View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17452_high_74 (Length: 246)
Name: NF17452_high_74
Description: NF17452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17452_high_74 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 32313659 - 32313894
Alignment:
| Q |
1 |
tttcttatcaacaacagttaccagataattgactcatggaaaactacaatacaacttgtccaataatttgatttgannnnnnnnaagaagcaaatcaatt |
100 |
Q |
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| T |
32313659 |
tttcttatcaacaacagttaccagataattgactcatggaaaactacaatacaacttgtccaataatttgattttattttttttaagaagcaaatcaact |
32313758 |
T |
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| Q |
101 |
atattaaagataatctaataaataagcataaggcatgttttttggtaaataaaaagcaccaggtccatttcttgttaacttgaaactacatagtggctag |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32313759 |
atattaaagataatctaataaataagcataagacatgttttttggtaaataaaaagcaccaggtccatttcttgttaacttgaaactacatagtggctag |
32313858 |
T |
|
| Q |
201 |
gaccactaaaaacaataataacattcagcacctatg |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
32313859 |
gaccactaaaaacaataataacattcagcacctatg |
32313894 |
T |
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