View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17452_low_44 (Length: 360)

Name: NF17452_low_44
Description: NF17452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17452_low_44
NF17452_low_44
[»] chr3 (32 HSPs)
chr3 (22-198)||(34373416-34373588)
chr3 (217-346)||(27033596-27033725)
chr3 (232-346)||(34373791-34373905)
chr3 (217-346)||(2229928-2230057)
chr3 (217-341)||(34373591-34373715)
chr3 (217-346)||(43719948-43720077)
chr3 (237-346)||(46167358-46167467)
chr3 (219-335)||(19830443-19830560)
chr3 (217-346)||(40851718-40851848)
chr3 (232-339)||(48084779-48084887)
chr3 (232-346)||(12402925-12403040)
chr3 (232-329)||(550834-550931)
chr3 (263-345)||(31523670-31523752)
chr3 (263-339)||(42613071-42613147)
chr3 (263-345)||(49679272-49679354)
chr3 (232-345)||(566775-566888)
chr3 (151-201)||(2230052-2230102)
chr3 (288-346)||(24754673-24754731)
chr3 (288-346)||(24763670-24763728)
chr3 (151-200)||(19830387-19830436)
chr3 (262-345)||(40810357-40810441)
chr3 (151-201)||(24647907-24647957)
chr3 (151-201)||(24754726-24754776)
chr3 (151-201)||(24763723-24763773)
chr3 (263-339)||(1995435-1995511)
chr3 (154-201)||(46167462-46167509)
chr3 (151-201)||(34373900-34373950)
chr3 (151-201)||(43719903-43719953)
chr3 (232-293)||(52859434-52859496)
chr3 (276-345)||(29586340-29586409)
chr3 (276-345)||(33632827-33632895)
chr3 (153-201)||(40851843-40851891)
[»] chr7 (44 HSPs)
chr7 (217-346)||(25084729-25084858)
chr7 (232-346)||(9559055-9559169)
chr7 (217-346)||(21151097-21151226)
chr7 (217-346)||(45260428-45260557)
chr7 (217-345)||(7362513-7362641)
chr7 (232-346)||(4888427-4888541)
chr7 (217-346)||(16366463-16366592)
chr7 (217-346)||(12139273-12139401)
chr7 (238-346)||(44647928-44648038)
chr7 (217-335)||(18198201-18198319)
chr7 (24-150)||(15741674-15741794)
chr7 (232-346)||(47226077-47226188)
chr7 (247-345)||(39855815-39855913)
chr7 (237-345)||(47500284-47500393)
chr7 (217-339)||(29630993-29631115)
chr7 (232-345)||(33450466-33450580)
chr7 (263-345)||(47799902-47799984)
chr7 (232-339)||(32915919-32916023)
chr7 (280-345)||(19027685-19027751)
chr7 (280-345)||(20726885-20726951)
chr7 (263-339)||(30588526-30588602)
chr7 (275-339)||(46802339-46802403)
chr7 (275-345)||(989132-989202)
chr7 (280-345)||(14696759-14696825)
chr7 (263-339)||(19889042-19889118)
chr7 (275-339)||(32916172-32916236)
chr7 (151-201)||(21151221-21151271)
chr7 (280-345)||(30102501-30102567)
chr7 (249-345)||(34985947-34986045)
chr7 (152-201)||(45260384-45260433)
chr7 (149-201)||(18198325-18198377)
chr7 (280-327)||(4269187-4269234)
chr7 (150-201)||(16366587-16366638)
chr7 (150-201)||(44648033-44648084)
chr7 (154-201)||(47226035-47226082)
chr7 (151-201)||(9559010-9559060)
chr7 (275-345)||(28528554-28528624)
chr7 (232-293)||(40019641-40019702)
chr7 (149-201)||(12139396-12139448)
chr7 (297-345)||(29844316-29844364)
chr7 (150-201)||(4888536-4888587)
chr7 (287-345)||(35737128-35737186)
chr7 (277-345)||(47080433-47080502)
chr7 (277-345)||(7373872-7373940)
[»] chr8 (37 HSPs)
chr8 (219-346)||(30426670-30426797)
chr8 (232-346)||(28069679-28069793)
chr8 (217-346)||(36991301-36991430)
chr8 (222-339)||(24101966-24102083)
chr8 (219-346)||(40695248-40695375)
chr8 (219-346)||(41511209-41511336)
chr8 (221-339)||(10672520-10672638)
chr8 (217-326)||(28318923-28319032)
chr8 (232-345)||(45113230-45113344)
chr8 (227-326)||(44859188-44859287)
chr8 (232-346)||(10652618-10652733)
chr8 (237-312)||(8412219-8412294)
chr8 (263-345)||(26749550-26749632)
chr8 (217-339)||(37966451-37966572)
chr8 (262-339)||(6399914-6399991)
chr8 (275-339)||(34612567-34612631)
chr8 (296-338)||(5033108-5033150)
chr8 (280-345)||(17867661-17867727)
chr8 (217-298)||(12177613-12177694)
chr8 (217-298)||(12422041-12422122)
chr8 (232-337)||(36748502-36748602)
chr8 (263-345)||(1937156-1937239)
chr8 (232-337)||(6014154-6014260)
chr8 (232-286)||(27490067-27490121)
chr8 (151-201)||(36991425-36991475)
chr8 (149-201)||(5033321-5033373)
chr8 (263-339)||(30796269-30796344)
chr8 (275-339)||(42761716-42761780)
chr8 (150-201)||(28069788-28069839)
chr8 (151-201)||(10672470-10672520)
chr8 (149-201)||(10652571-10652623)
chr8 (280-327)||(11090509-11090556)
chr8 (280-327)||(30904969-30905016)
chr8 (151-201)||(30426625-30426675)
chr8 (277-334)||(3763535-3763592)
chr8 (276-345)||(18689495-18689564)
chr8 (271-335)||(28403164-28403228)
[»] chr5 (42 HSPs)
chr5 (232-346)||(35660610-35660724)
chr5 (217-346)||(4895736-4895865)
chr5 (217-346)||(32129618-32129747)
chr5 (219-346)||(37266678-37266805)
chr5 (232-346)||(18625422-18625536)
chr5 (217-346)||(14349749-14349877)
chr5 (217-346)||(40753163-40753292)
chr5 (217-346)||(39902360-39902489)
chr5 (217-346)||(11775737-11775867)
chr5 (217-346)||(13032064-13032192)
chr5 (217-330)||(4592746-4592858)
chr5 (219-346)||(34827140-34827266)
chr5 (232-345)||(3057156-3057269)
chr5 (232-337)||(8440981-8441086)
chr5 (263-345)||(36290593-36290675)
chr5 (232-339)||(32793334-32793441)
chr5 (240-299)||(1475686-1475745)
chr5 (275-339)||(43222129-43222193)
chr5 (217-346)||(43309063-43309182)
chr5 (276-345)||(29340999-29341068)
chr5 (237-339)||(3057381-3057483)
chr5 (150-201)||(13032187-13032238)
chr5 (150-201)||(37266800-37266851)
chr5 (150-201)||(40753117-40753168)
chr5 (266-345)||(41660100-41660179)
chr5 (279-345)||(27428883-27428949)
chr5 (243-315)||(28142807-28142881)
chr5 (151-201)||(35660565-35660615)
chr5 (280-345)||(40162737-40162803)
chr5 (232-339)||(14688534-14688641)
chr5 (151-201)||(18625377-18625427)
chr5 (263-339)||(11960597-11960674)
chr5 (275-345)||(3041309-3041380)
chr5 (154-201)||(11775862-11775909)
chr5 (276-339)||(31546490-31546553)
chr5 (262-337)||(35650308-35650383)
chr5 (275-345)||(2984392-2984462)
chr5 (280-345)||(8674999-8675069)
chr5 (151-201)||(32129573-32129623)
chr5 (275-339)||(9465746-9465810)
chr5 (232-313)||(10173908-10173985)
chr5 (275-339)||(18653364-18653428)
[»] chr6 (39 HSPs)
chr6 (217-346)||(4804393-4804522)
chr6 (217-346)||(7162029-7162158)
chr6 (205-346)||(12412570-12412711)
chr6 (219-346)||(21159370-21159497)
chr6 (217-346)||(17944107-17944236)
chr6 (217-329)||(1249164-1249276)
chr6 (217-329)||(29698108-29698220)
chr6 (237-339)||(27826503-27826605)
chr6 (247-346)||(13089750-13089849)
chr6 (24-150)||(1574582-1574702)
chr6 (232-345)||(227565-227679)
chr6 (263-345)||(24484870-24484952)
chr6 (217-291)||(32737819-32737893)
chr6 (207-298)||(1518327-1518417)
chr6 (232-298)||(1516238-1516304)
chr6 (259-345)||(2800613-2800699)
chr6 (263-345)||(7215854-7215936)
chr6 (232-283)||(30460780-30460831)
chr6 (263-345)||(2142295-2142377)
chr6 (280-345)||(7098197-7098263)
chr6 (280-345)||(7545645-7545711)
chr6 (151-201)||(32737926-32737976)
chr6 (149-201)||(4804517-4804569)
chr6 (275-345)||(13888524-13888595)
chr6 (151-201)||(13089705-13089755)
chr6 (152-201)||(1249105-1249154)
chr6 (276-345)||(17828570-17828639)
chr6 (263-339)||(11180436-11180512)
chr6 (310-346)||(32737895-32737931)
chr6 (275-310)||(2720376-2720411)
chr6 (232-267)||(17398774-17398809)
chr6 (150-201)||(17944231-17944282)
chr6 (150-201)||(21159324-21159375)
chr6 (275-338)||(32254040-32254103)
chr6 (163-201)||(12412706-12412744)
chr6 (308-337)||(20228514-20228543)
chr6 (308-337)||(22122498-22122527)
chr6 (262-298)||(1515573-1515609)
chr6 (275-339)||(12734413-12734476)
[»] chr1 (41 HSPs)
chr1 (217-346)||(12151712-12151841)
chr1 (232-346)||(50294064-50294178)
chr1 (217-346)||(50484331-50484460)
chr1 (217-333)||(12380924-12381040)
chr1 (217-333)||(12384991-12385107)
chr1 (239-346)||(23861953-23862064)
chr1 (221-339)||(40328225-40328344)
chr1 (232-346)||(48327155-48327269)
chr1 (237-339)||(24977205-24977307)
chr1 (219-293)||(7841764-7841838)
chr1 (263-345)||(52280041-52280123)
chr1 (263-345)||(39426201-39426283)
chr1 (263-339)||(26860058-26860134)
chr1 (217-298)||(45977967-45978048)
chr1 (213-337)||(32887790-32887914)
chr1 (275-338)||(24413291-24413354)
chr1 (263-345)||(30077646-30077728)
chr1 (280-345)||(6948832-6948899)
chr1 (149-201)||(12380831-12380883)
chr1 (149-201)||(12384898-12384950)
chr1 (259-315)||(46608409-46608465)
chr1 (232-287)||(45970806-45970861)
chr1 (280-345)||(18107323-18107389)
chr1 (263-345)||(46045678-46045760)
chr1 (151-201)||(50484455-50484505)
chr1 (232-293)||(2845226-2845287)
chr1 (253-345)||(18976306-18976398)
chr1 (217-310)||(23916033-23916124)
chr1 (277-346)||(32361308-32361377)
chr1 (232-327)||(44483728-44483822)
chr1 (287-346)||(7840680-7840739)
chr1 (232-327)||(7844948-7845043)
chr1 (239-321)||(7783206-7783288)
chr1 (237-325)||(5047403-5047490)
chr1 (150-201)||(48327109-48327160)
chr1 (150-201)||(50294018-50294069)
chr1 (151-201)||(12151836-12151886)
chr1 (151-201)||(23861908-23861958)
chr1 (159-201)||(40328344-40328386)
chr1 (308-346)||(45978041-45978079)
chr1 (232-280)||(40988675-40988723)
[»] chr4 (62 HSPs)
chr4 (232-346)||(19901919-19902033)
chr4 (217-346)||(3952171-3952300)
chr4 (217-346)||(5763163-5763292)
chr4 (237-339)||(34778386-34778488)
chr4 (217-339)||(38079728-38079850)
chr4 (232-346)||(56558239-56558353)
chr4 (217-346)||(23610587-23610716)
chr4 (239-339)||(18207048-18207148)
chr4 (239-339)||(30567868-30567968)
chr4 (232-339)||(33262560-33262667)
chr4 (217-315)||(12241440-12241538)
chr4 (217-346)||(5416467-5416597)
chr4 (232-339)||(39862477-39862584)
chr4 (217-346)||(33247131-33247258)
chr4 (232-346)||(24073577-24073690)
chr4 (237-337)||(47922085-47922185)
chr4 (217-298)||(12153116-12153197)
chr4 (251-346)||(12312476-12312572)
chr4 (275-345)||(56269078-56269148)
chr4 (263-345)||(56453822-56453904)
chr4 (232-321)||(31862246-31862335)
chr4 (259-345)||(47922368-47922455)
chr4 (263-345)||(5524438-5524520)
chr4 (263-345)||(37002253-37002335)
chr4 (232-331)||(25442190-25442290)
chr4 (269-345)||(36688190-36688266)
chr4 (217-299)||(52018728-52018807)
chr4 (276-339)||(23474115-23474178)
chr4 (263-345)||(42010108-42010190)
chr4 (280-345)||(55160372-55160438)
chr4 (232-345)||(1871238-1871350)
chr4 (217-290)||(17080697-17080770)
chr4 (148-201)||(56558348-56558401)
chr4 (280-345)||(25219003-25219070)
chr4 (280-339)||(46238974-46239034)
chr4 (263-339)||(48084533-48084609)
chr4 (151-201)||(12153223-12153273)
chr4 (151-201)||(12312431-12312481)
chr4 (280-345)||(17493010-17493076)
chr4 (280-345)||(32146510-32146576)
chr4 (151-201)||(33247086-33247136)
chr4 (280-345)||(53526096-53526162)
chr4 (237-289)||(43447638-43447691)
chr4 (275-339)||(1015862-1015926)
chr4 (151-198)||(18206996-18207043)
chr4 (152-199)||(34778492-34778539)
chr4 (262-337)||(42844197-42844272)
chr4 (151-201)||(3952126-3952176)
chr4 (151-201)||(5416422-5416472)
chr4 (237-279)||(12312571-12312613)
chr4 (151-201)||(19901874-19901924)
chr4 (151-201)||(52018832-52018882)
chr4 (275-339)||(34927488-34927553)
chr4 (275-337)||(26428971-26429034)
chr4 (308-346)||(12153190-12153228)
chr4 (151-201)||(23610711-23610761)
chr4 (151-201)||(33524331-33524381)
chr4 (239-293)||(33841858-33841912)
chr4 (149-201)||(5763116-5763168)
chr4 (280-312)||(17317215-17317247)
chr4 (163-199)||(30567972-30568008)
chr4 (275-339)||(38865280-38865344)
[»] chr2 (38 HSPs)
chr2 (217-346)||(35316770-35316899)
chr2 (232-346)||(13238641-13238755)
chr2 (217-339)||(28564836-28564959)
chr2 (240-346)||(23259488-23259594)
chr2 (262-345)||(30709100-30709183)
chr2 (217-298)||(39465720-39465801)
chr2 (263-345)||(374984-375066)
chr2 (24-150)||(10532582-10532702)
chr2 (263-345)||(23459848-23459930)
chr2 (237-298)||(374487-374548)
chr2 (217-286)||(41983401-41983469)
chr2 (262-345)||(2063343-2063427)
chr2 (259-339)||(21454503-21454582)
chr2 (275-345)||(8988858-8988928)
chr2 (280-345)||(13780506-13780572)
chr2 (280-339)||(40254157-40254217)
chr2 (22-150)||(10525765-10525881)
chr2 (151-201)||(35316894-35316944)
chr2 (237-298)||(45625111-45625172)
chr2 (263-339)||(4446904-4446980)
chr2 (275-338)||(19908783-19908846)
chr2 (150-201)||(23259442-23259493)
chr2 (263-345)||(29188644-29188727)
chr2 (262-345)||(36929706-36929789)
chr2 (280-345)||(3594865-3594931)
chr2 (280-345)||(41435205-41435271)
chr2 (151-201)||(45625035-45625085)
chr2 (232-277)||(2061337-2061382)
chr2 (232-285)||(12949430-12949482)
chr2 (275-339)||(30857686-30857750)
chr2 (262-317)||(10877693-10877748)
chr2 (154-201)||(13238750-13238797)
chr2 (263-310)||(30803311-30803358)
chr2 (275-337)||(373174-373236)
chr2 (280-314)||(6288050-6288084)
chr2 (276-345)||(15709772-15709841)
chr2 (151-183)||(28564979-28565011)
chr2 (275-335)||(41072961-41073021)
[»] scaffold0012 (2 HSPs)
scaffold0012 (217-346)||(208008-208137)
scaffold0012 (150-201)||(208132-208183)
[»] scaffold0250 (2 HSPs)
scaffold0250 (232-346)||(7107-7221)
scaffold0250 (151-184)||(7237-7270)
[»] scaffold0035 (2 HSPs)
scaffold0035 (217-346)||(16398-16527)
scaffold0035 (150-201)||(16352-16403)
[»] scaffold0009 (1 HSPs)
scaffold0009 (237-346)||(6436-6545)
[»] scaffold0456 (2 HSPs)
scaffold0456 (205-298)||(13629-13722)
scaffold0456 (151-201)||(13749-13799)
[»] scaffold0126 (1 HSPs)
scaffold0126 (237-339)||(22450-22552)
[»] scaffold0008 (2 HSPs)
scaffold0008 (232-346)||(9202-9313)
scaffold0008 (151-201)||(9157-9207)
[»] scaffold1067 (1 HSPs)
scaffold1067 (24-150)||(2334-2454)
[»] scaffold0171 (1 HSPs)
scaffold0171 (263-339)||(17314-17390)
[»] scaffold0664 (1 HSPs)
scaffold0664 (280-345)||(4702-4768)
[»] scaffold0006 (1 HSPs)
scaffold0006 (237-298)||(73889-73950)
[»] scaffold0062 (1 HSPs)
scaffold0062 (276-345)||(58684-58753)


Alignment Details
Target: chr3 (Bit Score: 140; Significance: 3e-73; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 22 - 198
Target Start/End: Original strand, 34373416 - 34373588
Alignment:
Q  22 gtgcattgatttttgactttgctttagtgttgttttcaaattagttgttgaaataaggttttattaaaagtatcttcctaaacacgcccgcccaatgctg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34373416 gtgcattgatttttgactttgctttagtgttgttttcaaattagttgttgaaataaggttttatgaaaagtatcttcctaaacacgcccgcccaatgctg 34373515  T
Q  122 aaattgtgatgatggttttatgtttgcaggggtgaacatcctctccatttggcaaaataaatatagttttgcaagtt 198  Q
    |||||||| |||||||||||||||||||||| |||| ||||||    |||||||||||||||| |||||||||||||    
T  34373516 aaattgtggtgatggttttatgtttgcagggctgaagatcctc----tttggcaaaataaatagagttttgcaagtt 34373588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 27033596 - 27033725
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27033596 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggatccacttagtggtaggacccacc 27033695  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    |||||||| |||||||||||||| ||||||    
T  27033696 atctatttcttgtgtctatctctctccaac 27033725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 34373791 - 34373905
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||    
T  34373791 tttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacctaattagtggtaggacccaccatctattttttgtgt 34373890  T
Q  332 ctatctctatccaac 346  Q
    |||||||| ||||||    
T  34373891 ctatctctctccaac 34373905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 2229928 - 2230057
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    |||| |||| |||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| | |||||||||||||||||||| |    
T  2229928 tctctatttctttaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtggaaaccacttagtggtaggacccatc 2230027  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||||||||||||| ||||||    
T  2230028 atctattttttgtgtctatctctctccaac 2230057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 217 - 341
Target Start/End: Complemental strand, 34373715 - 34373591
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  34373715 tctccatttcttcaatttggagagataaagagacaaaaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacc 34373616  T
Q  317 atctattttttgtgtctatctctat 341  Q
    |||||||||| ||||||||||||||    
T  34373615 atctatttttagtgtctatctctat 34373591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 217 - 346
Target Start/End: Complemental strand, 43720077 - 43719948
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| |||||||||||||||||||||||| |||||| | ||||||||||||||||||||||| |||||||||||||||||||||     
T  43720077 tctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaaataaaatataattaatgatggtgggacccacttagtggtaggacccaca 43719978  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    || |||||||||||||||||||| ||||||    
T  43719977 atttattttttgtgtctatctctctccaac 43719948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 237 - 346
Target Start/End: Original strand, 46167358 - 46167467
Alignment:
Q  237 agagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatc 336  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  46167358 agagataaagacaaatataatcttgaaaaaagtaaaatataattaataatggtaggatccacttagtggtaggacccaccatatattttttgtgtctatc 46167457  T
Q  337 tctatccaac 346  Q
    ||| ||||||    
T  46167458 tctctccaac 46167467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 219 - 335
Target Start/End: Complemental strand, 19830560 - 19830443
Alignment:
Q  219 tccatttatttagtttgaagagataaagacacataaaatcttgaaaaaag-tgaaatataattaatgatggtgggatccacttagtggtaggacccacca 317  Q
    ||||||| || | |||| |||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  19830560 tccatttcttcaatttggagagataaagacacataaaatctttaaaaaaggtaaaatataattaatgatggtgggacccacttaatggtaggacccacca 19830461  T
Q  318 tctattttttgtgtctat 335  Q
    ||||||||||||||||||    
T  19830460 tctattttttgtgtctat 19830443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 40851718 - 40851848
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataatt-aatgatggtgggatccacttagtggtaggacccac 315  Q
    ||||||||| || | |||| ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| ||| |||||||||||| | ||||||    
T  40851718 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatatgatttaatgatggtaggacccacttagtggttgaacccac 40851817  T
Q  316 catctattttttgtgtctatctctatccaac 346  Q
    |||||||||||||||||||||| | ||||||    
T  40851818 catctattttttgtgtctatctttctccaac 40851848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 232 - 339
Target Start/End: Original strand, 48084779 - 48084887
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctatt-ttttgtg 330  Q
    |||| ||||||| ||||||| ||||| ||||||||| | ||| ||||||||||||| ||||| |||||||||||| |||||||||||||||| |||||||    
T  48084779 tttggagagatatagacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtg 48084878  T
Q  331 tctatctct 339  Q
    |||||||||    
T  48084879 tctatctct 48084887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 12402925 - 12403040
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaa-gtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtg 330  Q
    |||| |||||||||||||||||||||||| |||||| || ||||||||||||| |||||||||  ||||||||||||| | |||||||||| ||||| |     
T  12402925 tttggagagataaagacacataaaatcttaaaaaaaagtaaaatataattaataatggtgggactcacttagtggtagaatccaccatctaatttttata 12403024  T
Q  331 tctatctctatccaac 346  Q
    ||||||||| ||||||    
T  12403025 tctatctctctccaac 12403040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 329
Target Start/End: Complemental strand, 550931 - 550834
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgt 329  Q
    |||| ||||||||||| ||||||||| || |||||||| |||||||| |||| ||||||||| ||||||| || ||||| ||||||||||||||||||    
T  550931 tttggagagataaagatacataaaatttttaaaaaagtaaaatataaataataatggtgggacccacttaatgataggatccaccatctattttttgt 550834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 31523752 - 31523670
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| ||||||||||||||||||| |||||||||  ||||||||||||  |||||||||||||||||||| |||||    
T  31523752 aaaaagtaaaaaataattaatgatggtgggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaa 31523670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 42613071 - 42613147
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||  |||||||| |||||||||||    
T  42613071 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccaccacttattttttttgtctatctct 42613147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 49679354 - 49679272
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| ||||||||||||||||||| ||| |||||| |||||||| |||  |||||||||||||||||||| |||||    
T  49679354 aaaaagtaaaaaataattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaa 49679272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 345
Target Start/End: Complemental strand, 566888 - 566775
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtg 330  Q
    |||| ||||||||| | |||||||||||||| |||||| |||||||| |||| | ||||||| ||||||| || ||||| || |||| || ||||||||     
T  566888 tttggagagataaaaatacataaaatcttga-aaaagtaaaatataaataataaaggtgggacccacttaatgataggatccgccatatatttttttgta 566790  T
Q  331 tctatctctatccaa 345  Q
    ||||||||| |||||    
T  566789 tctatctctctccaa 566775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 2230102 - 2230052
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  2230102 gggtgaacatcctctccatttggcaaaataattggagttttgcaagttgga 2230052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 346
Target Start/End: Original strand, 24754673 - 24754731
Alignment:
Q  288 gtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaac 346  Q
    |||||| |||||||||||||||||  |||||||||||| ||||||||||||| ||||||    
T  24754673 gtgggacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaac 24754731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 346
Target Start/End: Original strand, 24763670 - 24763728
Alignment:
Q  288 gtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaac 346  Q
    |||||| |||||||||||||||||  |||||||||||| ||||||||||||| ||||||    
T  24763670 gtgggacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaac 24763728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 19830387 - 19830436
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgg 200  Q
    ||||||| |||||||||||||||||||||||||  |||||||||||||||    
T  19830387 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgg 19830436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 345
Target Start/End: Complemental strand, 40810441 - 40810357
Alignment:
Q  262 aaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctatt-ttttgtgtctatctctatccaa 345  Q
    |||||| | ||| ||||||||||||| ||||| ||||||||||||  ||||||||||||||| |||| ||| ||||||| |||||    
T  40810441 aaaaaaataaaaaataattaatgatgatgggacccacttagtggttagacccaccatctattcttttttgtttatctctctccaa 40810357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 24647957 - 24647907
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||| ||||||||||  ||||||||||||||||    
T  24647957 gggtgaagatcctctccatttgacaaaataaatggagttttgcaagttgga 24647907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 24754776 - 24754726
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||  |||||| |||||||||    
T  24754776 gggtgaagatcctctccatttggcaaaataaatggagttttacaagttgga 24754726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 24763773 - 24763723
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||  |||||| |||||||||    
T  24763773 gggtgaagatcctctccatttggcaaaataaatggagttttacaagttgga 24763723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 1995435 - 1995511
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||| ||| |||||||||||||||| ||  |||||| ||||||||| ||  ||||||||| | |||||||||||    
T  1995435 aaaaagtaaaaaataattaatgatggtgagactcacttattggtaggactcattatctattttctatgtctatctct 1995511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 46167509 - 46167462
Alignment:
Q  154 tgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||||||||||||| |||||||||||  ||||||| ||||||||    
T  46167509 tgaacatcctctccatttagcaaaataaatggagttttgtaagttgga 46167462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 34373950 - 34373900
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| || ||||||||||||||||||||||   |||||||||||||||    
T  34373950 gggtgaagattctctccatttggcaaaataaattgtgttttgcaagttgga 34373900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 43719903 - 43719953
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||  ||||||||||  ||||||||||||||||    
T  43719903 gggtgaagatcctctccatttaacaaaataaatggagttttgcaagttgga 43719953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 52859496 - 52859434
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaa-agtgaaatataattaatgatggtggga 293  Q
    |||| ||| ||||| |||||||||||||| ||||| ||| |||||||||||||||| ||||||    
T  52859496 tttggagaaataaatacacataaaatcttaaaaaagagtaaaatataattaatgattgtggga 52859434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 29586340 - 29586409
Alignment:
Q  276 taattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||||||||||| || ||||||| | ||| |||  || ||||||||| ||||||||||||| |||||    
T  29586340 taattaatgatggtgagacccacttaatagtaagacttactatctattttatgtgtctatctctctccaa 29586409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 33632827 - 33632895
Alignment:
Q  276 taattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    |||||||||||| ||| ||||| ||| | |||||| |||| ||||||||| ||||||||||||| |||||    
T  33632827 taattaatgatg-tggaatccatttaatagtaggatccactatctattttatgtgtctatctctctccaa 33632895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 40851891 - 40851843
Alignment:
Q  153 gtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||| |||||||| ||||| ||||||||||  ||||||||||||||||    
T  40851891 gtgaagatcctctcaatttgacaaaataaatggagttttgcaagttgga 40851843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 1e-50; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 217 - 346
Target Start/End: Complemental strand, 25084858 - 25084729
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||    
T  25084858 tctccatttttttaatttgaagagataaagacacataaaattttgaaaaaaataaaatataattaatgatggtgggacccacttagtggtaggacccacc 25084759  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||||||||||||| ||||||    
T  25084758 atctattttttgtgtctatctctctccaac 25084729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 9559169 - 9559055
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  9559169 tttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtat 9559070  T
Q  332 ctatctctatccaac 346  Q
    |||||||| ||||||    
T  9559069 ctatctctctccaac 9559055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 21151097 - 21151226
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || ||    
T  21151097 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggatcctcc 21151196  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    |||||||| |||||||||||||| ||||||    
T  21151197 atctatttcttgtgtctatctctctccaac 21151226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 217 - 346
Target Start/End: Complemental strand, 45260557 - 45260428
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| |||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||| ||||     
T  45260557 tctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgatgggatccacttagtggtaggatccaca 45260458  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||||||||||||| ||||||    
T  45260457 atctattttttgtgtctatctctctccaac 45260428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 217 - 345
Target Start/End: Original strand, 7362513 - 7362641
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||| ||||||||| ||||||||    
T  7362513 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaacccatttagtggtacgacccacc 7362612  T
Q  317 atctattttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||||| |||||    
T  7362613 atctattttttgtgtctatctctctccaa 7362641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 4888427 - 4888541
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| |||||||||||||||||||||||| |||||  | ||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||    
T  4888427 tttggagagataaagacacataaaatcttaaaaaacataaaatataattaatgatggtgggacctacttagtggtaggacccactatctattttttgtgt 4888526  T
Q  332 ctatctctatccaac 346  Q
    |||||||| ||||||    
T  4888527 ctatctctctccaac 4888541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 16366463 - 16366592
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||| |||||    
T  16366463 tctccatttcttcaatttggagagataaaaacacgtaaaatcttgaaaaaagtaaaatataattaatgatggtgggacacacttagtggtaggatccacc 16366562  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    |||||||| || ||||||||||| ||||||    
T  16366563 atctatttcttatgtctatctctctccaac 16366592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 12139273 - 12139401
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatcc-acttagtggtaggacccac 315  Q
    ||||||||| || | |||| |||||||||  ||||||||||||| |||||||| ||||||||||||||||||||||| || ||||| |||||||||||||    
T  12139273 tctccatttcttcaatttggagagataaa--cacataaaatcttaaaaaaagtaaaatataattaatgatggtgggaccccacttaatggtaggacccac 12139370  T
Q  316 catctattttttgtgtctatctctatccaac 346  Q
    |||||||||||||||||||||||| ||||||    
T  12139371 catctattttttgtgtctatctctctccaac 12139401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 44647928 - 44648038
Alignment:
Q  238 gagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgg--gatccacttagtggtaggacccaccatctattttttgtgtctat 335  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| ||  || |||||||||||| ||| ||||||||||||||||||||||||    
T  44647928 gagataaagacacataaaatcttgaaaaatgtaaaatataattaatgatggagggagacccacttagtggtcggatccaccatctattttttgtgtctat 44648027  T
Q  336 ctctatccaac 346  Q
    |||| ||||||    
T  44648028 ctctctccaac 44648038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 217 - 335
Target Start/End: Original strand, 18198201 - 18198319
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| |||||||||  |||||||||||||||||||| | |||||||||||||||||||||||  |||||||||| || |||||||    
T  18198201 tctccatttcttcaatttgtagagataaaatcacataaaatcttgaaaaaaataaaatataattaatgatggtgggactcacttagtggcagaacccacc 18198300  T
Q  317 atctattttttgtgtctat 335  Q
    |||||||||||||||||||    
T  18198301 atctattttttgtgtctat 18198319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 15741674 - 15741794
Alignment:
Q  24 gcattgatttttgactttgctttagtgttgttttcaaattagttgttgaaataaggttttattaaaagtatcttcctaaacacgcccgcccaatgctgaa 123  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||| |||||||||||||| || |||||||||||||||||||| |||    |||||||||    
T  15741674 gcattgaattttgactttgctttagtgtt-ttttgaaattagttattgaaataaggttt-atgaaaagtatcttcctaaacacaccc----aatgctgaa 15741767  T
Q  124 attgtgatgatggttttatgtttgcag 150  Q
    ||| || ||||||||||||||||||||    
T  15741768 attctggtgatggttttatgtttgcag 15741794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 47226188 - 47226077
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||  ||||||||||||    
T  47226188 tttggagagataaa-acacataaaatcttggaaaaagtaaaatataattaatgatggtgggacccatttagtggtgggacccacca--tattttttgtgt 47226092  T
Q  332 ctatctctatccaac 346  Q
     ||||||| ||||||    
T  47226091 ttatctctctccaac 47226077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 247 - 345
Target Start/End: Complemental strand, 39855913 - 39855815
Alignment:
Q  247 acacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    |||| |||||||||||||||||| |||| |||||||||||| ||||| |||||||||||||||||| ||||||| |||| ||||||||||||| |||||    
T  39855913 acacttaaaatcttgaaaaaagtaaaatttaattaatgatgatgggacccacttagtggtaggaccgaccatcttttttatgtgtctatctctctccaa 39855815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 237 - 345
Target Start/End: Complemental strand, 47500393 - 47500284
Alignment:
Q  237 agagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctatt-ttttgtgtctat 335  Q
    ||||||| ||||||| ||||| ||||||||| | ||| ||||||||||||| ||||| |||||||||||| |||||||||||||||| ||||||||||||    
T  47500393 agagatatagacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctat 47500294  T
Q  336 ctctatccaa 345  Q
    |||| |||||    
T  47500293 ctctctccaa 47500284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 217 - 339
Target Start/End: Original strand, 29630993 - 29631115
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| |||  |||| ||| ||||||||||||||||| ||||||||||| ||  |||||||||||| |||||| | || ||||||| ||||||||     
T  29630993 tctccatttctttcatttggagatataaagacacataaaattttgaaaaaagtaaagaataattaatgatagtgggacctacatagtggttggacccact 29631092  T
Q  317 atctattttttgtgtctatctct 339  Q
    |||||| ||||||||||||||||    
T  29631093 atctatgttttgtgtctatctct 29631115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 232 - 345
Target Start/End: Original strand, 33450466 - 33450580
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctatt-ttttgtg 330  Q
    |||| ||||||| | ||||| ||||| ||||||||| | ||| ||||||||||||| ||||| |||||||||||| |||||||||||||||| |||||||    
T  33450466 tttggagagatataaacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtg 33450565  T
Q  331 tctatctctatccaa 345  Q
    ||||||||| |||||    
T  33450566 tctatctctctccaa 33450580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 47799984 - 47799902
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| ||||||||||||||||||| |||||||||| ||||||||| ||  |||||||||||||||||||| |||||    
T  47799984 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaa 47799902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 339
Target Start/End: Original strand, 32915919 - 32916023
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||||||||| ||||  || ||||||   |||||||||| ||||||||||||  |||||| ||||||||||||| || ||||||||||||    
T  32915919 tttggagagataaagacacaaaaaagttttaaaaaa---aaatataattcatgatggtgggactcacttaatggtaggacccactatttattttttgtgt 32916015  T
Q  332 ctatctct 339  Q
    ||||||||    
T  32916016 ctatctct 32916023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 19027751 - 19027685
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||| |||||    
T  19027751 taatgatggtgggatccacttagtgataggacccaccatttatttttttgtgtctatctctctccaa 19027685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 20726885 - 20726951
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||| |||||    
T  20726885 taatgatggtgggatccacttagtgataggacccaccatttatttttttgtgtctatctctctccaa 20726951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 30588526 - 30588602
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||| ||| ||||||||||||||||||| |||||||||| ||||||||  ||  ||||||||||||||||||||    
T  30588526 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccgtcacttattttttgtgtctatctct 30588602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 46802403 - 46802339
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    |||||||| | |||||||| |||||||||||||||||||||| |||||||||| |||||||||||    
T  46802403 ataattaacggtggtgggacccacttagtggtaggacccaccgtctattttttatgtctatctct 46802339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 989132 - 989202
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||||| ||||| ||| | ||||||||||||||||||| || |||||||||||||||||||| |||||    
T  989132 ataattaattatggttggacctacttagtggtaggacccactatatattttttgtgtctatctctctccaa 989202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 14696825 - 14696759
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||||||| ||||||||||||  || |||||||||||||||||| |||||    
T  14696825 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaa 14696759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 19889118 - 19889042
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||| ||| ||||||||||||||||| | |||||||||| |||||||||| |  |||||||||| |||||||||    
T  19889118 aaaaagtaaaaaataattaatgatggtggaacccacttagtgataggacccacaacttattttttgtatctatctct 19889042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 32916172 - 32916236
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||||||||||||| ||||||||||||||| ||||||| | |||||||| |||| |||||||    
T  32916172 ataattaatgatggtggaatccacttagtggtatgacccacaacctatttttcgtgtgtatctct 32916236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 21151271 - 21151221
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  21151271 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgga 21151221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 30102501 - 30102567
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||||||| ||||||||||||  || |||||| ||||||||||| |||||    
T  30102501 taatgatggtgggatccacttagtgataggacccaccacttatttttttttgtctatctctctccaa 30102567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 345
Target Start/End: Complemental strand, 34986045 - 34985947
Alignment:
Q  249 acataaaatcttgaaaaaag-tgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctatt-ttttgtgtctatctctatccaa 345  Q
    ||||||||| |||||||||  | ||| ||||||||||||| |||||  || ||||||||  ||||||||||||||| |||||||||||||||| |||||    
T  34986045 acataaaattttgaaaaaaaataaaaaataattaatgatgatgggactcatttagtggtttgacccaccatctattcttttgtgtctatctctctccaa 34985947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 45260384 - 45260433
Alignment:
Q  152 ggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  45260384 ggtgaagatcctctccatttggcaaaataaattgagttttgcaagttgga 45260433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 18198377 - 18198325
Alignment:
Q  149 aggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||||| |||||||||||||||||||||||||  |||||||||| |||||    
T  18198377 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaaattgga 18198325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 4269187 - 4269234
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatctatttttt 327  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  4269187 taatgatggtgggatccacttagtgataggacccaccacttatttttt 4269234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 16366638 - 16366587
Alignment:
Q  150 ggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||| |||||||||||||| ||||||||||  ||||||||||||||||    
T  16366638 ggggtgaagatcctctccatttgacaaaataaatggagttttgcaagttgga 16366587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 44648084 - 44648033
Alignment:
Q  150 ggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||| |||||||||||||| ||||||||||  ||||||||||||||||    
T  44648084 ggggtgaagatcctctccatttgacaaaataaatggagttttgcaagttgga 44648033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 47226035 - 47226082
Alignment:
Q  154 tgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||||    
T  47226035 tgaagatcctctccatttggcaaaataaatggagttttgcaagttgga 47226082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 9559010 - 9559060
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||  || |||||||||||||    
T  9559010 gggtgaagatcctctccatttggcaaaataaatggagatttgcaagttgga 9559060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 28528554 - 28528624
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    |||||||||||||||||||| | ||||||| |||||| |||||  | |||||| ||||||||||| |||||    
T  28528554 ataattaatgatggtgggattcgcttagtgataggactcaccacttgttttttttgtctatctctctccaa 28528624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 40019641 - 40019702
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtggga 293  Q
    |||| ||||||||| ||||| |||||||||||||||||  ||  ||||||||||||||||||    
T  40019641 tttggagagataaaaacacaaaaaatcttgaaaaaagtataaagtaattaatgatggtggga 40019702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 12139448 - 12139396
Alignment:
Q  149 aggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||||| || |||| |||||||||||||||||  ||||||||||||||||    
T  12139448 aggggtgaagattctcttcatttggcaaaataaatgaagttttgcaagttgga 12139396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 29844316 - 29844364
Alignment:
Q  297 acttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    |||||||||||| |||||| ||||||||| ||||||||||||| |||||    
T  29844316 acttagtggtagaacccactatctattttatgtgtctatctctctccaa 29844364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 4888587 - 4888536
Alignment:
Q  150 ggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||| |||||||||||||| ||||||||||  || |||||||||||||    
T  4888587 ggggtgaagatcctctccatttgacaaaataaatggagatttgcaagttgga 4888536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 35737128 - 35737186
Alignment:
Q  287 ggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| |||| ||||| | ||||||||||  |||||||||||||||||||| |||||    
T  35737128 ggtgggacccacctagtgatgggacccaccacttattttttgtgtctatctctctccaa 35737186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 47080433 - 47080502
Alignment:
Q  277 aattaatgatggtgggatccacttagtggtaggacccacca-tctattttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||| || ||||||| ||||||||| || |   |||||||||||||||||| |||||    
T  47080433 aattaatgatggtgggacccgcttagtgataggacccatcacttgtttttttgtgtctatctctctccaa 47080502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 7373872 - 7373940
Alignment:
Q  277 aattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    |||||||||| |||||||| ||||| | ||| |||||||  ||||||||||||  |||||||| |||||    
T  7373872 aattaatgatagtgggatctacttaatagtaagacccactgtctattttttgtacctatctctctccaa 7373940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 219 - 346
Target Start/End: Complemental strand, 30426797 - 30426670
Alignment:
Q  219 tccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccat 318  Q
    ||||||| || | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30426797 tccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccat 30426698  T
Q  319 ctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||||||||||| ||||||    
T  30426697 ctattttttgtgtctatctctctccaac 30426670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 28069679 - 28069793
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28069679 tttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgt 28069778  T
Q  332 ctatctctatccaac 346  Q
    || ||||| ||||||    
T  28069779 ctttctctctccaac 28069793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 36991301 - 36991430
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |    
T  36991301 tctccatttcttcaatttggagagataaagacacgtaaaatcttgaaaaaagtcaaatataattaatgatggtgggacccacttagtggtaggacccatc 36991400  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    |||||||| || ||||||||||| ||||||    
T  36991401 atctatttcttatgtctatctctctccaac 36991430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 222 - 339
Target Start/End: Original strand, 24101966 - 24102083
Alignment:
Q  222 atttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatcta 321  Q
    |||| |||| |||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |  ||||||||||||||| ||||||||||    
T  24101966 atttttttaatttggagagataaagacacgtaaaatcttgaaaaaaatgaaatataattaatgatggtggaactcacttagtggtaggatccaccatcta 24102065  T
Q  322 ttttttgtgtctatctct 339  Q
    |||||| |||||||||||    
T  24102066 ttttttatgtctatctct 24102083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 219 - 346
Target Start/End: Complemental strand, 40695375 - 40695248
Alignment:
Q  219 tccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccat 318  Q
    ||||||| || | |||| || |||||||| ||||||||||||||||||||| |||||||| |||||||||||| |  ||||||||||||||||| |||||    
T  40695375 tccatttcttcaatttggagggataaagaaacataaaatcttgaaaaaagtaaaatataactaatgatggtggaactcacttagtggtaggacctaccat 40695276  T
Q  319 ctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||||||||||| ||||||    
T  40695275 ctattttttgtgtctatctctctccaac 40695248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 219 - 346
Target Start/End: Original strand, 41511209 - 41511336
Alignment:
Q  219 tccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccat 318  Q
    ||||||| || | |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| |||||||||| ||    
T  41511209 tccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaaaccacttagtgataggacccactat 41511308  T
Q  319 ctattttttgtgtctatctctatccaac 346  Q
    ||||||||| | ||||||||| ||||||    
T  41511309 ctattttttatatctatctctttccaac 41511336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 221 - 339
Target Start/End: Complemental strand, 10672638 - 10672520
Alignment:
Q  221 catttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatct 320  Q
    |||||||| | |||| ||||||||| | ||||||||| || ||||  || |||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  10672638 catttattcaatttggagagataaaaatacataaaattttaaaaagggtaaaatataattaatgatggtgggactcacttagtggtaggatccaccatct 10672539  T
Q  321 attttttgtgtctatctct 339  Q
    |||||||||||||||||||    
T  10672538 attttttgtgtctatctct 10672520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 217 - 326
Target Start/End: Complemental strand, 28319032 - 28318923
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||| ||||||||||||||| || |||||||| ||||||||||||||||||| ||| |||||||||||||||||||||     
T  28319032 tctccatttcttcaatttggagagacaaagacacataaaattttaaaaaaagtaaaatataattaatgatggttggacccacttagtggtaggacccact 28318933  T
Q  317 atctattttt 326  Q
    |||| |||||    
T  28318932 atcttttttt 28318923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 232 - 345
Target Start/End: Original strand, 45113230 - 45113344
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctatt-ttttgtg 330  Q
    |||| ||||||| ||||||||||||| ||||||||| | ||| ||||||||||||| |||||  ||||||||||| |||||||||||||||| |||||||    
T  45113230 tttggagagatatagacacataaaattttgaaaaaaataaaaaataattaatgatgatgggacacacttagtggttggacccaccatctattcttttgtg 45113329  T
Q  331 tctatctctatccaa 345  Q
    ||||| ||| |||||    
T  45113330 tctatgtctctccaa 45113344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 227 - 326
Target Start/End: Complemental strand, 44859287 - 44859188
Alignment:
Q  227 tttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttt 326  Q
    |||| |||| |||||||||||||| | |||| ||  ||||| | ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  44859287 tttaatttggagagataaagacacgtgaaattttttaaaaaataaaatataattaatgatggtgggacccacttagtggtagaacccaccatctattttt 44859188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 10652733 - 10652618
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaa-gtgaaa-tataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgt 329  Q
    |||| ||||||||| ||||||||||| ||||||||| || ||| |||||||||||||||||||| ||| ||||| ||| ||||||||||| |||||||||    
T  10652733 tttggagagataaa-acacataaaattttgaaaaaaagtaaaaatataattaatgatggtgggacccaattagtagtatgacccaccatcaattttttgt 10652635  T
Q  330 gtctatctctatccaac 346  Q
     ||||||||| ||||||    
T  10652634 atctatctctctccaac 10652618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 8412219 - 8412294
Alignment:
Q  237 agagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacc 312  Q
    ||||||||| ||||||||||| ||||||||||| |||||||||||| ||||||| |||| ||||||||||||||||    
T  8412219 agagataaatacacataaaatattgaaaaaagtaaaatataattaacgatggtgagatctacttagtggtaggacc 8412294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 26749632 - 26749550
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| ||||||||||||||||||| |||||||||| ||||||||| ||  |||||||||||||||||||| |||||    
T  26749632 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaa 26749550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 217 - 339
Target Start/End: Complemental strand, 37966572 - 37966451
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| |||  |||| ||||||||||| ||||||||  || |||||||| |||||||||||||| |  |||| | || |||||||||||||| ||     
T  37966572 tctccatttcttttatttggagagataaagatacataaaaatttaaaaaaagtaaaatataattaatggtattggg-ttcaattagtggtaggacctaca 37966474  T
Q  317 atctattttttgtgtctatctct 339  Q
    ||||||||||||||| |||||||    
T  37966473 atctattttttgtgtttatctct 37966451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 339
Target Start/End: Original strand, 6399914 - 6399991
Alignment:
Q  262 aaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    |||||||| ||| ||||||||||||  |||||||||||| ||  || |||||||||||||||||||||||||||||||    
T  6399914 aaaaaagtaaaaaataattaatgataatgggatccacttggtaataagacccaccatctattttttgtgtctatctct 6399991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 34612567 - 34612631
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    |||||||||||||||| || |||||||||| ||||||||||||  ||||||||||||||||||||    
T  34612567 ataattaatgatggtgagacccacttagtgataggacccaccacttattttttgtgtctatctct 34612631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 5033108 - 5033150
Alignment:
Q  296 cacttagtggtaggacccaccatctattttttgtgtctatctc 338  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5033108 cacttagtggtaggacccaccatctattttttgtgtctatctc 5033150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 17867727 - 17867661
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||||||| ||||||||||||  || |||||||||||||||||| |||||    
T  17867727 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaa 17867661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 217 - 298
Target Start/End: Complemental strand, 12177694 - 12177613
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccac 298  Q
    ||||||||| || | ||| ||||||||| ||||  |||||||||||||||| | |||||||| |||||||||||||||||||    
T  12177694 tctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaataaaatataactaatgatggtgggatccac 12177613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 217 - 298
Target Start/End: Complemental strand, 12422122 - 12422041
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccac 298  Q
    ||||||||| || | ||| ||||||||| ||||  |||||||||||||||| | |||||||| |||||||||||||||||||    
T  12422122 tctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaataaaatataactaatgatggtgggatccac 12422041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 36748602 - 36748502
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||||||||| | || |||||||||     || ||||||||||||||||||||||||||| ||||||||||| |  |||| |||||||||    
T  36748602 tttggagagataaagacacagagaagcttgaaaaa----taaaataattaatgatggtgggatccacttaatggtaggacccgctgtcta-tttttgtgt 36748508  T
Q  332 ctatct 337  Q
    ||||||    
T  36748507 ctatct 36748502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 1937239 - 1937156
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacca-tctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| ||||||||||||||||||| || ||||||| |||||||||||| |   |||||||||||||||||| |||||    
T  1937239 aaaaagtaaaaaataattaatgatggtgggacccgcttagtgataggacccaccacttgtttttttgtgtctatctctctccaa 1937156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 6014154 - 6014260
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctatt-ttttgtg 330  Q
    |||| |||| || ||||||| ||| | || |||||||| ||| ||||||||||||  | ||||||||||| |||||||||| | |||||||| |||||||    
T  6014154 tttggagaggtatagacacacaaagttttcaaaaaagtaaaacataattaatgataataggatccacttaatggtaggacctatcatctattcttttgtg 6014253  T
Q  331 tctatct 337  Q
    |||||||    
T  6014254 tctatct 6014260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 27490121 - 27490067
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgat 286  Q
    |||||||||| ||| | ||||||||||||||||||||| ||||||||||||||||    
T  27490121 tttgaagagacaaaaatacataaaatcttgaaaaaagtaaaatataattaatgat 27490067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 36991475 - 36991425
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  36991475 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgga 36991425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 5033373 - 5033321
Alignment:
Q  149 aggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||||| ||||| |||||||||||||||||||  ||||||||||||||||    
T  5033373 aggggtgaagatcctttccatttggcaaaataaatggagttttgcaagttgga 5033321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 30796269 - 30796344
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||| ||| ||||||||||||||||||| |||||||||| || ||||| |||| ||||||| | ||||||||||    
T  30796269 aaaaagtaaaaaataattaatgatggtgggacccacttagtgata-gacccgccatttatttttagcgtctatctct 30796344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 42761716 - 42761780
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||||||||| ||| | ||||| |||||||||| |||| ||||||||| |||||||||||||    
T  42761716 ataattaatgatgatggaacccactgagtggtaggatccactatctattttatgtgtctatctct 42761780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 28069839 - 28069788
Alignment:
Q  150 ggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||| |||||||||||||||||||||||||  || |||||||||||||    
T  28069839 ggggtgaagatcctctccatttggcaaaataaatggagatttgcaagttgga 28069788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 10672470 - 10672520
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| || ||||||||||||||||||||||  ||||||||||||||||    
T  10672470 gggtgaagattctctccatttggcaaaataaatggagttttgcaagttgga 10672520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 10652571 - 10652623
Alignment:
Q  149 aggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||||| ||||||||||||||| |||||||||   |||||||||||||||    
T  10652571 aggggtgaagatcctctccatttggtaaaataaatggtgttttgcaagttgga 10652623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 11090509 - 11090556
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatctatttttt 327  Q
    |||||||||||||||||||||| || ||||||||||||  ||||||||    
T  11090509 taatgatggtgggatccacttaatgataggacccaccacttatttttt 11090556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 30904969 - 30905016
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatctatttttt 327  Q
    ||||||||||||||||||||||||  ||||||||||||  ||||||||    
T  30904969 taatgatggtgggatccacttagtaataggacccaccacttatttttt 30905016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 30426625 - 30426675
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| | |||||||||||||||||||||||   |||||||||||||||    
T  30426625 gggtgaagaccctctccatttggcaaaataaatggtgttttgcaagttgga 30426675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 3763592 - 3763535
Alignment:
Q  277 aattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtcta 334  Q
    ||||||||| ||||| | ||||||| ||||||||||||||| || |||||| ||||||    
T  3763592 aattaatgacggtggaacccacttaatggtaggacccaccaccttttttttttgtcta 3763535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 18689495 - 18689564
Alignment:
Q  276 taattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    |||||||||||| ||| | ||||||| |||||||| |||| ||||||||| | ||| ||||||| |||||    
T  18689495 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaa 18689564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 28403228 - 28403164
Alignment:
Q  271 aaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctat 335  Q
    ||||||| ||||||| | || ||||||||||||| | ||| || ||| |||||||||||||||||    
T  28403228 aaatatatttaatgaagatgagatccacttagtgttgggatccgccacctattttttgtgtctat 28403164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 8e-49; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 35660724 - 35660610
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35660724 tttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgt 35660625  T
Q  332 ctatctctatccaac 346  Q
    |||||||| ||||||    
T  35660624 ctatctctctccaac 35660610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 217 - 346
Target Start/End: Complemental strand, 4895865 - 4895736
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  4895865 tctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacc 4895766  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||||||||||||| ||||||    
T  4895765 atctattttttgtgtctatctctctccaac 4895736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 217 - 346
Target Start/End: Complemental strand, 32129747 - 32129618
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  32129747 tctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacc 32129648  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    |||||||||| |||||||||||| ||||||    
T  32129647 atctatttttggtgtctatctctctccaac 32129618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 219 - 346
Target Start/End: Original strand, 37266678 - 37266805
Alignment:
Q  219 tccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccat 318  Q
    ||||||| || | |||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  37266678 tccatttcttcaatttggagagataaagacacataaaatcttgaaaaaactaaaatataattaatgatggtgggacccacttagtggtatgacccaccat 37266777  T
Q  319 ctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||||||||||| ||||||    
T  37266778 ctattttttgtgtctatctctctccaac 37266805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 18625536 - 18625422
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18625536 tttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgt 18625437  T
Q  332 ctatctctatccaac 346  Q
    || ||||| ||||||    
T  18625436 ctttctctctccaac 18625422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 14349749 - 14349877
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| |||| |||| | ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  14349749 tctccatttctttaatttggaaagataaagacacataaa-tcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacc 14349847  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||||||| ||||| ||||||    
T  14349848 atctattttttgtgtctgtctctctccaac 14349877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 217 - 346
Target Start/End: Complemental strand, 40753292 - 40753163
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| |||| |||| |||||||||  |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  40753292 tctccatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacc 40753193  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    || |||||||||||||||||| | ||||||    
T  40753192 atatattttttgtgtctatctttctccaac 40753163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 39902360 - 39902489
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  39902360 tctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatggtggaatccatttagtggtaggacccacc 39902459  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    |||||||| |||||| ||||||| ||||||    
T  39902460 atctatttcttgtgtttatctctctccaac 39902489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 11775737 - 11775867
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaa-gtgaaatataattaatgatggtgggatccacttagtggtaggacccac 315  Q
    ||||||||| || | |||| ||||||||| ||||||||||||||||||||| || ||||||||||||||| ||||||| |||||||||||||||| ||||    
T  11775737 tctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaaagtaaaatataattaatgacggtgggacccacttagtggtaggatccac 11775836  T
Q  316 catctattttttgtgtctatctctatccaac 346  Q
    |||||||||||||||||||||||| ||||||    
T  11775837 catctattttttgtgtctatctctctccaac 11775867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 13032064 - 13032192
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| |||||||||||||||||||||||| |||||| | ||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  13032064 tctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaa-taaaatataattaatgatggtgggacccatttagtggtaggactcacc 13032162  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    |||||||| |||||||||||||| ||||||    
T  13032163 atctatttcttgtgtctatctctctccaac 13032192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 217 - 330
Target Start/End: Original strand, 4592746 - 4592858
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||  ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  4592746 tctccatttcttcaatttggagagataat-acacataaaatattgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaagacccacc 4592844  T
Q  317 atctattttttgtg 330  Q
    ||||||||||||||    
T  4592845 atctattttttgtg 4592858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 346
Target Start/End: Original strand, 34827140 - 34827266
Alignment:
Q  219 tccatttatttagtttgaagagataaagacacataaaatcttgaaaaaa-gtgaaatataattaatgatggtgggatccacttagtggtaggacccacca 317  Q
    ||||||| || | ||||||||||||||||||||  |||| ||||||||| || |||||||||||| |||||||||| |||||||||||||||| ||||||    
T  34827140 tccatttcttaaatttgaagagataaagacaca--aaattttgaaaaaaagtaaaatataattaaagatggtgggacccacttagtggtaggatccacca 34827237  T
Q  318 tctattttttgtgtctatctctatccaac 346  Q
    |||||||||| ||||||||||| ||||||    
T  34827238 tctattttttttgtctatctctctccaac 34827266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 345
Target Start/End: Complemental strand, 3057269 - 3057156
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    ||||||||||||||||||| |||| | || |||||||| ||||||||||||||||  || ||  |||||| |||||||| ||||||||||||||||||||    
T  3057269 tttgaagagataaagacacttaaattttttaaaaaagtaaaatataattaatgattatgtgactcacttaatggtaggatccaccatctattttttgtgt 3057170  T
Q  332 ctatctctatccaa 345  Q
     |||||||||||||    
T  3057169 ttatctctatccaa 3057156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 8441086 - 8440981
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||| ||||||| |||||| |||||||| |||||||||||||||||||||||  |||||||||||| | | |||||||||||||| ||||    
T  8441086 tttggagagataaatacacatacaatcttaaaaaaagtaaaatataattaatgatggtgggacacacttagtggtatgtcgcaccatctatttttggtgt 8440987  T
Q  332 ctatct 337  Q
    ||||||    
T  8440986 ctatct 8440981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 263 - 345
Target Start/End: Original strand, 36290593 - 36290675
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||| |||||    
T  36290593 aaaaagtaaaaaataattaatgatggtgggatccacttagtgataggacccaccacttattttttgtgtctatctctctccaa 36290675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 232 - 339
Target Start/End: Original strand, 32793334 - 32793441
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||||| ||||| |||||| | ||||||| ||| ||  || ||||||||||||||||    
T  32793334 tttgaagagataaagacgaataaaatcttgaaaaaagtaaaatataattgatgattgtgggacctacttagtagtaagaatcatcatctattttttgtgt 32793433  T
Q  332 ctatctct 339  Q
     |||||||    
T  32793434 atatctct 32793441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 240 - 299
Target Start/End: Complemental strand, 1475745 - 1475686
Alignment:
Q  240 gataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccact 299  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  1475745 gataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccact 1475686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 43222129 - 43222193
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||||||||||||||||||| ||| || || |||||||||||||||||||||||||||||||    
T  43222129 ataattaatgatggtgggatccatttaatgataagacccaccatctattttttgtgtctatctct 43222193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 43309063 - 43309182
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||||||||||||||||||||||||||||||||||          ||||||||||||||| | ||| ||| ||||| || ||||     
T  43309063 tctccatttcttcaatttgaagagataaagacacataaaatcttgaaaaa----------aattaatgatggtggaacccatttaatggtaagatccact 43309152  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    ||||||||||| ||||||||||| ||||||    
T  43309153 atctattttttatgtctatctctctccaac 43309182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 29340999 - 29341068
Alignment:
Q  276 taattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    |||||||||||||||||| ||||||| | ||||||||||| ||||||||| ||||||||||||| |||||    
T  29340999 taattaatgatggtgggacccacttaatagtaggacccactatctattttctgtgtctatctctctccaa 29341068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 3057381 - 3057483
Alignment:
Q  237 agagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatc 336  Q
    ||||||||||||||| ||||  |||||||||||  || ||||||||||||| ||| |  ||||| ||||||||| ||| ||||| |||||| ||||||||    
T  3057381 agagataaagacacaaaaaagtttgaaaaaagtataaaataattaatgatgatggaactcactttgtggtaggatccatcatcttttttttttgtctatc 3057480  T
Q  337 tct 339  Q
    |||    
T  3057481 tct 3057483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 13032238 - 13032187
Alignment:
Q  150 ggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  13032238 ggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgga 13032187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 37266851 - 37266800
Alignment:
Q  150 ggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  37266851 ggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgga 37266800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 40753117 - 40753168
Alignment:
Q  150 ggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  40753117 ggggtgaagatcctctctatttggcaaaataaataaagttttgcaagttgga 40753168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 345
Target Start/End: Original strand, 41660100 - 41660179
Alignment:
Q  266 aagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    |||| ||| ||||||||||||||||||| |||| ||||| |  |||||||||  |||||||||||||||||||| |||||    
T  41660100 aagtaaaaaataattaatgatggtgggacccacctagtgatgagacccaccacttattttttgtgtctatctctctccaa 41660179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 27428949 - 27428883
Alignment:
Q  279 ttaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||||||||| |  |||||| ||||||||  ||||||||||||||||||||||||||| |||||    
T  27428949 ttaatgatggtggaactcacttaatggtaggattcaccatctattttttgtgtctatctctttccaa 27428883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 28142881 - 28142807
Alignment:
Q  243 aaagacacataaaa-tcttgaaaaaa-gtgaaatataattaatgatggtgggatccacttagtggtaggacccac 315  Q
    |||||||||||||| ||||||||||| || |||||||||||||||||||||||  |||||| |||||||| ||||    
T  28142881 aaagacacataaaaatcttgaaaaaaagtaaaatataattaatgatggtgggactcacttaatggtaggatccac 28142807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 35660565 - 35660615
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  35660565 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgga 35660615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 40162737 - 40162803
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||||||| ||||||||||||  || |||||| ||||||||||| |||||    
T  40162737 taatgatggtgggatccacttagtgataggacccaccacttatttttttttgtctatctctttccaa 40162803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 339
Target Start/End: Original strand, 14688534 - 14688641
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||||||| | ||||  || |||||||| ||| |||  |||||||||||| ||||||||| |||||| | |||  ||||||||| |||||    
T  14688534 tttggagagataaagacatacaaaaatttaaaaaaagtcaaaaatatctaatgatggtggaatccacttaatggtagaatccaatatctattttatgtgt 14688633  T
Q  332 ctatctct 339  Q
    | ||||||    
T  14688634 cgatctct 14688641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 18625377 - 18625427
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||  || |||||||||||||    
T  18625377 gggtgaagatcctctccatttggcaaaataaatggagatttgcaagttgga 18625427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 11960674 - 11960597
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctct 339  Q
    ||||||| ||| ||||||||||| |||||||||||||||||| |  |||||||||  || |||||| |||||||||||    
T  11960674 aaaaagtaaaaaataattaatgaaggtgggatccacttagtgattagacccaccacttatttttttttgtctatctct 11960597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 3041380 - 3041309
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccacca-tctattttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||| || ||||||| |||||||||||| |   |||||||| ||||||||| |||||    
T  3041380 ataattaatgatggtgggacccgcttagtgataggacccaccacttgtttttttgtatctatctctctccaa 3041309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 11775909 - 11775862
Alignment:
Q  154 tgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||| ||||||||||||||| |||||||||  ||||||||||||||||    
T  11775909 tgaagatcctctccatttggtaaaataaatggagttttgcaagttgga 11775862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 31546490 - 31546553
Alignment:
Q  276 taattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    |||||||| ||| ||||||||||||| | ||||| ||||||||||||||| | |||||| ||||    
T  31546490 taattaattatgatgggatccacttaatagtagggcccaccatctattttatatgtctacctct 31546553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 337
Target Start/End: Original strand, 35650308 - 35650383
Alignment:
Q  262 aaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatct 337  Q
    |||||| | ||| ||||||||||||||||  || || ||| |  |||||||||||| |||||||||||||||||||    
T  35650308 aaaaaatttaaaaataattaatgatggtgaaattcatttaataataggacccaccacctattttttgtgtctatct 35650383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 2984462 - 2984392
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||| ||| |||||| |||||  || ||  |||||| ||||||||||||| |||||    
T  2984462 ataattaatgatggtgggacccatttagtgataggattcatcacttattttatgtgtctatctctctccaa 2984392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 8675069 - 8674999
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccacca-----tctattttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||| ||| ||||||||||||     | |||||||| ||||||||||| |||||    
T  8675069 taatgatggtgggatccacttcgtgataggacccaccacttattttattttttttgtctatctctttccaa 8674999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 32129573 - 32129623
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||  ||||||  ||||||||    
T  32129573 gggtgaagatcctctccatttggcaaaataaatggagttttataagttgga 32129623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 9465746 - 9465810
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||||||||||||  || || ||| || ||||| |||||| ||||||| |||||||||||||    
T  9465746 ataattaatgatggtgaaattcatttaatgataggatccaccacctattttatgtgtctatctct 9465810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 10173908 - 10173985
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggaccc 313  Q
    |||| |||||||||||||||    || ||||||||||| ||| ||||||||||||||| | | ||| |||||| ||||||||    
T  10173908 tttggagagataaagacaca----attttgaaaaaagtaaaaaataattaatgatggtagaacccatttagtgataggaccc 10173985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 18653364 - 18653428
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||| | |||||| ||  |||||| |||||| || ||| |||||||||||||||||||||||    
T  18653364 ataattattaatggtgagactcacttaatggtagaactcactatctattttttgtgtctatctct 18653428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 3e-48; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 4804393 - 4804522
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  4804393 tctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacc 4804492  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||||||||||||| ||||||    
T  4804493 atctattttttgtgtctatctctctccaac 4804522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 7162029 - 7162158
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||    
T  7162029 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtagtaggacccacc 7162128  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    |||||||| |||||||||||||| ||||||    
T  7162129 atctatttcttgtgtctatctctctccaac 7162158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 205 - 346
Target Start/End: Original strand, 12412570 - 12412711
Alignment:
Q  205 gggttaggatcctctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtg 304  Q
    ||||||||||||||||||||| || | |||| ||||||||| | ||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||||    
T  12412570 gggttaggatcctctccatttcttcaatttggagagataaaaatacataaaattttgaaaaaagtaaaatataattaatgatggtggaacccacttagtg 12412669  T
Q  305 gtaggacccaccatctattttttgtgtctatctctatccaac 346  Q
    |||||||||||||||||||| |||||||||||||| ||||||    
T  12412670 gtaggacccaccatctatttcttgtgtctatctctctccaac 12412711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 219 - 346
Target Start/End: Complemental strand, 21159497 - 21159370
Alignment:
Q  219 tccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccat 318  Q
    ||||||| || | |||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21159497 tccatttcttcaatttggagatataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccat 21159398  T
Q  319 ctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||||||| ||| ||||||    
T  21159397 ctattttttgtgtctatttctctccaac 21159370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 17944107 - 17944236
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| ||| |||||||||||||| |||    
T  17944107 tctccatttcttcaatttggagagataaaaacacataaaatcttggaaaaagtaaaatataattaatgatggtgggacccatttagtggtaggacctacc 17944206  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||||||||||||| ||||||    
T  17944207 atctattttttgtgtctatctctctccaac 17944236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 217 - 329
Target Start/End: Complemental strand, 1249276 - 1249164
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  1249276 tctccatttcttcaatttggaaagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacc 1249177  T
Q  317 atctattttttgt 329  Q
    |||||||||||||    
T  1249176 atctattttttgt 1249164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 217 - 329
Target Start/End: Original strand, 29698108 - 29698220
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| |||||    
T  29698108 tctccatttcttcaatttggagaaataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttaatggtaggatccacc 29698207  T
Q  317 atctattttttgt 329  Q
    |||||||||||||    
T  29698208 atctattttttgt 29698220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 27826503 - 27826605
Alignment:
Q  237 agagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatc 336  Q
    ||||||||||||||||||||  ||  ||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27826503 agagataaagacacataaaaaattttaaaaaataaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatc 27826602  T
Q  337 tct 339  Q
    |||    
T  27826603 tct 27826605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 247 - 346
Target Start/End: Complemental strand, 13089849 - 13089750
Alignment:
Q  247 acacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaac 346  Q
    ||||||||||| ||||||||| | ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  13089849 acacataaaattttgaaaaaaataaaatataattaatgatggtggggcccacttagtggtaggacccaccatctatattttgtgtctatctctctccaac 13089750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 1574702 - 1574582
Alignment:
Q  24 gcattgatttttgactttgctttagtgttgttttcaaattagttgttgaaataaggttttattaaaagtatcttcctaaacacgcccgcccaatgctgaa 123  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||| |||||||||||||| || |||||||||||||||||||| |||    |||||||||    
T  1574702 gcattgaattttgactttgctttagtgtt-ttttgaaattagttattgaaataaggttt-atgaaaagtatcttcctaaacacaccc----aatgctgaa 1574609  T
Q  124 attgtgatgatggttttatgtttgcag 150  Q
    ||| || ||||||||||||||||||||    
T  1574608 attctggtgatggttttatgtttgcag 1574582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 232 - 345
Target Start/End: Complemental strand, 227679 - 227565
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctatt-ttttgtg 330  Q
    |||| ||||||| ||||||| ||| | |||||||| || ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  227679 tttggagagatatagacacacaaagttttgaaaaaggtaaaaaataatcaatgatgatgggatccacttagtggtaggacccaccatctattcttttgtg 227580  T
Q  331 tctatctctatccaa 345  Q
    ||||||||| |||||    
T  227579 tctatctctctccaa 227565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 345
Target Start/End: Original strand, 24484870 - 24484952
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||| |||||    
T  24484870 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccaccacttattttttgtgtctatctctctccaa 24484952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 217 - 291
Target Start/End: Original strand, 32737819 - 32737893
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgg 291  Q
    ||||||||| || | |||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  32737819 tctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgg 32737893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 298
Target Start/End: Complemental strand, 1518417 - 1518327
Alignment:
Q  207 gttaggatcctctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccac 298  Q
    |||| ||||||||| |||| |||  |||||| ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  1518417 gttaagatcctctc-atttctttcatttgaaaagataaatacacataaaattttaaaaaaagtaaaatataattaatgatggtgggatccac 1518327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 298
Target Start/End: Complemental strand, 1516304 - 1516238
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccac 298  Q
    |||||| ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  1516304 tttgaaaagataaatacacataaaattttaaaaaaagtaaaatataattaatgatggtgggatccac 1516238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 345
Target Start/End: Complemental strand, 2800699 - 2800613
Alignment:
Q  259 ttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||||||| ||| ||||| ||||||||||||| ||||||| ||||| || |||| ||||||||| ||||||||||||| |||||    
T  2800699 ttgaaaaaagtaaaaaataatcaatgatggtgggacccacttaatggtatgatccactatctattttatgtgtctatctctctccaa 2800613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 7215936 - 7215854
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| |||  ||||||||||| |||||| ||| ||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  7215936 aaaaagtaaaacgtaattaatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaa 7215854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 30460780 - 30460831
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaat 283  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  30460780 tttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaat 30460831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 2142377 - 2142295
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| ||||||||||||||||| | |||| || || | ||||||||||  |||||||||||||||||||| |||||    
T  2142377 aaaaagtaaaaaataattaatgatggtggaacccacctaatgatgggacccaccacttattttttgtgtctatctctctccaa 2142295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 7098263 - 7098197
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||||||| ||||||||||||  || |||||| ||||||||||| |||||    
T  7098263 taatgatggtgggatccacttagtgataggacccaccacttatttttttttgtctatctctctccaa 7098197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 7545645 - 7545711
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatctatttttt-gtgtctatctctatccaa 345  Q
    ||||||| ||||||||||||||||| ||||||||||||  |||||||| |||||||||||| |||||    
T  7545645 taatgatagtgggatccacttagtgataggacccaccacttattttttggtgtctatctctctccaa 7545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 32737976 - 32737926
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  32737976 gggtgaagatcctctccatttggcaaaataaatagagttttgcaggttgga 32737926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 4804569 - 4804517
Alignment:
Q  149 aggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||||| |||||||||||||||||||||||||  |||||| |||||||||    
T  4804569 aggggtgaagatcctctccatttggcaaaataaatggagttttacaagttgga 4804517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 13888595 - 13888524
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctatt-ttttgtgtctatctctatccaa 345  Q
    ||||||||||||| ||||| ||| ||| |||||||| |||||||||||| |||||||| ||||||| |||||    
T  13888595 ataattaatgatgatgggacccagttaatggtaggaaccaccatctattattttgtgtatatctctctccaa 13888524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 13089705 - 13089755
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||   |||||||||||||||    
T  13089705 gggtgaagatcctctccatttggcaaaataaatggtgttttgcaagttgga 13089755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 1249105 - 1249154
Alignment:
Q  152 ggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||| |||||||||||||||||||||||||  ||||||| ||||||||    
T  1249105 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttgga 1249154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 17828639 - 17828570
Alignment:
Q  276 taattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    |||||| ||||| ||||||||||||| | |||| | |||| ||||||||| ||||||||||||| |||||    
T  17828639 taattattgatgatgggatccacttaatagtagaatccactatctattttatgtgtctatctctctccaa 17828570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 11180512 - 11180436
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||| ||| ||||||||||||||||| |||||||||||  |  ||| || || ||||||||||||| |||||||    
T  11180512 aaaaagtaaaaaataattaatgatggtggaatccacttagtattgagactcaacaactattttttgtgtttatctct 11180436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 346
Target Start/End: Original strand, 32737895 - 32737931
Alignment:
Q  310 acccaccatctattttttgtgtctatctctatccaac 346  Q
    |||||||||||||||||||||||||||||| ||||||    
T  32737895 acccaccatctattttttgtgtctatctctctccaac 32737931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 310
Target Start/End: Original strand, 2720376 - 2720411
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtagga 310  Q
    ||||||||||||||||||| ||||||||||||||||    
T  2720376 ataattaatgatggtgggacccacttagtggtagga 2720411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 17398809 - 17398774
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaa 267  Q
    |||| |||||||||||||||||||||||||||||||    
T  17398809 tttggagagataaagacacataaaatcttgaaaaaa 17398774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 17944282 - 17944231
Alignment:
Q  150 ggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||| ||||||| |||||||||||||||||  ||||||| ||||||||    
T  17944282 ggggtgaagatcctcttcatttggcaaaataaatggagttttgtaagttgga 17944231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 21159324 - 21159375
Alignment:
Q  150 ggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||| ||||||||||||||  |||||||||  ||||||||||||||||    
T  21159324 ggggtgaagatcctctccatttgttaaaataaatgaagttttgcaagttgga 21159375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 338
Target Start/End: Complemental strand, 32254103 - 32254040
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctc 338  Q
    |||||||||||| ||||||  |||||| || |||||||||||| || |||||| ||||||||||    
T  32254103 ataattaatgatagtgggactcacttaatgataggacccaccaccttttttttttgtctatctc 32254040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 12412744 - 12412706
Alignment:
Q  163 tctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  12412744 tctccatttggcaaaataaatggagttttgcaagttgga 12412706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 337
Target Start/End: Complemental strand, 20228543 - 20228514
Alignment:
Q  308 ggacccaccatctattttttgtgtctatct 337  Q
    ||||||||||||||||||||||||||||||    
T  20228543 ggacccaccatctattttttgtgtctatct 20228514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 337
Target Start/End: Complemental strand, 22122527 - 22122498
Alignment:
Q  308 ggacccaccatctattttttgtgtctatct 337  Q
    ||||||||||||||||||||||||||||||    
T  22122527 ggacccaccatctattttttgtgtctatct 22122498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 1515609 - 1515573
Alignment:
Q  262 aaaaaagtgaaatataattaatgatggtgggatccac 298  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  1515609 aaaaaagtaaaatataattaatgacggtgggatccac 1515573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 12734413 - 12734476
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    |||||||||||||||||||| ||||||||| ||||  |||  ||||| ||||||| |||||||||    
T  12734413 ataattaatgatggtgggattcacttagtgatagg-tccattatctagtttttgtttctatctct 12734476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 3e-48; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 12151712 - 12151841
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    |||||||||||| | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||     
T  12151712 tctccatttattcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaca 12151811  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||||||| ||||| ||||||    
T  12151812 atctattttttgtgtctttctctctccaac 12151841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 50294178 - 50294064
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50294178 tttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtaggatccacttagtggtaggacccaccatctattttttgtgt 50294079  T
Q  332 ctatctctatccaac 346  Q
    |||||||| ||||||    
T  50294078 ctatctctctccaac 50294064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 50484331 - 50484460
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||| | |||||||    
T  50484331 tctccatttctttaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgacggtgggacccacttagtggttgtacccacc 50484430  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||||||||||||| ||||||    
T  50484431 atctattttttgtgtctatctctctccaac 50484460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 217 - 333
Target Start/End: Complemental strand, 12381040 - 12380924
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||| |||||||    
T  12381040 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggactcacttagtggtagaacccacc 12380941  T
Q  317 atctattttttgtgtct 333  Q
    |||||||||||||||||    
T  12380940 atctattttttgtgtct 12380924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 217 - 333
Target Start/End: Complemental strand, 12385107 - 12384991
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||| |||||||    
T  12385107 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggactcacttagtggtagaacccacc 12385008  T
Q  317 atctattttttgtgtct 333  Q
    |||||||||||||||||    
T  12385007 atctattttttgtgtct 12384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 239 - 346
Target Start/End: Complemental strand, 23862064 - 23861953
Alignment:
Q  239 agataaagacacataaaatcttgaaaaaag-tgaaatataattaatgatggtgggatccacttagtggtagga---cccaccatctattttttgtgtcta 334  Q
    |||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||    
T  23862064 agataaagacacataaaatcttgaaaaaaaataaaatataattaatgatggtgggatccacttagtggtaggattcaccaccatctattttttgtgtcta 23861965  T
Q  335 tctctatccaac 346  Q
    ||||| ||||||    
T  23861964 tctctctccaac 23861953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 221 - 339
Target Start/End: Original strand, 40328225 - 40328344
Alignment:
Q  221 catttatttagtttgaagagataaa-gacacataaaatcttgaaaaaa-gtgaaatataattaatgatggtgggatccacttagtggtaggacccaccat 318  Q
    ||||| |||| |||| ||||||||| |||||||||||||||||||||| || |||||||| |||||||||||| | |||||||||||| |||||||||||    
T  40328225 catttctttaatttggagagataaaagacacataaaatcttgaaaaaaagtaaaatataactaatgatggtggaacccacttagtggtgggacccaccat 40328324  T
Q  319 ctattttttgtgtctatctct 339  Q
    ||| |||||||||||||||||    
T  40328325 cta-tttttgtgtctatctct 40328344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 48327269 - 48327155
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaag-tgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtg 330  Q
    |||| ||| ||||||  |||||||||||||||||||  | ||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||| ||    
T  48327269 tttggagatataaaggtacataaaatcttgaaaaaaaataaaatataattaatgatggtgg-acccacttagtggtaggactcaccatctattttttttg 48327171  T
Q  331 tctatctctatccaac 346  Q
    ||||||||| ||||||    
T  48327170 tctatctctctccaac 48327155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 24977205 - 24977307
Alignment:
Q  237 agagataaagacacataaaatcttgaaaaaag-tgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctat 335  Q
    ||||||||| ||| |||||||||||||||||  | |||||||| ||||||| |||| | |||||||||||||||| ||||||||||||||||||||||||    
T  24977205 agagataaataca-ataaaatcttgaaaaaaaataaaatataactaatgattgtggaacccacttagtggtaggatccaccatctattttttgtgtctat 24977303  T
Q  336 ctct 339  Q
    ||||    
T  24977304 ctct 24977307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 7841838 - 7841764
Alignment:
Q  219 tccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtggga 293  Q
    ||||||| || | |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7841838 tccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggga 7841764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 52280123 - 52280041
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||  |||||||| ||||||||||| |||||    
T  52280123 aaaaagtaaaaaataattaatgatggtgggatccacttagtgataggacccaccacttattttttatgtctatctctctccaa 52280041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 345
Target Start/End: Original strand, 39426201 - 39426283
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| |||||||||||| |||||| ||| ||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  39426201 aaaaagtaaaaaataattaatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaa 39426283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 26860134 - 26860058
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||| ||| |||||||||||| ||||||||||||||||| ||||||| || ||||||||| |||||||||||||    
T  26860134 aaaaagtaaaaaataattaatgattgtgggatccacttagtgataggacctactatctattttatgtgtctatctct 26860058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 217 - 298
Target Start/End: Original strand, 45977967 - 45978048
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccac 298  Q
    ||||||||| || | |||| ||||||||||||||||||||||||||||||| | |||||||||||| |||| ||||| ||||    
T  45977967 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaacgatgctgggacccac 45978048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 337
Target Start/End: Complemental strand, 32887914 - 32887790
Alignment:
Q  213 atcctctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacc 312  Q
    ||||||||||||| |||  |||| ||||||| |||| || ||||  ||||||||| |  || ||||||||||||||||||| ||| ||| |||||||| |    
T  32887914 atcctctccatttctttcatttggagagatatagactcaaaaaagtttgaaaaaaattgaaaataattaatgatggtgggacccatttaatggtaggatc 32887815  T
Q  313 caccatctattttttgtgtctatct 337  Q
    ||| || |||||| |||||||||||    
T  32887814 cactatttattttatgtgtctatct 32887790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 338
Target Start/End: Complemental strand, 24413354 - 24413291
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctc 338  Q
    ||||||||||||||||||| ||| ||| || |||||||||||||| ||||||||||||||||||    
T  24413354 ataattaatgatggtgggacccatttaatgataggacccaccatccattttttgtgtctatctc 24413291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 30077728 - 30077646
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| |||||||||||| ||||||  ||||||||| ||| ||||||||  |||||||||||||||||||| |||||    
T  30077728 aaaaagtaaaaaataattaatgatagtgggactcacttagtgatagaacccaccacttattttttgtgtctatctctctccaa 30077646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 6948899 - 6948832
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccacca--tctattttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||||||| ||||||||||||  | |||||||| ||||||||||| |||||    
T  6948899 taatgatggtgggatccacttagtgataggacccaccacttatattttttttgtctatctctctccaa 6948832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 12380831 - 12380883
Alignment:
Q  149 aggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  12380831 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgga 12380883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 12384898 - 12384950
Alignment:
Q  149 aggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  12384898 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgga 12384950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 46608465 - 46608409
Alignment:
Q  259 ttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccac 315  Q
    ||||||||||| ||| ||||||||||||||||||  |||||||||||||||||||||    
T  46608465 ttgaaaaaagtaaaaaataattaatgatggtgggtcccacttagtggtaggacccac 46608409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 45970806 - 45970861
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatg 287  Q
    |||||||||||||||||||| ||||| ||||||||||| ||| |||||||||||||    
T  45970806 tttgaagagataaagacacacaaaattttgaaaaaagtaaaaaataattaatgatg 45970861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 18107389 - 18107323
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctctatccaa 345  Q
    |||||||||||||||||| |||||| ||||||||||||  || |||||||||||||||||| |||||    
T  18107389 taatgatggtgggatccatttagtgataggacccaccacttatttttttgtgtctatctctctccaa 18107323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 263 - 345
Target Start/End: Original strand, 46045678 - 46045760
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||||||| |||||||||||||||||||| ||||||||| |||||| || ||  |||||||| |||  |||||| |||||    
T  46045678 aaaaagtgaaaaataattaatgatggtgggatacacttagtgataggactcatcacttattttttttgttcatctctctccaa 46045760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 50484505 - 50484455
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  50484505 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgga 50484455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 2845226 - 2845287
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtggga 293  Q
    |||| ||||||||| ||||| ||||| ||||||| ||| |||||||||||||||||||||||    
T  2845226 tttggagagataaatacacacaaaattttgaaaatagtaaaatataattaatgatggtggga 2845287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 18976398 - 18976306
Alignment:
Q  253 aaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctatt-ttttgtgtctatctctatccaa 345  Q
    ||||| ||||||||| | ||| ||||||||||||| ||||| | ||||| |||| ||| |||||||||||| |||||||||||||||| |||||    
T  18976398 aaaattttgaaaaaaataaaa-ataattaatgatgatgggacctacttaatggttggatccaccatctattcttttgtgtctatctctctccaa 18976306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 310
Target Start/End: Original strand, 23916033 - 23916124
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtagga 310  Q
    |||||||||||||  |||| ||| ||||| ||||| ||||| |||||||||||  || ||||||||||||||||||| |||| |||||||||||    
T  23916033 tctccatttatttcatttggagatataaaaacaca-aaaat-ttgaaaaaagtttaaaataattaatgatggtgggacccacgtagtggtagga 23916124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 32361377 - 32361308
Alignment:
Q  277 aattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaac 346  Q
    ||||||||||| ||||| | ||||||| |||||| ||||||||||| ||||||||| |||||| ||||||    
T  32361377 aattaatgatgatgggacctacttagtagtaggatccaccatctatcttttgtgtccatctctctccaac 32361308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 327
Target Start/End: Original strand, 44483728 - 44483822
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaag-tgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctatttttt 327  Q
    |||||||||||||||||||| ||  | |||||||||  | ||| ||||||||||||||||| ||||| ||| ||||||||||||| |||| ||||||    
T  44483728 tttgaagagataaagacacacaa--ttttgaaaaaaaataaaaaataattaatgatggtggaatccatttaatggtaggacccacaatctttttttt 44483822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 7840739 - 7840680
Alignment:
Q  287 ggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaac 346  Q
    ||||||| || |||| |||||||||||| ||||||||| |||||||||||||| ||||||    
T  7840739 ggtgggacccgcttaatggtaggacccatcatctatttcttgtgtctatctctctccaac 7840680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 327
Target Start/End: Original strand, 7844948 - 7845043
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctatttttt 327  Q
    |||||||||||||||| ||| | ||  |||||||||||  ||  |||||||| |||||||||  ||||||||||||||| |||  |||||||||||    
T  7844948 tttgaagagataaagatacaaagaagtttgaaaaaagtataaactaattaataatggtgggacacacttagtggtaggatccaatatctatttttt 7845043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 7783288 - 7783206
Alignment:
Q  239 agataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatcta 321  Q
    |||||||||||| |||||| |  |||||| | ||||||||||||||||||||  ||||||||| || ||||| |||| |||||    
T  7783288 agataaagacacgtaaaatttaaaaaaaattaaaatataattaatgatggtgcaatccacttaatgataggatccacaatcta 7783206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 325
Target Start/End: Complemental strand, 5047490 - 5047403
Alignment:
Q  237 agagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctatttt 325  Q
    |||||||||| |||| ||||  |||||||||   ||| ||||||||||||||||||| |||| ||||||||||| |||  |||||||||    
T  5047490 agagataaaggcacaaaaaagtttgaaaaaatataaa-ataattaatgatggtgggacccacatagtggtaggatccattatctatttt 5047403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 48327109 - 48327160
Alignment:
Q  150 ggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||| ||| |||||||||||||||||||||  || |||||||||||||    
T  48327109 ggggtgaagatcatctccatttggcaaaataaatggagatttgcaagttgga 48327160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 50294018 - 50294069
Alignment:
Q  150 ggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||| ||||||| |||||||||||||||||  || |||||||||||||    
T  50294018 ggggtgaagatcctcttcatttggcaaaataaatggagatttgcaagttgga 50294069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 12151886 - 12151836
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| ||| |||||||||||||||||||||  |||||||| |||||||    
T  12151886 gggtgaagatcttctccatttggcaaaataaatggagttttgccagttgga 12151836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 23861908 - 23861958
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||| |||| |||||||||||  ||||||||||||||||    
T  23861908 gggtgaatatcctctctatttagcaaaataaatgaagttttgcaagttgga 23861958  T

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Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 40328386 - 40328344
Alignment:
Q  159 atcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||||||||||||||||||||  |||||||||| |||||    
T  40328386 atcctctccatttggcaaaataaatggagttttgcaaattgga 40328344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 346
Target Start/End: Original strand, 45978041 - 45978079
Alignment:
Q  308 ggacccaccatctattttttgtgtctatctctatccaac 346  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  45978041 ggacccaccatctattttttgtatctatctctctccaac 45978079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 40988675 - 40988723
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataatt 280  Q
    |||| ||||||||||||||| ||||| ||||||||||| ||| ||||||    
T  40988675 tttggagagataaagacacacaaaattttgaaaaaagtaaaaaataatt 40988723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 19902033 - 19901919
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19902033 tttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgt 19901934  T
Q  332 ctatctctatccaac 346  Q
    |||||||| ||||||    
T  19901933 ctatctctctccaac 19901919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 217 - 346
Target Start/End: Complemental strand, 3952300 - 3952171
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  3952300 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccacttagtggtaggacccacc 3952201  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    ||||||||||| ||||||||||| ||||||    
T  3952200 atctattttttttgtctatctctctccaac 3952171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 217 - 346
Target Start/End: Complemental strand, 5763292 - 5763163
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  5763292 tctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacc 5763193  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||| ||||||||| ||||||    
T  5763192 atctattttttgtttctatctctctccaac 5763163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 34778386 - 34778488
Alignment:
Q  237 agagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatc 336  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  34778386 agagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggatccaccatctattttttgtgtctatc 34778485  T
Q  337 tct 339  Q
    |||    
T  34778486 tct 34778488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 217 - 339
Target Start/End: Complemental strand, 38079850 - 38079728
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  38079850 tctccattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaatccacttagtagtaggacccacc 38079751  T
Q  317 atctattttttgtgtctatctct 339  Q
    |||||||| ||||||||||||||    
T  38079750 atctatttcttgtgtctatctct 38079728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 56558239 - 56558353
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  56558239 tttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacccacttagtgataggacccaccatctattttttgtgt 56558338  T
Q  332 ctatctctatccaac 346  Q
    |||||||| ||||||    
T  56558339 ctatctctctccaac 56558353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 23610587 - 23610716
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| ||||||||    
T  23610587 tctccatttcttcaatttggagagataaagatacataaaatcttgaaaaaagtaaaatatatttaatgatggtgggacccacttagtggtatgacccacc 23610686  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||||||||||||| ||||||    
T  23610687 atctattttttgtgtctatctctctccaac 23610716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 239 - 339
Target Start/End: Complemental strand, 18207148 - 18207048
Alignment:
Q  239 agataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctc 338  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  18207148 agataaagacacataaaatcttgaaaaaggtaaaatataattaatgatgatgggacccacttagtggtaggacccaccatctattttttttgtctatctc 18207049  T
Q  339 t 339  Q
    |    
T  18207048 t 18207048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 239 - 339
Target Start/End: Original strand, 30567868 - 30567968
Alignment:
Q  239 agataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctc 338  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  30567868 agataaagacacataaaattttgaaaaaagtaaaatataattaatgatgatggaacccacttagtggtaggacccaccatctattttttgtgtctatctc 30567967  T
Q  339 t 339  Q
    |    
T  30567968 t 30567968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 232 - 339
Target Start/End: Complemental strand, 33262667 - 33262560
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| | | |||||||||||| ||||||||||||||||||||    
T  33262667 tttggagagataaagacacataaaattttaaaaaaagtaaaatataattaatgatggtgggacctatttagtggtaggatccaccatctattttttgtgt 33262568  T
Q  332 ctatctct 339  Q
    ||||||||    
T  33262567 ctatctct 33262560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 217 - 315
Target Start/End: Complemental strand, 12241538 - 12241440
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccac 315  Q
    ||||||||| || | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  12241538 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccac 12241440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 217 - 346
Target Start/End: Complemental strand, 5416597 - 5416467
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaa--gtgaaatataattaatgatggtgggatccacttagtggtaggaccca 314  Q
    ||||||||| || | |||| | |||||||||||||||||||||| ||||||  || ||||||||||||||||||||||| ||||||||||||||||||||    
T  5416597 tctccatttcttcaatttggacagataaagacacataaaatctttaaaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggaccca 5416498  T
Q  315 ccatctattttttgtgtctatctctatccaac 346  Q
    | ||||| ||||||||||||||||| ||||||    
T  5416497 caatcta-tttttgtgtctatctctctccaac 5416467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 232 - 339
Target Start/End: Original strand, 39862477 - 39862584
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |  || |||||| |||||| |||||||||||||||||||    
T  39862477 tttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatggtggaactcatttagtgataggacacaccatctattttttgtgt 39862576  T
Q  332 ctatctct 339  Q
    ||||||||    
T  39862577 ctatctct 39862584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 217 - 346
Target Start/End: Complemental strand, 33247258 - 33247131
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||||||||||||||||  ||||||| | ||||||||||||||||||||| | ||| |||||||||| |||||||    
T  33247258 tctccatttcttcaatttggagagataaagacacataaaatc--gaaaaaaataaaatataattaatgatggtggaacccatttagtggtagaacccacc 33247161  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    |||||||| |||||||||||||| ||||||    
T  33247160 atctatttcttgtgtctatctctctccaac 33247131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 24073577 - 24073690
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| |||||| ||| ||||||||||||||||||||   | |||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  24073577 tttggagagatgaaggcacataaaatcttgaaaaaaaa-atatataattaatgatggcgggacccacttagtggtaggacccaccatctatttgttgtgt 24073675  T
Q  332 ctatctctatccaac 346  Q
    |||||||| ||||||    
T  24073676 ctatctctctccaac 24073690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 237 - 337
Target Start/End: Complemental strand, 47922185 - 47922085
Alignment:
Q  237 agagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatc 336  Q
    |||||||||||||| |||||| ||||||||| | ||||||| ||||||||||||| | ||||||||||||| ||||||| ||||||||||||||| ||||    
T  47922185 agagataaagacacgtaaaatattgaaaaaaataaaatatatttaatgatggtggaacccacttagtggtaagacccactatctattttttgtgtttatc 47922086  T
Q  337 t 337  Q
    |    
T  47922085 t 47922085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 217 - 298
Target Start/End: Original strand, 12153116 - 12153197
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccac 298  Q
    ||||||||| || | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  12153116 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccac 12153197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 251 - 346
Target Start/End: Complemental strand, 12312572 - 12312476
Alignment:
Q  251 ataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctatt-ttttgtgtctatctctatccaac 346  Q
    |||||||||| || ||||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||||| |||| ||||||||||| ||||||    
T  12312572 ataaaatcttaaagaaagtaaaatataattaatgatgatgggacccacttagtggtaggatccaccatctatttttttttgtctatctctctccaac 12312476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 56269148 - 56269078
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  56269148 ataattaatgatggtgggacccacttagtggtaggacccaccacttattttttgtgtctatctctctccaa 56269078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 56453904 - 56453822
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| ||||| ||||||||||||| ||||||| || |||||||||||| ||||||||||||||||||||| |||||    
T  56453904 aaaaagtaaaaaataatgaatgatggtgggacccacttaatgataggacccaccacctattttttgtgtctatctctctccaa 56453822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 321
Target Start/End: Complemental strand, 31862335 - 31862246
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatcta 321  Q
    |||| ||||||| ||||||| ||||| ||  ||||||| ||| ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  31862335 tttggagagatatagacacacaaaattttagaaaaagtaaaaaataattaatgatggtgggacccacttagtggtaggatccaccatcta 31862246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 345
Target Start/End: Complemental strand, 47922455 - 47922368
Alignment:
Q  259 ttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctatt-ttttgtgtctatctctatccaa 345  Q
    ||||||||||| ||| |||||||  |||| ||||| ||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  47922455 ttgaaaaaagtaaaaaataattatagatgatgggacccacttagtggtaggacccaccatctattcttttgtgtctatatctctccaa 47922368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 345
Target Start/End: Original strand, 5524438 - 5524520
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| ||||||||||||||||||| ||||||| || ||||||||||||  |||||||| ||||||||||| |||||    
T  5524438 aaaaagtaaaaaataattaatgatggtgggacccacttactgataggacccaccacttattttttatgtctatctctctccaa 5524520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 37002335 - 37002253
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| ||||||||||||||||||| |||||||||  ||||| ||||||  |||||||||||||||||||| |||||    
T  37002335 aaaaagtaaaaaataattaatgatggtgggacccacttagtaataggatccaccacttattttttgtgtctatctctttccaa 37002253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 331
Target Start/End: Complemental strand, 25442290 - 25442190
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaata-taattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtg 330  Q
    |||| ||||||||||||||| | |||  | |||||||| ||| | |||||||||  |||| |||||||||||||||||||||||| ||||||||||||||    
T  25442290 tttggagagataaagacacacacaattataaaaaaagttaaaaaataattaatgtcggtgagatccacttagtggtaggacccacaatctattttttgtg 25442191  T
Q  331 t 331  Q
    |    
T  25442190 t 25442190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 36688266 - 36688190
Alignment:
Q  269 tgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||| ||||||||||||||||||| |||||||||| |||||| || ||  |||||||||||||||||||| |||||    
T  36688266 tgaaaaataattaatgatggtgggacccacttagtgataggactcaacacttattttttgtgtctatctctctccaa 36688190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 52018728 - 52018807
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccact 299  Q
    ||||||||| || | |||| ||||||||| ||||||||||||||||||||||| |||||||||||   |||||||||||||||    
T  52018728 tctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataatta---atggtgggatccact 52018807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 23474115 - 23474178
Alignment:
Q  276 taattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||||||||||||||| |||| | | ||||||||||||||||||||| |||||||||||||    
T  23474115 taattaatgatggtgggattcactcaatagtaggacccaccatctattttatgtgtctatctct 23474178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 345
Target Start/End: Original strand, 42010108 - 42010190
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| ||||||||||||||||||| ||| |||||| |||||||| |||  |||||||||| ||||||||| |||||    
T  42010108 aaaaagtaaaaaataattaatgatggtgggacccatttagtgataggacccgccacttattttttgtatctatctctctccaa 42010190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 55160438 - 55160372
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||||||| ||||||||||||  || |||||||||||||||||| |||||    
T  55160438 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctttccaa 55160372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 345
Target Start/End: Original strand, 1871238 - 1871350
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||||||||| | ||  |||||||||   ||| ||||||||||||| ||||| ||||||||| |||||| |||| |||||| |||| |||    
T  1871238 tttggagagataaagacacaaagaaatttgaaaaaatataaa-ataattaatgatgatgggacccacttagtagtaggatccactatctatattttttgt 1871336  T
Q  332 ctatctctatccaa 345  Q
    |||||||| |||||    
T  1871337 ctatctctctccaa 1871350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 217 - 290
Target Start/End: Complemental strand, 17080770 - 17080697
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtg 290  Q
    ||||||||| || | |||| ||||||||||||| ||||||||||| ||||||| ||||||||| ||||||||||    
T  17080770 tctccatttcttcaatttggagagataaagacagataaaatcttggaaaaagtaaaatataatgaatgatggtg 17080697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 56558401 - 56558348
Alignment:
Q  148 caggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  56558401 caggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgga 56558348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 25219003 - 25219070
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccacca--tctattttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||||||| ||||||||||||  | | |||||||||||||||||| |||||    
T  25219003 taatgatggtgggatccacttagtgataggacccaccacttattttttttgtgtctatctctctccaa 25219070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 46238974 - 46239034
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctct 339  Q
    ||||||||||||||||||||||||| ||||||||||||  || ||||||||||||||||||    
T  46238974 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctct 46239034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 48084609 - 48084533
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||| ||| ||||||||||||||||||| |||||||||| ||| ||||||||  ||| |||| |||||||||||    
T  48084609 aaaaagtaaaaaataattaatgatggtgggacccacttagtgctagaacccaccacttatgttttatgtctatctct 48084533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 12153273 - 12153223
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  12153273 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgga 12153223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 12312431 - 12312481
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  12312431 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgga 12312481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 17493010 - 17493076
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctctatccaa 345  Q
    |||||||||||| |||||||||||| ||||||||||||  || |||||||||||||||||| |||||    
T  17493010 taatgatggtggaatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaa 17493076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 32146510 - 32146576
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||||||| ||||||||||||  || |||||||| ||||||||| |||||    
T  32146510 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtatctatctctctccaa 32146576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 33247086 - 33247136
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  33247086 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgga 33247136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 53526096 - 53526162
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||||||| ||||||||||||  || |||||| ||||||||||| |||||    
T  53526096 taatgatggtgggatccacttagtgataggacccaccacttatttttttttgtctatctctctccaa 53526162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 43447691 - 43447638
Alignment:
Q  237 agagataaagacacataaaa-tcttgaaaaaagtgaaatataattaatgatggt 289  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||||||||||    
T  43447691 agagataaagacacataaaaattttgaaaaaagtaaaatataattaatgatggt 43447638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 1015926 - 1015862
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||||||||||||||| |||| || || | ||||||||||  ||||||||||||||||||||    
T  1015926 ataattaatgatggtgggacccacctaatgatgggacccaccacttattttttgtgtctatctct 1015862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 18206996 - 18207043
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagtt 198  Q
    ||||||| |||||||||||||| |||||||||| ||||||||||||||    
T  18206996 gggtgaagatcctctccatttgacaaaataaatgtagttttgcaagtt 18207043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 34778539 - 34778492
Alignment:
Q  152 ggtgaacatcctctccatttggcaaaataaatatagttttgcaagttg 199  Q
    |||||| |||||||||||||||||||||||||  ||||||||||||||    
T  34778539 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttg 34778492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 337
Target Start/End: Complemental strand, 42844272 - 42844197
Alignment:
Q  262 aaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatct 337  Q
    |||||||| ||| |||||||||||||| |||||||| ||| | ||||||| |||  |||||||| |||||||||||    
T  42844272 aaaaaagtaaaaaataattaatgatggagggatccatttaatagtaggacacactctctattttatgtgtctatct 42844197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 3952126 - 3952176
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||  ||||| ||||||||||    
T  3952126 gggtgaagatcctctccatttggcaaaataaatggagtttggcaagttgga 3952176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 5416422 - 5416472
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||| ||||||||||  ||||||||||||||||    
T  5416422 gggtgaagatcctctccatttgacaaaataaatggagttttgcaagttgga 5416472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 279
Target Start/End: Complemental strand, 12312613 - 12312571
Alignment:
Q  237 agagataaagacacataaaatcttgaaaaaagtgaaatataat 279  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  12312613 agagataaagacacataaaattttgaaaaaagtaaaatataat 12312571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 19901874 - 19901924
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| ||||||||||||||| |||||||||  ||||||||||||||||    
T  19901874 gggtgaagatcctctccatttggtaaaataaatggagttttgcaagttgga 19901924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 52018882 - 52018832
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| ||||||||||||| |||||||||||  ||||||||||||||||    
T  52018882 gggtgaagatcctctccatttagcaaaataaatggagttttgcaagttgga 52018832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 34927488 - 34927553
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctatt-ttttgtgtctatctct 339  Q
    ||||||||||||| || ||   ||||| ||||||||||||||||||||| ||||||||||||||||    
T  34927488 ataattaatgatgatgagacatacttaatggtaggacccaccatctattcttttgtgtctatctct 34927553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 26428971 - 26429034
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctatt-ttttgtgtctatct 337  Q
    ||||||||||||| || || ||| | ||||||||||| ||||||||||| ||||||||||||||    
T  26428971 ataattaatgatgatgagacccattcagtggtaggactcaccatctattcttttgtgtctatct 26429034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 346
Target Start/End: Original strand, 12153190 - 12153228
Alignment:
Q  308 ggacccaccatctattttttgtgtctatctctatccaac 346  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  12153190 ggacccaccatctaatttttgtgtctatctctctccaac 12153228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 23610761 - 23610711
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| ||||||||||||||  |||||||||  ||||||||||||||||    
T  23610761 gggtgaagatcctctccatttgataaaataaatggagttttgcaagttgga 23610711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 33524381 - 33524331
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||  || |||| ||||||||    
T  33524381 gggtgaagatcctctccatttggcaaaataaatggagatttggaagttgga 33524331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 33841912 - 33841858
Alignment:
Q  239 agataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtggga 293  Q
    ||||||||||||| ||||||||||||| |||  |  |||||||||||||||||||    
T  33841912 agataaagacacaaaaaatcttgaaaagagtatacaataattaatgatggtggga 33841858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 5763116 - 5763168
Alignment:
Q  149 aggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||||| |||||||| ||||||||||||| ||  |||||| |||||||||    
T  5763116 aggggtgaagatcctctcaatttggcaaaatatatggagttttacaagttgga 5763168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 17317215 - 17317247
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacc 312  Q
    ||||||||||||||||||||||||| |||||||    
T  17317215 taatgatggtgggatccacttagtgataggacc 17317247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 199
Target Start/End: Complemental strand, 30568008 - 30567972
Alignment:
Q  163 tctccatttggcaaaataaatatagttttgcaagttg 199  Q
    |||||||||||||||||||||  ||||||||||||||    
T  30568008 tctccatttggcaaaataaatggagttttgcaagttg 30567972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 38865280 - 38865344
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||||||||| ||| | | | ||| |||||||||| ||||  ||||||||||||||||||||    
T  38865280 ataattaatgatgctggaacctatttaatggtaggacctaccacatattttttgtgtctatctct 38865344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 8e-46; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 35316770 - 35316899
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||    
T  35316770 tctccatttcttcaatttggagagataaagacatataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggatccacc 35316869  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||||||||||||| ||||||    
T  35316870 atctattttttgtgtctatctctctccaac 35316899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 13238641 - 13238755
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  13238641 tttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtgggacccacttggtggtaggacccaccatctattttttgtgt 13238740  T
Q  332 ctatctctatccaac 346  Q
    |||||||| ||||||    
T  13238741 ctatctctctccaac 13238755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 217 - 339
Target Start/End: Original strand, 28564836 - 28564959
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttg-aaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccac 315  Q
    ||||||||| || | |||| ||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  28564836 tctccatttcttcaatttggagagataaagacacataaaatcttttaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccac 28564935  T
Q  316 catctattttttgtgtctatctct 339  Q
    ||||||||||||||||||||||||    
T  28564936 catctattttttgtgtctatctct 28564959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 240 - 346
Target Start/End: Complemental strand, 23259594 - 23259488
Alignment:
Q  240 gataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    |||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  23259594 gataaagacatataaaatcttaaaaaaagtaaaatataattaatgatggtgggatccacttagtagtaggacccaccagctattttttgtgtctatctct 23259495  T
Q  340 atccaac 346  Q
     ||||||    
T  23259494 ctccaac 23259488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 262 - 345
Target Start/End: Original strand, 30709100 - 30709183
Alignment:
Q  262 aaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    |||||||| ||| | ||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||| |||||    
T  30709100 aaaaaagtaaaaaacaattaatgatggtgggatccacttagtggtaggacccaatatctattttatgtgtctatctctctccaa 30709183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 217 - 298
Target Start/End: Original strand, 39465720 - 39465801
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccac 298  Q
    ||||||||| || | |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  39465720 tctccattttttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccac 39465801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 345
Target Start/End: Original strand, 374984 - 375066
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| ||||||||||||||||||| |||||||||  ||||||||||||  |||||||||||||||||||| |||||    
T  374984 aaaaagtaaaaaataattaatgatggtgggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaa 375066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 10532702 - 10532582
Alignment:
Q  24 gcattgatttttgactttgctttagtgttgttttcaaattagttgttgaaataaggttttattaaaagtatcttcctaaacacgcccgcccaatgctgaa 123  Q
    ||||||| ||||||||||||||||||||| ||||||||||| || ||||||||| | ||||| |||||||||||||||||||    |  |||||||||||    
T  10532702 gcattgaattttgactttgctttagtgtt-ttttcaaattaattattgaaataa-gatttatgaaaagtatcttcctaaaca----catccaatgctgaa 10532609  T
Q  124 attgtgatgatggttttatgtttgcag 150  Q
    |||    ||||||||||||||||||||    
T  10532608 attcatgtgatggttttatgtttgcag 10532582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 23459930 - 23459848
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| ||||||||||||||||||| ||| |||||| |||||||| |||  |||||||||||||||||||| |||||    
T  23459930 aaaaagtaaaaaataattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaa 23459848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 298
Target Start/End: Complemental strand, 374548 - 374487
Alignment:
Q  237 agagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccac 298  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  374548 agagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgattgtaggatccac 374487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 217 - 286
Target Start/End: Complemental strand, 41983469 - 41983401
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgat 286  Q
    ||||||||| |||| |||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  41983469 tctccatttctttaatttggagagataaagacacataaa-tcttgaaaaaagtaaaatataattaatgat 41983401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 345
Target Start/End: Original strand, 2063343 - 2063427
Alignment:
Q  262 aaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggaccca-ccatctattttttgtgtctatctctatccaa 345  Q
    ||||||||  ||||| |||||||||||||| | |||||| ||||||||||| | ||||||||||||||||||||||||| |||||    
T  2063343 aaaaaagtataatattattaatgatggtggaacccacttggtggtaggaccaaaccatctattttttgtgtctatctctctccaa 2063427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 21454582 - 21454503
Alignment:
Q  259 ttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||||||| ||| ||||||||||||||||| | ||||||| ||||| ||||||| ||||| |||||||||||||||||    
T  21454582 ttgaaaaaagtaaaaaataattaatgatggtggaacccacttaatggtatgacccacaatcta-tttttgtgtctatctct 21454503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 8988858 - 8988928
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||| |||||||||| ||||||| | ||  |||||||||||||||||||| |||||    
T  8988858 ataattaatgatggtgggacccacttagtgataggacctatcacttattttttgtgtctatctctctccaa 8988928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 13780506 - 13780572
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||||||| ||||||||||||  || |||||||||||||||||| |||||    
T  13780506 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaa 13780572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 40254217 - 40254157
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatctatt-ttttgtgtctatctct 339  Q
    ||||||||||||||||||||||||| ||||||||||||  |||| ||||||||||||||||    
T  40254217 taatgatggtgggatccacttagtgataggacccaccacttattattttgtgtctatctct 40254157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 10525881 - 10525765
Alignment:
Q  22 gtgcattgatttttgactttgctttagtgttgttttcaaattagttgttgaaataaggttttattaaaagtatcttcctaaacacgcccgcccaatgctg 121  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||| ||     ||||||| || |||||||||||||| ||||| |||    |||||||    
T  10525881 gtgcattgaattttgactttgctttagtgtt-ttttcaaat-agttttt-----aaggttt-atgaaaagtatcttccttaacacaccc----aatgctg 10525794  T
Q  122 aaattgtgatgatggttttatgtttgcag 150  Q
    ||||| || ||||||||||||||||||||    
T  10525793 aaattctggtgatggttttatgtttgcag 10525765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 35316944 - 35316894
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  35316944 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgga 35316894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 298
Target Start/End: Complemental strand, 45625172 - 45625111
Alignment:
Q  237 agagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccac 298  Q
    |||||||||||||| |||||||||||||||  | ||||| ||||||||||||||||| ||||    
T  45625172 agagataaagacacgtaaaatcttgaaaaatataaaataaaattaatgatggtgggacccac 45625111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 4446980 - 4446904
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||| ||| |||||||||||| |||  | ||| |||||||||||| |||| ||||||||| |||||||||||||    
T  4446980 aaaaagtaaaaaataattaatgatagtgaaacccaattagtggtaggatccactatctattttatgtgtctatctct 4446904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 19908783 - 19908846
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctc 338  Q
    ||||||||||||||||||| |||||||   ||||||| ||| ||||||||| ||||||||||||    
T  19908783 ataattaatgatggtgggacccacttaaaagtaggactcactatctattttatgtgtctatctc 19908846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 23259442 - 23259493
Alignment:
Q  150 ggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||| |||||||||||||||||||||||||   |||||||||||||||    
T  23259442 ggggtgaagatcctctccatttggcaaaataaatggtgttttgcaagttgga 23259493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 345
Target Start/End: Original strand, 29188644 - 29188727
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacca-tctattttttgtgtctatctctatccaa 345  Q
    ||||||| ||| ||||||||||||||||||| || ||||||| |||||| ||||| |   |||||||||||||||||| |||||    
T  29188644 aaaaagtaaaaaataattaatgatggtgggacccgcttagtgataggacgcaccacttgtttttttgtgtctatctctctccaa 29188727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 345
Target Start/End: Original strand, 36929706 - 36929789
Alignment:
Q  262 aaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    |||||||| |||  ||||||||||||| || ||||| ||| ||||||||| ||| | ||||||| ||||||||||||| |||||    
T  36929706 aaaaaagtaaaaagtaattaatgatggcggaatccatttaatggtaggacacactacctattttatgtgtctatctctctccaa 36929789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 3594865 - 3594931
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||||||| ||||| ||||||  || |||||| ||||||||||| |||||    
T  3594865 taatgatggtgggatccacttagtgataggatccaccacttatttttttttgtctatctctctccaa 3594931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 41435271 - 41435205
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctctatccaa 345  Q
    |||| |||||||||||||||||||| ||||| ||||||  || |||||||||||||||||| |||||    
T  41435271 taataatggtgggatccacttagtgataggatccaccacttatttttttgtgtctatctctctccaa 41435205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 45625035 - 45625085
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| |||||||||||||||||||||||||  |||||| |||||||||    
T  45625035 gggtgaagatcctctccatttggcaaaataaatggagttttacaagttgga 45625085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 2061337 - 2061382
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatata 277  Q
    |||| |||||||||||| |||||||||||||||||||| |||||||    
T  2061337 tttggagagataaagacgcataaaatcttgaaaaaagtaaaatata 2061382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 12949430 - 12949482
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatga 285  Q
    |||| ||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  12949430 tttggagagataaagatacataaaatcttgaaaaaagt-aaaaataattaatga 12949482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 30857750 - 30857686
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    |||||||||||||||| |||||| ||| | |||||| |||  |||||||||||||||||| ||||    
T  30857750 ataattaatgatggtgtgatccatttaatagtaggatccattatctattttttgtgtctacctct 30857686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 10877693 - 10877748
Alignment:
Q  262 aaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacca 317  Q
    |||||| |||||||||||||||||||||||||| || ||| || ||||| ||||||    
T  10877693 aaaaaaatgaaatataattaatgatggtgggattcatttaatgataggatccacca 10877748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 13238797 - 13238750
Alignment:
Q  154 tgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||| |||||||||||||||||||||||||  || |||||||||||||    
T  13238797 tgaagatcctctccatttggcaaaataaatggagatttgcaagttgga 13238750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 30803311 - 30803358
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtagga 310  Q
    ||||||||||| | ||||||||||||||||||||||||| || |||||    
T  30803311 aaaaagtgaaaaacaattaatgatggtgggatccacttactgatagga 30803358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 373236 - 373174
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatct 337  Q
    ||||||||| |||||||||| || ||| |  || ||||||||| |||||||||||||||||||    
T  373236 ataattaataatggtgggattcatttaataatatgacccaccacctattttttgtgtctatct 373174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 314
Target Start/End: Original strand, 6288050 - 6288084
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggaccca 314  Q
    ||||||||||||||||||||||||| |||||||||    
T  6288050 taatgatggtgggatccacttagtgataggaccca 6288084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 15709772 - 15709841
Alignment:
Q  276 taattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    |||||||||||| ||| | ||||||| |||||||| |||| ||||||||| | ||| ||||||| |||||    
T  15709772 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaa 15709841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 28565011 - 28564979
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaat 183  Q
    ||||||| |||||||||||||||||||||||||    
T  28565011 gggtgaagatcctctccatttggcaaaataaat 28564979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 41073021 - 41072961
Alignment:
Q  275 ataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctat 335  Q
    |||||||||||| ||| |||||| ||| || |||||||||||| ||||||| | |||||||    
T  41073021 ataattaatgattgtgagatccatttaatgataggacccaccaactattttatatgtctat 41072961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 208008 - 208137
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| |||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  208008 tctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgatgggacccacttagtggtaggacccacc 208107  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    ||||||||||||||| ||||||| ||||||    
T  208108 atctattttttgtgtttatctctctccaac 208137  T

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Target: scaffold0012; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 208183 - 208132
Alignment:
Q  150 ggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  208183 ggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgga 208132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 7107 - 7221
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||| | ||||||| | |||||||||||||||||||||||||||    
T  7107 tttgcagagataaagacatataaaatcttgaaaaaaataaaatataattaatgatggtggaacccacttaatagtaggacccaccatctattttttgtgt 7206  T
Q  332 ctatctctatccaac 346  Q
    |||||||| ||||||    
T  7207 ctatctctctccaac 7221  T

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Target: scaffold0250; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 7270 - 7237
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaata 184  Q
    ||||||| ||||||||||||||||||||||||||    
T  7270 gggtgaagatcctctccatttggcaaaataaata 7237  T

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Target: scaffold0035 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 217 - 346
Target Start/End: Complemental strand, 16527 - 16398
Alignment:
Q  217 tctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccacc 316  Q
    ||||||||| || | |||| |||||||||   ||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  16527 tctccatttcttcaatttggagagataaaattacataaaatcttgaaaaaaataaaatataattaatgatgatgggacccacttagtggtaggacccacc 16428  T
Q  317 atctattttttgtgtctatctctatccaac 346  Q
    || |||||||||||||||||||| ||||||    
T  16427 atttattttttgtgtctatctctctccaac 16398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 16352 - 16403
Alignment:
Q  150 ggggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    |||||||| ||||||||| || ||||||||||||  ||||||||||||||||    
T  16352 ggggtgaagatcctctccgttaggcaaaataaatggagttttgcaagttgga 16403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 237 - 346
Target Start/End: Complemental strand, 6545 - 6436
Alignment:
Q  237 agagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatc 336  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||| | | ||| ||||| ||||||||||||||||||||||||||||| ||    
T  6545 agagataaagacacataaaatcttggaaaaagtaaaatataattaatgatggttgtacccatttagttgtaggacccaccatctattttttgtgtctgtc 6446  T
Q  337 tctatccaac 346  Q
    ||| ||||||    
T  6445 tctttccaac 6436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 298
Target Start/End: Original strand, 13629 - 13722
Alignment:
Q  205 gggttaggatcctctccatttatttagtttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccac 298  Q
    ||||||||||||||||||||| || | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  13629 gggttaggatcctctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccac 13722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 13799 - 13749
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| ||| |||||||||||||||||||||| |||||||| |||||||    
T  13799 gggtgaagatcttctccatttggcaaaataaatagagttttgctagttgga 13749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 22552 - 22450
Alignment:
Q  237 agagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatc 336  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||| || |||| |  ||||||||||||||| |||| ||||||||||||||||||||    
T  22552 agagataaatacacataaaatcttgaaaaaagtaaaatataattaattattgtggaactcacttagtggtaggatccactatctattttttgtgtctatc 22453  T
Q  337 tct 339  Q
    |||    
T  22452 tct 22450  T

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Target: scaffold0008 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 9313 - 9202
Alignment:
Q  232 tttgaagagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgt 331  Q
    |||| |||||||||| ||||| ||||||| ||||||    |||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||    
T  9313 tttggagagataaaggcacatgaaatcttaaaaaaat---aatataattaatgatggtggaatccacttagtggttggacccaccatctattttctgtgt 9217  T
Q  332 ctatctctatccaac 346  Q
    |||||||| ||||||    
T  9216 ctatctctctccaac 9202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 9157 - 9207
Alignment:
Q  151 gggtgaacatcctctccatttggcaaaataaatatagttttgcaagttgga 201  Q
    ||||||| ||| |||||||||||||||||||||  || |||||||||||||    
T  9157 gggtgaagatcatctccatttggcaaaataaatggagatttgcaagttgga 9207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1067 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold1067
Description:

Target: scaffold1067; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 2454 - 2334
Alignment:
Q  24 gcattgatttttgactttgctttagtgttgttttcaaattagttgttgaaataaggttttattaaaagtatcttcctaaacacgcccgcccaatgctgaa 123  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||| ||||||||||| ||||| |||||||| |||||||    || | ||||||||||||    
T  2454 gcattgaattttgactttgctttagtgtt-ttttgaaattagttattgaaataagg-tttatgaaaagtattttcctaa----gcacacccaatgctgaa 2361  T
Q  124 attgtgatgatggttttatgtttgcag 150  Q
    ||| || ||||| ||||||||||||||    
T  2360 attctggtgatgattttatgtttgcag 2334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 17390 - 17314
Alignment:
Q  263 aaaaagtgaaatataattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctct 339  Q
    ||||||| ||| ||||||||||||||||||| |||||||||| ||||||||| ||  ||||||||||||||||||||    
T  17390 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccagcacttattttttgtgtctatctct 17314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 4768 - 4702
Alignment:
Q  280 taatgatggtgggatccacttagtggtaggacccaccatcta-ttttttgtgtctatctctatccaa 345  Q
    ||||||||||||||||||||||||| ||||||||||||  || |||||||||||||||||| |||||    
T  4768 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaa 4702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 237 - 298
Target Start/End: Complemental strand, 73950 - 73889
Alignment:
Q  237 agagataaagacacataaaatcttgaaaaaagtgaaatataattaatgatggtgggatccac 298  Q
    ||||||||| ||||||||||||||||||||| | ||||||||||||||||| ||||| ||||    
T  73950 agagataaaaacacataaaatcttgaaaaaaataaaatataattaatgatgatgggacccac 73889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 58684 - 58753
Alignment:
Q  276 taattaatgatggtgggatccacttagtggtaggacccaccatctattttttgtgtctatctctatccaa 345  Q
    |||||||||||| ||| | ||||||| |||||||| |||| ||||||||| | ||| ||||||| |||||    
T  58684 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaa 58753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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