacgaagattctcacaatttcttagataataaatattaccaatatttt 9467552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 25071600 - 25071545
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
    ||||||||||||||||||||  ||| ||||| ||||| ||||||||| ||||||||    
T  25071600 ttcttcgataataaatttttgagcatattatcaagaacaaccaattttttttatag 25071545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 352
Target Start/End: Original strand, 30191314 - 30191357
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaa 352  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||    
T  30191314 ttcttcgataataaagtttctggcacattagtaagaaaaaccaa 30191357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 33443639 - 33443564
Alignment:
Q  184 ttttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttt 259  Q
    ||||||||||| | ||  |||||||||||| ||| ||| ||  |||||||| |||||||||||| |||||||||||    
T  33443639 ttttcaactaaaatatcgtttgttttgttacgaagattctcacaatttcttagataataaatattaccaatatttt 33443564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 47184922 - 47184868
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
    |||||||||||||| |||||||| |||||||||| || |||||| |||||||||||    
T  47184922 ttcttcgataataa-ttttttggtacattattaaaaacaaccaaattattttatag 47184868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 52448215 - 52448152
Alignment:
Q  200 aatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||| ||||| |||||||||||   ||||||||||||||||||||||  | |||||||||||    
T  52448215 aatttgctttgtaatgaaaattatatcaatttcttggataataaatatcgtcgatatttttaat 52448152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 11830382 - 11830428
Alignment:
Q  64 tatcaaattcaattttgcaatcttttcaattaattcaagaaatttga 110  Q
    |||||||||||||||||||||| ||| ||| ||||||||||| ||||    
T  11830382 tatcaaattcaattttgcaatccttttaatcaattcaagaaagttga 11830428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 345
Target Start/End: Complemental strand, 4127290 - 4127254
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaa 345  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  4127290 ttcttcgataatcaattttttgacacattattaagaa 4127254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 9e-71; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 51 - 431
Target Start/End: Complemental strand, 5771091 - 5770710
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||||||  ||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||       |||| |||||    
T  5771091 catgatcttgcaatactaaattcatttttgcaatcctttcaatcaattcaagaaatttgacattacaatattgatataatttactcttttggaaacttag 5770992  T
Q  151 aaagacacgattaagattaatttcataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcac 250  Q
    ||||||| |||||| ||||||||| |||||| |||||||||||| | ||||||| ||||  ||       ||||| ||||||||||||||||||||||||    
T  5770991 aaagacaagattaatattaatttcgtaggctcattttcaactaaaatataatttatttttata-------tatcccaatttcttggataataaatatcac 5770899  T
Q  251 caatatttttaattttggtgag-gacattattaggaac-----cccnnnnnnnntatcgctaagttcttcgataataaattttttggcacattattaaga 344  Q
    ||||||||||||| || |||||  ||||||||||||||      ||        |||||| || ||||||||||||||||||||||||||||||||||||    
T  5770898 caatatttttaatattagtgagacacattattaggaacaaagggcccataaaaatatcgccaatttcttcgataataaattttttggcacattattaaga 5770799  T
Q  345 aaaaccaatttattttataga----gtgggtataaaaatctttgtgttatacgagagtatatataacaaatctcgctaaaagggcttaaaa 431  Q
    |||||||| || |||| ||||    |||  |||| |||||||||||||||||||| |  ||||||| ||||||||| |||||||| |||||    
T  5770798 aaaaccaaatttttttgtagaaagggtgtatatagaaatctttgtgttatacgaggg--tatataataaatctcgccaaaagggcctaaaa 5770710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 51 - 287
Target Start/End: Complemental strand, 21863823 - 21863583
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||| | |||||||||||||||||||||| ||||||| ||||||| ||| ||||||||||  |||| ||||||||||       |||| ||| |    
T  21863823 catgatcttggattatcaaattcaattttgcaatcatttcaatcaattcaaaaaagttgacattactttattaatataatttatttttt-ggaatctttg 21863725  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    || |||| ||||||||||||||||     | ||   |||||||||||| | |||||||| ||||||||||||||||||  ||||||||| ||||||||||    
T  21863724 aaggacatgattaagattaatttctctacttggtccattttcaactaaaatataatttgctttgttatgaaaattatctcaatttcttgaataataaata 21863625  T
Q  247 tcaccaatatttttaattttggtgagg-acattattaggaac 287  Q
    ||||||||||||||||| || ||| || ||||||||||||||    
T  21863624 tcaccaatatttttaatattagtggggcacattattaggaac 21863583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 51 - 259
Target Start/End: Complemental strand, 9420680 - 9420468
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| ||| |||||||||| ||||||||||| ||| ||||||||||| |||||||||| | ||||||||||||||       |||| |||      
T  9420680 catgatcttgcattattaaattcaattctgcaatctttttaatcaattcaagaaagttgacattactacattgatataatttatttttttggaatcttta 9420581  T
Q  151 aaagacacgattaagattaatttc-atagg---ctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||||| ||||||||||| ||||  ||||   || |||||||||||| | | ||||| ||||||||||||||| |||| |||||||||||||||||||     
T  9420580 aaagacaagattaagattattttctctaggaaactcattttcaactaaaataaaatttattttgttatgaaaataatcctaatttcttggataataaatt 9420481  T
Q  247 tcaccaatatttt 259  Q
    ||| |||||||||    
T  9420480 tcaacaatatttt 9420468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 58 - 285
Target Start/End: Complemental strand, 40934266 - 40934035
Alignment:
Q  58 ttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagaca 157  Q
    ||||| |||||||| |||||||| ||| |||| ||| |||| |||||| |||||||||| ||| |||||||||||        | |||||| ||||||||    
T  40934266 ttgcattatcaaatccaattttgaaatttttttaatcaattgaagaaagttgacattactataatgatataatttcattttttgtaacctttgaaagaca 40934167  T
Q  158 cgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaa 253  Q
     ||||||||||||||||     ||  |  | |||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||    
T  40934166 agattaagattaatttctccagtatacccaatttcaactaaaacataatttgttttgttat-aaaattatccaaatttcttggataataaatatgatcaa 40934068  T
Q  254 tatttttaattttggtgag-gacattattagga 285  Q
    |||||||||| || |||||  ||||||||||||    
T  40934067 tatttttaatattagtgagacacattattagga 40934035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 198 - 286
Target Start/End: Original strand, 41822165 - 41822254
Alignment:
Q  198 ataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg-acattattaggaa 286  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||| |||||||||||||    
T  41822165 ataatttattttgttatgaaaattatccaaatttcttggataataaatatcatcaatatttttaatattagtgaggcacattattaggaa 41822254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 51 - 263
Target Start/End: Original strand, 8113794 - 8114008
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    ||||||||| || |||||||||||| | ||||||| ||||||| ||||| ||||| |||||||||| ||||| || |||||||        ||||||| |    
T  8113794 catgatcttccattatcaaattcaactatgcaatcctttcaatcaattcgagaaaattgacattactatattaatgtaatttatttttttagaacctttg 8113893  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||| |  |||||||||||| ||     |||| | |||||||||||| | ||||||||||  ||||||||||||| || || || ||||||||||||||    
T  8113894 aaagaaaatattaagattaatatctgtagtaggtttattttcaactaaaatataatttgtt--gttatgaaaattaccccaacttattggataataaata 8113991  T
Q  247 tcaccaatatttttaat 263  Q
    |||||||||||||||||    
T  8113992 tcaccaatatttttaat 8114008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 24441942 - 24442047
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat-tttggtgaggacattatt 281  Q
    ||||||||| || | ||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| || | |||| ||||||||    
T  24441942 attttcaacaaaaatataatttgttttgttattaaaattatcccaatttattggataataaatatcaccaatatttttaatattagttgagcacattatt 24442041  T
Q  282 aggaac 287  Q
    ||||||    
T  24442042 aggaac 24442047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 142 - 287
Target Start/End: Original strand, 43179395 - 43179544
Alignment:
Q  142 gaaccttagaaagacacgattaagattaatttc----ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttgga 237  Q
    ||||||| |||||| | |||||||||||||||     |||| || ||||| |||||| | ||||||||||||||||| |||||||||| |||||||||||    
T  43179395 gaacctttgaaagataagattaagattaatttttttaatagactcatttttaactaaaatataatttgttttgttat-aaaattatcccaatttcttgga 43179493  T
Q  238 taataaatatcaccaatatttttaattttggtgagg-acattattaggaac 287  Q
    ||||||||||||||| |||||| ||| || |||||| ||||||||||||||    
T  43179494 taataaatatcaccagtattttcaatattagtgaggtacattattaggaac 43179544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 39038906 - 39039010
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg-acattatt 281  Q
    ||||| |||||| | |||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| || |||||| |||||||     
T  39038906 atttttaactaaaatataatttgttttgttacgaaaattatcccaatttcttggacaataaatatcaccaatatttttaatattagtgaggcacattatg 39039005  T
Q  282 aggaa 286  Q
    |||||    
T  39039006 aggaa 39039010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 51 - 263
Target Start/End: Original strand, 45445948 - 45446162
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| |||||||||||||| | ||||||||| ||||||||| |||||  | ||||||| |||||||||||||||        |||||||| |    
T  45445948 catgatcttgcattatcaaattcaattctacaatctttttaattaattcgagaaagctaacattactatattgatataattt-tttttttggaacctttg 45446046  T
Q  151 aaagacacgattaagattaatttc----ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||| | |||||| |||||||||     ||||| ||||||||||||| | |||||||||||| |||| || |||||   |||||||||||| || ||||    
T  45446047 aaagaaaagattaaaattaatttctctagtaggccaattttcaactaaaatataatttgttttcttataaatattatttcaatttcttggatgat-aata 45446145  T
Q  247 tcaccaatatttttaat 263  Q
    | | |||||||||||||    
T  45446146 tgatcaatatttttaat 45446162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 29636906 - 29636986
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | ||||||||||||||| |||||||||||| ||||| ||||||||||||||||| |||||||||||||    
T  29636906 attttcaactaaaatataatttgttttgttttgaaaattatcccaatttattggataataaatatcatcaatatttttaat 29636986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 28460258 - 28460337
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | || |||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28460258 attttcaactaaaatatcatttgttttgttaa-aaaattatccaaacttcttggataataaatatcaccaatatttttaat 28460337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 176 - 283
Target Start/End: Original strand, 35118256 - 35118360
Alignment:
Q  176 taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgaggac 275  Q
    |||||| |||||||||||| | ||||||||||||||||| |||||| ||  ||||| ||||||||||||||| |||||||| |||||| || |||||||     
T  35118256 taggcttattttcaactaaaatataatttgttttgttat-aaaattctc--aatttattggataataaatatgaccaatatatttaatattagtgaggaa 35118352  T
Q  276 attattag 283  Q
    ||||||||    
T  35118353 attattag 35118360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 51 - 259
Target Start/End: Complemental strand, 44733858 - 44733649
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    ||||||||| || |||||||||||| ||||||||| ||||||| ||||||| ||| || ||||||| ||||||||| ||   |       |||| ||| |    
T  44733858 catgatcttacattatcaaattcaaatttgcaatcctttcaatcaattcaaaaaagtttacattactatattgata-aaaaaaaaaaattggaatctttg 44733760  T
Q  151 aaagacacgattaagattaatttc---ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatat 247  Q
    ||||||| ||||||  ||||||||    |||||| ||||||||||||   | ||||| |||||||||||||||||| |  ||||||||||||||||||||    
T  44733759 aaagacaagattaaagttaatttcttagtaggctcattttcaactaaattagaatttattttgttatgaaaattat-ctcatttcttggataataaatat 44733661  T
Q  248 caccaatatttt 259  Q
    || | |||||||    
T  44733660 catcgatatttt 44733649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 8069660 - 8069577
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaatttt 266  Q
    |||||||||||| | ||||||||||||||||||| |||| ||| |||||  |||||||||||||||||  ||||||||||||||    
T  8069660 attttcaactaaaatataatttgttttgttatgagaattctcccaattttctggataataaatatcacatatatttttaatttt 8069577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 285
Target Start/End: Original strand, 31072539 - 31072642
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||| ||||||||||| ||||||||||||||||||||||  | ||||||||||| || ||| || ||||||||    
T  31072539 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 31072638  T
Q  282 agga 285  Q
    ||||    
T  31072639 agga 31072642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 48238539 - 48238457
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattt 265  Q
    |||||||||||| | |||||||||||||||||||||||| | | |||||  |||||||||||||||||  |||||||||||||    
T  48238539 attttcaactaaaatataatttgttttgttatgaaaattcttccaattttctggataataaatatcacatatatttttaattt 48238457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 8389314 - 8389419
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| |||||||||||||||||||  |||||||||||||||||||||  | ||||||||||| ||  || || ||||||||    
T  8389314 attttcaactaaaatagaatttgctttgttatgaaaattatcctcatttcttggataataaatatcgtcgatatttttaatattaatgaagcacattatt 8389413  T
Q  282 aggaac 287  Q
    ||||||    
T  8389414 aggaac 8389419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 48636782 - 48636677
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||||||||| | ||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||   |||||||||| || || ||  ||||||||    
T  48636782 attttcaactaaaatataatttgtttggttatgaaaattctcccaattttttggataataaatatcacatgtatttttaatattagtaagacacattatt 48636683  T
Q  282 aggaac 287  Q
    ||||||    
T  48636682 aggaac 48636677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 79 - 287
Target Start/End: Original strand, 8604505 - 8604717
Alignment:
Q  79 tgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacacgattaagatta----atttc 174  Q
    ||||||| ||| ||| ||||||||||||||||||||||  ||||||| |||||||       |||||||| |||||||| |||||||||||    || |     
T  8604505 tgcaatcatttaaatcaattcaagaaatttgacattac-ttattgatgtaatttaattttttggaacctttgaaagacaagattaagattaacttatcta 8604603  T
Q  175 ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-agg 273  Q
     ||||  ||||||||| ||| | ||||||| ||| ||||| |||| | ||| | ||| ||||||||||| ||| ||||||||| ||||| || ||| ||     
T  8604604 gtaggtcaattttcaaataaaatataatttatttagttataaaaaatttcccagtttattggataataattatgaccaatattattaatattagtgaagc 8604703  T
Q  274 acattattaggaac 287  Q
    ||||||||||||||    
T  8604704 acattattaggaac 8604717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 3123876 - 3123950
Alignment:
Q  54 gatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatata 128  Q
    ||||||||| |||||||||||||| ||||||| |||| || || |||||||| |||||||||| |||||||||||    
T  3123876 gatcttgcattatcaaattcaattatgcaatcctttccatcaactcaagaaagttgacattactatattgatata 3123950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 6189418 - 6189523
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||||||||| | |||||||||||||||| || |||| ||| |||||  |||||||||||||||||  ||||||||||| || || ||  ||||||||    
T  6189418 attttcaactaaaatataatttgttttgttaagagaattctcccaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 6189517  T
Q  282 aggaac 287  Q
    ||||||    
T  6189518 aggaac 6189523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 20394800 - 20394880
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    ||||| |||||| | | |||||| ||||||||||||||||||| ||||||||| ||||||||||||  | |||||||||||    
T  20394800 attttgaactaaaatagaatttgctttgttatgaaaattatcccaatttcttgaataataaatatcgtcgatatttttaat 20394880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 3124289 - 3124352
Alignment:
Q  200 aatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||||||||||| ||||  |||||| |||||||||||||||| | |||||||||||    
T  3124289 aatttgttttgttatgaaaaatatctcaatttcctggataataaatatcatcgatatttttaat 3124352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 36628681 - 36628600
Alignment:
Q  52 atgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataattta 133  Q
    ||||||||||| |||||||||||||| ||||||||||| ||| |||  |||||| |||||| ||  ||||| ||||||||||    
T  36628681 atgatcttgcattatcaaattcaattctgcaatctttttaatcaatctaagaaagttgacactattatattaatataattta 36628600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 1623653 - 1623574
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | | |||||| ||||||| ||||||||||| |||||||||||||||||||||   | |||||||||||    
T  1623653 attttcaactaa-atagaatttgctttgttacgaaaattatcccaatttcttggataataaatattgtcgatatttttaat 1623574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 287
Target Start/End: Complemental strand, 4539938 - 4539850
Alignment:
Q  200 aatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattattaggaac 287  Q
    |||||| | ||||||||||||||||  ||||||||||||||||||||||  | ||||||||||| || ||| || ||||||||| ||||    
T  4539938 aatttgctctgttatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattattatgaac 4539850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 8114062 - 8114113
Alignment:
Q  312 ttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
    ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  8114062 ttcgataataatttttttggcacattattaagaacaaccaattt-ttttatag 8114113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 352
Target Start/End: Original strand, 28460372 - 28460419
Alignment:
Q  305 taagttcttcgataataaattttttggcacattattaagaaaaaccaa 352  Q
    ||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  28460372 taatttcttcgataataatttttttggcacattattaagaacaaccaa 28460419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 35478009 - 35478072
Alignment:
Q  200 aatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||| ||||| ||||||||||||  ||||||||||||||||||||||  | |||||||||||    
T  35478009 aatttgctttgtaatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaat 35478072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 364
Target Start/End: Complemental strand, 18667440 - 18667270
Alignment:
Q  200 aatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg-acattattaggaacc-----ccnnn 293  Q
    |||||| ||||| ||||||||||||  |||||||||||||||||||||   | ||||||||||| || |||| | ||||||||| ||||      ||       
T  18667440 aatttgctttgtaatgaaaattatctcaatttcttggataataaatattgtcgatatttttaatattagtgaagcacattattaagaacaaagggcccag 18667341  T
Q  294 nnnnntatcgctaagttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
         |||| |||| |||||||||||||||||||   ||| ||||||||||| ||||||||| ||||||||    
T  18667340 taaaatatcactaatttcttcgataataaattttcaagcatattattaagaataaccaatttcttttatag 18667270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 309 - 425
Target Start/End: Complemental strand, 4539823 - 4539707
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaatttattttata-gagtgggtataaaaatctttgtgttatacgagagtatatataac 407  Q
    ||||||||||||||||||||  ||| ||||| ||||| ||||||||| ||||||| ||| | ||||| | |  ||||||||| | | || |||||||| |    
T  4539823 ttcttcgataataaatttttgagcatattatcaagaacaaccaattttttttataggagggtgtatatagaaatttgtgttacatggga-tatatatagc 4539725  T
Q  408 aaatctcgctaaaagggc 425  Q
    ||||||| ||||||||||    
T  4539724 aaatctcactaaaagggc 4539707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 23381161 - 23381104
Alignment:
Q  215 gaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag 272  Q
    ||||||||||| ||||| |||||| |||||||||||| ||||||||||| || |||||    
T  23381161 gaaaattatcccaattttttggatgataaatatcaccgatatttttaatattagtgag 23381104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 133
Target Start/End: Original strand, 28460145 - 28460202
Alignment:
Q  76 ttttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataattta 133  Q
    |||||||||| |||| || ||||||||||| |||||||| | ||||||||||||||||    
T  28460145 ttttgcaatcctttcgatcaattcaagaaagttgacattgctatattgatataattta 28460202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 364
Target Start/End: Original strand, 35478114 - 35478179
Alignment:
Q  299 tatcgctaagttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
    |||| |||| |||||||||||||||||||   ||| ||||||||||| ||||||||| ||||||||    
T  35478114 tatcactaatttcttcgataataaattttcaagcatattattaagaacaaccaattttttttatag 35478179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 184 - 261
Target Start/End: Complemental strand, 36628547 - 36628470
Alignment:
Q  184 ttttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatattttta 261  Q
    ||||||||||| | ||  |||||||| ||||||  ||| ||  ||||||||||||||||||||| |||||||||||||    
T  36628547 ttttcaactaaaatatcgtttgtttttttatgatgattctcgcaatttcttggataataaatattaccaatattttta 36628470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 135743 - 135663
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||| ||| | ||||||||||| ||| |||| ||| ||| |||||  |||||||||||||| || ||||||||||||    
T  135743 attttcaattaaaatataatttgtttagttgtgaagattctcccaattttctggataataaatattacaaatatttttaat 135663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 10015748 - 10015824
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttt 259  Q
    |||||||||||| | ||  |||||||||||| ||| ||| ||  |||||||| |||||||||||| |||||||||||    
T  10015748 attttcaactaaaatatcgtttgttttgttacgaagattctcacaatttcttagataataaatattaccaatatttt 10015824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 13754187 - 13754139
Alignment:
Q  200 aatttgttttgttatgaaaattatccaaatttcttggataataaatatc 248  Q
    |||||| ||||| ||||||||||||  ||||||||||||||||||||||    
T  13754187 aatttgctttgtaatgaaaattatctcaatttcttggataataaatatc 13754139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 352
Target Start/End: Original strand, 8604740 - 8604783
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaa 352  Q
    |||||||||||||| |||| ||||||||||||||||| ||||||    
T  8604740 ttcttcgataataatttttctggcacattattaagaacaaccaa 8604783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 37548790 - 37548865
Alignment:
Q  184 ttttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttt 259  Q
    ||||||||||| | ||  |||||||||||| ||| ||| ||  |||||||| |||||||||||| |||||||||||    
T  37548790 ttttcaactaaaatatcgtttgttttgttacgaagattctcacaatttcttagataataaatattaccaatatttt 37548865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 39038803 - 39038850
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaatt 98  Q
    |||||||||||| |||||||||||||| ||||||| ||||||| ||||    
T  39038803 catgatcttgcattatcaaattcaattctgcaatcatttcaatcaatt 39038850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 349
Target Start/End: Original strand, 35118399 - 35118433
Alignment:
Q  315 gataataaattttttggcacattattaagaaaaac 349  Q
    |||||||| ||||||||||||||||||||||||||    
T  35118399 gataataatttttttggcacattattaagaaaaac 35118433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 349
Target Start/End: Complemental strand, 23381054 - 23381021
Alignment:
Q  316 ataataaattttttggcacattattaagaaaaac 349  Q
    ||||||| ||||||||||||||||||||||||||    
T  23381054 ataataatttttttggcacattattaagaaaaac 23381021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 41822282 - 41822334
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaatttatttta 361  Q
    |||||||| ||||| ||||||||| |||||||||||| |||||| || |||||    
T  41822282 ttcttcgacaataatttttttggcgcattattaagaacaaccaaattttttta 41822334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 5e-69; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 78 - 418
Target Start/End: Original strand, 38566113 - 38566457
Alignment:
Q  78 ttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacacgattaagattaatttcata 177  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||        | ||||||||||||||| |||||||||||||||| ||    
T  38566113 ttgcaatcctttcaatcaattcaagaaatttgacattacaatattgatataattt---tttttgaaaccttagaaagacaagattaagattaatttccta 38566209  T
Q  178 ggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtga-ggaca 276  Q
    |||| |||| ||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||| | |||    
T  38566210 ggctcattt-caactaaaatataatttgttttgttatgaaaattatcccaatttcttggataataaatatcaccaatatttttaatattagtgacgcaca 38566308  T
Q  277 ttattaggaac-----cccnnnnnnnntatcgctaagttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatagagtggg- 370  Q
    |||||||||||      ||        ||||||||| |||||||||||||| ||||||| ||||||||||||||||| |||||| |||||||| | |||     
T  38566309 ttattaggaacaaatggcccaaaaaaatatcgctaatttcttcgataataatttttttgacacattattaagaaaaa-caattt-ttttatagggagggt 38566406  T
Q  371 ---tataaaaatctttgtgttatacgagagtatatataacaaatctcgcta 418  Q
       |||| |||||||||||||||| ||| ||| ||||| ||||||| ||||    
T  38566407 gtatatagaaatctttgtgttataggagggtaaatatagcaaatcttgcta 38566457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 52 - 435
Target Start/End: Original strand, 41302329 - 41302718
Alignment:
Q  52 atgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaa-tttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    ||||||||| ||||| |||||||||||| ||||| ||||||| ||||||| ||| ||||||||| | ||||||||||||||||       |||| |||||    
T  41302329 atgatcttgtaatattaaattcaattttacaatcctttcaatcaattcaataaaatttgacattgcgatattgatataatttatttttttggaatcttag 41302428  T
Q  151 aaagacacgattaagattaatttcataggctaattttc-aactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatca 249  Q
    ||||||| ||||||||| |||||| |||||| |||||  |||||| | |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  41302429 aaagacaagattaagatcaatttcgtaggctcatttttgaactaaaatataatttgttttgttatgaaaattatcccaattttttggataataaatatca 41302528  T
Q  250 ccaatatttttaattttggtgagg-acattattaggaac----cccnnnnnnnntatcgctaagttcttcgataataaattttttggcacattattaaga 344  Q
     |||||||| |||| || |||||| ||||||||| ||||      |        |||||| || ||||||||||||||||||||||||||||||| ||||    
T  41302529 acaatatttgtaatattagtgaggcacattattacgaacaaagggccctaaaaatatcgcaaatttcttcgataataaattttttggcacattataaaga 41302628  T
Q  345 aaaaccaatttattttatagagtggg-tataaaaatctttgtgttatacgagagtatatataacaaatctcgctaaaagggcttaaaacatt 435  Q
    |||| ||| || |||||||| | ||| ||||||||||| ||| ||||| ||| ||||||||| ||||||| || |||||||| |||||||||    
T  41302629 aaaatcaaatt-ttttatagggagggttataaaaatctctgt-ttatatgagggtatatatagcaaatcttgccaaaagggcctaaaacatt 41302718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 51 - 287
Target Start/End: Original strand, 19091063 - 19091303
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| |||||||||||||||| ||||| ||||||| |||||| ||||||||||||||| ||||||||||||||||       | |||||| |    
T  19091063 catgatcttgcattatcaaattcaatttttcaatcctttcaatcaattcatgaaatttgacattactatattgatataatttatttttt-gaaacctttg 19091161  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||| | ||||||||||||||||     |||||  |||||||||||| | |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  19091162 aaagataagattaagattaatttctctagtaggcccattttcaactaaaatataatttgttttgttatgaaaattatacaaatttcttagataataaata 19091261  T
Q  247 tcaccaatatttttaattttggtgagg-acattattaggaac 287  Q
    ||||||||||||||||| ||  ||||| ||||||||||||||    
T  19091262 tcaccaatatttttaatattattgaggcacattattaggaac 19091303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 53 - 287
Target Start/End: Complemental strand, 24484696 - 24484460
Alignment:
Q  53 tgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnngg-aaccttaga 151  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||||          ||||  |||    
T  24484696 tgatcttgcaatatcaaattcaattttgcaatgctttcaaccaattcaagaaatttgacattacaatattgatataatttagtaattttttaaccacaga 24484597  T
Q  152 aagacacgattaagattaatttcataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcacc 251  Q
    |||||| |||||||||||||||  | | || |||||||||||| | |||||||||||||||||| |||||||   ||||||||||||||||||||||||     
T  24484596 aagacaagattaagattaattttgttgcctcattttcaactaaaatataatttgttttgttatgtaaattatttcaatttcttggataataaatatcaca 24484497  T
Q  252 aatatttttaattttggtgagg-acattattaggaac 287  Q
    |||||||||||| || || ||| ||||||||||||||    
T  24484496 aatatttttaatattagttaggcacattattaggaac 24484460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 51 - 364
Target Start/End: Complemental strand, 14904249 - 14903927
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| ||||||||||||   ||||||| ||||||| ||||||||||| |||||||||| |||||||| |||||||       | |||||| |    
T  14904249 catgatcttgcattatcaaattcaaccatgcaatcctttcaatcaattcaagaaagttgacattactatattgatgtaatttatttttttgtaacctttg 14904150  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||||| |||||| ||||||||      ||||   |||||||||||| | |||||||||||||| ||||||||||||| ||||  ||||||||||||||    
T  14904149 aaagacaagattaaaattaatttttctagtaggtctattttcaactaaaatataatttgttttgtcatgaaaattatcctaattcattggataataaata 14904050  T
Q  247 tcaccaatatttttaattttggtg-aggacattattaggaa-----ccccnnnnnnnntatcgctaagttcttcgataataaattttttggcacattatt 340  Q
    |||| |||||||||||| || ||| || |||||||||||||       ||        |||| | || |||||||||||||| |||||||||||||||||    
T  14904049 tcacgaatatttttaatattagtgaagcacattattaggaataatgggcccaaaaaaatatcacaaatttcttcgataataatttttttggcacattatt 14903950  T
Q  341 aagaaaaaccaatttattttatag 364  Q
    ||||| ||||||||| ||||||||    
T  14903949 aagaacaaccaattt-ttttatag 14903927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 76 - 287
Target Start/End: Complemental strand, 30387053 - 30386838
Alignment:
Q  76 ttttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacacgattaagattaatttca 175  Q
    |||||||||| ||||||| ||||||||||| |||||||||| ||||||||||||||||       ||||||||  ||||||| |||||||||||||||      
T  30387053 ttttgcaatcctttcaatgaattcaagaaagttgacattactatattgatataatttaattttttggaacctttaaaagacaagattaagattaatttat 30386954  T
Q  176 ----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtga 271  Q
        || ||  ||||| |||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||| || ||||    
T  30386953 ctagtaagcccatttttaactaaaatataatttgttttgttat-aaaattatcctaatttcttggataataaatatcaccgatatttttaatattagtga 30386855  T
Q  272 g-gacattattaggaac 287  Q
    |  ||||||||||||||    
T  30386854 gacacattattaggaac 30386838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 64 - 287
Target Start/End: Complemental strand, 10023122 - 10022894
Alignment:
Q  64 tatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacacgatta 163  Q
    ||||||||||||||  |||||| ||||| | ||||||||||| |||||||||  |||| ||||||||||        | ||||||  ||||||| |||||    
T  10023122 tatcaaattcaattacgcaatcatttcattcaattcaagaaagttgacattattatatagatataatttgtttttttgaaacctttaaaagacatgatta 10023023  T
Q  164 agattaatttca-taggctaat---tttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttt 259  Q
    |||||||||||  |||   ||    |||||||||| | ||| |||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||    
T  10023022 agattaatttctctagtaaaaccactttcaactaaaatatattttgttttgttatgaaaattatctcaatttcttggataataaatatccccaatatttt 10022923  T
Q  260 taattttggtgagg-acattattaggaac 287  Q
    | || || |||||| ||||||||||||||    
T  10022922 ttatattagtgaggcacattattaggaac 10022894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 33054862 - 33054757
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | |||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||| || ||| || ||||||||    
T  33054862 attttcaactaaaatataatttgttttgttatgaaaattatcataatttattggataataaatatcaccaatatttttaatattagtgaagcacattatt 33054763  T
Q  282 aggaac 287  Q
    ||||||    
T  33054762 aggaac 33054757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 51 - 287
Target Start/End: Original strand, 11199164 - 11199405
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||| | |||||||||||||| | ||||| ||||||| ||| ||||||| |||||||||| |||||||||| |||||       | || ||| |    
T  11199164 catgatcttgaattatcaaattcaattctacaatcctttcaatcaatacaagaaaattgacattactatattgatatgatttatttttttgaaatctttg 11199263  T
Q  151 aaagacacgattaagattaatttc----ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||| ||| ||||||||||||||||     || ||  |||||||||||| | | ||||||||||| | ||||||| |||  ||||||||| ||||||||||    
T  11199264 aaaaacaagattaagattaatttctctagtatgcccattttcaactaaaatagaatttgttttgctttgaaaatcatctcaatttcttgcataataaata 11199363  T
Q  247 tcaccaatatttttaattttggtgagg-acattattaggaac 287  Q
    ||| | ||||||||||| ||  ||||| ||||||||||||||    
T  11199364 tcatcgatatttttaatattaatgaggcacattattaggaac 11199405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 41422822 - 41422921
Alignment:
Q  141 ggaaccttagaaagacacgattaagattaatttcataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataa 240  Q
    ||||||||||||| ||| ||||| ||||||||||||||||| |||||||||||| | ||||||| |||||||||||||||||| | ||||||||||||||    
T  41422822 ggaaccttagaaatacaagattatgattaatttcataggctcattttcaactaaaatataatttattttgttatgaaaattattccaatttcttggataa 41422921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 65 - 272
Target Start/End: Complemental strand, 6883210 - 6882998
Alignment:
Q  65 atcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacacgattaa 164  Q
    ||||||||||||| |  |||| ||||||| ||||||||||| |||||||||| |||| ||| |||||||       ||||||||  ||| ||| ||||||    
T  6883210 atcaaattcaattctagaatcctttcaatcaattcaagaaagttgacattactatatcgatgtaatttatttttt-ggaacctttaaaaaacaagattaa 6883112  T
Q  165 gattaatttca----taggctaattttcaactaagaaataatttgtttt--gttatgaaaattatccaaatttcttggataataaatatcaccaatattt 258  Q
    ||||||||||     |||||   ||||||||||| | ||||||| ||||  |||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  6883111 gattaatttctcaagtaggcatgttttcaactaaaatataattttttttttgttatgaaaattatctcaatttcttggataataagtatcaccaatattt 6883012  T
Q  259 ttaattttggtgag 272  Q
    ||||| || |||||    
T  6883011 ttaatatttgtgag 6882998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 51 - 263
Target Start/End: Complemental strand, 25621663 - 25621448
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| |||||||||||| | ||||||  ||||||| ||||||||||| |||||||||| || || ||||||||||       | ||||||      
T  25621663 catgatcttgcattatcaaattcaactatgcaattctttcaatcaattcaagaaagttgacattactatttttatataatttatttttttgaaaccttta 25621564  T
Q  151 aaagacacgattaagattaatt----tcataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||||| ||||||||||||||    |  ||||   |||||||||||| | ||||||||||||| |||||||| | ||  ||||| ||||||||||| ||    
T  25621563 aaagacaagattaagattaatttatcttgtaggtccattttcaactaaaatataatttgttttgctatgaaaa-tgtctcaatttattggataataagta 25621465  T
Q  247 tcaccaatatttttaat 263  Q
    |||| |||||| |||||    
T  25621464 tcactaatattgttaat 25621448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 51 - 287
Target Start/End: Original strand, 38422817 - 38423056
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| |||||||||||||| | | ||| ||||||| ||| ||||||| |||||| ||| ||||||||||||||||       ||| |||       
T  38422817 catgatcttgcattatcaaattcaattctacgatcctttcaatcaatccaagaaaattgacactactatattgatataatttatttttt-ggatcctct- 38422914  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||| | |||| ||||| |||||     || ||| |||||||||||| | || ||||||||||||||||| ||| ||  ||||||||||||||||||||    
T  38422915 aaagaaaagattgagatttatttctcaagtatgctcattttcaactaaaatatcatttgttttgttatgaagattctctcaatttcttggataataaata 38423014  T
Q  247 tcaccaatatttttaattttggtgagg-acattattaggaac 287  Q
    ||| |||||||||||   || |||||| ||||||||||||||    
T  38423015 tcatcaatatttttataattagtgaggcacattattaggaac 38423056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 13597890 - 13597969
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | ||||||||||||||||| |||||||||| | ||||||||||||||||||| |||||||||||||||    
T  13597890 attttcaactaaaatataatttgttttgttat-aaaattatcccattttcttggataataaatatgaccaatatttttaat 13597969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 7880374 - 7880479
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||||||||| | |||||||||||||||||||||||| ||| |||||  |||||||||||||||||  ||||||||||| || || ||  ||||||||    
T  7880374 attttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 7880473  T
Q  282 aggaac 287  Q
    ||||||    
T  7880474 aggaac 7880479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 22575999 - 22576104
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg-acattatt 281  Q
    |||||||||||| | | |||||| ||||||||||||||||||| ||||| ||||||||||||||||  | ||||||||||| || |||||| | ||||||    
T  22575999 attttcaactaaaatagaatttgctttgttatgaaaattatcccaattttttggataataaatatcgtcgatatttttaatattagtgaggcaaattatt 22576098  T
Q  282 aggaac 287  Q
    ||||||    
T  22576099 aggaac 22576104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 45277506 - 45277611
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||||||||| | |||||||||||||||||||||||| ||| |||||  |||||||||||||||||  ||||||||||| || || ||  ||||||||    
T  45277506 attttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 45277605  T
Q  282 aggaac 287  Q
    ||||||    
T  45277606 aggaac 45277611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 31549050 - 31549162
Alignment:
Q  59 tgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacac 158  Q
    |||| |||||||||||||||||||||||||| ||| ||||||| ||| |||||||||| ||| ||||||||||||       |||||||| |||| |||     
T  31549050 tgcattatcaaattcaattttgcaatctttttaatcaattcaaaaaagttgacattactataatgatataatttaattttttggaacctttgaaaaacaa 31549149  T
Q  159 gattaagattaat 171  Q
    |||||| ||||||    
T  31549150 gattaaaattaat 31549162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 27861836 - 27861941
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||||||||||||| | |||||||||||||||||||||   | ||||||||||| || ||| || ||||||||    
T  27861836 attttcaactaaaatagaatttgctttgttatgaaaattattccaatttcttggataataaatattgtcgatatttttaatattagtgaagtacattatt 27861935  T
Q  282 aggaac 287  Q
    ||||||    
T  27861936 aggaac 27861941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 41422922 - 41422995
Alignment:
Q  215 gaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattattaggaac 287  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||| || ||| || ||||||||||||||    
T  41422922 gaaaattatcccagtttcttggataataaatatcaccaatatttttaatattagtgaagcacattattaggaac 41422995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 19678108 - 19678028
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | ||||||||||||||||||| |||| ||| |||||  |||||||||||||||||  |||||||||||    
T  19678108 attttcaactaaaatataatttgttttgttatgagaattctcccaattttctggataataaatatcacatatatttttaat 19678028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 44314058 - 44314138
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | | |||||| ||||||||||||||||||  ||||||||||||||||||||||  | |||||||||||    
T  44314058 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaat 44314138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 44322237 - 44322317
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | | |||||| ||||||||||||||||||  ||||||||||||||||||||||  | |||||||||||    
T  44322237 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaat 44322317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 183 - 364
Target Start/End: Original strand, 41825979 - 41826166
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||| ||| | | |||||||||||| ||||||||||||  ||||||||||||||||||||||  | ||||||||||| || ||| || ||||||||    
T  41825979 attttcaaataaaatagaatttgttttgtaatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattatt 41826078  T
Q  282 aggaac-----cccnnnnnnnntatcgctaagttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
    | ||||      ||        |||| |||| |||||||||||||||||||   ||| ||||||||||| ||||||||| ||||||||    
T  41826079 aagaacaaagggcccaaaaaaatatcactaatttcttcgataataaattttcaagcatattattaagaacaaccaattttttttatag 41826166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 283
Target Start/End: Complemental strand, 9057472 - 9057388
Alignment:
Q  198 ataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg-acattattag 283  Q
    |||||||||||||| || |||||||||  ||||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||    
T  9057472 ataatttgttttgt-at-aaaattatctcaatttcttggataataaatatgaccaatatatttaattttagtgaggcacattattag 9057388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 33015208 - 33015288
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | | |||||| |||||||||||||||||||  |||| ||||||||||||||||  | |||||||||||    
T  33015208 attttcaactaaaatagaatttgctttgttatgaaaattatccccatttattggataataaatatcgtcgatatttttaat 33015288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 2554145 - 2554040
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||| ||| | | |||||| ||||| ||||||||||||  ||||||||||||||||||||||  | ||||||||||| || ||| || ||||||||    
T  2554145 attttcaaataaaatagaatttgctttgtaatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattatt 2554046  T
Q  282 aggaac 287  Q
    | ||||    
T  2554045 aagaac 2554040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 2565701 - 2565596
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||| ||||| | || ||||||||||||||||| ||| ||| |||||  |||||||||||||||||  ||||||||||| || || ||  ||||||||    
T  2565701 attttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaatatcacatatatttttaatattagtaagatacattatt 2565602  T
Q  282 aggaac 287  Q
    ||||||    
T  2565601 aggaac 2565596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 434
Target Start/End: Complemental strand, 21573931 - 21573817
Alignment:
Q  324 ttttttggcacattattaagaaaaaccaatttattttatagagtggg----tataaaaatctttgtgttatacgagagtatatataacaaatctcgctaa 419  Q
    |||||||||||||||||||||| |||||| || ||||| || | |||    |||| ||||||||||| |||||| | ||| |||||||||||||| | ||    
T  21573931 ttttttggcacattattaagaacaaccaaatttttttacagggagggtgtatatagaaatctttgtgctatacgggggtacatataacaaatctccccaa 21573832  T
Q  420 aagggcttaaaacat 434  Q
    ||||||  |||||||    
T  21573831 aagggcaaaaaacat 21573817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 41422436 - 41422513
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatata 128  Q
    |||||||||||||||  ||||| ||||  |||||  |||  || ||||||||||||||||||||||||||||||||||    
T  41422436 catgatcttgcaataataaatttaattacgcaattattttgatcaattcaagaaatttgacattacaatattgatata 41422513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 261
Target Start/End: Original strand, 43673290 - 43673367
Alignment:
Q  184 ttttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatattttta 261  Q
    ||||||||| | | |||||||||||||||| ||| ||| || | |||||| ||||||||||||||| |||||||||||    
T  43673290 ttttcaactcaaatataatttgttttgttaggaagattctctatatttctcggataataaatatcatcaatattttta 43673367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 18781197 - 18781277
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||| ||||| | || ||||||||||||||||| ||| ||| |||||  |||||||||||||||||  |||||||||||    
T  18781197 attttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaatatcacatatatttttaat 18781277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 24484431 - 24484379
Alignment:
Q  312 ttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
    ||||||||||| |||||| || |||||||||||||||||||||| ||||||||    
T  24484431 ttcgataataatttttttagcccattattaagaaaaaccaattttttttatag 24484379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 29303256 - 29303176
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | ||||||||||||||| | | |||| ||| |||||  |||||||||||||||||  |||||||||||    
T  29303256 attttcaactaaaatataatttgttttgttcttagaattctcccaattttctggataataaatatcacatatatttttaat 29303176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 6221451 - 6221410
Alignment:
Q  207 tttgttatgaaaattatccaaatttcttggataataaatatc 248  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  6221451 tttgttatgaaaattatcctcatttcttggataataaatatc 6221410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 9425217 - 9425278
Alignment:
Q  184 ttttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaat 245  Q
    ||||||||||| | || ||||||||||||||||| ||| ||  |||||||||||||||||||    
T  9425217 ttttcaactaaaatatcatttgttttgttatgaagattctctcaatttcttggataataaat 9425278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 19685856 - 19685779
Alignment:
Q  209 tgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattattagga 285  Q
    ||||| ||||||||||| ||||||||||||||||||||||  | |||| |||||| || ||| || ||||||||||||    
T  19685856 tgttacgaaaattatcccaatttcttggataataaatatcgtcgatatgtttaatattagtgaagcacattattagga 19685779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 43673157 - 43673218
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgaca 112  Q
    |||||||||||| ||||||||||||||||| |||||||||| | ||  ||||||| ||||||    
T  43673157 catgatcttgcattatcaaattcaattttgtaatcttttcagtcaacccaagaaagttgaca 43673218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 352
Target Start/End: Original strand, 19091333 - 19091373
Alignment:
Q  312 ttcgataataaattttttggcacattattaagaaaaaccaa 352  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  19091333 ttcgataataaattttttgacacattattaagaacaaccaa 19091373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 351
Target Start/End: Original strand, 13598023 - 13598062
Alignment:
Q  312 ttcgataataaattttttggcacattattaagaaaaacca 351  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  13598023 ttcgataataaattttttggcacattattaaaaacaacca 13598062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 11199422 - 11199468
Alignment:
Q  299 tatcgctaagttcttcgataataaattttttggcacattattaagaa 345  Q
    |||| |||| ||||||||||||||||||||| ||| |||||||||||    
T  11199422 tatcactaatttcttcgataataaattttttagcatattattaagaa 11199468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 24484751 - 24484717
Alignment:
Q  19 gaaatgatcatgaatgtgtctcacatcggtttcat 53  Q
    ||||||||||||| |||||||||||||||||||||    
T  24484751 gaaatgatcatgagtgtgtctcacatcggtttcat 24484717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 364
Target Start/End: Complemental strand, 2554023 - 2553958
Alignment:
Q  299 tatcgctaagttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
    |||| |||| |||||||||||||||||||   | | ||||||||||| ||||||||| ||||||||    
T  2554023 tatcactaatttcttcgataataaattttcaagtatattattaagaacaaccaattttttttatag 2553958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 31549160 - 31549205
Alignment:
Q  243 aatatcaccaatatttttaattttggtgagg-acattattaggaac 287  Q
    ||||||||||||||||||||| || |||||| ||||||||||||||    
T  31549160 aatatcaccaatatttttaatattagtgaggcacattattaggaac 31549205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 38566053 - 38566090
Alignment:
Q  19 gaaatgatcatgaatgtgtctcacatcggtttcatgat 56  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  38566053 gaaatgatcatgtatgcgtctcacatcggtttcatgat 38566090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 435
Target Start/End: Original strand, 41423072 - 41423136
Alignment:
Q  371 tataaaaatctttgtgttatacgagagtatatataacaaatctcgctaaaagggcttaaaacatt 435  Q
    |||| |||||||||||||||| ||  |||||| || |||||||||| ||||||||  ||||||||    
T  41423072 tatagaaatctttgtgttatatgaaggtatatctagcaaatctcgcaaaaagggccaaaaacatt 41423136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 8e-65; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 51 - 287
Target Start/End: Complemental strand, 9137755 - 9137518
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||| |||||||||| |||||||||| ||||||||||||||| |        |||||||||    
T  9137755 catgatcttacaatattaaattcaattttgaaatcctttcaatcaattcaagaattttgacattataatattgatataattaattttttttgaaccttag 9137656  T
Q  151 aaagacacgattaagattaatttcataggctaattttcaactaagaaataatttgttttgttatgaaaattatcca-aatttcttggataataaatatca 249  Q
    ||||||| |||||||||||||  |||||||| |||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9137655 aaagacaagattaagattaata-cataggctcattttcaactaaaatataatttgttttgttatgaaaattatccacaatttcttggataataaatatca 9137557  T
Q  250 ccaatatttttaattttggtgag-gacattattaggaac 287  Q
    |||||||||||||| || |||||  ||||||||||||||    
T  9137556 ccaatatttttaatattagtgagacacattattaggaac 9137518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 52 - 263
Target Start/End: Original strand, 24190229 - 24190440
Alignment:
Q  52 atgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttaga 151  Q
    ||||||||||||||||| |||||||||||||||| |||||||  |||||| ||| |||||||||||||||||||||||||||       | |||| ||||    
T  24190229 atgatcttgcaatatcatattcaattttgcaatcctttcaatccattcaaaaaagttgacattacaatattgatataatttatttttttgaaaccataga 24190328  T
Q  152 aagacacgattaagattaatttcataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcacc 251  Q
    ||||||  ||||||||||| ||| ||| || |||||||||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||||| |    
T  24190329 aagacaaaattaagattaacttcgtagactcattttcaactaaaatataatttgttttgttataaaaattatcccaatttcttggataataaatatcatc 24190428  T
Q  252 aatatttttaat 263  Q
    ||||||||||||    
T  24190429 aatatttttaat 24190440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 51 - 287
Target Start/End: Original strand, 11648633 - 11648873
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||| ||||| |||||||||||||||||||||| ||| ||| ||||||||||| || || |||  ||| ||||||||||||       |||||||| |    
T  11648633 catgattttgcattatcaaattcaattttgcaatcattttaatcaattcaagaaagttaaccttagtataatgatataatttaattatttggaacctttg 11648732  T
Q  151 aaagacacgattaagattaatttc----ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||||| |||| |||||||||||    ||  |   |||||||||||| | ||||||||||||||||| |||||||||  |||||||| |||||||||||    
T  11648733 aaagacaagattgagattaatttctctaatgagtccattttcaactaaaatataatttgttttgttat-aaaattatctcaatttctttgataataaata 11648831  T
Q  247 tcaccaatatttttaattttggtgagg-acattattaggaac 287  Q
    ||||||||||||||||| || |||||| ||||||||||||||    
T  11648832 tcaccaatatttttaatattagtgaggcacattattaggaac 11648873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 97 - 286
Target Start/End: Original strand, 9382150 - 9382344
Alignment:
Q  97 ttcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacacgattaagattaatttc----ataggctaattttcaact 192  Q
    ||||||||| |||||||||| |||||||| |||||||       |||||||| |||||| | |||||| ||||||||     |||||   ||||||||||    
T  9382150 ttcaagaaagttgacattactatattgatgtaatttaattttttggaacctttgaaagaaaagattaaaattaatttttctaataggtccattttcaact 9382249  T
Q  193 aagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattattaggaa 286  Q
    || | |||||||||||||||||||||||||||| ||||  || |||| ||||||||||||||||||||||| || ||| || |||||||||||||    
T  9382250 aaaatataatttgttttgttatgaaaattatcccaattcattagatagtaaatatcaccaatatttttaatattagtgaagcacattattaggaa 9382344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 1981685 - 1981580
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||| ||  || || ||||||||    
T  1981685 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcaatatttttaatattaatgaagcacattatt 1981586  T
Q  282 aggaac 287  Q
    ||||||    
T  1981585 aggaac 1981580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 4432087 - 4432192
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||||||||||||||| |||||||||||||||||||||   ||||||||||||| || ||| || ||||||||    
T  4432087 attttcaactaaaataaaatttgctttgttatgaaaattatcccaatttcttggataataaatattgtcaatatttttaatattagtgaagtacattatt 4432186  T
Q  282 aggaac 287  Q
    ||||||    
T  4432187 aggaac 4432192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 45117555 - 45117450
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | |||||||| ||||||||||||||||||| ||||||||||||||||||||||  | ||||||||||| || | | || ||||||||    
T  45117555 attttcaactaaaatataatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagcgaagcacattatt 45117456  T
Q  282 aggaac 287  Q
    ||||||    
T  45117455 aggaac 45117450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 81 - 263
Target Start/End: Original strand, 28374474 - 28374658
Alignment:
Q  81 caatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacacgattaagattaatttca----t 176  Q
    ||||||||||||| ||||||||||| |||| ||||| ||||||||||||||||        |||| ||  ||| ||| ||||||||||||||||     |    
T  28374474 caatcttttcaatcaattcaagaaagttgaaattactatattgatataatttaatttttttgaacatttaaaaaacaagattaagattaatttctctagt 28374573  T
Q  177 aggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |  || |||||||||||| | ||||||| ||| ||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||    
T  28374574 aaactcattttcaactaaaatataatttatttggttat-aaaattattcaaatttcttgaataataaatatca-caatatttttaat 28374658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 285
Target Start/End: Complemental strand, 31597611 - 31597508
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||||||||||||||| ||||||||||||||||||||||  | ||||||||||| || ||| || ||||||||    
T  31597611 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattatt 31597512  T
Q  282 agga 285  Q
    ||||    
T  31597511 agga 31597508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 6927561 - 6927666
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||||||||| | |||||||||||||||||||||||| ||| |||||  |||||||||||||||||  ||||||||||| || || ||  ||||||||    
T  6927561 attttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 6927660  T
Q  282 aggaac 287  Q
    ||||||    
T  6927661 aggaac 6927666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 28509340 - 28509235
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||||||||| | |||||||||||||||||||||||| ||| |||||  |||||||||||||||||  ||||||||||| || || ||  ||||||||    
T  28509340 attttcaactaaaatataatttgttttgttatgaaaattctcctaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 28509241  T
Q  282 aggaac 287  Q
    ||||||    
T  28509240 aggaac 28509235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 3762786 - 3762721
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatc 248  Q
    |||||||||||| | | |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  3762786 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatc 3762721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 7972996 - 7973097
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||||||||||||||| |||||||||||||| |||||||  | ||||||||||| || ||| || ||||||||    
T  7972996 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataaaaaatatcgtcgatatttttaatattagtgaagcacattatt 7973095  T
Q  282 ag 283  Q
    ||    
T  7973096 ag 7973097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 32073347 - 32073258
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag 272  Q
    |||||||||||| | |||||| ||||||||   || ||||||  ||||||||||||||||||||||||||||||||||||| || |||||    
T  32073347 attttcaactaaaatataattcgttttgttgcaaagattatcacaatttcttggataataaatatcaccaatatttttaatattagtgag 32073258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 16729819 - 16729739
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | | |||||| ||||||| ||||||||||| ||||||||||||||||||||||  | |||||||||||    
T  16729819 attttcaactaaaatagaatttgctttgttaagaaaattatcccaatttcttggataataaatatcgtcgatatttttaat 16729739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 273
Target Start/End: Original strand, 23232232 - 23232329
Alignment:
Q  176 taggctaattttcaactaagaaataatttgttttg-ttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg 273  Q
    |||||| |||||||| ||| | ||||||| ||||| |||| ||| |||||| ||||||||  ||||||||||||||||||||||||||| |||| ||||    
T  23232232 taggctcattttcaattaaaatataatttattttggttat-aaagttatcctaatttcttcaataataaatatcaccaatatttttaatattggcgagg 23232329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 39906336 - 39906231
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| |||||||| |||||||| | ||||| |||||||||||||| |  | ||||||||||| || ||| || ||||||||    
T  39906336 attttcaactaaaatagaatttgctttgttataaaaattattccaatttattggataataaataacgtcgatatttttaatattagtgaagcacattatt 39906237  T
Q  282 aggaac 287  Q
    ||||||    
T  39906236 aggaac 39906231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 2879232 - 2879312
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||| ||||| | || ||||||||||||||||| ||| ||| |||||  |||||||||||||||||  |||||||||||    
T  2879232 attttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaatatcacatatatttttaat 2879312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 40971531 - 40971451
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||| ||| | | |||||| ||||| ||||||||||||  ||||||||||||||||||||||  | |||||||||||    
T  40971531 attttcaaataaaatagaatttgctttgtaatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaat 40971451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 11648903 - 11648954
Alignment:
Q  313 tcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||| ||||||||    
T  11648903 tcgataataaaatttttagcacattattaagaacaaccaattttttttatag 11648954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 287
Target Start/End: Complemental strand, 24682705 - 24682599
Alignment:
Q  182 aattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattat 280  Q
    ||||||| ||||| | ||||||||||| |||||||| ||| ||| |||||  | ||||||||||||||| |||||| ||||| || || ||  |||||||    
T  24682705 aattttcgactaaaatataatttgtttcgttatgaatattttcccaattttctagataataaatatcacaaatattcttaatattagtaagacacattat 24682606  T
Q  281 taggaac 287  Q
    |||||||    
T  24682605 taggaac 24682599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 421
Target Start/End: Original strand, 24190502 - 24190608
Alignment:
Q  319 ataaattttttggcacattattaagaaaaaccaa--tttattttatag----agtgggtataaaaatctttgtgttatacgagagtatatataacaaatc 412  Q
    |||||||||||||||||||||||||||||| |||  ||| ||||||||     |||  |||| |||||  ||||| ||||||| ||||||||| ||||||    
T  24190502 ataaattttttggcacattattaagaaaaatcaaacttttttttatagggaaggtgtatatagaaatc--tgtgtaatacgagggtatatatagcaaatc 24190599  T
Q  413 tcgctaaaa 421  Q
    |||||||||    
T  24190600 tcgctaaaa 24190608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 2807704 - 2807784
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | ||||||||||| ||| |||| ||| ||  |||||  |||||||||| |||||| ||||||||||||    
T  2807704 attttcaactaaaatataatttgtttcgttgtgaagattctcacaattttctggataataattatcacaaatatttttaat 2807784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 7263671 - 7263727
Alignment:
Q  207 tttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    ||||| ||||||||||||  ||||||||||||||||||||||  | |||||||||||    
T  7263671 tttgtaatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaat 7263727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 18327310 - 18327255
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
    ||||||||||||||||||||  ||| ||||||||||| ||| ||||| ||||||||    
T  18327310 ttcttcgataataaatttttgagcatattattaagaacaactaattttttttatag 18327255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 263
Target Start/End: Complemental strand, 10697426 - 10697348
Alignment:
Q  185 tttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||| | |||||||| ||||||| ||| ||| | | |||||||||||||| || |||||| || |||||||||    
T  10697426 tttcaactaaaatataatttgatttgttaggaagattctactaatttcttggataaaaagtatcacaaagatttttaat 10697348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 364
Target Start/End: Original strand, 7263769 - 7263834
Alignment:
Q  299 tatcgctaagttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
    |||| |||| |||||||||||||||||||    || ||||||||||| ||||||||| ||||||||    
T  7263769 tatcactaatttcttcgataataaattttcaaacatattattaagaacaaccaattttttttatag 7263834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 12700300 - 12700243
Alignment:
Q  202 tttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttt 259  Q
    |||||||||||| ||| ||| ||  |||||||| |||||||||||| |||||||||||    
T  12700300 tttgttttgttacgaagattctcacaatttcttagataataaatattaccaatatttt 12700243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 352
Target Start/End: Original strand, 23232373 - 23232413
Alignment:
Q  312 ttcgataataaattttttggcacattattaagaaaaaccaa 352  Q
    |||||| |||||||||||| |||||||||||||| ||||||    
T  23232373 ttcgatgataaattttttgacacattattaagaacaaccaa 23232413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 119; Significance: 1e-60; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 53 - 287
Target Start/End: Complemental strand, 41035 - 40800
Alignment:
Q  53 tgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaa 152  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||||         |||| |||||    
T  41035 tgatcttgcaatatcaaattcaattttgcaatgctttcaaccaattcaagaaatttgacattacaatattgatataatttagtattttttaaccatagaa 40936  T
Q  153 agacacgattaagattaatttcataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcacca 252  Q
    ||||| |||||||||||||||  ||| || |||||||||||| | |||||||||||||||||| |||||||   |||||||||||||||||||||||| |    
T  40935 agacaagattaagattaattttgtagcctcattttcaactaaaatataatttgttttgttatgtaaattatttcaatttcttggataataaatatcacaa 40836  T
Q  253 atatttttaattttggtgagg-acattattaggaac 287  Q
    ||||||||||| || || ||| ||||||||||||||    
T  40835 atatttttaatattagttaggcacattattaggaac 40800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 435
Target Start/End: Complemental strand, 40768 - 40644
Alignment:
Q  315 gataataaattttttggcacattattaagaaaaaccaatttattttatagagtggg----tataaaaatctttgtgttatacgagagtatatataacaaa 410  Q
    |||||||| ||||||||||||||||||||||||||||| || ||||| || | |||    |||| |||| |||||||||||  |  ||||||||| ||||    
T  40768 gataataatttttttggcacattattaagaaaaaccaaatttttttaaagggagggtgcatatataaatttttgtgttatagaacggtatatatagcaaa 40669  T
Q  411 tctcgctaaaagggcttaaaacatt 435  Q
    |||  | |||||||| |||| ||||    
T  40668 tctgaccaaaagggcctaaatcatt 40644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 51 - 287
Target Start/End: Original strand, 18478 - 18719
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    ||||||||| || |||||||||||| | |||||||  || ||| |||||||||||||||||||||||||||||||||||||||       |||| ||| |    
T  18478 catgatctttcattatcaaattcaaatatgcaatccattgaatcaattcaagaaatttgacattacaatattgatataatttatttttttggaatctttg 18577  T
Q  151 aaagacacgattaagattaa--tttca--taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||||  ||||||||||||  ||||   |||||| |||||||||||| | | ||||||||||||||| ||||| |||  ||||| ||||||||||||||    
T  18578 aaagactagattaagattaagttttctagtaggctcattttcaactaaaataaaatttgttttgttataaaaataatctcaatttattggataataaata 18677  T
Q  247 tcaccaatatttttaattttggtgagg-acattattaggaac 287  Q
    ||||||||||||||||| || |||||| ||||||||||||||    
T  18678 tcaccaatatttttaatattagtgaggcacattattaggaac 18719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 51 - 263
Target Start/End: Original strand, 5509734 - 5509950
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||| |||||||||| ||||||||||||||||       |||| ||| |    
T  5509734 catgatcttgcattatcaaattcaattctgcaatctttttaatcaattcaagaaagttgacattactatattgatataatttaaatttttggaatctttg 5509833  T
Q  151 aaagacacgattaagattaatt----tcataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||||| ||||||||||||||    |  |||||  ||||||| |||| | | ||||| |||||||||||||||||||| ||||||||||||||||||||    
T  5509834 aaagacaagattaagattaatttatctagtaggcacattttcatctaaaatagaatttattttgttatgaaaattatcccaatttcttggataataaata 5509933  T
Q  247 tcaccaatatttttaat 263  Q
    |  ||||||||||||||    
T  5509934 tggccaatatttttaat 5509950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 51 - 263
Target Start/End: Original strand, 5209559 - 5209775
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| |||||||||| |   ||||||| ||||||| ||||||||||| |||||||||| |||||||| |||| ||       | |||||| |    
T  5209559 catgatcttgcattatcaaattcgaccatgcaatcctttcaatcaattcaagaaagttgacattactatattgatgtaatatatttttttgaaacctttg 5209658  T
Q  151 aaagacacgattaagattaatttcat----aggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||| ||| |||||||||||||||| |    |||   |||||||||||| | |||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  5209659 aaaaacaagattaagattaatttctttagtaggtatattttcaactaaaatataatttgttttgttatgaaaattatcccaatttattggataataaata 5209758  T
Q  247 tcaccaatatttttaat 263  Q
    |||||||||| ||||||    
T  5209759 tcaccaatatgtttaat 5209775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 51 - 263
Target Start/End: Original strand, 24185544 - 24185759
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||| ||| | |||||||||||||||| ||||| ||| || ||||||||| || || ||||||| ||||||||||||||||       ||||| |  |    
T  24185544 catgattttgtattatcaaattcaattttacaatccttttaactaattcaagcaagtttacattactatattgatataatttaattttttggaacttctg 24185643  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||||| |||||||||||||||      ||| |  |||||||||||| | ||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  24185644 aaagacaagattaagattaattttgctagtagacccattttcaactaaaatataatttgttttgttat-aaaattatcccaatttcttggacaataaata 24185742  T
Q  247 tcaccaatatttttaat 263  Q
    |||||||||||||||||    
T  24185743 tcaccaatatttttaat 24185759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 47397437 - 47397647
Alignment:
Q  83 atcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnn-ggaaccttagaaagacacgattaagattaattt-----cat 176  Q
    ||||| ||||| ||||||||||| |||||||||| ||||||||||||||||        |||||||| |||||||| |||||||||||||||     |||    
T  47397437 atcttgtcaatcaattcaagaaagttgacattactatattgatataatttattttttttggaacctttgaaagacaagattaagattaattttatctcat 47397536  T
Q  177 aggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtga-ggac 275  Q
    |||   |||||||||||||| |||||| |||   ||||||||||||||| ||||||||||||||||||||||| | ||||||||||| || |||| | ||    
T  47397537 aggtccattttcaactaagatataatt-gttccattatgaaaattatccgaatttcttggataataaatatcatcgatatttttaatattagtgatgcac 47397635  T
Q  276 attattaggaac 287  Q
    ||||||||||||    
T  47397636 attattaggaac 47397647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 55 - 287
Target Start/End: Complemental strand, 12028008 - 12027771
Alignment:
Q  55 atcttgcaatatcaaattcaattttgcaat-cttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaa 153  Q
    |||||||| ||||||||| || | |||||| ||||||||| |||| ||||||  || ||||||||||| |||  ||||||       | |||||| ||||    
T  12028008 atcttgcattatcaaatttaactatgcaattcttttcaatcaattgaagaaagctggcattacaatatcgatgcaatttatttttttg-aacctttgaaa 12027910  T
Q  154 gacacgattaagattaatttc----ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatca 249  Q
    ||||  |||||||||||||||    |||||   |||||||||||| |  |||||||||||||||||||||| ||| |||||| || || |||||||||||    
T  12027909 gacaatattaagattaatttctctaataggtccattttcaactaaaatctaatttgttttgttatgaaaatcatcaaaatttattcgaaaataaatatca 12027810  T
Q  250 ccaatatttttaattttggtg-aggacattattaggaac 287  Q
    |||||||||||||| || ||| || ||||||||||||||    
T  12027809 ccaatatttttaatattagtgaagcacattattaggaac 12027771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 49229352 - 49229432
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  49229352 attttcaactaaaatataatttattttgttatgaaaattatcccaatttcttggataataaatatcatcaatatttttaat 49229432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 183 - 425
Target Start/End: Original strand, 17967339 - 17967589
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||| ||||||||||| ||||||||||||||||||||||  | ||||||||||| || ||| || ||||||||    
T  17967339 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattatt 17967438  T
Q  282 aggaac-----cccnnnnnnnntatcgctaagttcttcgataataaattttttggcacattattaagaaaaaccaatttattttat---agagtgggtat 373  Q
    ||||||      ||        || | | || ||||||||||||||||||||| ||| ||||| ||||| ||||||||| ||||||   || |||  |||    
T  17967439 aggaacaaagggcccaaaaaaatagcaccaatttcttcgataataaattttttagcatattatcaagaacaaccaattttttttataggagggtgtatat 17967538  T
Q  374 aaaaatctttgtgttatacgagagtatatataacaaatctcgctaaaagggc 425  Q
    | |||| ||||||||||| |||| |||||||| |||||||| ||||||||||    
T  17967539 agaaatttttgtgttatatgaga-tatatatagcaaatctcactaaaagggc 17967589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 76 - 260
Target Start/End: Original strand, 47559456 - 47559642
Alignment:
Q  76 ttttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacacgattaagattaatttca 175  Q
    |||||||||| |||| || ||||||||||| |||||||||| ||||||||||||||||       | ||| || ||||||||  |||||||||||||||     
T  47559456 ttttgcaatcatttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaacttt-gaaagacaatattaagattaatttct 47559554  T
Q  176 ----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatattttt 260  Q
        || ||  ||||| |||||| | ||||||||||||||||| |||||||||| ||||| || |||||||||||||||||||| ||||    
T  47559555 ctagtaagcacatttttaactaaaatataatttgttttgttat-aaaattatcccaatttttttgataataaatatcaccaatactttt 47559642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 25095254 - 25095149
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||||||||||||||| |||||||||||||||||||| |  ||||||||||||| || ||| || ||||||||    
T  25095254 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaataccgtcaatatttttaatattagtgaagcacattatt 25095155  T
Q  282 aggaac 287  Q
    ||||||    
T  25095154 aggaac 25095149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 48646228 - 48646163
Alignment:
Q  198 ataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    ||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  48646228 ataatttgttttgttttgaaaattatcccaatttattggataataaatatcaccaatatttttaat 48646163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 36296782 - 36296677
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||||||||| | ||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||  ||||||||||| || || ||  ||||||||    
T  36296782 attttcaactaaaatataatttgtttggttatgaaaattctcccaattttttggataataaatatcacatatatttttaatattagtaagacacattatt 36296683  T
Q  282 aggaac 287  Q
    ||||||    
T  36296682 aggaac 36296677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 48596367 - 48596472
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||||||||||||||| ||||||||||||||||||||||  | ||||||||||| ||  || || ||||||||    
T  48596367 attttcaactaaaatagaatttgctttgttatgaaaattatcctaatttcttggataataaatatcgtcgatatttttaatattaatgaagcacattatt 48596466  T
Q  282 aggaac 287  Q
    ||||||    
T  48596467 aggaac 48596472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 285
Target Start/End: Complemental strand, 5049544 - 5049441
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||| ||||||||||| ||||||||||||||||||||||  | ||||||||||| || ||| || ||||||||    
T  5049544 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 5049445  T
Q  282 agga 285  Q
    ||||    
T  5049444 agga 5049441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 23664123 - 23664228
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||||||||||||||| |||||||||||||||||||||   ||| ||||||||| || ||| |  ||||||||    
T  23664123 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatggtcaacatttttaatattagtgaaacacattatt 23664222  T
Q  282 aggaac 287  Q
    ||||||    
T  23664223 aggaac 23664228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 28945834 - 28945939
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||||||||| | ||||||||||||||||||| |||| ||| |||||  |||||||||||||||||  ||||||||||| || || ||  ||||||||    
T  28945834 attttcaactaaaatataatttgttttgttatgagaattctcccaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 28945933  T
Q  282 aggaac 287  Q
    ||||||    
T  28945934 aggaac 28945939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 42722317 - 42722212
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||||||||| | ||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||   |||||||||| || || ||  ||||||||    
T  42722317 attttcaactaaaatataatttgtttggttatgaaaattctcccaattttttggataataaatatcacatgtatttttaatattagtaagacacattatt 42722218  T
Q  282 aggaac 287  Q
    ||||||    
T  42722217 aggaac 42722212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 9023302 - 9023202
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg-acattatt 281  Q
    |||||||||||| | | ||||||||||||||| |||| ||||| ||||  ||||||||||||||||| | ||||||||||| || |||||| ||||||||    
T  9023302 attttcaactaaaatagaatttgttttgttattaaaactatcccaattatttggataataaatatcatcgatatttttaatattagtgaggcacattatt 9023203  T
Q  282 a 282  Q
    |    
T  9023202 a 9023202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 183 - 285
Target Start/End: Complemental strand, 21906468 - 21906365
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||| ||||||||||| |||||||||||||||||||||   | ||||||||||| || ||| || ||||||||    
T  21906468 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatattgtcgatatttttaatattagtgaagcacattatt 21906369  T
Q  282 agga 285  Q
    ||||    
T  21906368 agga 21906365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 183 - 285
Target Start/End: Original strand, 27430805 - 27430908
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||| ||||||||||| ||||||||||||||||||||||  | ||||||||| | || ||| || ||||||||    
T  27430805 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttagtattagtgaagtacattatt 27430904  T
Q  282 agga 285  Q
    ||||    
T  27430905 agga 27430908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 183 - 285
Target Start/End: Original strand, 34307461 - 34307564
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||| ||||||||||| ||||||||| ||||||||||||  | ||||||||||| || ||| || ||||||||    
T  34307461 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttgaataataaatatcgtcgatatttttaatattagtgaagcacattatt 34307560  T
Q  282 agga 285  Q
    ||||    
T  34307561 agga 34307564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 44310518 - 44310439
Alignment:
Q  209 tgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg-acattattaggaac 287  Q
    ||||||||||||||||  |||||| |||||||| ||||||||||||||||| ||| || |||||| ||||||||||||||    
T  44310518 tgttatgaaaattatctcaatttcatggataattaatatcaccaatattttcaatattagtgaggcacattattaggaac 44310439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 22070592 - 22070487
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| | ||||||||||||||||  ||||| ||||||||||||||||  | ||||||||||| || ||| || ||||||||    
T  22070592 attttcaactaaaatagaatttgctctgttatgaaaattatctcaattttttggataataaatatcgtcgatatttttaatattagtgaagcacattatt 22070493  T
Q  282 aggaac 287  Q
    ||||||    
T  22070492 aggaac 22070487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 26221764 - 26221659
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||| ||||| | || ||||||||||||||||| ||| ||| ||||| ||||||||||||||||||  ||||||||||| || || ||  ||||||||    
T  26221764 attttctactaaaatattatttgttttgttatgaagattctcccaattttttggataataaatatcacatatatttttaatattagtaagatacattatt 26221665  T
Q  282 aggaac 287  Q
    ||||||    
T  26221664 aggaac 26221659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 44310612 - 44310547
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattac 116  Q
    |||||||||||| |||||||||||||| ||||||  ||||||| ||||||||||| ||||||||||    
T  44310612 catgatcttgcattatcaaattcaattatgcaattctttcaatcaattcaagaaagttgacattac 44310547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 47397674 - 47397732
Alignment:
Q  305 taagttcttcgataataaattttttggcacattattaagaaaaaccaatttattttata 363  Q
    ||| |||||| |||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  47397674 taatttcttcaataataaattttttggcaaattattaagaataaccaattttttttata 47397732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 12784000 - 12784074
Alignment:
Q  198 ataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg 273  Q
    ||||||||||||| ||| |||||||||  ||||| ||||||||||||||  ||||||||||||||| || ||||||    
T  12784000 ataatttgttttgctat-aaaattatcgcaattttttggataataaatactaccaatatttttaatattagtgagg 12784074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 17385407 - 17385495
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag 272  Q
    ||||||||| || | | |||||||||||||||||||||| ||  |||||| | |||||||||||||||  ||||||||||| || |||||    
T  17385407 attttcaacaaaaatagaatttgttttgttatgaaaattgtctcaatttc-tagataataaatatcactgatatttttaatattagtgag 17385495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 48999466 - 48999389
Alignment:
Q  209 tgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattattagga 285  Q
    ||||| ||||||||||| ||||||||||||||||||||||  | |||| |||||| || ||| || ||||||||||||    
T  48999466 tgttacgaaaattatcccaatttcttggataataaatatcgtcgatatgtttaatattagtgaagcacattattagga 48999389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 5049412 - 5049357
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
    ||||||||||||||||||||  ||| ||||| ||||| ||||||||| ||||||||    
T  5049412 ttcttcgataataaatttttgagcatattatcaagaacaaccaattttttttatag 5049357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 352
Target Start/End: Complemental strand, 9023171 - 9023128
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaa 352  Q
    ||||||||||||||||||||  ||||||||||||||| ||||||    
T  9023171 ttcttcgataataaatttttgcgcacattattaagaacaaccaa 9023128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 34307593 - 34307648
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
    ||||||||||||||||||||  ||| ||||| ||||| ||||||||| ||||||||    
T  34307593 ttcttcgataataaatttttgagcatattatcaagaacaaccaattttttttatag 34307648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 352
Target Start/End: Complemental strand, 48646112 - 48646069
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaa 352  Q
    |||||||||||||| |||||||| ||||||||| ||||||||||    
T  48646112 ttcttcgataataatttttttggaacattattaggaaaaaccaa 48646069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 41665691 - 41665615
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttt 259  Q
    |||||||||||| | |||||||  ||||||| |||| || | | |||||||| |||||||||||||| |||| ||||    
T  41665691 attttcaactaaaatataatttactttgttaggaaagtttttccaatttcttagataataaatatcatcaatttttt 41665615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 91; Significance: 6e-44; HSPs: 2)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 51 - 287
Target Start/End: Complemental strand, 1538 - 1297
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| ||| ||| |||| | |||||||  || ||| |||||||||||||||||||||||||||||||||||||||       |||| ||| |    
T  1538 catgatcttgcattattaaagtcaaatatgcaatccattgaatcaattcaagaaatttgacattacaatattgatataatttattattttggaatctttg 1439  T
Q  151 aaagacacgattaagattaa--tttca--taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||||  ||||||||||||  ||||   |||||| |||||||||||| | | ||||||||||||||||||||| |||  ||||| ||||||||||||||    
T  1438 aaagactagattaagattaagttttctagtaggctcattttcaactaaaatagaatttgttttgttatgaaaataatctcaatttattggataataaata 1339  T
Q  247 tcaccaatatttttaattttggtgagg-acattattaggaac 287  Q
    |||| |||||||||||| || |||||| ||||||||||||||    
T  1338 tcacaaatatttttaatattagtgaggcacattattaggaac 1297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 360
Target Start/End: Complemental strand, 1270 - 1217
Alignment:
Q  309 ttcttcgataataaa--ttttttggcacattattaagaaaaaccaatttatttt 360  Q
    ||||||||||||||   |||||||||||||||||||||| ||||||||| ||||    
T  1270 ttcttcgataataatatttttttggcacattattaagaacaaccaatttttttt 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 64 - 404
Target Start/End: Complemental strand, 25330 - 24980
Alignment:
Q  64 tatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacacgatta 163  Q
    |||||||||||||| ||||||| ||||||| | ||||||||| |||||||||  ||||||||||||||||       |||||||| |||||||| |||||    
T  25330 tatcaaattcaattatgcaatcctttcaatcatttcaagaaagttgacattaatatattgatataatttatttttatggaacctttgaaagacaagatta 25231  T
Q  164 agattaatttc----ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttt 259  Q
     |||||| |||    ||| || ||||||||||||| |  ||||||| ||||| ||||| ||||||  |||||||||||||||||||||||||||||||||    
T  25230 ggattaacttctctaatatgccaattttcaactaaaatttaatttggtttgtcatgaatattatctcaatttcttggataataaatatcaccaatatttt 25131  T
Q  260 taattttggtgag-gacattattaggaac----cccnnnnnnnntatcgctaagttcttcgataataaattttttggcacattattaagaaaaacca-at 353  Q
    |||| || |||||  ||||||||||||||               |||| | |  |||||||||||||||| ||||||||||||||||||||||| || ||    
T  25130 taatattagtgagacacattattaggaacaaaggatccaaaaaatatcaccatcttcttcgataataaatattttggcacattattaagaaaaatcagat 25031  T
Q  354 ttattttatagagtgggtataaaaatctttgtgttatacgagagtatatat 404  Q
    || |||||||  ||| ||||| ||||||||||| |||| | | ||||||||    
T  25030 tttttttataaggtgtgtatagaaatctttgtgctataagggggtatatat 24980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 51 - 273
Target Start/End: Original strand, 8806198 - 8806423
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||| ||| | |||||||||||||||||||||| ||| ||| ||||||||||| |||||||||| ||| ||||||||||||       | |||||| |    
T  8806198 catgattttgtattatcaaattcaattttgcaatccttttaatcaattcaagaaagttgacattactataatgatataatttaaatttttgaaacctttg 8806297  T
Q  151 aaagacacgattaagattaatttcat----aggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||||| |||||| ||||||||| |    |  || |||||||||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  8806298 aaagacaagattaaaattaatttctttactatactcattttcaactaaaatataatttgttttgttat-aaaattatcccaatttcttggataataaata 8806396  T
Q  247 tcaccaatatttttaattttggtgagg 273  Q
    | || |||||||||||| || ||||||    
T  8806397 tgacaaatatttttaatattagtgagg 8806423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 58 - 287
Target Start/End: Original strand, 5121074 - 5121310
Alignment:
Q  58 ttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagaca 157  Q
    ||||| |||||||||||||| ||||||| ||||||  ||||||||||| ||||||| || ||||||||||||||||        ||||||| ||||||||    
T  5121074 ttgcattatcaaattcaattatgcaatcctttcaaacaattcaagaaagttgacatcactatattgatataatttatttttttagaacctttgaaagaca 5121173  T
Q  158 cgattaagatta--atttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcacc 251  Q
     |||||||||||  |||||     ||||||||||||||| ||| | | |||||||||| |||||||||||||   ||||| |||||||||||||||||||    
T  5121174 agattaagattataatttctctagtaggctaattttcaattaaaataaaatttgttttattatgaaaattatttcaattttttggataataaatatcacc 5121273  T
Q  252 aatatttttaattttggtgag-gacattattaggaac 287  Q
    |||||||||||| ||  ||||  ||||||||||||||    
T  5121274 aatatttttaatattattgagccacattattaggaac 5121310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 51 - 133
Target Start/End: Complemental strand, 23151631 - 23151549
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataattta 133  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||    
T  23151631 catgatcttgcaatatcaaattcaattttgcaatcctttcaatcaattcaagaaatttgacattacagtattgatataattta 23151549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 51 - 287
Target Start/End: Original strand, 13826094 - 13826340
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnn---ggaacct 147  Q
    |||||||||||| |||||||||||||| || |||| |||| || ||||||||||| |||||||||| ||||||||||||||||          ||||  |    
T  13826094 catgatcttgcattatcaaattcaattatgaaatcctttcgatcaattcaagaaagttgacattactatattgatataatttatttattttttggaattt 13826193  T
Q  148 tagaaagacacgattaagattaatttcat------aggcta-attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataa 240  Q
    | || ||||| ||||||||||||||| ||      || | | |||||||||||| | | |||||||||||||||||||||||||| ||||||||||||||    
T  13826194 ttgagagacaagattaagattaattt-atctagtaagcccatattttcaactaaaatagaatttgttttgttatgaaaattatcccaatttcttggataa 13826292  T
Q  241 taaatatcaccaatatttttaattttggtgag-gacattattaggaac 287  Q
    ||||||||| | ||||||||||| || |||||  ||||||||||||||    
T  13826293 taaatatcatcgatatttttaatattagtgagacacattattaggaac 13826340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 51 - 287
Target Start/End: Original strand, 38915594 - 38915834
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||| | ||| |||||||||||||||||||||| |||  || ||||| ||||| |||||||||| |||  |||||||||||       |||||||| |    
T  38915594 catgatttagcattatcaaattcaattttgcaatcctttttatcaattctagaaagttgacattactataacgatataatttaattttttggaacctttg 38915693  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    |||||||  ||||||| |||||||     |||||  |||||||||||| | |||  || ||||||||| |||||||||| ||||||||||||||||||||    
T  38915694 aaagacaacattaagactaatttctctagtaggcctattttcaactaaaatatatatttttttgttat-aaaattatcccaatttcttggataataaata 38915792  T
Q  247 tcaccaatatttttaattttggtgagg-acattattaggaac 287  Q
    | || ||||| |||||| || |||||| ||||||||||||||    
T  38915793 tgactaatatatttaatattagtgaggcacattattaggaac 38915834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 72 - 259
Target Start/End: Complemental strand, 37134932 - 37134741
Alignment:
Q  72 tcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttagaaagacacgattaagattaat 171  Q
    |||||| ||||||| ||||||| || |||||||| |||||||||| ||||||||||||||||       | |||||| |||||||| ||| || ||||||    
T  37134932 tcaattctgcaatcctttcaatcaaatcaagaaaattgacattactatattgatataatttattttttcgaaacctttgaaagacaagatcaaaattaat 37134833  T
Q  172 --ttca--taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttt 259  Q
      |||   ||||   |||||||||||| | |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||| ||||    
T  37134832 atttctagtaggtgtattttcaactaaaatataatttgttttgttatgaaaattattccaatttcttagataataaatatcaccaatttttt 37134741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 51 - 260
Target Start/End: Complemental strand, 29789770 - 29789557
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    ||||||||| || ||||| |||||||| ||||| | | | ||| |||||| |||| ||||| |||| ||||||||||||||||       | || ||| |    
T  29789770 catgatcttacattatcatattcaattgtgcaaccctcttaatcaattcatgaaagttgacgttactatattgatataatttatttttttgaaatctttg 29789671  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||| ||| ||||||||||||||||     ||| |  |||||||||||| | | |||||||||||||||||||||||| | ||||||||||||||||||||    
T  29789670 aaaaacaagattaagattaatttctctagtagacccattttcaactaaaatagaatttgttttgttatgaaaattattccaatttcttggataataaata 29789571  T
Q  247 tcaccaatattttt 260  Q
    ||||| ||||||||    
T  29789570 tcaccgatattttt 29789557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 51 - 263
Target Start/End: Complemental strand, 3654896 - 3654681
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||| ||||| | ||||||| ||||||||||||| || ||| ||||||||||| |||||||||| ||  ||||||||||||        ||||||| |    
T  3654896 catgattttgcattctcaaatttaattttgcaatctctttaatcaattcaagaaagttgacattactatgatgatataatttaatttttttgaacctttg 3654797  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||||| |||||| |||| ||||     ||||   |||||||||||| | ||||||| |||||| || |||||||||  ||||||||||||||||||||    
T  3654796 aaagacaagattaaaattagtttctctagtaggtccattttcaactaaaatataatttattttgtaat-aaaattatcttaatttcttggataataaata 3654698  T
Q  247 tcaccaatatttttaat 263  Q
    ||| |||||||||||||    
T  3654697 tcatcaatatttttaat 3654681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 13820884 - 13820989
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||||||||| | | | |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || |||||  ||||||||    
T  13820884 attttcaactaaaatagattttgttttgttatgaaaattatccaaatttcttgaataataaatatgaccaatatttttaatgttagtgagacacattatt 13820983  T
Q  282 aggaac 287  Q
    ||||||    
T  13820984 aggaac 13820989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 51 - 286
Target Start/End: Original strand, 43171283 - 43171518
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| ||||||||| || | ||||||| |||| || |||| |||||| |||||||||| |||||||| |||||||       |||||||| |    
T  43171283 catgatcttgcattatcaaatttaactatgcaatcatttcgatcaattaaagaaagttgacattactatattgatgtaatttatttttttggaacctttg 43171382  T
Q  151 aaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||| | |  |||||||||||||||     ||||   |||||||||||| | || |||||     ||||||||||||||  ||| | ||||||||||||||    
T  43171383 aaaaaaaaaattaagattaatttctctagtaggtccattttcaactaaaatatcatttg-----ttatgaaaattatctcaatatattggataataaata 43171477  T
Q  247 tcaccaatatttttaattttggtg-aggacattattaggaa 286  Q
    ||||||||||||||||| || ||| || |||||||||||||    
T  43171478 tcaccaatatttttaatattagtgaagcacattattaggaa 43171518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 5578623 - 5578728
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||||||||||||||| ||||||||||||||||||||||  | ||||||||||| || ||| || ||||||||    
T  5578623 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattatt 5578722  T
Q  282 aggaac 287  Q
    ||||||    
T  5578723 aggaac 5578728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 51 - 364
Target Start/End: Original strand, 16040069 - 16040388
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| |||||||||||||| ||||||| ||||||| |||||||||||  ||||||||  ||||||||||| |||        ||||  || |    
T  16040069 catgatcttgcattatcaaattcaattctgcaatcctttcaatcaattcaagaaagatgacattattatattgatatagttt---tttttggaa-ttttg 16040164  T
Q  151 aaagacacgattaagattaatttc----ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaata 246  Q
    ||||| |  |||||||||||| ||     |||||  |||||||| ||| | |  ||||||||||||||||||||||||  |||||||| ||||| |||||    
T  16040165 aaagataatattaagattaatatctctagtaggcccattttcaattaaaataagatttgttttgttatgaaaattatctcaatttctttgataaaaaata 16040264  T
Q  247 tcaccaatatttttaattttggtgag-gacattattaggaac-----cccnnnnnnnntatcgctaagttcttcgataataaattttttggcacattatt 340  Q
    |||||||||||||| |  || |||||  ||||||||||||||      ||        |||| |||| |||||| |||| ||||||||  ||||||||||    
T  16040265 tcaccaatattttttaaattagtgagacacattattaggaacaaagggcccaaaaaaatatcactaatttcttcaataacaaatttttgagcacattatt 16040364  T
Q  341 aagaaaaaccaatttattttatag 364  Q
    ||||| ||||||||| ||||||||    
T  16040365 aagaacaaccaattttttttatag 16040388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 150 - 287
Target Start/End: Complemental strand, 29149778 - 29149637
Alignment:
Q  150 gaaagacacgattaagattaatttca----taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaat 245  Q
    |||||||| ||||||||||||||||     |||||| |||||||||||| | | |||||| || |||||||||||||||  ||||| |||||||||||||    
T  29149778 gaaagacaagattaagattaatttctctagtaggctgattttcaactaaaataaaatttgctt-gttatgaaaattatctcaattttttggataataaat 29149680  T
Q  246 atcaccaatatttttaattttggtgagg-acattattaggaac 287  Q
    ||||| |||||||||||| ||  ||||| ||||||||||||||    
T  29149679 atcacaaatatttttaatattaatgaggcacattattaggaac 29149637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 200 - 287
Target Start/End: Original strand, 20892299 - 20892387
Alignment:
Q  200 aatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg-acattattaggaac 287  Q
    ||||||||||||| |||||||||||| || |||||||| ||||||||||| ||||||||||||| || |||||| ||||||||||||||    
T  20892299 aatttgttttgttttgaaaattatcccaaattcttggaaaataaatatcatcaatatttttaatattagtgaggcacattattaggaac 20892387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 38491126 - 38491021
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||||||||| | |||||||||||||||||||||||| ||| |||||  |||||||||||||||||  ||||||||||| || || ||  ||||||||    
T  38491126 attttcaactaaaatataatttgttttgttatgaaaattctcctaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 38491027  T
Q  282 aggaac 287  Q
    ||||||    
T  38491026 aggaac 38491021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 9409567 - 9409671
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||||||||||||||| |||||||||||||| |||||||  | ||||||||||| || ||| || ||||||||    
T  9409567 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataaaaaatatcgtcgatatttttaatattagtgaagcacattatt 9409666  T
Q  282 aggaa 286  Q
    |||||    
T  9409667 aggaa 9409671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 285
Target Start/End: Original strand, 13382615 - 13382718
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| ||||||| ||||||||||| ||||||||||||||||||||||  | ||||||||||| || ||| || ||||||||    
T  13382615 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattatt 13382714  T
Q  282 agga 285  Q
    ||||    
T  13382715 agga 13382718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 7850394 - 7850289
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgag-gacattatt 281  Q
    |||||||||||| | |||||||||||||||||||||||| ||  |||||  |||||||||||||||||  ||||||||||| || || ||  ||||||||    
T  7850394 attttcaactaaaatataatttgttttgttatgaaaattctctcaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 7850295  T
Q  282 aggaac 287  Q
    ||||||    
T  7850294 aggaac 7850289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 13820745 - 13820826
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataattt 132  Q
    |||||| ||||| |||||||||||||| ||||||| ||| ||| |||| |||||| |||||||||| |||||||||||||||    
T  13820745 catgatgttgcactatcaaattcaattatgcaatccttttaatcaatttaagaaagttgacattactatattgatataattt 13820826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 42879684 - 42879604
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||||||||| | | |||||| |||||||| |||||||||| |||||||||||||| |||||||  |||||||||||||    
T  42879684 attttcaactaaaatagaatttgctttgttataaaaattatcccaatttcttggataaaaaatatcgtcaatatttttaat 42879604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 20891273 - 20891396
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| ||||||| |||||| | ||||| ||||||  ||||||||||| |||||||| | ||||| ||||||||||       |||| ||| |    
T  20891273 catgatcttgcattatcaaactcaattcttcaatcctttcaaccaattcaagaaagttgacatttctatattaatataatttattttttgggaatctttg 20891372  T
Q  151 aaagacacgattaagattaatttc 174  Q
    |||||||  |||||||||||||||    
T  20891373 aaagacaaaattaagattaatttc 20891396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 2677053 - 2676949
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| |||||||||||||||||||  |||||||||||||||||||||  | ||||||||||| ||  || || ||||||||    
T  2677053 attttcaactaa-atagaatttgctttgttatgaaaattatcctcatttcttggataataaatatcgtcgatatttttaatattaatgaagcacattatt 2676955  T
Q  282 aggaac 287  Q
    ||||||    
T  2676954 aggaac 2676949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 13490479 - 13490374
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattatt 281  Q
    |||||||||||| | | |||||| |||||||||||||| |||  |||||||||||||||||||||   | ||||||||||| || ||| || ||||||||    
T  13490479 attttcaactaaaatagaatttgctttgttatgaaaatcatctcaatttcttggataataaatattgtcgatatttttaatattagtgaagtacattatt 13490380  T
Q  282 aggaac 287  Q
    ||||||    
T  13490379 aggaac 13490374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 23962939 - 23962874
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatc 248  Q
    |||||||||||| | | |||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  23962939 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatatc 23962874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 23151693 - 23151646
Alignment:
Q  10 agaacctgtgaaatgatcatgaatgtgtctcacatcggtttcatgatc 57  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  23151693 agaacctgtgaaatgatcatgaatgcgtcttacatcggtttcatgatc 23151646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 29150565 - 29150502
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacatt 114  Q
    |||||| ||||| |||||| ||||||| ||||||||||||||| ||||||||||| ||||||||    
T  29150565 catgatattgcattatcaacttcaattatgcaatcttttcaatcaattcaagaaagttgacatt 29150502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 283
Target Start/End: Original strand, 6769371 - 6769476
Alignment:
Q  176 taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg-a 274  Q
    |||||| ||||| |||||| | ||||||||||||||||| |||||| ||  ||||||||||||||||||||| | |||||| |||||| ||  ||||| |    
T  6769371 taggcttatttttaactaaaatataatttgttttgttat-aaaattctc--aatttcttggataataaatatgatcaatatatttaatattattgaggca 6769467  T
Q  275 cattattag 283  Q
    |||||||||    
T  6769468 cattattag 6769476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 18889131 - 18889054
Alignment:
Q  209 tgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattattagga 285  Q
    ||||||||||||||||  ||||||||||||||||||||||  | ||||||||||| || ||| || ||||||||||||    
T  18889131 tgttatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattattagga 18889054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 309 - 425
Target Start/End: Complemental strand, 18889025 - 18888907
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaatttattttat---agagtgggtataaaaatctttgtgttatacgagagtatatata 405  Q
    ||||||||||||||||||||  ||| ||||| ||||| ||||||||| ||||||   || |||  |||| |||| ||||||||| | | || ||||| ||    
T  18889025 ttcttcgataataaatttttgagcatattatcaagaacaaccaattttttttataggagggtgtatatagaaatttttgtgttacatggga-tatatcta 18888927  T
Q  406 acaaatctcgctaaaagggc 425  Q
    ||||||||| ||||||||||    
T  18888926 acaaatctcactaaaagggc 18888907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 13826366 - 13826418
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaatttatttta 361  Q
    |||||||||| |||||||||  ||||||||||||||| ||||||||| |||||    
T  13826366 ttcttcgatagtaaatttttgagcacattattaagaacaaccaatttttttta 13826418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 32698846 - 32698770
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttt 259  Q
    |||||||||||| | ||  |||||||||||| ||| ||| ||  |||||||| |||||||||||| |||||||||||    
T  32698846 attttcaactaaaatatcgtttgttttgttacgaagattctcacaatttcttagataataaatattaccaatatttt 32698770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 352
Target Start/End: Original strand, 9409695 - 9409742
Alignment:
Q  305 taagttcttcgataataaattttttggcacattattaagaaaaaccaa 352  Q
    ||| ||||||||||||||||||||| ||| ||||||||||| ||||||    
T  9409695 taatttcttcgataataaattttttagcatattattaagaacaaccaa 9409742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 431
Target Start/End: Complemental strand, 40583603 - 40583480
Alignment:
Q  309 ttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatagagtgggtataaa---aatctttgtgttatacgagagtatatata 405  Q
    |||||||||||||||||||||  |||||||| |||||||| ||| || |||||||| | |||||||||   ||  ||||||||||  |||  ||||||||    
T  40583603 ttcttcgataataaatttttt-ccacattatcaagaaaaatcaaatt-ttttatagggagggtataaatagaaattttgtgttatttgaggatatatata 40583506  T
Q  406 acaaatctcgctaaaagggcttaaaa 431  Q
     |||||||||  |||||||| |||||    
T  40583505 gcaaatctcgtaaaaagggcctaaaa 40583480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 43323727 - 43323802
Alignment:
Q  184 ttttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttt 259  Q
    ||||||||||| | ||  |||||||||||| ||| ||| ||  |||||||| |||||||||||| |||||||||||    
T  43323727 ttttcaactaaaatatcgtttgttttgttacgaagattctcacaatttcttagataataaatattaccaatatttt 43323802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 260
Target Start/End: Original strand, 16686724 - 16686770
Alignment:
Q  214 tgaaaattatccaaatttcttggataataaatatcaccaatattttt 260  Q
    ||||||| |||| ||||||| |||||||||||||||| |||||||||    
T  16686724 tgaaaatcatcccaatttctcggataataaatatcactaatattttt 16686770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 362
Target Start/End: Original strand, 38915878 - 38915916
Alignment:
Q  324 ttttttggcacattattaagaaaaaccaatttattttat 362  Q
    |||||| ||||||||||||||||||||||||| ||||||    
T  38915878 ttttttcgcacattattaagaaaaaccaattttttttat 38915916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 29789513 - 29789468
Alignment:
Q  299 tatcgctaagttcttcgataataaattttttggcacattattaaga 344  Q
    |||| |||| |||||||||||||||||||| | |||||||||||||    
T  29789513 tatcactaatttcttcgataataaatttttggacacattattaaga 29789468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 345
Target Start/End: Complemental strand, 37134742 - 37134709
Alignment:
Q  312 ttcgataataaattttttggcacattattaagaa 345  Q
    |||||||||||||||||||||||||| |||||||    
T  37134742 ttcgataataaattttttggcacattgttaagaa 37134709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 405
Target Start/End: Complemental strand, 3654639 - 3654527
Alignment:
Q  299 tatcgctaagttcttcgataataaatttttt--ggcacattattaagaaaaaccaatttattttatagagtggg----tataaaaatctttgtgttatac 392  Q
    |||| |||| |||||||||||||| ||||||  |||||||| ||||||| |||||| || ||||||| || |||    |||| ||||||||||| ||||     
T  3654639 tatcactaatttcttcgataataatttttttttggcacatttttaagaacaaccaaatttttttataaagagggttaatatagaaatctttgtgatatat 3654540  T
Q  393 gagagtatatata 405  Q
    | | |||||||||    
T  3654539 gggggtatatata 3654527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 51 - 243
Target Start/End: Original strand, 98229 - 98425
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||||| |||||||||||| ||||||||| |||| || |||||||||||||||||||||  ||||||||||||||||       |||| ||| |    
T  98229 catgatcttgcattatcaaattcaaatttgcaatcctttcgatcaattcaagaaatttgacattaatatattgatataatttatttttttggaatctttg 98328  T
Q  151 aaagacacgattaagattaatttc-atag---gctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataa 243  Q
    ||||||| ||||||||||||||||  |||   ||| |||||||||||| | | ||||| |||| |||||||||| |||  ||||||||| |||||||    
T  98329 aaagacaagattaagattaatttctctagcatgctcattttcaactaaaatagaatttattttattatgaaaataatctcaatttcttgaataataa 98425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1364 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold1364
Description:

Target: scaffold1364; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 51 - 243
Target Start/End: Complemental strand, 1073 - 873
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataatttannnnnnnggaaccttag 150  Q
    |||||||||| | |||||||||||| ||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||       |||| ||| |    
T  1073 catgatcttgtattatcaaattcaaatttgcaatcatttcaatcaattcaagaaatttgacattactatattgatataatttatttttttggaatctttg 974  T
Q  151 aaagac----acgattaagattaatttc----ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataata 242  Q
    ||||||       |||||||||||||||     |||||| |||||||||||| | | ||||||||||||||||||||| |||  ||||||| ||||||||    
T  973 aaagactatatatattaagattaatttctcaggtaggctcattttcaactaaaatagaatttgttttgttatgaaaataatctcaatttctaggataata 874  T
Q  243 a 243  Q
    |    
T  873 a 873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 59; Significance: 8e-25; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 2398 - 2549
Alignment:
Q  141 ggaaccttagaaagacacgattaagattaatttc----ataggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttgg 236  Q
    |||| ||| |||||||| ||||||||||||||||    ||||| | |||||||||||| | |||||||||||||||||| ||||||||  ||||| |||     
T  2398 ggaaactttgaaagacaagattaagattaatttctataataggttcattttcaactaaaatataatttgttttgttatgcaaattatctcaatttattga 2497  T
Q  237 ataataaatatcaccaatatttttaattttggtg-aggacattattaggaac 287  Q
    |||||||||||||| |||||||||||| || ||| |  ||||||||||||||    
T  2498 ataataaatatcactaatatttttaatattagtgaaacacattattaggaac 2549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 1120 - 1201
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataattta 133  Q
    |||||||||| | |||||||||||| | | || || ||||||| ||||||||||| |||||||||| ||||| || |||||||    
T  1120 catgatcttgtattatcaaattcaactataca-tcctttcaatcaattcaagaaagttgacattactatattaatgtaattta 1201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0743 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 263
Target Start/End: Original strand, 3311 - 3398
Alignment:
Q  176 taggctaattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||| ||| ||||| || |||||||||||||||  |||||||||||    
T  3311 taggccaattttcaactaaaatataatttgttttgttatgaaaattctcccaattttttagataataaatatcacatatatttttaat 3398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 47; Significance: 1e-17; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 88121 - 88227
Alignment:
Q  182 aattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattat 280  Q
    ||||||||||||| | | |||||| ||||||||||||||||||  |||||||||||||||||||||   | ||||||||||| || ||| || |||||||    
T  88121 aattttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatattgtcgatatttttaatattagtgaagtacattat 88220  T
Q  281 taggaac 287  Q
    |||||||    
T  88221 taggaac 88227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 88597 - 88703
Alignment:
Q  182 aattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattat 280  Q
    ||||||||||||| | | |||||| ||||||||||||||||||  |||||||||||||||||||||   | ||||||||||| || ||| || |||||||    
T  88597 aattttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatattgtcgatatttttaatattagtgaagtacattat 88696  T
Q  281 taggaac 287  Q
    |||||||    
T  88697 taggaac 88703  T

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Target: scaffold0016; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 89073 - 89179
Alignment:
Q  182 aattttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtg-aggacattat 280  Q
    ||||||||||||| | | |||||| ||||||||||||||||||  |||||||||||||||||||||   | ||||||||||| || ||| || |||||||    
T  89073 aattttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatattgtcgatatttttaatattagtgaagtacattat 89172  T
Q  281 taggaac 287  Q
    |||||||    
T  89173 taggaac 89179  T

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Target: scaffold0016; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 364
Target Start/End: Original strand, 87648 - 87834
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaattttggtgagg-acattatt 281  Q
    |||||||||||| | | |||||| || |||||||||||||||  |||||||||||||||||||||   | ||||||||||| || |||| | ||||||||    
T  87648 attttcaactaaaatagaatttgcttcgttatgaaaattatctcaatttcttggataataaatattgtcgatatttttaatattagtgaagtacattatt 87747  T
Q  282 aggaaccc----cnnnnnnnntatcgctaagttcttcgataataaattttttggcacattattaagaaaaaccaatttattttatag 364  Q
    ||||||      |        |||| | || |||||||||||||||||||  |||| ||||||||||| ||||||||| ||||||||    
T  87748 aggaacaaagggcccaaaaaatatcacaaatttcttcgataataaattttcgggcatattattaagaacaaccaattttttttatag 87834  T

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Target: scaffold0137 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 21313 - 21395
Alignment:
Q  51 catgatcttgcaatatcaaattcaattttgcaatcttttcaattaattcaagaaatttgacattacaatattgatataattta 133  Q
    |||||||||||| |||||||||||||| | ||||  ||||||| ||||||||||| || ||||||  ||||||||||||||||    
T  21313 catgatcttgcattatcaaattcaattattcaattctttcaatcaattcaagaaagttcacattaatatattgatataattta 21395  T

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Target: scaffold0137; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 21455 - 21536
Alignment:
Q  183 attttcaactaagaaataatttgttttgttatgaaaattatccaaa-tttcttggataataaatatcaccaatatttttaat 263  Q
    ||||| |||||| | | ||||| ||||||||||| |||||||| || ||| |||||| |||||||||||||| |||||||||    
T  21455 atttttaactaaaatagaatttattttgttatgagaattatcccaacttttttggatgataaatatcaccaacatttttaat 21536  T

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Target: scaffold0093 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 51000 - 50937
Alignment:
Q  200 aatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaat 263  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||||||||  | |||||||||||    
T  51000 aatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaat 50937  T

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Target: scaffold0064 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 60557 - 60610
Alignment:
Q  197 aataatttgttttgttatgaaaattatccaaatttcttggataataaatatcacc 251  Q
    ||||||||||||||||||||||||||||  || ||||||| ||||||||||||||    
T  60557 aataatttgttttgttatgaaaattatctcaa-ttcttgggtaataaatatcacc 60610  T

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