View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17452_low_36 (Length: 403)

Name: NF17452_low_36
Description: NF17452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17452_low_36
NF17452_low_36
[»] chr6 (33 HSPs)
chr6 (1-185)||(15528057-15528240)
chr6 (1-184)||(17250057-17250238)
chr6 (1-172)||(23897823-23897993)
chr6 (1-184)||(19748333-19748515)
chr6 (3-184)||(7223519-7223692)
chr6 (5-184)||(26053247-26053425)
chr6 (5-184)||(26073300-26073478)
chr6 (1-184)||(30912359-30912541)
chr6 (1-184)||(17543687-17543869)
chr6 (10-184)||(7918337-7918510)
chr6 (45-184)||(27233268-27233406)
chr6 (13-184)||(11327530-11327700)
chr6 (1-184)||(21354748-21354922)
chr6 (1-184)||(17103202-17103377)
chr6 (58-184)||(6943464-6943589)
chr6 (12-176)||(22498843-22499006)
chr6 (24-181)||(2912218-2912373)
chr6 (19-189)||(10508989-10509157)
chr6 (105-184)||(18491087-18491166)
chr6 (100-184)||(5422793-5422877)
chr6 (107-182)||(3573984-3574059)
chr6 (107-190)||(10958239-10958322)
chr6 (6-61)||(27614594-27614651)
chr6 (1-49)||(7918295-7918343)
chr6 (109-177)||(8545019-8545087)
chr6 (46-85)||(4841718-4841757)
chr6 (109-147)||(4841973-4842011)
chr6 (107-184)||(12245109-12245186)
chr6 (45-85)||(3573788-3573828)
chr6 (113-185)||(7359848-7359919)
chr6 (45-85)||(30912294-30912334)
chr6 (105-181)||(33583779-33583855)
chr6 (51-79)||(33593057-33593085)
[»] chr4 (30 HSPs)
chr4 (1-184)||(36120824-36121006)
chr4 (1-184)||(5361910-5362092)
chr4 (1-184)||(8889228-8889410)
chr4 (1-184)||(9770112-9770294)
chr4 (3-184)||(9911360-9911541)
chr4 (1-184)||(13023567-13023752)
chr4 (1-183)||(17466080-17466261)
chr4 (1-182)||(5375666-5375846)
chr4 (1-184)||(10142899-10143081)
chr4 (30-184)||(13551598-13551751)
chr4 (1-184)||(37240262-37240439)
chr4 (58-185)||(8011220-8011346)
chr4 (1-184)||(23064908-23065092)
chr4 (105-183)||(7044728-7044806)
chr4 (89-184)||(4156763-4156857)
chr4 (81-184)||(18459735-18459837)
chr4 (105-180)||(6347114-6347189)
chr4 (105-184)||(24719517-24719596)
chr4 (116-184)||(7452420-7452488)
chr4 (133-184)||(9149813-9149864)
chr4 (134-184)||(5846458-5846508)
chr4 (45-85)||(24719776-24719816)
chr4 (81-180)||(7815561-7815659)
chr4 (48-85)||(4157053-4157090)
chr4 (119-184)||(46664421-46664486)
chr4 (45-85)||(8011024-8011064)
chr4 (57-85)||(8889427-8889455)
chr4 (57-85)||(9770313-9770341)
chr4 (116-184)||(18327343-18327411)
chr4 (116-184)||(18437986-18438054)
[»] chr8 (29 HSPs)
chr8 (1-184)||(5922049-5922231)
chr8 (1-184)||(11879600-11879782)
chr8 (1-184)||(11897016-11897198)
chr8 (1-182)||(19704402-19704583)
chr8 (1-183)||(29384264-29384444)
chr8 (1-182)||(15294672-15294852)
chr8 (1-182)||(15475041-15475221)
chr8 (1-185)||(45403028-45403211)
chr8 (1-180)||(31424167-31424345)
chr8 (1-180)||(3094190-3094378)
chr8 (1-135)||(23142224-23142357)
chr8 (5-172)||(22910153-22910319)
chr8 (1-180)||(7489230-7489409)
chr8 (1-184)||(17646993-17647177)
chr8 (1-145)||(6810861-6811003)
chr8 (1-184)||(27836411-27836593)
chr8 (1-180)||(6292289-6292467)
chr8 (4-100)||(32424415-32424511)
chr8 (1-95)||(9212202-9212296)
chr8 (109-184)||(477101-477176)
chr8 (81-184)||(24056595-24056697)
chr8 (79-184)||(15761464-15761568)
chr8 (121-184)||(17788372-17788435)
chr8 (57-175)||(15231733-15231850)
chr8 (45-85)||(29384200-29384240)
chr8 (137-180)||(23136353-23136396)
chr8 (57-85)||(7489183-7489211)
chr8 (45-85)||(8582244-8582284)
chr8 (45-85)||(17647198-17647238)
[»] chr1 (35 HSPs)
chr1 (1-184)||(13276213-13276395)
chr1 (1-185)||(23528655-23528838)
chr1 (1-184)||(9352010-9352192)
chr1 (3-184)||(9954984-9955164)
chr1 (6-182)||(12513283-12513458)
chr1 (6-182)||(19009898-19010073)
chr1 (1-184)||(9327160-9327344)
chr1 (1-189)||(13100186-13100373)
chr1 (1-177)||(16125402-16125580)
chr1 (4-183)||(42180015-42180193)
chr1 (1-184)||(18304758-18304940)
chr1 (1-184)||(9128787-9128969)
chr1 (1-184)||(25146716-25146897)
chr1 (1-188)||(17869697-17869878)
chr1 (1-184)||(21846221-21846397)
chr1 (45-184)||(41032661-41032799)
chr1 (1-95)||(32881415-32881509)
chr1 (1-84)||(47785958-47786041)
chr1 (3-100)||(18228284-18228380)
chr1 (109-184)||(30619075-30619150)
chr1 (50-184)||(17055995-17056128)
chr1 (103-185)||(14074418-14074500)
chr1 (100-184)||(12800626-12800710)
chr1 (105-184)||(18337572-18337650)
chr1 (118-184)||(34478833-34478899)
chr1 (120-181)||(27917517-27917578)
chr1 (45-85)||(13100391-13100431)
chr1 (45-82)||(18228468-18228505)
chr1 (105-173)||(8772715-8772783)
chr1 (57-85)||(9327114-9327142)
chr1 (1-41)||(12002819-12002859)
chr1 (57-85)||(17869650-17869678)
chr1 (45-85)||(21846162-21846202)
chr1 (2-46)||(27917319-27917363)
chr1 (51-83)||(39845162-39845194)
[»] chr2 (30 HSPs)
chr2 (3-184)||(31237926-31238106)
chr2 (5-184)||(1404783-1404961)
chr2 (11-184)||(30432419-30432591)
chr2 (1-182)||(31578007-31578186)
chr2 (1-184)||(36429848-36430030)
chr2 (1-183)||(35565901-35566082)
chr2 (13-184)||(20063714-20063884)
chr2 (13-184)||(15588809-15588978)
chr2 (57-184)||(23863324-23863450)
chr2 (1-101)||(1690675-1690775)
chr2 (56-185)||(19491854-19491983)
chr2 (82-184)||(1690790-1690891)
chr2 (50-182)||(25539222-25539353)
chr2 (105-184)||(16766710-16766789)
chr2 (80-148)||(31023259-31023326)
chr2 (133-184)||(19245153-19245204)
chr2 (45-85)||(13502561-13502601)
chr2 (45-85)||(15588742-15588782)
chr2 (105-157)||(34841583-34841635)
chr2 (45-85)||(35565845-35565885)
chr2 (105-184)||(5395698-5395777)
chr2 (120-183)||(15516624-15516687)
chr2 (45-84)||(27406993-27407032)
chr2 (81-174)||(13503069-13503162)
chr2 (105-183)||(34577702-34577780)
chr2 (1-46)||(25539093-25539138)
chr2 (1-46)||(34841717-34841762)
chr2 (1-41)||(974467-974507)
chr2 (45-85)||(1690616-1690656)
chr2 (140-184)||(29660893-29660937)
[»] chr7 (36 HSPs)
chr7 (1-188)||(4247352-4247538)
chr7 (1-183)||(5058530-5058711)
chr7 (1-184)||(44944792-44944978)
chr7 (1-184)||(14055251-14055433)
chr7 (1-184)||(14365279-14365461)
chr7 (3-184)||(5715290-5715469)
chr7 (1-185)||(24990018-24990201)
chr7 (4-184)||(27221418-27221597)
chr7 (1-184)||(24725424-24725606)
chr7 (1-184)||(26281257-26281438)
chr7 (1-182)||(8346479-8346660)
chr7 (30-184)||(9685220-9685373)
chr7 (15-184)||(8330006-8330174)
chr7 (1-146)||(17811385-17811529)
chr7 (13-175)||(11324988-11325148)
chr7 (15-184)||(8343761-8343929)
chr7 (21-184)||(22687631-22687793)
chr7 (30-184)||(7730319-7730471)
chr7 (59-177)||(8571250-8571367)
chr7 (57-184)||(11326386-11326512)
chr7 (45-184)||(39182260-39182397)
chr7 (1-178)||(20570832-20571002)
chr7 (25-156)||(27509914-27510044)
chr7 (45-144)||(1977692-1977790)
chr7 (1-184)||(26617423-26617605)
chr7 (1-184)||(6916786-6916961)
chr7 (61-184)||(21846433-21846554)
chr7 (100-185)||(30294174-30294256)
chr7 (103-184)||(8630006-8630087)
chr7 (91-184)||(21157811-21157903)
chr7 (45-85)||(4247557-4247597)
chr7 (45-85)||(5715486-5715526)
chr7 (45-85)||(6916980-6917020)
chr7 (1-41)||(21846393-21846433)
chr7 (118-180)||(4574475-4574537)
chr7 (45-85)||(24989661-24989701)
[»] chr3 (37 HSPs)
chr3 (17-184)||(29067284-29067450)
chr3 (1-184)||(28745770-28745958)
chr3 (1-181)||(39427905-39428084)
chr3 (21-179)||(17064326-17064483)
chr3 (1-184)||(24620147-24620332)
chr3 (1-184)||(8156077-8156260)
chr3 (30-184)||(20756039-20756192)
chr3 (27-183)||(3449265-3449419)
chr3 (1-166)||(22494735-22494892)
chr3 (21-175)||(21963438-21963590)
chr3 (21-175)||(21985874-21986026)
chr3 (2-94)||(42696936-42697028)
chr3 (57-184)||(30727694-30727820)
chr3 (11-184)||(22137278-22137449)
chr3 (50-184)||(24649684-24649818)
chr3 (1-95)||(15515203-15515297)
chr3 (31-184)||(22356029-22356182)
chr3 (83-184)||(17796377-17796477)
chr3 (83-184)||(17796486-17796586)
chr3 (83-184)||(19104817-19104917)
chr3 (83-184)||(19104926-19105026)
chr3 (105-184)||(27676356-27676435)
chr3 (83-180)||(17796272-17796368)
chr3 (83-180)||(19104712-19104808)
chr3 (37-184)||(25870350-25870505)
chr3 (105-184)||(15806556-15806634)
chr3 (79-183)||(28135723-28135826)
chr3 (105-174)||(10872996-10873065)
chr3 (136-180)||(42696870-42696914)
chr3 (45-85)||(42697049-42697089)
chr3 (12-55)||(9152941-9152984)
chr3 (107-180)||(25614037-25614110)
chr3 (45-85)||(6136457-6136497)
chr3 (51-79)||(6861033-6861061)
chr3 (1-41)||(8592359-8592399)
chr3 (124-184)||(13005927-13005987)
chr3 (45-85)||(25870210-25870250)
[»] chr5 (26 HSPs)
chr5 (1-183)||(23172375-23172560)
chr5 (1-189)||(21059103-21059289)
chr5 (5-184)||(43234868-43235046)
chr5 (1-183)||(18843716-18843897)
chr5 (2-184)||(19578942-19579123)
chr5 (1-184)||(18051480-18051659)
chr5 (17-184)||(22645681-22645848)
chr5 (1-173)||(41688612-41688782)
chr5 (1-176)||(27340137-27340307)
chr5 (21-187)||(38158221-38158386)
chr5 (58-185)||(20923717-20923843)
chr5 (1-135)||(20320992-20321124)
chr5 (1-135)||(19979648-19979781)
chr5 (186-324)||(18260764-18260901)
chr5 (110-182)||(19042444-19042516)
chr5 (118-182)||(20320926-20320990)
chr5 (111-180)||(24106645-24106714)
chr5 (42-78)||(19042406-19042442)
chr5 (45-85)||(21059045-21059085)
chr5 (133-184)||(24647939-24647990)
chr5 (1-39)||(24648160-24648198)
chr5 (1-39)||(26021464-26021502)
chr5 (1-41)||(19377742-19377782)
chr5 (57-85)||(23172328-23172356)
chr5 (1-41)||(41427548-41427588)
chr5 (57-85)||(41688566-41688594)
[»] scaffold0186 (1 HSPs)
scaffold0186 (1-184)||(8443-8625)
[»] scaffold0417 (1 HSPs)
scaffold0417 (1-184)||(7402-7584)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-184)||(93652-93833)
scaffold0042 (45-85)||(93593-93633)
[»] scaffold0510 (1 HSPs)
scaffold0510 (45-172)||(91-218)
[»] scaffold0048 (1 HSPs)
scaffold0048 (106-184)||(48839-48917)
[»] scaffold0603 (2 HSPs)
scaffold0603 (83-184)||(9049-9149)
scaffold0603 (1-46)||(8907-8952)
[»] scaffold0036 (1 HSPs)
scaffold0036 (105-184)||(37216-37295)
[»] scaffold0016 (1 HSPs)
scaffold0016 (11-62)||(58739-58790)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-41)||(38491-38531)


Alignment Details
Target: chr6 (Bit Score: 129; Significance: 1e-66; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 15528057 - 15528240
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| || |    
T  15528057 taaatatatgttataaatggtatatagttataaatgacttagtttataagaaatcgtaaaatcgcaatcgaaatcgatggattttgtctattttaaga-t 15528155  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaatt 185  Q
    | ||||||| |||||||||||| |||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  15528156 tctactatgaatttaagtcgttaaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaatt 15528240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 17250238 - 17250057
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||| ||| |    
T  17250238 taaatatatattataaatt-tatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgaattttgcctattttggga-t 17250141  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | || |||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||| ||||||||    
T  17250140 tctagtatggatttaagtcgttgaaggtgaagaaagttgcaaaatcctggattttaggatttaagtcgggattttaacaacaat 17250057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 23897993 - 23897823
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| | |||||||| || |    
T  23897993 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctatttta-gaat 23897895  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggat 172  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||  |||||| |||||||||||||||    
T  23897894 tttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgcattttaggatttaagtcgggat 23897823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 19748515 - 19748333
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||| || |    
T  19748515 taaatatattttataaatgatatatagtcttaaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcctattttaaga-t 19748417  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | ||||| |||||| |||| || |||||||||||| || ||||||||| |||| ||||||||||||||||||||||| ||||||    
T  19748416 tctactacggatttgagtcattaaaggtgaagaaaatctcaaaatcctggattgtaagatttaagtcgggattttgaaaacaat 19748333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 7223692 - 7223519
Alignment:
Q  3 aatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttt 102  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||  |||||| ||| ||     
T  7223692 aatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttatttt-ggaattc 7223594  T
Q  103 tactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||||||||||       ||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  7223593 tactatggatttaag-------aggtgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaat 7223519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 5 - 184
Target Start/End: Original strand, 26053247 - 26053425
Alignment:
Q  5 tatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggattttta 104  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||  |||||||||| |||| ||||||  |||||| ||||| | |    
T  26053247 tatatgttataaatggtatatagtcataaataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattct-a 26053345  T
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
     |||| |||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26053346 ttatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 5 - 184
Target Start/End: Original strand, 26073300 - 26073478
Alignment:
Q  5 tatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggattttta 104  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||  |||||||||| |||| ||||||  |||||| ||||| | |    
T  26073300 tatatgttataaatggtatatagtcataaataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattct-a 26073398  T
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
     |||| |||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26073399 ttatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26073478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 30912359 - 30912541
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| | ||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| |||||||  || |    
T  30912359 taaatatatgtgataaatgatatataatcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatctatggattttgcctattttgtga-t 30912457  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | || ||||||||| |||||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||||||||    
T  30912458 tctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaat 30912541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 17543687 - 17543869
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||| ||  ||||||  ||||||| || |    
T  17543687 taaatatatgttataaatggtatatagtcgtaaatgacttagtttataagaaatagtaaaatcgcaatcaaaatccatagattttgcttattttaaga-t 17543785  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | |||||||||||| |||||||||| ||||| ||||||||||||||||  |||||| ||||||||||| |||||||||||||||    
T  17543786 tctactatggatttgagtcgttgaaagtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgagattttgacaacaat 17543869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 10 - 184
Target Start/End: Original strand, 7918337 - 7918510
Alignment:
Q  10 tttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatg 109  Q
    |||||||||| ||||||||||||||||||||| ||||||| |||||  |||||| ||||||||||||||  ||||||  ||| |||||||||| ||||||    
T  7918337 tttataaatgatatatagtcataaatgacttaatttataaaaaatcgcaaaatcccaatcaaaatcgattgattttgcttatgttaggatttt-actatg 7918435  T
Q  110 gatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||||||||||||||||| ||||||||||||||||  ||||||  ||||||||||||||||||||||||||    
T  7918436 gatttaagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 184
Target Start/End: Original strand, 27233268 - 27233406
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaa 144  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||| |||||    
T  27233268 tataagaaatcataaaatcgcaatcaaaatcgatggattttgtctattttgggattct-actatggatttaagtcgttgaaggtgaagaaagtcacaaaa 27233366  T
Q  145 tccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||| ||||||| |||||||||||| | ||||||||||||    
T  27233367 tcctggattttaggatttaagtcggtagtttgacaacaat 27233406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 11327530 - 11327700
Alignment:
Q  13 ataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggat 112  Q
    |||||||||||| |||||||||||| |||||| |||||||| | |||||||||||| ||||||||||||||||| ||||||| ||| || ||||||||||    
T  11327530 ataaatggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttggga-ttctactatggat 11327628  T
Q  113 ttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||| |||||| ||||||||  ||||||| | | ||||||| | |||||||||||||||||||||||||    
T  11327629 ttaagtccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaat 11327700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 21354922 - 21354748
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||| ||||| |||||||||||||| ||| |    
T  21354922 taaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaataaaaaacgatggattttgtctattttggga-t 21354824  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | ||| |||||||||||||||||||||| |||||||        |||  ||||||| ||||||||| |||||||||||||||||    
T  21354823 tctaccatggatttaagtcgttgaaggtaaagaaag--------tccaggattttaggatttaagttgggattttgacaacaat 21354748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 17103377 - 17103202
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| | ||||||| ||||||||| ||||| ||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||| |    
T  17103377 taaatatatgtcataaatgatatatagtcgtaaataacttagtttataagaaatcgtaaaatcgtaatcaaaatcgatggattttgtctattttggga-t 17103279  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | ||||||| |||| |||||||||| ||       |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  17103278 tctactatgcatttgagtcgttgaaagt-------gtcgcaaaatcctgaattttaagatttaagtcgggattttgacaacaat 17103202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 58 - 184
Target Start/End: Original strand, 6943464 - 6943589
Alignment:
Q  58 aaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaa 157  Q
    |||||||||||||||||||||||||||||||||||||  |||| | ||||| ||||| |||||||||||||||||||||||||||||||||  ||||||     
T  6943464 aaaatcgcaatcaaaatcgatgaattttgtctattttgagattct-actatcgatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttag 6943562  T
Q  158 gatttaagtcgggattttgacaacaat 184  Q
    |||||||||||||||||||||||||||    
T  6943563 gatttaagtcgggattttgacaacaat 6943589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 176
Target Start/End: Original strand, 22498843 - 22499006
Alignment:
Q  12 tataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatgga 111  Q
    |||| |||||||||||||||||||||||| |||||||||||||| |||||| ||||| |||||||||| ||||||||||||||  || || |||||||||    
T  22498843 tatagatggtatatagtcataaatgacttcgtttataagaaatcgtaaaattgcaattaaaatcgatggattttgtctattttgaga-ttgtactatgga 22498941  T
Q  112 tttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttg 176  Q
    ||| ||||||| ||||||||||||||||||||||  | || |||| ||||| ||| |||||||||    
T  22498942 tttgagtcgttcaaggtgaagaaagtcgcaaaattgtggaatttaggattttagttgggattttg 22499006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 181
Target Start/End: Original strand, 2912218 - 2912373
Alignment:
Q  24 atagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttg 123  Q
    ||||||||||||||||| |||||||| ||||| |||||| |||||||||||||||||||||||  ||||||| || || |||||| ||||| | ||||||    
T  2912218 atagtcataaatgactttgtttataaaaaatcgtaaaattgcaatcaaaatcgatgaattttgcttattttaaga-ttctactat-gatttgaatcgttg 2912315  T
Q  124 aaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaac 181  Q
    ||| || ||||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  2912316 aagatggagaaagttgcaaaatcctaaattttaagatttaagtcgggattttgacaac 2912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 10508989 - 10509157
Alignment:
Q  19 ggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagt 118  Q
    |||||||||| |||||||||||||||||||| || || |||||||| ||||||||||||||||||||| ||||||| ||| || ||||||  |||| |||    
T  10508989 ggtatatagt-ataaatgacttagtttataataagtcgtaaaatcgtaatcaaaatcgatgaattttgcctattttggga-ttctactataaatttgagt 10509086  T
Q  119 cgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaattgtta 189  Q
    | ||||| |||||||||||| |||| | ||  |||||| |||||||||| |||||||||||| ||| ||||    
T  10509087 cattgaatgtgaagaaagtcacaaatttctgaattttaggatttaagtctggattttgacaataatggtta 10509157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 18491087 - 18491166
Alignment:
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||||| |||||||||||||||| ||||  ||||||| || ||||||| |||||||||||||||||||||| ||||    
T  18491087 ctatggatttgagtcgttgaaggtgaataaagatgcaaaattctggattttaggatttaagtcgggattttgacagcaat 18491166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 100 - 184
Target Start/End: Original strand, 5422793 - 5422877
Alignment:
Q  100 ttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||| |||| ||||| |||||||||||||||| ||||| |||||||| |  ||||||  ||||||||||||||||||||||||||    
T  5422793 ttttgctatagatttgagtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaacaat 5422877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 3573984 - 3574059
Alignment:
Q  107 atggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaaca 182  Q
    |||||||| ||||||||||||||||||||||||| |||| || |||||||  ||||||||||| ||||||| ||||    
T  3573984 atggatttgagtcgttgaaggtgaagaaagtcgcgaaattctggattttagaatttaagtcggaattttgaaaaca 3574059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 10958239 - 10958322
Alignment:
Q  107 atggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaattgttac 190  Q
    |||||||| | || ||||||||||   |||||||||||||||  ||||| |||||||||||| ||||||||||||||| |||||    
T  10958239 atggatttgaatccttgaaggtgagtcaagtcgcaaaatcctgaattttgagatttaagtcgcgattttgacaacaatggttac 10958322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 27614594 - 27614651
Alignment:
Q  6 atattttataaatggtatatagtcataaatgact--tagtttataagaaatcataaaa 61  Q
    |||| ||||||||||||||||||||||||||| |  |||||||||||||||| |||||    
T  27614594 atatgttataaatggtatatagtcataaatgaattatagtttataagaaatcgtaaaa 27614651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7918295 - 7918343
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataa 49  Q
    ||||| ||| ||||||||| ||||||||||||||||||||| |||||||    
T  7918295 taaatttatgttataaatgatatatagtcataaatgacttaatttataa 7918343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 8545019 - 8545087
Alignment:
Q  109 ggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttga 177  Q
    |||||||| | |||||| ||||  ||||||||||||||||  |||||| ||||||| ||||||||||||    
T  8545019 ggatttaaattgttgaaagtgagtaaagtcgcaaaatcctaaattttaggatttaaatcgggattttga 8545087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 4841718 - 4841757
Alignment:
Q  46 ataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  4841718 ataagaaatcgtaaaatcgcaatcaaaatcgatgtatttt 4841757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 4841973 - 4842011
Alignment:
Q  109 ggatttaagtcgttgaaggtgaagaaagtcgcaaaatcc 147  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  4841973 ggatttgagtcgttgaaggtgaataaagtcgcaaaatcc 4842011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 12245186 - 12245109
Alignment:
Q  107 atggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||||| ||  |||| ||||| ||||||||||||| ||  |||||||||||||| ||  |||||| ||||||||    
T  12245186 atggatttaaatccatgaaagtgaataaagtcgcaaaatactgaattttaagatttaaatcatgattttaacaacaat 12245109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 3573788 - 3573828
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    ||||||||||  |||||||||||||||||||||||| ||||    
T  3573788 tataagaaattgtaaaatcgcaatcaaaatcgatgagtttt 3573828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 7359919 - 7359848
Alignment:
Q  113 ttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaatt 185  Q
    ||||||||||||||||||| |||||||| ||||| |  |||||| || |||| |||  |||||||||||||||    
T  7359919 ttaagtcgttgaaggtgaataaagtcgctaaatcttaaattttagga-ttaaatcgaaattttgacaacaatt 7359848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 30912294 - 30912334
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||||||||||||| ||||||||||| |||||||| |||||    
T  30912294 tataagaaatcatagaatcgcaatcataatcgatggatttt 30912334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 33583779 - 33583855
Alignment:
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaac 181  Q
    |||||||||| ||||||||||| | |  ||||||  |||||||| ||||||  || |||||||| ||||||||||||    
T  33583779 ctatggatttgagtcgttgaagctaattaaagtctaaaaatcctggattttgggacttaagtcgcgattttgacaac 33583855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 79
Target Start/End: Original strand, 33593057 - 33593085
Alignment:
Q  51 aaatcataaaatcgcaatcaaaatcgatg 79  Q
    |||||||||||||||||||||||||||||    
T  33593057 aaatcataaaatcgcaatcaaaatcgatg 33593085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 5e-66; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 36121006 - 36120824
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||| || |    
T  36121006 taaatatattttataaatggtatatagtcataaatgacttagtatataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttatttta-gaat 36120908  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||  ||||||| |||||| |||| ||||||||||||||    
T  36120907 tttattatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctaaattttaaaatttaaatcggaattttgacaacaat 36120824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 5361910 - 5362092
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||  ||||| ||||||| ||| |    
T  5361910 taaatatatgttaaaaatggtatataatcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaatcgatgggttttgcctatttt-ggaat 5362008  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | |||||||||||| ||||||||||| |||||||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  5362009 tctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 5362092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 8889410 - 8889228
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||| |    
T  8889410 taaatatatattataaatggtatatagtcataaacgacttggtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttggga-t 8889312  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | || |||| |||| ||||||||| |||||||||| || ||||||||| ||||||| |||||||||||||||||||||| ||||    
T  8889311 tctattatgaatttgagtcgttgatggtgaagaaattcacaaaatcctggattttaggatttaagtcgggattttgacatcaat 8889228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 9770294 - 9770112
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||| |||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||| |||  |||||||||||||||||| |    
T  9770294 taaatatatgttatgaatggtatatagtcataagtaacttagtttataagaaatcgtaaaatcgcaatcaaaattgatagattttgtctattttagga-t 9770196  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | |||||||||||| |||||||||||||||| |||||| ||||||||| |||||||  |||||||||| |||||| ||||||||    
T  9770195 tctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcctagattttagaatttaagtcgagattttaacaacaat 9770112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 9911360 - 9911541
Alignment:
Q  3 aatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttt 102  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| | ||||||||| ||     
T  9911360 aatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttagga-ttc 9911458  T
Q  103 tactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaaga-tttaagtcgggattttgacaacaat 184  Q
    ||||||||||||| | ||||||||||||||||||| |||||||| |  |||||| || ||||| ||||||||| |||||||||    
T  9911459 tactatggatttaggccgttgaaggtgaagaaagttgcaaaatcttgaattttaggattttaaatcgggatttagacaacaat 9911541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 13023752 - 13023567
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtcta-ttttaggat 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||| |||| |||| ||      
T  13023752 taaatatatgttataaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcgattgattttatctattttttggga 13023653  T
Q  100 ttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttga-ttttaagatttaagtcgggattttgacaacaat 184  Q
    || |||||||||||| |||| ||||||||||||||||||||||||||||  | ||||| ||||||||| |||||||||||||||||    
T  13023652 ttctactatggatttgagtcattgaaggtgaagaaagtcgcaaaatcctaaatttttaggatttaagttgggattttgacaacaat 13023567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 17466261 - 17466080
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||  |||||||||| |    
T  17466261 taaatatatgttataaatggtatatagtcataaatgacttagtttattagaaatcgtaaaatcgcaatctaaatcgatggattttgcttattttagga-t 17466163  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaa 183  Q
    | || ||||||||| |||| || ||| |||||||| ||||||||||||  |||||||||||||||| || |||||||||||||    
T  17466162 tctattatggatttgagtccttaaagatgaagaaaatcgcaaaatcctaaattttaagatttaagttggaattttgacaacaa 17466080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 5375846 - 5375666
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||  | |    
T  5375846 taaatatatgttataaatgatatatggtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaagtcgatgaattttgtctatttta-aaat 5375748  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaaca 182  Q
    | || |||| |||| ||||||||||||||||||||||||||||||| |  ||||||  ||||| || |||||||||||||||    
T  5375747 tctattatgaattttagtcgttgaaggtgaagaaagtcgcaaaatcttaaattttagaatttaggttgggattttgacaaca 5375666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 10143081 - 10142899
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||||| |||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||||| |||||||||||||| ||| |    
T  10143081 taaatatatattataattggtatatagtcataaatgacttgatttataagaaatcgtaaaatcacaatcaaaatcgatggattttgtctatttt-ggaat 10142983  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | ||||||||| || |||| ||||||||| |||||||||||||||  |  ||||||  ||||||||||||||||| ||||||||    
T  10142982 tatactatggacttgagtcattgaaggtggagaaagtcgcaaaatattaaattttagaatttaagtcgggattttcacaacaat 10142899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 13551598 - 13551751
Alignment:
Q  30 ataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtg 129  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| | | || || ||||||||| ||||||||||||||    
T  13551598 ataaatgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattttgtctatttt-gaaattctaatatggatttgagtcgttgaaggtg 13551696  T
Q  130 aagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    || ||||||||||||||||  |||||| ||| ||||||| |||||||||||||||    
T  13551697 aaaaaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaat 13551751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 37240439 - 37240262
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    |||||||||  ||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| || ||||||| ||  |    
T  37240439 taaatatatgatataaatggtatagagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattatgcctattttggg--t 37240342  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | |||||||||||| |||||||||||||||| ||||||| ||    ||  |||||| ||||||||| |||||||| ||||||||    
T  37240341 tctactatggatttgagtcgttgaaggtgaaaaaagtcgtaa----ctaaattttaggatttaagtagggattttaacaacaat 37240262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 8011220 - 8011346
Alignment:
Q  58 aaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaa 157  Q
    |||||||||||||||||||||||||||||   ||||| ||||| | ||||||||||| |||||||||||||||||||||||||||||||||  ||||||     
T  8011220 aaaatcgcaatcaaaatcgatgaattttgctcattttgggattct-actatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttag 8011318  T
Q  158 gatttaagtcgggattttgacaacaatt 185  Q
    ||||| ||| ||||||||||||||||||    
T  8011319 gatttgagttgggattttgacaacaatt 8011346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 23064908 - 23065092
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgactta--gtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttagga 98  Q
    ||||||||| ||||||||| ||||  |||||||||||||||  |||||||||||||| |||||| ||||| |||||||||| ||||   ||||||||| |    
T  23064908 taaatatatgttataaatgatatagggtcataaatgacttatagtttataagaaatcgtaaaattgcaattaaaatcgatggatttgacctattttagaa 23065007  T
Q  99 tttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    || | || |||||||| |||||||||| |||||||||||  |||||| || |||||||  |||||||||||| |||| ||||||||    
T  23065008 ttct-acaatggatttgagtcgttgaatgtgaagaaagttacaaaatactggattttagaatttaagtcggggttttaacaacaat 23065092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 7044806 - 7044728
Alignment:
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaa 183  Q
    |||||||||| |||||||||||||||| ||||| |||||||| | ||||||| ||||||||||||||||||||||||||    
T  7044806 ctatggatttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggattttgacaacaa 7044728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 89 - 184
Target Start/End: Complemental strand, 4156857 - 4156763
Alignment:
Q  89 tattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||||||| | ||||  ||||| ||||||| |||||||| ||||||  ||||||||  ||||||||||||||||||||||||||||||||||    
T  4156857 tattttaggattct-actacagatttgagtcgttaaaggtgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaacaat 4156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 18459735 - 18459837
Alignment:
Q  81 attttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaa 180  Q
    |||||| ||||||||||||| |  |||||||||| |||||||||| ||||| | |||||||||||| | ||||||| ||||| |||||||||||| ||||    
T  18459735 attttgcctattttaggattctg-ctatggatttgagtcgttgaaagtgaatacagtcgcaaaatcttggattttaggattttagtcgggatttttacaa 18459833  T
Q  181 caat 184  Q
    ||||    
T  18459834 caat 18459837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 6347114 - 6347189
Alignment:
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaa 180  Q
    |||||||||| ||||||||||||| || ||||| |||||||||| ||||||| ||||||||| || ||||||||||    
T  6347114 ctatggatttgagtcgttgaaggtaaataaagttgcaaaatcctggattttaggatttaagttggaattttgacaa 6347189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 24719596 - 24719517
Alignment:
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||||| |||||||||||||||| |||||||||||||| |  ||||||  | |||||||| |||||||||||||||    
T  24719596 ctatggatttgagtcgttgaaggtgaataaagtcgcaaaatcttgaattttagaaattaagtcgagattttgacaacaat 24719517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 7452488 - 7452420
Alignment:
Q  116 agtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||||||||||| ||||| ||||||| || |||||||  ||||||||||||||||| ||||||||    
T  7452488 agtcgttgaaggtgaataaagttgcaaaattctggattttagaatttaagtcgggattttcacaacaat 7452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 9149813 - 9149864
Alignment:
Q  133 aaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||| |||||    
T  9149813 aaagtcgcaaaatcctaaattttaggatttaagtcgggattttgaccacaat 9149864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 5846458 - 5846508
Alignment:
Q  134 aagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||||||||||| |||||| |||||||||||| |||||| ||||||||    
T  5846458 aagtcgcaaaatcctggattttgagatttaagtcgtgattttaacaacaat 5846508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 24719816 - 24719776
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  24719816 tataagaaatcgtaaaatcgcaatcaaaatcgatgagtttt 24719776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 7815659 - 7815561
Alignment:
Q  81 attttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaa 180  Q
    |||||| ||||||| ||||| | ||||||| ||| ||||| | ||| |||| |||||| |||||| ||  |||||| |||||||||||||||||| ||||    
T  7815659 attttgcctattttgggattct-actatgggtttgagtcgcttaagctgaataaagtcacaaaatgctgtattttaggatttaagtcgggattttaacaa 7815561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 4157090 - 4157053
Alignment:
Q  48 aagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  4157090 aagaaatcgtaaaatcgcaatcaaaatcgatggatttt 4157053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 46664421 - 46664486
Alignment:
Q  119 cgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||| |||| ||||||||||||| ||  |||||||||||||||| |  ||||||||| ||||    
T  46664421 cgttgaagatgaacaaagtcgcaaaattctgaattttaagatttaagttgaaattttgacagcaat 46664486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 8011024 - 8011064
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    ||||||||||  ||||||||||||||||||||||| |||||    
T  8011024 tataagaaattgtaaaatcgcaatcaaaatcgatgtatttt 8011064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 85
Target Start/End: Complemental strand, 8889455 - 8889427
Alignment:
Q  57 taaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||||||||||||||||||||||||||||    
T  8889455 taaaatcgcaatcaaaatcgatgaatttt 8889427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 85
Target Start/End: Complemental strand, 9770341 - 9770313
Alignment:
Q  57 taaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||||||||||||||||||||||||||||    
T  9770341 taaaatcgcaatcaaaatcgatgaatttt 9770313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 18327411 - 18327343
Alignment:
Q  116 agtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||||||| | |  ||||||||||||||||  ||||| ||| |||| ||| |||||||||||||||    
T  18327411 agtcgttgaagctaagtaaagtcgcaaaatcctaaattttgagacttaattcgtgattttgacaacaat 18327343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 18437986 - 18438054
Alignment:
Q  116 agtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||||||| | |  ||||||||||||||||  ||||| ||| |||| ||| |||||||||||||||    
T  18437986 agtcgttgaagctaagtaaagtcgcaaaatcctaaattttgagacttaattcgtgattttgacaacaat 18438054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 5922231 - 5922049
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||| ||||||||||||||||||||||| || |||||||||||||  |||||||||||||||||||||| |||||||||||||| ||| |    
T  5922231 taaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcgcaaaatcgcaatcaaaatcgatggattttgtctattttggga-t 5922133  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | |||||||||| ||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||    
T  5922132 tctactatggatataagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 5922049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 11879782 - 11879600
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||| |    
T  11879782 taaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttagga-t 11879684  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | |||||| ||||| |||||||||| ||||||||||| ||||||||||  |||||| |||||||||| | ||||||||||||||    
T  11879683 tctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaat 11879600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 11897198 - 11897016
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||| |    
T  11897198 taaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttagga-t 11897100  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | |||||| ||||| |||||||||| ||||||||||| ||||||||||  |||||| |||||||||| | ||||||||||||||    
T  11897099 tctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaat 11897016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 19704402 - 19704583
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||| ||||||||||||||||||||| |||| |||||||||||||| |||||| |||||||||||||||| |||||| ||||| | ||| |    
T  19704402 taaatatatgttacaaatggtatatagtcataaataacttggtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctattat-ggaat 19704500  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttg-attttaagatttaagtcgggattttgacaaca 182  Q
    | |||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||    
T  19704501 tctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaaaccttgaattttaagatttaagttgggattttgacaaca 19704583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 29384264 - 29384444
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||||||||||||||||||||| ||  ||||||||||||| ||||||||||||| |||||||||||||||| ||||||| ||| |    
T  29384264 taaatatatgttataaatggtatatagtcataaatgaattgttttataagaaatcgtaaaatcgcaatc-aaatcgatgaattttgcctatttttgga-t 29384361  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaa 183  Q
    | |||||||||||| |||||||||||||||||||||||||||||||   ||||||| |||||||  | |||||||||||||||    
T  29384362 tatactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatctaagattttaggatttaaacctggattttgacaacaa 29384444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 15294852 - 15294672
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||| ||  |    
T  15294852 taaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaaatcgatggattttgcctatttt-ggtat 15294754  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaaca 182  Q
    | |||||| ||||| |||||||||||||||| ||||||||||||||||  |||||| |||||||||||||||||| ||||||    
T  15294753 tctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaaca 15294672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 15475221 - 15475041
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||| ||  |    
T  15475221 taaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaaatcgatggattttgcctatttt-ggtat 15475123  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaaca 182  Q
    | |||||| ||||| |||||||||||||||| ||||||||||||||||  |||||| |||||||||||||||||| ||||||    
T  15475122 tctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaaca 15475041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 45403211 - 45403028
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||| ||||| |||| ||||||||||||||||||||||| ||||||  ||||||  ||||    
T  45403211 taaatatatgttataaatggtatattatcataaatgacttggttgataaggaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgagatt 45403112  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaatt 185  Q
     || |||||||||||||||||||||||| ||||||||||||||||| | |||||||  |||||||||| ||||||||||||||||    
T  45403111 ctt-ctatggatttaagtcgttgaaggtcaagaaagtcgcaaaatcttggattttagaatttaagtcgcgattttgacaacaatt 45403028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 31424345 - 31424167
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| |||||| ||||||| |||||    
T  31424345 taaatatatgttataattggtatatagtcataaacgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttgggatt 31424246  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaa 180  Q
     || |||||||||| |||||||||| | ||||||||||| ||||||||  ||||||  ||||||||| ||||||||||||    
T  31424245 ctt-ctatggatttgagtcgttgaaagggaagaaagtcgtaaaatcctgaattttagaatttaagtcaggattttgacaa 31424167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 3094190 - 3094378
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttata----------agaaatcataaaatcgcaatcaaaatcgatgaattttgtcta 90  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||          | ||||| ||||||||||||||||||||||| |||||| |||    
T  3094190 taaatatatgttataaatggtatatagtcataaatgacttagtttatataaaaaaaaaaaaaatcgtaaaatcgcaatcaaaatcgatggattttgccta 3094289  T
Q  91 ttttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaa 180  Q
    |||||||||| | ||||||||||| |||||||||||||||||||||| ||||||||||  ||||||||||||||||||  ||||||||||    
T  3094290 ttttaggattct-actatggatttgagtcgttgaaggtgaagaaagtagcaaaatcctgaattttaagatttaagtcgaaattttgacaa 3094378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 23142357 - 23142224
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |    
T  23142357 taaatatatgttataaatggtatatagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttagga-t 23142259  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaa 135  Q
    | |||||||||||| ||||||||||| ||||||||    
T  23142258 tctactatggatttcagtcgttgaagttgaagaaa 23142224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 22910153 - 22910319
Alignment:
Q  5 tatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggattttta 104  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| ||| |||||| |||||||| || || ||    
T  22910153 tatatgttataaatggtatatagtcataaattacttaatttataagaaatcttaaaatcgcaatcaaaatcaatggattttgcctattttaaga-ttcta 22910251  T
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggat 172  Q
    |||| ||||| |||||||||| ||||||||||||| ||||||||  |||||| |||||||||||||||    
T  22910252 ctatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagtcgggat 22910319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 7489230 - 7489409
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctatttta---gg 97  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||    |    
T  7489230 taaatatatgttataaatgatatatagtcataaatgacttaatttataagaaatcataaaattgcaatcaaaatcgataaattttgtctattttatttag 7489329  T
Q  98 atttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaa 180  Q
    | || ||||| |||||| ||||||||||||||||||||   ||||||| ||  |||||| ||||||| | |||||||||||||    
T  7489330 aattctactacggattttagtcgttgaaggtgaagaaa---gcaaaattctgtattttacgatttaattggggattttgacaa 7489409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 17647177 - 17646993
Alignment:
Q  1 taaatatattttataaatggtatatagt--cataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttagga 98  Q
    ||||||||||||| |||||||||||| |   | ||||||||  |||||||||||||| | ||||  |||||||||||||||||||||  ||||||| |||    
T  17647177 taaatatattttacaaatggtatataataaaaaaaatgactaggtttataagaaatcgttaaataacaatcaaaatcgatgaatttttcctattttggga 17647078  T
Q  99 tttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
     || ||||||| |||| |||||||||||||||||||||||||||||||||  |||||| |||||||||||| ||||||||||||||    
T  17647077 -ttctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaat 17646993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 6811003 - 6810861
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||| |||||| |||||||| |||||||||||||| |||||| ||||||||  | |    
T  6811003 taaatatatgttataaatgatatatagttataaatgacttagtttatatgaaatcgtaaaatcgtaatcaaaatcgatg-attttgcctatttta-aaat 6810906  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaat 145  Q
    | |||||||||||| ||||||||||||||||||||||||||||||    
T  6810905 tctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 6810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 27836411 - 27836593
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||  |||||| | ||||||||| |||||||||||  ||||||| || |    
T  27836411 taaatacatgttataaatggtatatagtcataaatgacttagtttataagaaattgtaaaattgtaatcaaaattgatgaattttgcttatttta-gaat 27836509  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | |||||||||||| ||| |||||||||||| |||  |||||||||||  |||||| ||| |||||  | ||||||||||||||    
T  27836510 tctactatggatttcagttgttgaaggtgaataaaaccgcaaaatcctgaattttaggatctaagtttgaattttgacaacaat 27836593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 6292289 - 6292467
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||  ||| | |||||||||||||| ||||||||   ||||||| || |    
T  6292289 taaatatattttataaatggtatatagtgataaatgacttagattataataaattgtaagaccgcaatcaaaatcgttgaatttttcttatttta-gaat 6292387  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaa 180  Q
    | |||||||| ||| ||||||| ||| |||| |||||| ||||||| |  ||||||||||||||||||| ||||| ||||    
T  6292388 tatactatgggtttgagtcgttaaagatgaaaaaagtcacaaaatcttaaattttaagatttaagtcggtattttaacaa 6292467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 32424511 - 32424415
Alignment:
Q  4 atatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| || |||||||||||||||||||||    
T  32424511 atatatgttataaatggtatatagtcataaatgacttagtatataataaatcgtaaaatcgcaatcaaaatctataaattttgtctattttaggatt 32424415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 9212202 - 9212296
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctatttta 95  Q
    ||||||||  ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||    
T  9212202 taaatataggttataaatggtatatggtcataaatgatttagtttataagaaatcttaaaatcgcaatcaaaatcgatggatttttcctatttta 9212296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 477101 - 477176
Alignment:
Q  109 ggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||||||| |||||||||| ||||||||||||||||    
T  477101 ggatttaagtcattgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaacaat 477176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 24056595 - 24056697
Alignment:
Q  81 attttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaa 180  Q
    |||||||||||||| ||||||   |||||||||| ||||||| || ||||| |||||||||||||||| ||||||| ||||||||||  |||||||| ||    
T  24056595 attttgtctattttgggatttcg-ctatggatttgagtcgttaaatgtgaataaagtcgcaaaatcctggattttaggatttaagtcaagattttgataa 24056693  T
Q  181 caat 184  Q
    ||||    
T  24056694 caat 24056697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 15761464 - 15761568
Alignment:
Q  79 gaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgac 178  Q
    |||||||| ||||||| |||||||  ||||| |||| ||||||||||||| || ||| || ||||||||| || |||| ||||||||||| |||||||||    
T  15761464 gaattttgcctattttgggattttg-ctatgaatttgagtcgttgaaggtaaataaactcacaaaatcctggagtttaggatttaagtcgagattttgac 15761562  T
Q  179 aacaat 184  Q
    ||||||    
T  15761563 aacaat 15761568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 17788372 - 17788435
Alignment:
Q  121 ttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||||||  |||||| ||||||||| |||||||| |||||||| | |||||||||||||||    
T  17788372 ttgaaggtgagtaaagtctcaaaatcctagattttaaaatttaagttgcgattttgacaacaat 17788435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 15231850 - 15231733
Alignment:
Q  57 taaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgatttta 156  Q
    ||||||||||||||||   | || |||||| |||||||| |||||| | |||| |||| |||||||||||||||||||  |||||||||| |  | ||||    
T  15231850 taaaatcgcaatcaaatatgttggattttgcctattttaagatttt-agtatgaatttcagtcgttgaaggtgaagaacatcgcaaaatcttaaagttta 15231752  T
Q  157 agatttaagtcgggatttt 175  Q
     ||||||| ||| ||||||    
T  15231751 ggatttaaatcgagatttt 15231733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 29384200 - 29384240
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  29384200 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 29384240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 23136396 - 23136353
Alignment:
Q  137 tcgcaaaatccttgattttaagatttaagtcgggattttgacaa 180  Q
    ||||||||||||  |||||| |||||||||||||||||||||||    
T  23136396 tcgcaaaatcctgaattttaggatttaagtcgggattttgacaa 23136353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 85
Target Start/End: Original strand, 7489183 - 7489211
Alignment:
Q  57 taaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||||||||||||||||||||||||||||    
T  7489183 taaaatcgcaatcaaaatcgatgaatttt 7489211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 8582284 - 8582244
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    ||||||||||| ||||||  |||||||||||||||||||||    
T  8582284 tataagaaatcgtaaaattacaatcaaaatcgatgaatttt 8582244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 17647238 - 17647198
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    ||||||||||  ||||||||||||||||||||||| |||||    
T  17647238 tataagaaattgtaaaatcgcaatcaaaatcgatggatttt 17647198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 1e-63; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 13276213 - 13276395
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||  |||||| ||||||||||| |    
T  13276213 taaatatatgttataaatgatatatagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgattgattttgcctattttagga-t 13276311  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | ||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||    
T  13276312 tctactatggatttaggtcgttgaagatgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaat 13276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 23528838 - 23528655
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||  |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||  |||||| ||||||||||| |    
T  23528838 taaatatacgttataaatggtatatagtcataaatgacttcgtttataagaaatcgtaaaatcgcattcaaaatcgatagattttgcctattttagga-t 23528740  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaatt 185  Q
    | |||||||||||| ||||||||||| |||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||    
T  23528739 tctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaagatttaagttgggattttgacaacaatt 23528655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 9352010 - 9352192
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||      
T  9352010 taaatatatgttataaatggtatatagtcaaaaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgacggattttgtctattttggga-c 9352108  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | | |||| ||||| |||| |||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  9352109 tctgctatagatttgagtctttgaaggtgaagaaagtcgcaaaaccctggattttaggatttaagtcgggattttgacaacaat 9352192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 9954984 - 9955164
Alignment:
Q  3 aatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttt 102  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||  |||||| ||| ||     
T  9954984 aatatatgttataaatggtatatagtcataaatgacctagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttggga-ttc 9955082  T
Q  103 tactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||  |||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||||||||    
T  9955083 tacattggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaat 9955164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 6 - 182
Target Start/End: Complemental strand, 12513458 - 12513283
Alignment:
Q  6 atattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttac 105  Q
    |||| ||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||  ||||||| || ||||||    
T  12513458 atatgttatatatggtatatagtcgtaaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgattattttatga-ttttac 12513360  T
Q  106 tatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaaca 182  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| |||| || |||||||||||||||||||||||||    
T  12513359 tatggatttgagtcgttgaagctgaagaaagtcgcaaaatcctagattgtaggatttaagtcgggattttgacaaca 12513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 19009898 - 19010073
Alignment:
Q  6 atattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttac 105  Q
    |||| |||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||  ||||||| || ||||||    
T  19009898 atatgttataaatggtatatagttataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttatttta-gaattttac 19009996  T
Q  106 tatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaaca 182  Q
    |||||||||||||| ||||||||||| ||||||||||||||||  |||||| |||||||||| ||||||||||||||    
T  19009997 tatggatttaagtcattgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtccggattttgacaaca 19010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 9327160 - 9327344
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaa--tgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttagga 98  Q
    ||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||    
T  9327160 taaatatatattataaatggtatatagtcaaaaaaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttggga 9327259  T
Q  99 tttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
     ||||||||| ||||| |||||||||||||| |||||||||||||| |||  |||||| |||||||||| ||||||| ||||||||    
T  9327260 -ttttactatagatttgagtcgttgaaggtgtagaaagtcgcaaaaccctaaattttaggatttaagtcaggattttaacaacaat 9327344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 13100373 - 13100186
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||| |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||  ||||| ||||||||||| |    
T  13100373 taaatatatgttacaaatggtatatagtcataaatgacttggtttataagaaattgtaaaatcgcaatcaaaatcgatggtttttgcctattttagga-t 13100275  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaattgtta 189  Q
    | |||||||||||| |||||||||| ||||||||||||| |||||||| |||||||  |||||||| ||||||||||||| ||| ||||    
T  13100274 tctactatggatttgagtcgttgaacgtgaagaaagtcgtaaaatcctcgattttagaatttaagttgggattttgacaataatggtta 13100186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 16125402 - 16125580
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||| ||| |||||| |||||||| || |    
T  16125402 taaatatatgttataaatggtatatattcataaatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttaaga-t 16125500  T
Q  101 tttactatggatttaagtcgttgaaggtg---aagaaagtcgcaaaatccttgattttaagatttaagtcgggattttga 177  Q
    ||||||||||||||| |||||||||||||   |||||||||||||||||||  |||||| |||||||||| |||||||||    
T  16125501 tttactatggatttaggtcgttgaaggtgaaaaagaaagtcgcaaaatcctgaattttaggatttaagtcaggattttga 16125580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 42180015 - 42180193
Alignment:
Q  4 atatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggattttt 103  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||| |||||| ||||||| | | || |    
T  42180015 atatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtagaatcacaatcaaaatcgatgtattttgcctatttt-gaaattct 42180113  T
Q  104 actatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaa 183  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||  ||||||  |||||||| ||||||||||||||||    
T  42180114 actatggatttgactcgttgaaggggaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttgacaacaa 42180193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 18304758 - 18304940
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||  |||| ||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||| |||| ||||||||||||||  ||||    
T  18304758 taaatatacgttatgaatggtatatagtcataaatgacttagcttataagaaatcgtaaa-tcgcaatcaaaattgatggattttgtctattttgagatt 18304856  T
Q  101 tttactatggatttaagtcgtt-gaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
     | |||||| |||| ||||||| ||||||||||||||||||||||| || ||||||| ||||||||| |||||||||||||||||    
T  18304857 ct-actatgaatttgagtcgtttgaaggtgaagaaagtcgcaaaatactggattttaggatttaagttgggattttgacaacaat 18304940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 9128787 - 9128969
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    |||| |||| |||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| || |    
T  9128787 taaagatatgttataaatggtatatagtcaaaaataacttagtttataagaaatcgtcaaatcgcaatcaaaatcgatgaattttgtctattttaaga-t 9128885  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | ||||||  |||| ||||||| || |||||||||||||||| |||||   ||||| ||||||||||| |||||| ||||||||    
T  9128886 tctactataaatttgagtcgttaaatgtgaagaaagtcgcaagatcctaatttttaggatttaagtcgtgattttaacaacaat 9128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 25146716 - 25146897
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||  |||||||| |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||| |||| | |||||||||||| |||||    
T  25146716 taaatatacgttataaattgtatatagtcataaataacttagtttataagaaatcgtaaa-tcgcaattaaaattgatgtactttgtctattttgggatt 25146814  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
     | |||||| |||| |||||||||||||||||||||||||||||| ||  |||||| |||||||||| ||||||||||||||||    
T  25146815 ct-actatgaatttgagtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcaggattttgacaacaat 25146897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 17869697 - 17869878
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| || ||||| |||||| || ||||| ||||||||||| |||||||| |||||| |||||||||||||| |||||||| ||||||||||| |    
T  17869697 taaatatatgttgtaaatagtatatggttataaaagacttagtttaaaagaaatcgtaaaattgcaatcaaaatcgaagaattttgcctattttagga-t 17869795  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaattgtt 188  Q
    | |||| |||||||| ||||| |||||||||||||||||||||||||     ||||||||||||||| ||||||||||||||| ||||    
T  17869796 tctactgtggatttaggtcgtcgaaggtgaagaaagtcgcaaaatcc-----tttaagatttaagtcaggattttgacaacaagtgtt 17869878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 21846221 - 21846397
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||  |||||||| |||||||||   |||||| | ||||   |||||||||||||||||||||| ||||| ||||||||  ||||    
T  21846221 taaatatatgttataaattatatatagttataaatgac---gtttatgaaaaat---aaaatcgcaatcaaaatcgatggattttttctattttgagatt 21846314  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
     | ||||||||||| |||||||||||||||| |||||||||||||||| ||||||| ||||||| |||||||||||||||||||    
T  21846315 ct-actatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctggattttaggatttaactcgggattttgacaacaat 21846397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 45 - 184
Target Start/End: Original strand, 41032661 - 41032799
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaa 144  Q
    ||||||||||  |||||||||||| |||||||||| |||||| ||||||||| ||| | ||||||||||| |||||||||||||||||||| ||||||||    
T  41032661 tataagaaattgtaaaatcgcaattaaaatcgatggattttgcctattttagaattct-actatggatttgagtcgttgaaggtgaagaaaatcgcaaaa 41032759  T
Q  145 tccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||  ||| || ||||||||||| |||||||||||||||    
T  41032760 tcctgaattctacgatttaagtcgagattttgacaacaat 41032799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 32881509 - 32881415
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctatttta 95  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  32881509 taaatatatgttataaatggtatatagtcatgaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttta 32881415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 47786041 - 47785958
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattt 84  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||| ||||    
T  47786041 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaattgcaatcaaaaccgatggattt 47785958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 18228380 - 18228284
Alignment:
Q  3 aatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| |||| |||||| ||||||| |||||    
T  18228380 aatatatgttataaatggtatatagtcataaataacttaatttataagaaatcataaaatc-caatcaaaattgatggattttgcctattttgggatt 18228284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 30619150 - 30619075
Alignment:
Q  109 ggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||    
T  30619150 ggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaacaat 30619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 184
Target Start/End: Original strand, 17055995 - 17056128
Alignment:
Q  50 gaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctt 149  Q
    |||||| ||||||||||||||||||||||| |||||   |||||||  ||| | ||||||||| | |||||||||||||| ||||| | ||||||||||     
T  17055995 gaaatcgtaaaatcgcaatcaaaatcgatggattttacttattttaaaattct-actatggatctgagtcgttgaaggtggagaaaattgcaaaatcctg 17056093  T
Q  150 gattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||| ||||||| || |||||||||| |||||    
T  17056094 gattttaggatttaaatcaggattttgactacaat 17056128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 103 - 185
Target Start/End: Original strand, 14074418 - 14074500
Alignment:
Q  103 tactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaatt 185  Q
    |||| ||||||| ||||||||||  |||||||||||||||||||||  |||||| |||||||| |||||||||||||||||||    
T  14074418 tactctggatttgagtcgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagacgggattttgacaacaatt 14074500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 100 - 184
Target Start/End: Original strand, 12800626 - 12800710
Alignment:
Q  100 ttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||||| ||||| |||||||||| ||||||||||||| ||||||||  |||||| ||||||||| |||||||| ||||||||    
T  12800626 ttttactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagttgggattttcacaacaat 12800710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 18337572 - 18337650
Alignment:
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||| || | |||||||||||||||||||||||    
T  18337572 ctatggatttgagtcgttgaaggtgaataaagttgcaaaatcctggatttt-aggtataagtcgggattttgacaacaat 18337650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 34478833 - 34478899
Alignment:
Q  118 tcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||||||||    
T  34478833 tcgttgaaggtgaagaaagtcacaaaatcccaaattttaagatttaagtcgggattttaacaacaat 34478899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 27917517 - 27917578
Alignment:
Q  120 gttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaac 181  Q
    ||||||||| || ||| |||||||||||| ||||| |  |||||||||||||||||||||||    
T  27917517 gttgaaggtaaataaaatcgcaaaatcctagatttcagaatttaagtcgggattttgacaac 27917578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 13100431 - 13100391
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  13100431 tataagaaatcttaaaatcgcaatcaaaatcgatggatttt 13100391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 18228505 - 18228468
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaat 82  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  18228505 tataagaaatcgtaaaatcgcaatcaacatcgatgaat 18228468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 8772783 - 8772715
Alignment:
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggatt 173  Q
    |||||||||| ||| ||||||| |  | ||||||||||||| || ||||||  ||||||||||||||||    
T  8772783 ctatggatttgagttgttgaagctacacaaagtcgcaaaattctggattttgggatttaagtcgggatt 8772715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 85
Target Start/End: Original strand, 9327114 - 9327142
Alignment:
Q  57 taaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||||||||||||||||||||||||||||    
T  9327114 taaaatcgcaatcaaaatcgatgaatttt 9327142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12002819 - 12002859
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgactta 41  Q
    ||||||||| |||||||| | ||||||||||||||||||||    
T  12002819 taaatatatgttataaattgcatatagtcataaatgactta 12002859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 85
Target Start/End: Original strand, 17869650 - 17869678
Alignment:
Q  57 taaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||||||||||||||||||||||||||||    
T  17869650 taaaatcgcaatcaaaatcgatgaatttt 17869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 21846162 - 21846202
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    ||||||||||  |||||||||||||||||| ||||||||||    
T  21846162 tataagaaattgtaaaatcgcaatcaaaatagatgaatttt 21846202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 27917319 - 27917363
Alignment:
Q  2 aaatatattttataaatggtatatagtcataaatgacttagttta 46  Q
    |||||||| |||||||| |||||||||||||||| ||| ||||||    
T  27917319 aaatatatattataaatcgtatatagtcataaataactcagttta 27917363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 39845162 - 39845194
Alignment:
Q  51 aaatcataaaatcgcaatcaaaatcgatgaatt 83  Q
    |||||||||||||||||| ||||||||||||||    
T  39845162 aaatcataaaatcgcaattaaaatcgatgaatt 39845194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 2e-62; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 31237926 - 31238106
Alignment:
Q  3 aatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttt 102  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||  |||||||| || ||     
T  31237926 aatatatgttataaatggtatataatcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttttcctattttaaga-ttc 31238024  T
Q  103 tactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||| |||| |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  31238025 tactatgaatttgagtcgttgaaggtgaagaaagtggcaaaatcctagattttaggatttaagtcgggattttgacaacaat 31238106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 1404961 - 1404783
Alignment:
Q  5 tatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggattttta 104  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||||||  || ||||||| || ||    
T  1404961 tatatgttataaatggtgtatagtcataaatgacttagtatataagaaatcgtaaaatcacaatcaaaatcgatggattttgcatagtttagga-ttcta 1404863  T
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | |||||||||||||||||||||||||||||||| |||||||||  ||||||  ||||||||||||||||||||||||||    
T  1404862 caatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctaaattttagaatttaagtcgggattttgacaacaat 1404783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 30432591 - 30432419
Alignment:
Q  11 ttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatgg 110  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||  || || ||||||||    
T  30432591 ttataaatggtatatagtaataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctattttgaga-ttctactatgg 30432493  T
Q  111 atttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||| |||||||||||| ||||||||||| |||||||| |||||||  |||||| || ||||||||||||||||    
T  30432492 atttgagtcgttgaaggcgaagaaagtcgaaaaatcctagattttagaatttaaatcaggattttgacaacaat 30432419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 31578186 - 31578007
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||| ||||||  |||||||||| |    
T  31578186 taaatatatgttataaatggtatatagtcataaatgacttagtttataataaatcgtaaaattgcaatcaaaattgatggattttgcttattttagga-t 31578088  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaaca 182  Q
    | ||||| |||||||| |||||||||||||||||| |||||||||| |  ||||||| ||||||||||||||||||||||||    
T  31578087 tctacta-ggatttaaatcgttgaaggtgaagaaaatcgcaaaatcttaaattttaacatttaagtcgggattttgacaaca 31578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 36430030 - 36429848
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||| |||||| |||||||  || |    
T  36430030 taaatatatgttagaaatgatatatagtcataaattacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttgaga-t 36429932  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | | ||||| | || ||||||||||||||||||||||||||||||||| |||| || ||||||||| |||||||||||||||||    
T  36429931 tctcctatgaacttgagtcgttgaaggtgaagaaagtcgcaaaatcctagattataggatttaagttgggattttgacaacaat 36429848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 35565901 - 35566082
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| |||||  |||||||||||||||| |||||| ||||||| ||| |    
T  35565901 taaatatatgttataaattgtatatagtcataaatgactttgtttataagaaatcgtaaaactgcaatcaaaatcgatggattttgcctattttggga-t 35565999  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaa 183  Q
    | ||| |||||||| |||| |||||  |||||||||||||||||||||  |||||  ||||||||| ||||||||||||||||    
T  35566000 tctaccatggatttgagtcattgaatatgaagaaagtcgcaaaatcctgaattttgtgatttaagttgggattttgacaacaa 35566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 20063884 - 20063714
Alignment:
Q  13 ataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggat 112  Q
    |||||||||||| |||||||||||| |||||| |||||||| | |||||||||||| ||||||||||||||||| ||||||| ||| || ||||||||||    
T  20063884 ataaatggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttggga-ttctactatggat 20063786  T
Q  113 ttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||| |||||| ||||||||  ||||||| | | ||||||| | |||||||||||||||||||||||||    
T  20063785 ttaagtccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaat 20063714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 15588809 - 15588978
Alignment:
Q  13 ataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggat 112  Q
    |||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| |||| ||||  ||||||||||||||  || || ||||||| ||    
T  15588809 ataaatggtatataatcataaatgacttagtttatatgaaatcgtaaaatcgcaataaaaaacgattgattttgtctattttgaga-ttctactatgtat 15588907  T
Q  113 ttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    || ||| ||||||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||| ||||    
T  15588908 ttgagttgttgaaggtgaagaaagacgcaaaatcctgaattttaaga-ttaagtcgggattttgacagcaat 15588978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 57 - 184
Target Start/End: Original strand, 23863324 - 23863450
Alignment:
Q  57 taaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgatttta 156  Q
    ||||||||||| ||||||||||| |||||| |||||||  |||| | ||||||||||| |||||||||| ||||||||||||||||||| || |||||||    
T  23863324 taaaatcgcaaccaaaatcgatggattttgcctattttgagattct-actatggatttcagtcgttgaaagtgaagaaagtcgcaaaattctcgatttta 23863422  T
Q  157 agatttaagtcgggattttgacaacaat 184  Q
      ||||||||||||||||||||||||||    
T  23863423 gaatttaagtcgggattttgacaacaat 23863450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 1690675 - 1690775
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||  ||| | ||||||| |||||    
T  1690675 taaatatattttataaatggtatatagtcataaaagacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgggtttcgcctattttgggatt 1690774  T
Q  101 t 101  Q
    |    
T  1690775 t 1690775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 19491983 - 19491854
Alignment:
Q  56 ataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattt- 154  Q
    |||||||||||||||||||||||| |||||  ||||||| ||||| |  |||||||||| ||||||| ||| ||||||||||||||||||||| |||||     
T  19491983 ataaaatcgcaatcaaaatcgatggattttacctatttt-ggattctg-ctatggatttgagtcgtttaagatgaagaaagtcgcaaaatcctagatttt 19491886  T
Q  155 -taagatttaagtcgggattttgacaacaatt 185  Q
     || ||||||| ||| ||||||||||||||||    
T  19491885 ataggatttaattcgagattttgacaacaatt 19491854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 1690790 - 1690891
Alignment:
Q  82 ttttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaac 181  Q
    ||||| ||||||| ||||||| ||||||||| | |||||| |||||||||||||||| |||||||||  |||||||||||||||||||  ||||||||||    
T  1690790 ttttgcctattttgggatttt-actatggatctgagtcgtcgaaggtgaagaaagtcacaaaatcctaaattttaagatttaagtcggagttttgacaac 1690888  T
Q  182 aat 184  Q
    |||    
T  1690889 aat 1690891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 182
Target Start/End: Original strand, 25539222 - 25539353
Alignment:
Q  50 gaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctt 149  Q
    |||||| | |||||||| |||||||||||| ||||||  |||||| ||||| |  ||||||||||||||||||||||||||||||| | ||||| || |     
T  25539222 gaaatcgttaaatcgcagtcaaaatcgatggattttgcttattttcggattctc-ctatggatttaagtcgttgaaggtgaagaaaattgcaaattcttg 25539320  T
Q  150 gattttaagatttaagtcgggattttgacaaca 182  Q
     |||||| ||||||| |||||||||| ||||||    
T  25539321 aattttaggatttaaatcgggattttaacaaca 25539353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 16766789 - 16766710
Alignment:
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||||| | |||||||||||||| ||| ||| ||||||||  |||||||||||||||||   ||||||||||||||    
T  16766789 ctatggatttgattcgttgaaggtgaataaaatcgtaaaatcctaaattttaagatttaagtcaaaattttgacaacaat 16766710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 31023326 - 31023259
Alignment:
Q  80 aattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatcct 148  Q
    ||||||| ||||||||||||| | |||||| |||| |||||||||| ||||| ||||||||||||||||    
T  31023326 aattttgcctattttaggattct-actatgaatttgagtcgttgaaagtgaataaagtcgcaaaatcct 31023259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 19245204 - 19245153
Alignment:
Q  133 aaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||| ||||||||  ||||||| ||||||||||||||||||||||||||    
T  19245204 aaagtcgtaaaatcctgaattttaaaatttaagtcgggattttgacaacaat 19245153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 13502561 - 13502601
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  13502561 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 13502601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 15588742 - 15588782
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  15588742 tataagaaattataaaatcgcaatcaaaatcgatggatttt 15588782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 34841635 - 34841583
Alignment:
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaa 157  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||  |||||||    
T  34841635 ctatggatttgagtcgttgaaggtgaataaagtcgcagaatcctaaattttaa 34841583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 35565845 - 35565885
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  35565845 tataagaaatcataaaatcacaatcaaaatcgatggatttt 35565885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 5395698 - 5395777
Alignment:
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||||| |||| || ||| |||| ||||||||||||||||  |||||| |||||| |||   ||||||||||||||    
T  5395698 ctatggatttgagtcatttaagatgaataaagtcgcaaaatcctatattttatgatttaggtcaaaattttgacaacaat 5395777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 15516624 - 15516687
Alignment:
Q  120 gttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaa 183  Q
    |||||||||||| ||||||||||||| ||  || ||||||||||||| | |||||| |||||||    
T  15516624 gttgaaggtgaataaagtcgcaaaatgctgaatattaagatttaagttgcgattttaacaacaa 15516687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 27407032 - 27406993
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaattt 84  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  27407032 tataagaaatcataaaatcgcaatcaaaattgatggattt 27406993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 174
Target Start/End: Original strand, 13503069 - 13503162
Alignment:
Q  81 attttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttga-ttttaagatttaagtcgggattt 174  Q
    |||||| ||||||||| |||||   ||||||||| || ||||||| ||||| ||  |||||||||||| || ||||||||||||||||| |||||    
T  13503069 attttgcctattttagaattttgt-tatggatttgagccgttgaaagtgaataagatcgcaaaatcctagatttttaagatttaagtcgagattt 13503162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 34577780 - 34577702
Alignment:
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaa 183  Q
    |||||||||| ||||||||| | |  | |||||||||||| ||  |||||||||| |||||||||| |||||| |||||    
T  34577780 ctatggatttgagtcgttgatgctacacaaagtcgcaaaaaccaggattttaagacttaagtcgggtttttgataacaa 34577702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25539093 - 25539138
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagttta 46  Q
    ||||||||| ||||| || |||||||||||||||||||| ||||||    
T  25539093 taaatatatgttatatattgtatatagtcataaatgactcagttta 25539138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34841762 - 34841717
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagttta 46  Q
    ||||||||| |||||||| |||||||||||||||| ||| ||||||    
T  34841762 taaatatatgttataaattgtatatagtcataaataactcagttta 34841717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 974507 - 974467
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgactta 41  Q
    ||||||||| |||||||| | ||||||||||||||||||||    
T  974507 taaatatatgttataaattgcatatagtcataaatgactta 974467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 1690616 - 1690656
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||||||| || |||||||||||||||||||||| ||||||    
T  1690616 tataagaattcgtaaaatcgcaatcaaaatcgataaatttt 1690656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 29660937 - 29660893
Alignment:
Q  140 caaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||||| ||||||| ||||||||||||  |||||||||||||    
T  29660937 caaaatcctagattttaggatttaagtcggatttttgacaacaat 29660893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 3e-61; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 4247538 - 4247352
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |    
T  4247538 taaatatatgttacaaatgatatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgcctattttggga-t 4247440  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaattgtt 188  Q
    | |||||||||||||||| |||||| |||||||||||  |||||||||  |||||| ||||||| | |||||||||||||||||||||    
T  4247439 tctactatggatttaagttgttgaaagtgaagaaagttacaaaatcctgaattttaggatttaaattgggattttgacaacaattgtt 4247352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 5058711 - 5058530
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  | |||||| |||||||| || |    
T  5058711 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgtaggattttgcctattttaaga-t 5058613  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaa 183  Q
    | ||||||||||||| ||||||||||||||||||| ||||||||| ||  |||||| ||||||||||||||||||||||||||    
T  5058612 tctactatggatttaggtcgttgaaggtgaagaaaatcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 5058530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 44944792 - 44944978
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||| |||||| ||||||||||| |    
T  44944792 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatagtaaaatcccaatcaaaatcgatggattttgactattttagga-t 44944890  T
Q  101 tttactatggatttaagtcgttgaag----gtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | |||||||||||| | |||||||||    ||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  44944891 tctactatggatttgaatcgttgaaggtgagtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 44944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 14055433 - 14055251
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||| |||||| |||||||| || |    
T  14055433 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggattttgcctatttta-gaat 14055335  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | |||||| ||||| ||||||||||||||||||||||||||||||| | ||||||| ||| ||||| |||||||| ||||||||    
T  14055334 tctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaat 14055251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 14365461 - 14365279
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||| |||||| |||||||| || |    
T  14365461 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggattttgcctatttta-gaat 14365363  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | |||||| ||||| ||||||||||||||||||||||||||||||| | ||||||| ||| ||||| |||||||| ||||||||    
T  14365362 tctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaat 14365279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 5715469 - 5715290
Alignment:
Q  3 aatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttt 102  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  |||||| ||| ||     
T  5715469 aatatatgttataaatggtatataatcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcttatttt-ggaattc 5715371  T
Q  103 tactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||| |||||||| |||||||||| | ||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  5715370 tactatgaatttaagttgttgaaggtgta-aaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 5715290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 24990018 - 24990201
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||| |    
T  24990018 taaatatatgttataaatagtatatagtcataaatgatttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctattttagga-t 24990116  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaatt 185  Q
    | |||||||||||| |||||||| |||| ||||||||| |||||||||  |||||  |||||||||||| |||||||||||||||    
T  24990117 tctactatggatttgagtcgttggaggtaaagaaagtcacaaaatcctaaatttttggatttaagtcggaattttgacaacaatt 24990201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 4 - 184
Target Start/End: Complemental strand, 27221597 - 27221418
Alignment:
Q  4 atatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggattttt 103  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| | |||||| || || |    
T  27221597 atatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaaga-ttct 27221499  T
Q  104 actatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||  ||||||  |||||||| |||||||| ||||||||    
T  27221498 actatgtatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttaacaacaat 27221418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 24725424 - 24725606
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| |||| |||||| |||||||  || |    
T  24725424 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtcaaatcgtaatcaaaattgatggattttgcctattttgcga-t 24725522  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | |||||||||||| ||| |||||||||||||||||||| |||||| | ||||||| |||||||||| ||||||||||||||||    
T  24725523 tctactatggatttgagttgttgaaggtgaagaaagtcgtaaaatcttggattttaggatttaagtctggattttgacaacaat 24725606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 26281257 - 26281438
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||  |||||| ||| |    
T  26281257 taaatataagttataaatggtatatagtcataaatgacttagtttataagaaatcgttaaatcgcaa-caaaatcgatggattttgcttatttt-ggaat 26281354  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | ||| |||||||| |||||||||||||||||||||||||||||||||  |||||| |||||||||||| ||||||||||||||    
T  26281355 tctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaat 26281438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 8346479 - 8346660
Alignment:
Q  1 taaatatattttataaa-tggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggat 99  Q
    ||||||||| ||||||| || ||||||| |||| |||||||||||||||||||||| |||||||||||| |||||||||| |||||  ||||||| ||||    
T  8346479 taaatatatgttataaaatgatatatagacatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcgatggatttttcctattttgggat 8346578  T
Q  100 ttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaaca 182  Q
    | | ||||||||||| |||||||||||||||||||||||||||||||||  ||||||| ||||| ||| ||||||||||||||    
T  8346579 tct-actatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaatatttaggtcaggattttgacaaca 8346660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 9685220 - 9685373
Alignment:
Q  30 ataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtg 129  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| | | || || ||||||||| ||||||||||||||    
T  9685220 ataaatgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattttgtctatttt-gaaattctaatatggatttgagtcgttgaaggtg 9685318  T
Q  130 aagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    || ||||||||||||||||  |||||| ||| ||||||| |||||||||||||||    
T  9685319 aaaaaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaat 9685373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 8330006 - 8330174
Alignment:
Q  15 aaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggattt 114  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| |||||||||  ||||||| ||| || ||||||||||||    
T  8330006 aaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaattaaaatcaatgaatttttcctattttggga-ttctactatggattt 8330104  T
Q  115 aagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
     | ||||||||||||||||||||||||||||| |  ||||||  ||||| ||| ||||||||||||||||    
T  8330105 gaatcgttgaaggtgaagaaagtcgcaaaatcatgaattttagaatttaggtcaggattttgacaacaat 8330174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 17811529 - 17811385
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||  | |    
T  17811529 taaatatattttataaatggtatataattataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatcgattttgtctatttta-aaat 17811431  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatc 146  Q
    | |||||||||||| |||||||||||||||| |||||| |||||||    
T  17811430 tctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatc 17811385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 11325148 - 11324988
Alignment:
Q  13 ataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||||||| |||||||| || || || |||||||    
T  11325148 ataattggtatatagtcataaatgacttagtttataagaaatcgtaaattcgcaatcaaaat-tatgaattttgcctatttta-gaattctattatggat 11325051  T
Q  113 ttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggatttt 175  Q
    || |||||||||||||||||||| || ||||||| |  |||||| ||||||||||||||||||    
T  11325050 ttgagtcgttgaaggtgaagaaaatcccaaaatcatgaattttaggatttaagtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 8343761 - 8343929
Alignment:
Q  15 aaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggattt 114  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||||||||||| ||||| |||| |||||   |||||| ||||| | |||||||||||    
T  8343761 aaatggtatataatcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaattgatggatttttcatattttgggattct-actatggattt 8343859  T
Q  115 aagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
     ||||||||||||||||||||||||||||||||  ||||||| |||||| | |  |||||||||||||||    
T  8343860 gagtcgttgaaggtgaagaaagtcgcaaaatccaggattttaggatttaggccaagattttgacaacaat 8343929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 22687631 - 22687793
Alignment:
Q  21 tatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcg 120  Q
    ||||||||||| || |  ||||||| ||||||||| ||||||||||||||||||||||| |||||| ||||||| ||||| |  | |||||||| ||| |    
T  22687631 tatatagtcatcaaggttttagtttgtaagaaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttgggattctg-cgatggatttgagttg 22687729  T
Q  121 ttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||| |||||||||||||||| ||||  |||||| |||||||||||||||||||||||||||    
T  22687730 ttgaagttgaagaaagtcgcaaattcctgaattttaggatttaagtcgggattttgacaacaat 22687793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 7730319 - 7730471
Alignment:
Q  30 ataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtg 129  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||||||| |||||  ||||||| ||| || |||| ||||||| ||| ||| ||||||    
T  7730319 ataaatgatttagtttataagaaatcgtaaaatctcaatcaaaatcgatggatttttcctatttt-ggaattctactgtggatttgagttgttaaaggtg 7730417  T
Q  130 aagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||||||||||| ||| ||||||| |||||||||| ||||||||||||||||    
T  7730418 aagaaagtcgcaaaa-cctggattttaggatttaagtcaggattttgacaacaat 7730471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 8571367 - 8571250
Alignment:
Q  59 aaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaag 158  Q
    |||||||||||||||||||||  |||| |||||||||||||| | ||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| |    
T  8571367 aaatcgcaatcaaaatcgatggtttttctctattttaggattct-actatggatttgagtcgttaaaggtgaagaaagtcgcaaaatcctggattttatg 8571269  T
Q  159 atttaagtcgggattttga 177  Q
    |||||||||||||||||||    
T  8571268 atttaagtcgggattttga 8571250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 57 - 184
Target Start/End: Complemental strand, 11326512 - 11326386
Alignment:
Q  57 taaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgatttta 156  Q
    ||||||||||||||||||||||  |||||| |||||||| |||| | ||||||||||| ||||| |||||||||||||||||||||||||||  ||||||    
T  11326512 taaaatcgcaatcaaaatcgatagattttgcctattttaagattct-actatggattttagtcgctgaaggtgaagaaagtcgcaaaatcctaaatttta 11326414  T
Q  157 agatttaagtcgggattttgacaacaat 184  Q
     ||||||||| |||||||||||||||||    
T  11326413 ggatttaagttgggattttgacaacaat 11326386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 45 - 184
Target Start/End: Complemental strand, 39182397 - 39182260
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaa 144  Q
    ||||||||||  ||||||||||| ||||||||||| |||||| ||||||| ||||| | ||||||||||| ||||||||||||||||||| |||||||||    
T  39182397 tataagaaattgtaaaatcgcaaccaaaatcgatggattttgcctattttgggattct-actatggatttcagtcgttgaaggtgaagaa-gtcgcaaaa 39182300  T
Q  145 tccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||| ||||||| |||||||||| |||||||| |||||||    
T  39182299 tcctagattttaggatttaagtcaggattttgtcaacaat 39182260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 20570832 - 20571002
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||| ||||||||||||||  || |    
T  20570832 taaatatatgttataaatggtatatagtcataaatgacttattttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctatttttaga-t 20570930  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgac 178  Q
    | |||||| |||||| ||      || ||||||||||| ||||||| | ||||| |  ||||||||||||| ||||||    
T  20570931 tctactatagatttaggt------agatgaagaaagtcacaaaatcttggatttcagaatttaagtcgggagtttgac 20571002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 25 - 156
Target Start/End: Original strand, 27509914 - 27510044
Alignment:
Q  25 tagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttga 124  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||   | || |||||| ||||| | ||||||     
T  27509914 tagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatgaattttgcctatttt-taaattctactatagatttgaatcgttgg 27510012  T
Q  125 aggtgaagaaagtcgcaaaatccttgatttta 156  Q
    | ||||||||| ||||||||||||| ||||||    
T  27510013 atgtgaagaaaatcgcaaaatcctttatttta 27510044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 1977790 - 1977692
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaa 144  Q
    ||||||||||| ||||||||||||||||||||| ||||||||  |||||||||| || |||||||||||| |||||||||||||| | ||| ||||||||    
T  1977790 tataagaaatcctaaaatcgcaatcaaaatcgacgaattttgcatattttagga-ttctactatggatttgagtcgttgaaggtggaaaaaatcgcaaaa 1977692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 26617423 - 26617605
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctat-tttaggat 99  Q
    ||||||||| |||||||||    |||||||||||||||||||| || ||||  || ||||||||||||||||||||||  |||||| |||| |||  ||     
T  26617423 taaatatatgttataaatg----atagtcataaatgacttagtctacaagatctcgtaaaatcgcaatcaaaatcgatagattttgcctatattttagaa 26617518  T
Q  100 ttttac--tatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    || |||  |||| ||||| ||||||||||||||| ||||||||||||||||  |||||| |||| ||||| | ||||| | ||||||    
T  26617519 ttctactatatgaatttatgtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggattaaagtcagaattttcaaaacaat 26617605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 6916961 - 6916786
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||||| ||| ||| |||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| |||||  |  ||||| || |    
T  6916961 taaatatatgttataactggaata-agtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaaccgatggattttaac--tttta-gaat 6916866  T
Q  101 tttactatggatttaagtcgttgaaggtg-aagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | ||||||| |||| ||||     ||||| || ||| ||||||||||||  |||| ||||||||| |||||||||||||||||||    
T  6916865 tctactatgaatttgagtc-----aggtgaaaaaaaatcgcaaaatcctaaatttcaagatttaaatcgggattttgacaacaat 6916786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 184
Target Start/End: Original strand, 21846433 - 21846554
Alignment:
Q  61 atcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagat 160  Q
    ||||||||||||||||||  |||||  || |||||| ||| | ||||||||| | |||||||||| ||||| ||||||||||||||||  ||||||  ||    
T  21846433 atcgcaatcaaaatcgattgattttacctgttttagaattct-actatggatgtgagtcgttgaatgtgaa-aaagtcgcaaaatcctgaattttagaat 21846530  T
Q  161 ttaagtcgggattttgacaacaat 184  Q
    ||||||||||||||||||||||||    
T  21846531 ttaagtcgggattttgacaacaat 21846554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 185
Target Start/End: Complemental strand, 30294256 - 30294174
Alignment:
Q  100 ttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaatt 185  Q
    |||| |||||||||| |||||   |||||||| ||| || ||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  30294256 ttttgctatggatttgagtcg---aaggtgaataaaatcacaaaatcctggattttaggatttaagttgggattttgacaacaatt 30294174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 8630006 - 8630087
Alignment:
Q  103 tactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||||||| ||||||||||| | |  ||||| |||||||||| ||||||  || |||||||| |||||||||||||||    
T  8630006 tactatggatttgagtcgttgaagttaagtaaagttgcaaaatcctagattttgggacttaagtcgcgattttgacaacaat 8630087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 21157811 - 21157903
Alignment:
Q  91 ttttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||||||||  |||||||||| |||||||| | ||||  |||||||||||| |||  ||||||||||||||||| | |||| |||||||||    
T  21157811 ttttaggattttg-ctatggatttgagtcgttgtaagtgagtaaagtcgcaaaaccctgaattttaagatttaagtcagaatttcgacaacaat 21157903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 4247597 - 4247557
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  4247597 tataagaaatcataaaatcgcaatcaaaatcgatggatttt 4247557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 5715526 - 5715486
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||| ||||| ||||||||||||||||||||||||||||||    
T  5715526 tataggaaattataaaatcgcaatcaaaatcgatgaatttt 5715486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 6917020 - 6916980
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  6917020 tataagaaattataaaattgcaatcaaaatcgatgaatttt 6916980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21846393 - 21846433
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgactta 41  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  21846393 taaatatatgttataaatgatatatagtcataaatgactta 21846433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 4574537 - 4574475
Alignment:
Q  118 tcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaa 180  Q
    |||||||||||||  ||||||||||||| || ||||||| ||||||||||  |||||| ||||    
T  4574537 tcgttgaaggtgagtaaagtcgcaaaattctggattttaggatttaagtcatgattttcacaa 4574475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 24989661 - 24989701
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||| ||||| |||||||||||||||||||||||| |||||    
T  24989661 tataggaaattataaaatcgcaatcaaaatcgatggatttt 24989701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 3e-61; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 29067450 - 29067284
Alignment:
Q  17 atggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaa 116  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| ||| || |||||||||||| |    
T  29067450 atggtatatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttggga-ttctactatggatttga 29067352  T
Q  117 gtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||||||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||    
T  29067351 gtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 29067284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 28745958 - 28745770
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataa------gaaatcataaaatcgcaatcaaaatcgatgaattttgtctatttt 94  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||      |||||| ||||||||||||||||||||||||||||||||||||||    
T  28745958 taaatatatgttataaatagtatatagtcataaatgacttagtttataattataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgtctatttt 28745859  T
Q  95 aggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
      |||| | |||||| |||| |||||||||||||||||||||||||||||||||  |||||| ||||||| |||||||||||||||||||    
T  28745858 gagattct-actatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaaatcgggattttgacaacaat 28745770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 39428084 - 39427905
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||| ||| |    
T  39428084 taaatatatgttataagtagtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggactttgtctattttggga-t 39427986  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaac 181  Q
    | |||||| ||||| |||||||||| ||||||||||| |||||||||  |||||||| |||||| ||||||||||||||||    
T  39427985 tctactatcgatttgagtcgttgaacgtgaagaaagttgcaaaatccaggattttaaaatttaaatcgggattttgacaac 39427905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 21 - 179
Target Start/End: Complemental strand, 17064483 - 17064326
Alignment:
Q  21 tatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcg 120  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| || || ||||||| |||  |||||    
T  17064483 tatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaataaaaatcgatgaattttgtctatttta-gaattctactatgaattggagtcg 17064385  T
Q  121 ttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgaca 179  Q
    ||||||||||| | | ||||||||||||  |||||||||||||||||||||||||||||    
T  17064384 ttgaaggtgaacacaatcgcaaaatcctgaattttaagatttaagtcgggattttgaca 17064326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 24620147 - 24620332
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||  || |    
T  24620147 taaatatattttataaatggtatataatcataaatgacttagtttataagaaatcgtaaaattgcaattaaaatcgatgaattttgcctattttgaga-t 24620245  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaa---gtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | |||| || |||| ||||||||||||||||||||   ||||||||||| |  |||||| |||||||||||| ||||||||||||||    
T  24620246 tctactgtgaatttgagtcgttgaaggtgaagaaagtcgtcgcaaaatcttaaattttaggatttaagtcggaattttgacaacaat 24620332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 8156077 - 8156260
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||| ||  |    
T  8156077 taaatatatgttataaatggtatatagttataaataacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgtctaattttgggat 8156176  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | |||||||||||| |||| ||||||||||| ||| ||| ||||| ||  ||||||  |||||||| |||||||||||||||||    
T  8156177 tatactatggatttgagtcattgaaggtgaaaaaaatcgtaaaattctgaattttagaatttaagttgggattttgacaacaat 8156260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 30 - 184
Target Start/End: Complemental strand, 20756192 - 20756039
Alignment:
Q  30 ataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtg 129  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||  |||||| |||||||| |||| | ||||||||||| |||| |||||||||    
T  20756192 ataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgattgattttgcctattttaagattct-actatggatttgagtcattgaaggtg 20756094  T
Q  130 aagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||| ||||||||||||  ||||||  ||||||||||||||||||||||||||    
T  20756093 aagaaaatcgcaaaatcctgaattttataatttaagtcgggattttgacaacaat 20756039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 27 - 183
Target Start/End: Original strand, 3449265 - 3449419
Alignment:
Q  27 gtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaag 126  Q
    |||| |||||||||| ||||||||||||| |||||||||||| |||||| ||| |||||| ||||||||||||| | ||||| ||||| || ||||||||    
T  3449265 gtcacaaatgacttactttataagaaatcgtaaaatcgcaataaaaatctatggattttgcctattttaggattct-actatagattttag-cgttgaag 3449362  T
Q  127 gtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaa 183  Q
    || |||||||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  3449363 gtaaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaa 3449419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 22494735 - 22494892
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||       | ||||||||||||||||||||||||||||||| |||||||||| |    
T  22494735 taaatatatgttataaatggtatatagtcataactgacttagtttat-------cgtaaaatcgcaatcaaaatcgatgaattttgtttattttagga-t 22494826  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagt 166  Q
    | ||||||| |||| |||||||||||||||| ||||||||||||||   ||||||| |||||||||    
T  22494827 tctactatgaattttagtcgttgaaggtgaaaaaagtcgcaaaatctcagattttaggatttaagt 22494892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 21963590 - 21963438
Alignment:
Q  21 tatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcg 120  Q
    |||||||||||||||||||||||  ||||||||||  |||||||| ||||||||||||| ||||||  |||||||||||||| ||||||||||| |||||    
T  21963590 tatatagtcataaatgacttagtaaataagaaatcg-aaaatcgctatcaaaatcgatggattttgcatattttaggatttt-actatggatttgagtcg 21963493  T
Q  121 ttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggatttt 175  Q
    || |||||||||||||||| |||||| |  |||||| ||||||||||||||||||    
T  21963492 ttcaaggtgaagaaagtcgtaaaatcttgaattttaggatttaagtcgggatttt 21963438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 21986026 - 21985874
Alignment:
Q  21 tatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcg 120  Q
    |||||||||||||||||||||||  ||||||||||  |||||||| ||||||||||||| ||||||  |||||||||||||| ||||||||||| |||||    
T  21986026 tatatagtcataaatgacttagtaaataagaaatcg-aaaatcgctatcaaaatcgatggattttgcatattttaggatttt-actatggatttgagtcg 21985929  T
Q  121 ttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggatttt 175  Q
    || |||||||||||||||| |||||| |  |||||| ||||||||||||||||||    
T  21985928 ttcaaggtgaagaaagtcgtaaaatcttgaattttaggatttaagtcgggatttt 21985874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 42697028 - 42696936
Alignment:
Q  2 aaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctatttt 94  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  42697028 aaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttt 42696936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 57 - 184
Target Start/End: Original strand, 30727694 - 30727820
Alignment:
Q  57 taaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgatttta 156  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | ||||| ||||| |||||||||||||||||||||||| ||||| |  |||||||    
T  30727694 taaaatcgcaatcaaaatcgatgaattttgtctattttgggattct-actatagatttgagtcgttgaaggtgaagaaagtcgtaaaattcaggatttta 30727792  T
Q  157 agatttaagtcgggattttgacaacaat 184  Q
    ||||||||||| ||||||||| ||||||    
T  30727793 agatttaagtcaggattttgataacaat 30727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 22137449 - 22137278
Alignment:
Q  11 ttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatgg 110  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||  ||||||||||| |||||||||| ||||||  |||||| ||||||| |||||||    
T  22137449 ttataaatagtatatagtcataaatgacttagtaaataagaaatcg-aaaatcgcaattaaaatcgatggattttgcatattttgggatttt-actatgg 22137352  T
Q  111 atttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||| || |||| |||||||||||||||| || ||| |  |||||| |||||||||| ||||||| | ||||||    
T  22137351 atttgaggcgttcaaggtgaagaaagtcgtaacatcttgaattttaggatttaagtcaggattttaaaaacaat 22137278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 50 - 184
Target Start/End: Original strand, 24649684 - 24649818
Alignment:
Q  50 gaaatcataaaatcgcaatcaaaatcgatgaattttg-tctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatcct 148  Q
    |||||| ||||||| || ||||||| ||||||||||| | |||||| ||| || |||||||||||| ||||||||||||||||| |||||  ||||||||    
T  24649684 gaaatcgtaaaatcacagtcaaaattgatgaattttgctttatttt-ggaattctactatggatttgagtcgttgaaggtgaagcaagtcaaaaaatcct 24649782  T
Q  149 tgattttaagatttaagtcgggattttgacaacaat 184  Q
     ||||||| |||||||||||||||||||||||||||    
T  24649783 agattttacgatttaagtcgggattttgacaacaat 24649818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 15515203 - 15515297
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctatttta 95  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||| | | |||||||| |||||||  ||||||||    
T  15515203 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtgaaatcgaagttaaaatcgacgaatttttcctatttta 15515297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 184
Target Start/End: Original strand, 22356029 - 22356182
Alignment:
Q  31 taaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtg- 129  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  ||| ||||||  |||||||||| || ||||||| ||| || | ||||||| ||     
T  22356029 taaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattcatggattttgcttattttagga-ttctactatgaattcaaattgttgaagctga 22356127  T
Q  130 aagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    || ||| ||  ||||||||  |||||| |||||||||||| ||||||| ||||||    
T  22356128 aaaaaaatcttaaaatcctgaattttaggatttaagtcggaattttgataacaat 22356182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 17796477 - 17796377
Alignment:
Q  83 tttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaaca 182  Q
    |||||||||||||||||| |  ||||| |||| ||| ||||||| |||| ||||||| |||||||| ||||||| |||||||||||| ||||||||||||    
T  17796477 tttgtctattttaggattctg-ctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaaca 17796379  T
Q  183 at 184  Q
    ||    
T  17796378 at 17796377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 17796586 - 17796486
Alignment:
Q  83 tttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaaca 182  Q
    |||||||||||||||||| |  ||||| |||||||| |||||||||||| ||||||| |||||||| ||||||| ||||||| |||  ||||||||||||    
T  17796586 tttgtctattttaggattctg-ctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaaca 17796488  T
Q  183 at 184  Q
    ||    
T  17796487 at 17796486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 19104917 - 19104817
Alignment:
Q  83 tttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaaca 182  Q
    |||||||||||||||||| |  ||||| |||| ||| ||||||| |||| ||||||| |||||||| ||||||| |||||||||||| ||||||||||||    
T  19104917 tttgtctattttaggattctg-ctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaaca 19104819  T
Q  183 at 184  Q
    ||    
T  19104818 at 19104817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 19105026 - 19104926
Alignment:
Q  83 tttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaaca 182  Q
    |||||||||||||||||| |  ||||| |||||||| |||||||||||| ||||||| |||||||| ||||||| ||||||| |||  ||||||||||||    
T  19105026 tttgtctattttaggattctg-ctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaaca 19104928  T
Q  183 at 184  Q
    ||    
T  19104927 at 19104926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 27676435 - 27676356
Alignment:
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||||| |||| | ||||||||| ||||||||||||||||  |||||| |||||||||| ||||||||||||||||    
T  27676435 ctatggatttgagtcatagaaggtgaataaagtcgcaaaatcctgcattttacgatttaagtcaggattttgacaacaat 27676356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 180
Target Start/End: Complemental strand, 17796368 - 17796272
Alignment:
Q  83 tttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaa 180  Q
    |||||||||||||||||| |  ||||| |||| ||| |||||||||||| |||||| ||||||||| ||||||| ||||||||| || ||||||||||    
T  17796368 tttgtctattttaggattctg-ctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaa 17796272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 180
Target Start/End: Complemental strand, 19104808 - 19104712
Alignment:
Q  83 tttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaa 180  Q
    |||||||||||||||||| |  ||||| |||| ||| |||||||||||| |||||| ||||||||| ||||||| ||||||||| || ||||||||||    
T  19104808 tttgtctattttaggattctg-ctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaa 19104712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 37 - 184
Target Start/End: Original strand, 25870350 - 25870505
Alignment:
Q  37 acttagtttataagaaatcataaaatcgcaatcaaaatc-----gatgaattttgtctatttt-aggatttttactatggatttaagtcgtt----gaag 126  Q
    ||||| ||||||||||||| |||||||||||||||||||     |||| |||||| ||||||| |||  || ||||| | |||| |||||||    ||||    
T  25870350 acttaatttataagaaatcgtaaaatcgcaatcaaaatcaaatcgatggattttgcctattttgagg--ttctactacgaatttgagtcgttcgttgaag 25870447  T
Q  127 gtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
     ||||||||||| ||||||| | ||||||| ||||||||||| |||||||||||||||    
T  25870448 atgaagaaagtcacaaaatcttggattttaggatttaagtcgagattttgacaacaat 25870505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 15806556 - 15806634
Alignment:
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||||| |||| ||||||||||| ||||||||||||| || |||| || |||||||||| ||||||||||||||||    
T  15806556 ctatggatttgagtcattgaaggtgaataaagtcgcaaaattctggattgtaggatttaagtc-ggattttgacaacaat 15806634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 79 - 183
Target Start/End: Complemental strand, 28135826 - 28135723
Alignment:
Q  79 gaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgac 178  Q
    |||||||| |||||| || |||||  |||||||||| ||||  |||| ||||| ||||||||||||||||  |||||| ||||||| |||| ||||||||    
T  28135826 gaattttgcctatttgagaattttg-ctatggatttgagtcactgaaagtgaataaagtcgcaaaatcctgaattttacgatttaaatcggaattttgac 28135728  T
Q  179 aacaa 183  Q
    |||||    
T  28135727 aacaa 28135723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 10872996 - 10873065
Alignment:
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattt 174  Q
    |||||||||| |||||||||||||||| ||  || ||||||||| ||||||| ||||| | |||||||||    
T  10872996 ctatggatttgagtcgttgaaggtgaataatatcacaaaatcctggattttaggatttcaatcgggattt 10873065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 42696914 - 42696870
Alignment:
Q  136 gtcgcaaaatccttgattttaagatttaagtcgggattttgacaa 180  Q
    |||||||||||||  |||||| |||||||||||||||||||||||    
T  42696914 gtcgcaaaatcctgaattttatgatttaagtcgggattttgacaa 42696870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 42697089 - 42697049
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  42697089 tataagaaatcataaactcgcaatcaaaatcgatggatttt 42697049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 9152941 - 9152984
Alignment:
Q  12 tataaatggtatatagtcataaatgacttagtttataagaaatc 55  Q
    |||| ||| ||||||||||||||| |||||||||||||||||||    
T  9152941 tatacatgatatatagtcataaataacttagtttataagaaatc 9152984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 25614037 - 25614110
Alignment:
Q  107 atggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaa 180  Q
    |||||||| | |||| ||| ||||  |||||||||||||| | |||||||| ||||||||| ||||||| ||||    
T  25614037 atggatttgaatcgtcgaaagtgagcaaagtcgcaaaatcatagattttaaaatttaagtcaggatttttacaa 25614110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 6136457 - 6136497
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    ||||||||||| ||||||| ||||||||||||||| |||||    
T  6136457 tataagaaatcgtaaaatcacaatcaaaatcgatggatttt 6136497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 79
Target Start/End: Original strand, 6861033 - 6861061
Alignment:
Q  51 aaatcataaaatcgcaatcaaaatcgatg 79  Q
    |||||||||||||||||||||||||||||    
T  6861033 aaatcataaaatcgcaatcaaaatcgatg 6861061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8592359 - 8592399
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgactta 41  Q
    ||||||||| |||||||| | ||||||||||||||||||||    
T  8592359 taaatatatgttataaattgcatatagtcataaatgactta 8592399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 13005987 - 13005927
Alignment:
Q  124 aaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||| |||||||||||||  |  ||||| | |||||||||| |||||||||||||||    
T  13005987 aaggtgaataaagtcgcaaaattatgaattttgaaatttaagtcgagattttgacaacaat 13005927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 25870210 - 25870250
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    ||||||||||  ||||||||||||||||||||||| |||||    
T  25870210 tataagaaattgtaaaatcgcaatcaaaatcgatggatttt 25870250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 4e-60; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 23172375 - 23172560
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgat----gaattttgtctattttag 96  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||    |||||||||||||||| |    
T  23172375 taaatatatgttacaaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcgatcaaaatcgatcgatgaattttgtctattttgg 23172474  T
Q  97 gatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaa 183  Q
    |||| | ||||||||||||||||||||||| |||||||||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  23172475 gattct-actatggatttaagtcgttgaagatgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaa 23172560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 21059103 - 21059289
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||  |    
T  21059103 taaatatatgttataaatggtttatagtcataaatgacttcgtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgccta-tttagggat 21059201  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaattgtta 189  Q
    | ||| |||||||| |||||||||| |||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| ||||    
T  21059202 tctac-atggatttgagtcgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaatggtta 21059289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 43235046 - 43234868
Alignment:
Q  5 tatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggattttta 104  Q
    ||||| ||||||||||| ||||| |||||||||||||||| |||||||||| ||||||| ||||||||||||||| |||||  ||||||||||||| | |    
T  43235046 tatatgttataaatggtttatagacataaatgacttagttgataagaaatcgtaaaatcacaatcaaaatcgatggatttttcctattttaggattct-a 43234948  T
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||||||||    
T  43234947 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagttgggattttgacaacaat 43234868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 18843897 - 18843716
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||| |    
T  18843897 taaatatatgttataaatggtatataatcataaatgacttagtttataagaaatcgtataattgcaatcaaaatcgatgaattttgtctattttggga-t 18843799  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaa 183  Q
    | ||| |||||||| |||||||||||||||||||||||||||||||||  ||| || |||||||||||| ||||| |||||||    
T  18843798 tctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattataggatttaagtcggaattttaacaacaa 18843716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 2 - 184
Target Start/End: Complemental strand, 19579123 - 19578942
Alignment:
Q  2 aaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggattt 101  Q
    |||||||| |||| ||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||  |||||| ||| ||    
T  19579123 aaatatatgttatgaatggtaaatagtcataaatgacttagtttataagaaatcgtaaagtcgcaatcaaaatcgatggattttgcttattttggga-tt 19579025  T
Q  102 ttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
     ||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| || ||||||||||||||    
T  19579024 ctactatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctggattttatgatttaagttggaattttgacaacaat 19578942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 18051480 - 18051659
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||| ||||||||| |||    
T  18051480 taaatatatgttataaat--tatat-gtcataaatgacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttagaatt 18051576  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
     | ||||| ||||| ||||||||||| |||||||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  18051577 ct-actatagatttgagtcgttgaagttgaagaaagtcgcaaaatcctatattttaggatttaagtcgggattttgacaacaat 18051659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 22645681 - 22645848
Alignment:
Q  17 atggtatatagtcataaatgac-ttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggattta 115  Q
    |||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||| |||| | |||   |||||| ||||||| ||||||||||||    
T  22645681 atggtatatagtcataaatgacattagtttataagaaattgtaaaatcgcaatcaaaatagatggaatttacttattttgggatttt-actatggattta 22645779  T
Q  116 agtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | |||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  22645780 aatcgttgaaggtgaagaaagtcgcaaaatactggattttaggatttaagtcgggattttgacaacaat 22645848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 41688612 - 41688782
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| |||| ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| || |    
T  41688612 taaatatatgttatgaatggtatatagttataaatgatttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttatttta-gaat 41688710  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggatt 173  Q
    ||||||||  ||||||||||||||||||||||||| | |||||||||   |||||| ||||||||| ||||||    
T  41688711 tttactataaatttaagtcgttgaaggtgaagaaaattgcaaaatcc-gaattttaggatttaagttgggatt 41688782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 27340137 - 27340307
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||| ||||||||||||||    ||||||||||||||||||||||  ||||||| |||||||||||||||||||||| |||||||| || |    
T  27340137 taaatatatgttacaaatggtatatagt----aatgacttagtttataagaaatattaaaatctcaatcaaaatcgatgaattttgcctattttaaga-t 27340231  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttg 176  Q
    | |||||| ||||| ||||||||||| ||||||||||||||||||| |  |||||| |||||||||||||||||||    
T  27340232 tctactatagatttgagtcgttgaagatgaagaaagtcgcaaaatcataaattttatgatttaagtcgggattttg 27340307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 21 - 187
Target Start/End: Original strand, 38158221 - 38158386
Alignment:
Q  21 tatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcg 120  Q
    ||||||||||||||||| ||||||||||||||||| ||||||  ||| ||||||| ||| |||||||||||||| ||||| | ||| ||||||| ||| |    
T  38158221 tatatagtcataaatgatttagtttataagaaatcgtaaaataacaaccaaaatcaatggattttgtctattttgggattct-actctggatttgagttg 38158319  T
Q  121 ttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaattgt 187  Q
    ||||| || ||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||    
T  38158320 ttgaaagtcaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaattgt 38158386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 20923843 - 20923717
Alignment:
Q  58 aaaatcgcaatcaaaatcgatgaattttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaa 157  Q
    |||||||||||||||||||||| | |||| ||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||| || |||||||     
T  20923843 aaaatcgcaatcaaaatcgatggactttgcctattttaggattct-actatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctggattttag 20923745  T
Q  158 gatttaagtcgggattttgacaacaatt 185  Q
    ||||||||||||||||||||||||||||    
T  20923744 gatttaagtcgggattttgacaacaatt 20923717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 20321124 - 20320992
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||||||| |||| |||||||||||||||| | |||||||||| |||||||| ||| |    
T  20321124 taaatatatgttataaatgatatatggtcataaatgacttagtttataag-aatcgtaaaatcgcaatcaaagttgatgaattttatctatttt-ggaat 20321027  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaa 135  Q
    |||||||||||||| |||| |||||||||||||||    
T  20321026 tttactatggattttagtcattgaaggtgaagaaa 20320992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 19979781 - 19979648
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||  | |||| ||| |    
T  19979781 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatccatggattttgcgtgttttggga-t 19979683  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaa 135  Q
    | ||| ||| |||| ||||||||||| ||||||||    
T  19979682 tctaccatgaatttgagtcgttgaagatgaagaaa 19979648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 18260901 - 18260764
Alignment:
Q  186 gttacgaggtattgtccactttggatgtaactccttcacgattttatcctttttaaaaacacctcattagtttgaagaatatggatgttgtttataaact 285  Q
    ||||||| ||||||||| |||| || ||||||||||||||||||| ||||||||||||  ||||||||  |||||||||||| | |||||||||||||||    
T  18260901 gttacgatgtattgtccgctttagacgtaactccttcacgattttgtcctttttaaaag-acctcattgatttgaagaatataggtgttgtttataaact 18260803  T
Q  286 actctagagctcgacttttcagctatgtgagacttttaa 324  Q
    ||||| || ||||| |||| ||| |||||||||||||||    
T  18260802 actctggatctcgattttttagcgatgtgagacttttaa 18260764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 182
Target Start/End: Original strand, 19042444 - 19042516
Alignment:
Q  110 gatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaaca 182  Q
    ||||| ||||||||||||||||||||||| ||||||| |  ||||||  |||||||| |||||||||||||||    
T  19042444 gatttgagtcgttgaaggtgaagaaagtcacaaaatcttaaattttagaatttaagttgggattttgacaaca 19042516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 20320990 - 20320926
Alignment:
Q  118 tcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaaca 182  Q
    |||||||||||||||||||| |||||||| |  |||||| |||||| || |||||||||||||||    
T  20320990 tcgttgaaggtgaagaaagttgcaaaatcttaaattttaggatttaggttgggattttgacaaca 20320926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 24106714 - 24106645
Alignment:
Q  111 atttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaa 180  Q
    |||| ||||||||  |||||||||||| ||||||||||  |||||| ||||||| || ||||||||||||    
T  24106714 atttgagtcgttgctggtgaagaaagttgcaaaatcctgaattttatgatttaaatcaggattttgacaa 24106645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 19042406 - 19042442
Alignment:
Q  42 gtttataagaaatcataaaatcgcaatcaaaatcgat 78  Q
    |||||||||||||| ||||||||||||||||||||||    
T  19042406 gtttataagaaatcgtaaaatcgcaatcaaaatcgat 19042442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 21059045 - 21059085
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  21059045 tataagaaattataaaatcgcaatcaaaatcgatggatttt 21059085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 24647990 - 24647939
Alignment:
Q  133 aaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||||| ||| |  ||||||||||||||||||| ||||||||||||||    
T  24647990 aaagtcgcaatatcttaaattttaagatttaagtcggaattttgacaacaat 24647939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24648198 - 24648160
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgact 39  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  24648198 taaatatatattataaattgtatatagtcataaatgact 24648160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26021502 - 26021464
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgact 39  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  26021502 taaatatatgttataaattgtatatagtcataaatgact 26021464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19377782 - 19377742
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgactta 41  Q
    ||||||||| |||||||| | ||||||||||||||||||||    
T  19377782 taaatatatgttataaattggatatagtcataaatgactta 19377742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 85
Target Start/End: Original strand, 23172328 - 23172356
Alignment:
Q  57 taaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||||||||||||||||||||||||||||    
T  23172328 taaaatcgcaatcaaaatcgatgaatttt 23172356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41427588 - 41427548
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgactta 41  Q
    ||||||||| |||||||| | ||||||||||||||||||||    
T  41427588 taaatatatattataaattgcatatagtcataaatgactta 41427548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 85
Target Start/End: Original strand, 41688566 - 41688594
Alignment:
Q  57 taaaatcgcaatcaaaatcgatgaatttt 85  Q
    |||||||||||||||||||||||||||||    
T  41688566 taaaatcgcaatcaaaatcgatgaatttt 41688594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 116; Significance: 7e-59; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 8625 - 8443
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||  |||||| ||| |    
T  8625 taaatatatggtataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgcttattttggga-t 8527  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | ||| || ||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||| |||||||||||||||||    
T  8526 tctacaatagatttaagtcgttgaaggtgaagaaagtcgcaaaatcgtggattttaggatttaagtagggattttgacaacaat 8443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 7402 - 7584
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggatt 100  Q
    ||||||||| || ||| ||||||||| |||||||| |||| |||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| |    
T  7402 taaatatatgttctaattggtatatattcataaattacttcgtttataagaaatcgtaaaatcgcaattaaaatcgatgaattttgcctattttagga-t 7500  T
Q  101 tttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | ||||||||||||   ||||||||||| |||||||||||||||||||  ||||||  ||||||||||||||| | ||||||||    
T  7501 tctactatggattttgttcgttgaaggtaaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattctaacaacaat 7584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 93652 - 93833
Alignment:
Q  1 taaatatattttataaatggtatat-agtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgtctattttaggat 99  Q
    ||||||||| |||| ||| |||||| ||||||||| |||||| |||| |||||||| ||||||||||||||||||||||| |||| | ||||||||| ||    
T  93652 taaatatatgttatgaatcgtatattagtcataaacgacttaatttaaaagaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttagaat 93751  T
Q  100 ttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    | || |||||||||| ||| ||||| |||||||||| |  |||||| || ||||||| |||||||||||||||||||||||||||    
T  93752 tctt-ctatggatttgagttgttgagggtgaagaaaat--caaaattctggattttaggatttaagtcgggattttgacaacaat 93833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 93593 - 93633
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 85  Q
    ||||| ||||| ||||||||||||||||||||||| |||||    
T  93593 tataataaatcgtaaaatcgcaatcaaaatcgatggatttt 93633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 45 - 172
Target Start/End: Original strand, 91 - 218
Alignment:
Q  45 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt-gtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaa 143  Q
    ||||||||||  ||||||| ||||||||||||||| ||||| | ||||||||| ||||| ||||||||||| |||||||||| |||||||||||||||||    
T  91 tataagaaattgtaaaatctcaatcaaaatcgatggattttcgcctattttagaatttt-actatggatttgagtcgttgaacgtgaagaaagtcgcaaa 189  T
Q  144 atccttgattttaagatttaagtcgggat 172  Q
    |||||  |||||| |||||||||||||||    
T  190 atcctgcattttaggatttaagtcgggat 218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 48839 - 48917
Alignment:
Q  106 tatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    ||||||||| |||||||||||||||| ||||| ||||||| || ||||||| |||||||||||| ||||| ||||||||    
T  48839 tatggatttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaacaat 48917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 9049 - 9149
Alignment:
Q  83 tttgtctattttaggatttttactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaaca 182  Q
    |||| |||||| ||||||||  |||||||||| |||||||||||||||| ||| || |||||||||  ||||||| |||||| || ||||||||||||||    
T  9049 tttgcctatttaaggattttg-ctatggatttgagtcgttgaaggtgaataaaatcacaaaatcctacattttaaaatttaaatcaggattttgacaaca 9147  T
Q  183 at 184  Q
    ||    
T  9148 at 9149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8907 - 8952
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgacttagttta 46  Q
    ||||||||| |||||| | |||||||||||||||||||| ||||||    
T  8907 taaatatatgttataagttgtatatagtcataaatgactcagttta 8952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 37216 - 37295
Alignment:
Q  105 ctatggatttaagtcgttgaaggtgaagaaagtcgcaaaatccttgattttaagatttaagtcgggattttgacaacaat 184  Q
    |||||||||| ||| |||||||||||| ||| | ||||||| ||  ||||||| ||||||||||| ||||||||||||||    
T  37216 ctatggatttgagttgttgaaggtgaataaaattgcaaaattctgaattttaaaatttaagtcggcattttgacaacaat 37295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 58739 - 58790
Alignment:
Q  11 ttataaatggtatatagtcataaatgacttagtttataagaaatcataaaat 62  Q
    |||||| |||||||||||||||||||| ||||||||||||||||| ||||||    
T  58739 ttataagtggtatatagtcataaatgatttagtttataagaaatcgtaaaat 58790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38491 - 38531
Alignment:
Q  1 taaatatattttataaatggtatatagtcataaatgactta 41  Q
    ||||||||| |||||||| ||||||||||||||| ||||||    
T  38491 taaatatatgttataaattgtatatagtcataaaggactta 38531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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