View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17452_low_61 (Length: 288)
Name: NF17452_low_61
Description: NF17452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17452_low_61 |
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Alignment Details
Target: chr6 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 31596284 - 31596004
Alignment:
| Q |
1 |
cctactagagggtgaacctgatgaaactatatttcacgtgcttgatgatattatatcttggcttgatgatcatagcagcacaaaaaacaaagtttaagca |
100 |
Q |
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| T |
31596284 |
cctactagagggtgaacctgatgaaactatatttcacgtgcttgatgatattatatcttggcttgatgatcatagcagcacaaaaaacaaagtttaagca |
31596185 |
T |
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| Q |
101 |
ttttgttaatttgtaatatttgttacaaaactagtcatcagcacaaatactttagtgtttgtatgtattcatgttctatctcatgagaactagtcaaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31596184 |
ttttgttaatttgtaatatttgttacaaaactagtcattagcacaaatactttagtgtttgtatgtattcatgttctatctcatgagaactagtcaaatt |
31596085 |
T |
|
| Q |
201 |
tttactttaatgtttaatgcttgaaaacaaccgacatgtatttggttggatgtatctacttattgcaaataatattcttcg |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |
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| T |
31596084 |
tttactttaatgtttaatgcttgaaaacaaccgacatgtatttggttggatgtatctatttattgcaaataatattgttcg |
31596004 |
T |
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