View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17452_low_70 (Length: 264)

Name: NF17452_low_70
Description: NF17452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17452_low_70
NF17452_low_70
[»] chr3 (47 HSPs)
chr3 (1-96)||(10617372-10617472)
chr3 (1-64)||(4168218-4168281)
chr3 (1-64)||(272255-272318)
chr3 (1-64)||(41554028-41554091)
chr3 (1-64)||(53489912-53489975)
chr3 (1-99)||(39074413-39074517)
chr3 (1-64)||(858624-858687)
chr3 (1-64)||(40362668-40362731)
chr3 (1-64)||(52520716-52520779)
chr3 (1-55)||(43786915-43786969)
chr3 (1-61)||(2119469-2119529)
chr3 (1-61)||(31514829-31514889)
chr3 (1-64)||(7468446-7468509)
chr3 (1-64)||(13159932-13159995)
chr3 (1-64)||(20924027-20924090)
chr3 (1-64)||(22248921-22248984)
chr3 (1-64)||(29241672-29241735)
chr3 (1-64)||(42964337-42964400)
chr3 (1-64)||(46352669-46352732)
chr3 (1-64)||(48725306-48725369)
chr3 (1-64)||(49893366-49893429)
chr3 (1-61)||(2505387-2505447)
chr3 (1-61)||(2938128-2938188)
chr3 (1-64)||(38852249-38852315)
chr3 (1-61)||(42548133-42548193)
chr3 (1-61)||(50299033-50299093)
chr3 (9-64)||(18014707-18014762)
chr3 (1-64)||(28139344-28139407)
chr3 (1-60)||(41993707-41993766)
chr3 (1-64)||(43269827-43269890)
chr3 (1-64)||(52246617-52246680)
chr3 (14-64)||(52718202-52718252)
chr3 (1-47)||(33140937-33140983)
chr3 (1-62)||(50395650-50395711)
chr3 (2-57)||(21010039-21010092)
chr3 (20-60)||(23925319-23925359)
chr3 (1-57)||(24488408-24488464)
chr3 (2-57)||(25743852-25743908)
chr3 (1-64)||(41304040-41304101)
chr3 (1-64)||(49529354-49529420)
chr3 (1-64)||(11308298-11308361)
chr3 (1-48)||(50359274-50359321)
chr3 (18-64)||(2391642-2391688)
chr3 (18-64)||(2393403-2393449)
chr3 (8-58)||(16990728-16990778)
chr3 (1-38)||(6842604-6842641)
chr3 (1-42)||(6842676-6842717)
[»] chr5 (29 HSPs)
chr5 (1-95)||(21547482-21547581)
chr5 (1-96)||(35504328-35504429)
chr5 (1-90)||(11846075-11846170)
chr5 (1-95)||(34650921-34651020)
chr5 (1-93)||(35132522-35132620)
chr5 (1-93)||(8787339-8787437)
chr5 (1-64)||(13661843-13661906)
chr5 (1-60)||(20175266-20175325)
chr5 (1-64)||(40564492-40564555)
chr5 (1-55)||(12506340-12506394)
chr5 (8-94)||(10069968-10070060)
chr5 (1-95)||(11958055-11958155)
chr5 (1-64)||(2619645-2619708)
chr5 (1-60)||(4837296-4837355)
chr5 (1-64)||(19647746-19647809)
chr5 (1-64)||(31909666-31909729)
chr5 (1-94)||(9721695-9721794)
chr5 (10-54)||(39069425-39069469)
chr5 (1-64)||(10054440-10054503)
chr5 (1-64)||(13470186-13470249)
chr5 (1-64)||(40057342-40057405)
chr5 (2-64)||(6284830-6284892)
chr5 (3-64)||(19436926-19436987)
chr5 (1-61)||(6283600-6283660)
chr5 (2-41)||(4268620-4268659)
chr5 (4-57)||(22973727-22973780)
chr5 (2-57)||(5302368-5302424)
chr5 (2-54)||(10955997-10956048)
chr5 (1-64)||(39067023-39067087)
[»] chr6 (37 HSPs)
chr6 (94-154)||(10964901-10964961)
chr6 (1-64)||(32985281-32985344)
chr6 (94-250)||(10964720-10964873)
chr6 (1-64)||(2350687-2350750)
chr6 (1-64)||(12145205-12145268)
chr6 (1-64)||(26467212-26467275)
chr6 (1-64)||(34396615-34396678)
chr6 (1-94)||(392095-392194)
chr6 (1-61)||(2580990-2581050)
chr6 (4-64)||(27433527-27433587)
chr6 (1-64)||(1391266-1391329)
chr6 (1-64)||(1840335-1840398)
chr6 (1-64)||(3515801-3515864)
chr6 (1-64)||(7851247-7851310)
chr6 (1-64)||(11115183-11115246)
chr6 (1-64)||(13417050-13417113)
chr6 (1-64)||(13529490-13529553)
chr6 (1-64)||(18276703-18276766)
chr6 (1-64)||(20897983-20898046)
chr6 (1-64)||(29451203-29451266)
chr6 (1-64)||(34477638-34477701)
chr6 (1-55)||(961053-961107)
chr6 (1-61)||(34851937-34851997)
chr6 (1-60)||(5323439-5323498)
chr6 (1-64)||(21878435-21878498)
chr6 (1-64)||(23402173-23402236)
chr6 (1-64)||(23629664-23629727)
chr6 (1-64)||(25165501-25165564)
chr6 (1-55)||(4215739-4215793)
chr6 (1-55)||(31280365-31280419)
chr6 (1-64)||(12525754-12525817)
chr6 (1-64)||(28225256-28225318)
chr6 (1-64)||(32929596-32929659)
chr6 (1-94)||(35043889-35043987)
chr6 (1-64)||(3026097-3026160)
chr6 (1-64)||(29978267-29978330)
chr6 (5-64)||(9661021-9661080)
[»] chr8 (45 HSPs)
chr8 (1-94)||(29235234-29235333)
chr8 (1-64)||(9537912-9537975)
chr8 (1-93)||(4648195-4648292)
chr8 (1-92)||(16888632-16888728)
chr8 (1-64)||(11112674-11112737)
chr8 (1-64)||(33357217-33357280)
chr8 (1-64)||(36730479-36730542)
chr8 (1-64)||(42035069-42035132)
chr8 (1-94)||(10870356-10870450)
chr8 (1-93)||(7304606-7304701)
chr8 (1-94)||(30675660-30675759)
chr8 (1-64)||(168501-168564)
chr8 (1-64)||(16890568-16890631)
chr8 (1-64)||(27988587-27988650)
chr8 (1-64)||(28045889-28045952)
chr8 (1-64)||(29444228-29444291)
chr8 (1-64)||(32113943-32114006)
chr8 (1-94)||(37373205-37373303)
chr8 (1-93)||(12203855-12203952)
chr8 (1-93)||(12448283-12448380)
chr8 (1-91)||(20831641-20831737)
chr8 (1-61)||(9278250-9278310)
chr8 (1-92)||(21595848-21595944)
chr8 (1-64)||(4537832-4537895)
chr8 (1-64)||(9063140-9063203)
chr8 (1-64)||(13643047-13643110)
chr8 (1-64)||(13743472-13743535)
chr8 (1-64)||(16785121-16785184)
chr8 (1-64)||(28626803-28626866)
chr8 (1-60)||(34192814-34192873)
chr8 (1-64)||(34228717-34228780)
chr8 (2-55)||(42433632-42433685)
chr8 (1-61)||(40831315-40831375)
chr8 (1-61)||(43119255-43119315)
chr8 (9-64)||(2805356-2805411)
chr8 (1-64)||(10618053-10618116)
chr8 (8-64)||(9253996-9254052)
chr8 (1-60)||(3930321-3930380)
chr8 (2-48)||(22451835-22451881)
chr8 (1-61)||(17467641-17467701)
chr8 (29-64)||(12652665-12652700)
chr8 (2-45)||(30933410-30933453)
chr8 (1-59)||(22956746-22956803)
chr8 (2-55)||(33124581-33124635)
chr8 (2-57)||(16196893-16196949)
[»] chr4 (44 HSPs)
chr4 (1-94)||(32202568-32202667)
chr4 (1-64)||(32217080-32217143)
chr4 (1-64)||(42898834-42898897)
chr4 (1-64)||(54655964-54656027)
chr4 (1-96)||(28755618-28755718)
chr4 (1-64)||(4220230-4220293)
chr4 (1-93)||(16536048-16536146)
chr4 (4-64)||(18067970-18068030)
chr4 (1-64)||(789618-789681)
chr4 (1-64)||(7768973-7769036)
chr4 (1-64)||(24679730-24679793)
chr4 (1-60)||(36395138-36395197)
chr4 (1-64)||(37987970-37988033)
chr4 (1-64)||(43202471-43202534)
chr4 (1-64)||(43944542-43944605)
chr4 (1-97)||(54897304-54897406)
chr4 (1-64)||(54945866-54945929)
chr4 (1-61)||(30154251-30154311)
chr4 (1-64)||(4089177-4089240)
chr4 (1-64)||(15186278-15186341)
chr4 (1-64)||(19503193-19503256)
chr4 (1-64)||(39843942-39844005)
chr4 (1-64)||(53655966-53656029)
chr4 (1-54)||(6164138-6164191)
chr4 (2-55)||(53268764-53268817)
chr4 (1-49)||(30387222-30387270)
chr4 (1-60)||(3783589-3783648)
chr4 (1-64)||(4268910-4268973)
chr4 (1-64)||(12356279-12356342)
chr4 (1-52)||(29591236-29591287)
chr4 (1-64)||(42815144-42815207)
chr4 (1-64)||(49915194-49915257)
chr4 (1-60)||(50619125-50619184)
chr4 (1-53)||(46688293-46688345)
chr4 (1-60)||(46148978-46149037)
chr4 (1-64)||(54054583-54054646)
chr4 (1-48)||(55882734-55882781)
chr4 (2-48)||(41265510-41265556)
chr4 (1-54)||(50603272-50603325)
chr4 (1-61)||(33108761-33108821)
chr4 (1-48)||(5091698-5091745)
chr4 (1-64)||(47231960-47232023)
chr4 (3-42)||(50167646-50167685)
chr4 (1-60)||(52533873-52533932)
[»] chr7 (44 HSPs)
chr7 (1-64)||(11686412-11686475)
chr7 (1-94)||(43594124-43594223)
chr7 (1-64)||(29993575-29993638)
chr7 (1-64)||(30810690-30810753)
chr7 (1-63)||(24798491-24798553)
chr7 (3-64)||(34546404-34546465)
chr7 (1-92)||(28587911-28588007)
chr7 (1-64)||(8754673-8754736)
chr7 (1-60)||(12218524-12218583)
chr7 (1-64)||(37631630-37631693)
chr7 (1-55)||(5239329-5239383)
chr7 (1-64)||(4100612-4100675)
chr7 (1-64)||(4628601-4628664)
chr7 (1-64)||(7689288-7689351)
chr7 (1-97)||(13064965-13065065)
chr7 (1-60)||(18117182-18117241)
chr7 (1-64)||(18485996-18486059)
chr7 (1-64)||(23363255-23363318)
chr7 (1-97)||(24438473-24438575)
chr7 (1-64)||(27456201-27456264)
chr7 (1-64)||(34333319-34333382)
chr7 (1-64)||(34606296-34606359)
chr7 (1-64)||(47083090-47083153)
chr7 (1-64)||(47657015-47657078)
chr7 (2-64)||(18220527-18220589)
chr7 (1-55)||(42044381-42044435)
chr7 (1-98)||(47839488-47839590)
chr7 (2-54)||(22739868-22739920)
chr7 (1-49)||(37674192-37674240)
chr7 (1-64)||(45045805-45045868)
chr7 (2-55)||(4087667-4087720)
chr7 (2-55)||(18220759-18220812)
chr7 (1-61)||(29835792-29835852)
chr7 (1-61)||(46716676-46716736)
chr7 (1-64)||(1737015-1737078)
chr7 (1-64)||(5729381-5729444)
chr7 (4-55)||(18470030-18470081)
chr7 (2-60)||(3021930-3021988)
chr7 (6-55)||(18220624-18220673)
chr7 (1-61)||(525163-525223)
chr7 (2-57)||(5785507-5785563)
chr7 (1-60)||(33636491-33636550)
chr7 (2-64)||(36437412-36437474)
chr7 (32-64)||(28262066-28262098)
[»] chr2 (35 HSPs)
chr2 (1-93)||(26891751-26891849)
chr2 (1-96)||(44587899-44588000)
chr2 (1-64)||(561606-561669)
chr2 (1-64)||(5093627-5093690)
chr2 (1-64)||(26387152-26387215)
chr2 (1-64)||(32860137-32860200)
chr2 (1-64)||(2898106-2898169)
chr2 (1-64)||(4381830-4381893)
chr2 (1-64)||(22567637-22567700)
chr2 (1-64)||(31390047-31390110)
chr2 (1-64)||(31438681-31438744)
chr2 (1-64)||(43637199-43637262)
chr2 (1-54)||(3668201-3668254)
chr2 (2-55)||(15079047-15079100)
chr2 (2-55)||(39531868-39531921)
chr2 (1-64)||(1859197-1859260)
chr2 (1-64)||(8969495-8969558)
chr2 (1-64)||(20552966-20553029)
chr2 (1-64)||(22887785-22887848)
chr2 (1-64)||(27584773-27584836)
chr2 (9-64)||(30486245-30486300)
chr2 (1-64)||(34442620-34442683)
chr2 (1-60)||(38590962-38591021)
chr2 (1-55)||(27856484-27856538)
chr2 (1-64)||(6580224-6580287)
chr2 (1-61)||(11021310-11021370)
chr2 (1-61)||(38296215-38296275)
chr2 (1-64)||(13574117-13574180)
chr2 (1-64)||(5881252-5881319)
chr2 (1-60)||(4022567-4022625)
chr2 (1-64)||(22068408-22068470)
chr2 (1-64)||(35851839-35851902)
chr2 (1-60)||(25782921-25782977)
chr2 (2-55)||(34123113-34123166)
chr2 (2-57)||(40210250-40210306)
[»] chr1 (53 HSPs)
chr1 (1-64)||(8473002-8473065)
chr1 (1-64)||(35985709-35985772)
chr1 (1-93)||(51065836-51065934)
chr1 (1-96)||(30294469-30294570)
chr1 (1-93)||(45431279-45431376)
chr1 (1-64)||(6770372-6770435)
chr1 (1-64)||(18043197-18043260)
chr1 (1-64)||(47010028-47010091)
chr1 (1-94)||(17333370-17333468)
chr1 (1-64)||(3097694-3097757)
chr1 (1-64)||(3784801-3784864)
chr1 (1-64)||(5694356-5694419)
chr1 (1-64)||(14350365-14350428)
chr1 (1-64)||(29210448-29210511)
chr1 (1-64)||(29657806-29657869)
chr1 (1-55)||(36446413-36446467)
chr1 (1-55)||(42770078-42770132)
chr1 (2-55)||(3838866-3838919)
chr1 (1-61)||(45449332-45449392)
chr1 (1-64)||(9266816-9266879)
chr1 (1-64)||(12072150-12072213)
chr1 (1-64)||(15227774-15227837)
chr1 (1-64)||(15282602-15282665)
chr1 (1-64)||(19031903-19031966)
chr1 (1-64)||(24178551-24178614)
chr1 (1-64)||(26228228-26228291)
chr1 (1-64)||(38162885-38162948)
chr1 (1-64)||(39497342-39497405)
chr1 (1-64)||(48071517-48071580)
chr1 (1-64)||(50128260-50128323)
chr1 (1-64)||(51368873-51368936)
chr1 (2-64)||(39912368-39912430)
chr1 (8-93)||(47532765-47532855)
chr1 (2-55)||(37315356-37315409)
chr1 (1-61)||(38335207-38335267)
chr1 (1-64)||(13961247-13961309)
chr1 (1-64)||(23473552-23473615)
chr1 (1-56)||(29683239-29683294)
chr1 (1-60)||(30657647-30657706)
chr1 (2-53)||(37503260-37503311)
chr1 (1-64)||(38702021-38702084)
chr1 (1-64)||(43286757-43286820)
chr1 (2-64)||(35700739-35700801)
chr1 (2-48)||(52431632-52431678)
chr1 (1-64)||(28481879-28481938)
chr1 (19-64)||(10976008-10976053)
chr1 (29-92)||(19011112-19011180)
chr1 (1-55)||(12306962-12307015)
chr1 (3-41)||(19011057-19011095)
chr1 (2-55)||(39081845-39081898)
chr1 (1-60)||(41730344-41730406)
chr1 (5-57)||(49867472-49867524)
chr1 (17-61)||(52749640-52749684)
[»] scaffold0045 (2 HSPs)
scaffold0045 (1-64)||(53434-53497)
scaffold0045 (1-61)||(50586-50646)
[»] scaffold0003 (1 HSPs)
scaffold0003 (4-64)||(53776-53836)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-64)||(7985-8048)
[»] scaffold0549 (1 HSPs)
scaffold0549 (1-64)||(7323-7386)
[»] scaffold0524 (1 HSPs)
scaffold0524 (1-64)||(860-923)
[»] scaffold1152 (1 HSPs)
scaffold1152 (1-61)||(716-776)
[»] scaffold0190 (1 HSPs)
scaffold0190 (1-94)||(14895-14994)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-61)||(116242-116302)
[»] scaffold0264 (1 HSPs)
scaffold0264 (1-64)||(22996-23059)
[»] scaffold0050 (2 HSPs)
scaffold0050 (1-64)||(69261-69324)
scaffold0050 (2-60)||(33770-33828)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-64)||(68378-68441)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-64)||(146993-147056)
[»] scaffold0206 (1 HSPs)
scaffold0206 (9-64)||(11066-11121)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-64)||(6198-6261)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-64)||(25754-25816)
[»] scaffold1266 (1 HSPs)
scaffold1266 (1-60)||(331-390)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-60)||(40958-41017)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-60)||(95672-95731)
[»] scaffold0533 (1 HSPs)
scaffold0533 (2-48)||(5090-5136)
[»] scaffold0325 (1 HSPs)
scaffold0325 (1-62)||(17559-17619)
[»] scaffold0263 (1 HSPs)
scaffold0263 (1-60)||(19673-19732)
[»] scaffold0425 (1 HSPs)
scaffold0425 (1-38)||(10771-10808)


Alignment Details
Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 10617372 - 10617472
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctttatc-----ccggggacaccggttagcatttcccaa 95  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||     |||||| ||||||||| ||||||||||    
T  10617372 attataaattaattacacaattttaatgcattaactactatataatttccttttttatatccttaatcagtgtccgggggcaccggttaacatttcccaa 10617471  T
Q  96 a 96  Q
    |    
T  10617472 a 10617472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4168281 - 4168218
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  4168281 attataaattaattacacaatttcaatacattaactactatataatttccttttttatatcctt 4168218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 272318 - 272255
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  272318 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 272255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 41554028 - 41554091
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  41554028 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 41554091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 53489912 - 53489975
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  53489912 attataaattaattacacaattttaatgcattaactactatataatttcctttttcataccctt 53489975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 39074517 - 39074413
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccca 94  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||      |  ||||||| |||||||||||||||||||    
T  39074517 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccca 39074418  T
Q  95 aatta 99  Q
     ||||    
T  39074417 tatta 39074413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 858687 - 858624
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  858687 attatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 858624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 40362668 - 40362731
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||    
T  40362668 attatcaattaattacacaattttaatgcattaactactatataatttcttttttcatatcctt 40362731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 52520779 - 52520716
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||    
T  52520779 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccctt 52520716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43786969 - 43786915
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  43786969 attataaattaattacacaatttcaatgcattaactactatataatttccttttt 43786915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2119529 - 2119469
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| |||||    
T  2119529 attataaattaattactcaatttcaatgcattaactactatataatttcctttttcatatc 2119469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31514889 - 31514829
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||    
T  31514889 attataaattaattacacaattttaatacattaactactatataattttatttttcatatc 31514829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7468509 - 7468446
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||| || |||||    
T  7468509 attataaattaattatacaatttcaatgcattaactactatataatttcctttttcatttcctt 7468446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13159995 - 13159932
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||    
T  13159995 attatcaattaattacacaatttcaatgtattaactactatataatttcctttttcatatcctt 13159932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 20924090 - 20924027
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||| ||||    
T  20924090 attataaattaattacacaatttcaatgaattaactactatataatttcctttttcataccctt 20924027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 22248984 - 22248921
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| || |||||||||||||||||||||||| ||||||||    
T  22248984 attatcaattaattacacaatttcaatacaataactactatataatttcctttttcatatcctt 22248921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29241735 - 29241672
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||||| |||| ||||||||    
T  29241735 attataaattaattacataatttcaatgcattaactactatataatttccattttcatatcctt 29241672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 42964337 - 42964400
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||||||||||| |||||| ||||| ||||||||    
T  42964337 attataaattaattacacaatttcaatgcattaactactataaaatttcatttttcatatcctt 42964400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 46352732 - 46352669
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| ||||||||||| ||||||||||||||| ||||||||    
T  46352732 attatcaattaattacacaatttcaatgcattaactactgtataatttcctttttcatatcctt 46352669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 48725369 - 48725306
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||||||    
T  48725369 attatcaattaattacacaatttcaatgcattaattactatataatttcctttttcatatcctt 48725306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 49893429 - 49893366
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||| |||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||||    
T  49893429 attatagattaattacacaatttcaatgcattaactattatataatttcctttttcatatcctt 49893366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2505447 - 2505387
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||| ||||||||||||||||| ||| || |||||||||||||||||||||||| |||||    
T  2505447 attatgaattaattacacaatttcaatgcactaactactatataatttcctttttcatatc 2505387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2938128 - 2938188
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||||||| ||||||||| | | |||||||||||||||||||| ||||||||||||    
T  2938128 attataaattaatcacacaatttcagtgcattaactactatataattttcttttttatatc 2938188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38852315 - 38852249
Alignment:
Q  1 attataaattaattacacaattttaatccatta---actactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||   |||||||||||||||| ||||||||||||||    
T  38852315 attataaattaattacacaatttcaatgcattaattactactatataatttcattttttatatcctt 38852249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42548193 - 42548133
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||| ||||| |||||    
T  42548193 attataaattaattacataatttcaatgcattaactactatataatttcttttttcatatc 42548133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50299033 - 50299093
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||||||||||||||||| | | |||||||||||||||||||| | ||||||||||    
T  50299033 attataaattaattacacaatttcagtgcattaactactatataattttcctttttatatc 50299093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 18014762 - 18014707
Alignment:
Q  9 ttaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||    
T  18014762 ttaattacacaatttcaatgcattaactactatataatttactttttcatatcctt 18014707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28139407 - 28139344
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| ||||||| ||| ||||||||||||| ||||||| ||||| ||||||||    
T  28139407 attataaattaattatacaatttcaatgcattaactactatttaatttcttttttcatatcctt 28139344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 41993707 - 41993766
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||| ||||| ||||    
T  41993707 attataaattaattacataatttcaatgcattaactactatataatttcatttttaatat 41993766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43269827 - 43269890
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| ||| ||||||||||||| |||||||| |||| ||||||||    
T  43269827 attataaattaattacataatttcaatgcattaactactatgtaatttcccttttcatatcctt 43269890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 52246680 - 52246617
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| ||||||| ||| ||||||| ||||||||||||| ||||| ||||||||    
T  52246680 attataaattaattatacaatttcaatgcattaacaactatataatttcatttttcatatcctt 52246617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 52718252 - 52718202
Alignment:
Q  14 tacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||  |||||||||||||||||||||||||| ||||||||    
T  52718252 tacacaattttaatgtattaactactatataatttcctttttcatatcctt 52718202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33140983 - 33140937
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatt 47  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  33140983 attataaattaattatacaatttcaatgcattaactactatataatt 33140937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 50395650 - 50395711
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcc 62  Q
    ||||| |||||||||||||||||  || ||||||||||| |||||||| |||||| ||||||    
T  50395650 attatcaattaattacacaatttctatgcattaactactgtataattttctttttcatatcc 50395711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 21010092 - 21010039
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttcctttttta 57  Q
    |||||||||||||| ||||||| |||   |||||||||||||||||||||||||||    
T  21010092 ttataaattaattatacaatttcaatg--ttaactactatataatttcctttttta 21010039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 23925359 - 23925319
Alignment:
Q  20 attttaatccattaactactatataatttccttttttatat 60  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  23925359 attttaatgcattaattactatataatttccttttttatat 23925319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24488464 - 24488408
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttcctttttta 57  Q
    ||||| |||||||||||| ||||  || ||||||||| |||||||||||||||||||    
T  24488464 attatcaattaattacactatttccatgcattaactattatataatttcctttttta 24488408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 25743908 - 25743852
Alignment:
Q  2 ttataaattaattacacaatttt-aatccattaactactatataatttcctttttta 57  Q
    |||| |||||||||||||||||| ||| || ||| ||||||||||||||||||||||    
T  25743908 ttatgaattaattacacaatttttaatgcaataattactatataatttcctttttta 25743852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41304101 - 41304040
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| |||||||||||  |||| ||| |||||| |||||||||||||||||||| ||||||||    
T  41304101 attatcaattaattaca--atttcaatgcattaattactatataatttcctttttcatatcctt 41304040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 49529354 - 49529420
Alignment:
Q  1 attataaattaattacacaattttaatccattaactac---tatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| ||| ||||||||||   |||||||||| |||||| ||||||||    
T  49529354 attataaattaattacataatttcaatgcattaactactagtatataattttctttttcatatcctt 49529420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11308298 - 11308361
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| |||||||||||  |||| ||| ||||||||| ||||||||||||||||| | ||||||    
T  11308298 attatcaattaattacattatttcaatgcattaactattatataatttcctttttcacatcctt 11308361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 50359274 - 50359321
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataattt 48  Q
    |||||| ||||||||| |||||| ||| ||||||||||||||||||||    
T  50359274 attatatattaattacccaatttcaatgcattaactactatataattt 50359321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 2391688 - 2391642
Alignment:
Q  18 caattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||| ||| |||||||||||||||||||||||||||  |||||||    
T  2391688 caatttcaatgcattaactactatataatttcctttttcttatcctt 2391642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 2393449 - 2393403
Alignment:
Q  18 caattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||| ||| |||||||||||||||||||||||||||  |||||||    
T  2393449 caatttcaatgcattaactactatataatttcctttttcttatcctt 2393403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 16990728 - 16990778
Alignment:
Q  8 attaattacacaattttaatccattaactactatataatttccttttttat 58  Q
    |||||||||||| ||||||| || |||||| ||| ||||||||||||||||    
T  16990728 attaattacacatttttaatgcaataactattatctaatttccttttttat 16990778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 6842641 - 6842604
Alignment:
Q  1 attataaattaattacacaattttaatccattaactac 38  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  6842641 attataaattaattacacaatttcaatgcattaactac 6842604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6842717 - 6842676
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactata 42  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||    
T  6842717 attataaattaattacacaatttcaatgcattaactattata 6842676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 21547482 - 21547581
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatccttta-----tcccggggacaccggttagcatttcccaa 95  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |      ||||||||||||||||||||||||||||    
T  21547482 attataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccgatgcccggggacaccggttagcatttcccaa 21547581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 35504328 - 35504429
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccca 94  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||      | |||||||| |||||||||||||||||||    
T  35504328 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgtcccgggggcaccggttagcatttccca 35504427  T
Q  95 aa 96  Q
    ||    
T  35504428 aa 35504429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 11846170 - 11846075
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcattt 90  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||      | |||||||||||||| |||||||||    
T  11846170 attataaattaattacacaatttcaatgtattaactactatataatttccttttttatatccttagctagtgtcccggggacaccgcttagcattt 11846075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 34650921 - 34651020
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatccttta-----tcccggggacaccggttagcatttcccaa 95  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| |||| |      ||||||| ||||||||||||||||||||    
T  34650921 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttcccaa 34651020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 35132620 - 35132522
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccc 93  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||      | |||||||| ||||||||||||||||||    
T  35132620 attataaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttccc 35132522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 8787437 - 8787339
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccc 93  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||| ||||      |  ||||||||||||||||||||||||||    
T  8787437 attataaattaattacacaatttcaatgcattaactactatataatttcatttttcatacccttaaccaatgccccggggacaccggttagcatttccc 8787339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13661906 - 13661843
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  13661906 attatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 13661843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20175325 - 20175266
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||    
T  20175325 attataaattaattacacaatttcaatgcattaactactatataatttctttttttatat 20175266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 40564492 - 40564555
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||    
T  40564492 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcaaatcctt 40564555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12506394 - 12506340
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  12506394 attataaattaattacacaatttcaatgcattaactactatataatttccttttt 12506340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 10070060 - 10069968
Alignment:
Q  8 attaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccca 94  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||      |  ||||||| |||||||||||||||||||    
T  10070060 attaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccca 10069968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 11958055 - 11958155
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat------cctttatcccggggacaccggttagcatttccca 94  Q
    ||||| ||||||||||||||||| | | ||||||||||||||||||||||||||||||||      ||| |  ||||||| |||||||||||||||||||    
T  11958055 attatcaattaattacacaatttcattgcattaactactatataatttccttttttatatctttaacctgtgccccgggggcaccggttagcatttccca 11958154  T
Q  95 a 95  Q
    |    
T  11958155 a 11958155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 2619645 - 2619708
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||| |||||| ||||||||    
T  2619645 attataaattaattacacaatttcaatacattaactactaaataattttctttttcatatcctt 2619708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4837355 - 4837296
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||    
T  4837355 attataaattaattacacaatttcaatgcattaattactatataatttcctttttcatat 4837296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19647746 - 19647809
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||| ||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  19647746 attatcaattaattatacaatttcaatgcattaactactatataatttcctttttcatatcctt 19647809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 31909729 - 31909666
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||||||| |||| ||||||||    
T  31909729 attataaatcaattacacaatttcaatgcattaactactatataatttcccttttaatatcctt 31909666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 9721695 - 9721794
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccca 94  Q
    ||||||||||||||| ||||||| ||| |||||| |||||||||||||||||||| |||| |||      || |||| |||||||||||| |||||||||    
T  9721695 attataaattaattaaacaatttcaatgcattaattactatataatttcctttttcatattcttaaccagtagcccgaggacaccggttaacatttccca 9721794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 39069469 - 39069425
Alignment:
Q  10 taattacacaattttaatccattaactactatataatttcctttt 54  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  39069469 taattacacaattttaatgcattaactactatataatttcctttt 39069425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10054440 - 10054503
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||| || ||||||||||||||||| ||| ||||    
T  10054440 attataaattaattacacaatttcaatgcattaattattatataatttcctttttcataccctt 10054503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13470249 - 13470186
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| ||||||| ||| |||| |||||||||| ||||||||||| ||||||||    
T  13470249 attataaattaattatacaatttcaatgcattgactactatattatttcctttttcatatcctt 13470186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40057405 - 40057342
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| || |||| ||| || |||||||||||||||||||||||| ||||||||    
T  40057405 attataaattaattatactatttcaatgcactaactactatataatttcctttttcatatcctt 40057342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 6284892 - 6284830
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||||||||| ||||||| ||| |||||| ||||||||||||||||||||  |||||||    
T  6284892 ttataaattaattatacaatttcaatacattaattactatataatttcctttttagtatcctt 6284830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 19436926 - 19436987
Alignment:
Q  3 tataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||| ||||||| ||| | ||||| ||||||||||||||||||| ||||||||    
T  19436926 tataaattaattatacaatttcaatgctttaaccactatataatttcctttttcatatcctt 19436987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6283660 - 6283600
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||||||||||||||||| ||| |||||| || |||||||||| |||||| |||||    
T  6283660 attataaattaattacacaatttcaatgcattaattattatataattttctttttcatatc 6283600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 4268659 - 4268620
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactat 41  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  4268659 ttataaattaattacacaattttaatgcattaactactat 4268620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 22973780 - 22973727
Alignment:
Q  4 ataaattaattacacaattttaatccattaactactatataatttcctttttta 57  Q
    |||||||||||||||||||||||| |||||  |||||||||| |||||| ||||    
T  22973780 ataaattaattacacaattttaattcattagttactatataacttccttattta 22973727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 5302368 - 5302424
Alignment:
Q  2 ttataaattaattacacaatttt-aatccattaactactatataatttcctttttta 57  Q
    ||||| ||||||||||||||||| ||| || |||||| ||||||||||| |||||||    
T  5302368 ttatagattaattacacaattttcaatacaataactattatataatttcttttttta 5302424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 10956048 - 10955997
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttcctttt 54  Q
    |||||||||||||| ||||||| ||| ||||||||||| ||||||| ||||||    
T  10956048 ttataaattaatta-acaatttcaatgcattaactactttataattccctttt 10955997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39067023 - 39067087
Alignment:
Q  1 attataaattaattacacaattttaatccattaact-actatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| |||  ||||||| | ||||||||||| ||||| ||||||||    
T  39067023 attataaattaattacataatttcaatatattaactaattatataatttcttttttcatatcctt 39067087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 10964901 - 10964961
Alignment:
Q  94 aaattaacctcatcctcatggttgaacttataggataacattgttcaatgttagtaccatt 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10964901 aaattaacctcatcctcatggttgaacttataggataacattgttcaatgttagtaccatt 10964961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 32985281 - 32985344
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  32985281 attataaattaattacacaatttcaatacattaactactatataatttccttttttatatcctt 32985344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 250
Target Start/End: Original strand, 10964720 - 10964873
Alignment:
Q  94 aaattaacctcatcctcatggttgaacttataggataacattgttcaatgttagtaccatttttcctagttgcctaacttttggacaagttcttctcttg 193  Q
    |||||||||| ||||||| |||| ||||||  | ||||||||||| ||||||||| |||||||||||| ||| || ||||||||  |||||| || ||||    
T  10964720 aaattaacctgatcctcaaggtt-aactta--gtataacattgttgaatgttagttccatttttcctaattgtctcacttttgggtaagttc-tcccttg 10964815  T
Q  194 ggttaataattgagaaacatgcactataccattga-tttctaaacagttatcaatttt 250  Q
    |||||||||||||| ||| | |||| ||||  ||| ||||||||||||||||||||||    
T  10964816 ggttaataattgagtaacgttcactttacctctgattttctaaacagttatcaatttt 10964873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2350750 - 2350687
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  2350750 attataaattaattacacaatttcaatacattaactactatataatttcctttttcatatcctt 2350687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 12145205 - 12145268
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  12145205 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 12145268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26467212 - 26467275
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  26467212 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 26467275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34396615 - 34396678
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  34396615 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 34396678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 392194 - 392095
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccca 94  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||      |  ||||||| |||||||||||||||||||    
T  392194 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccca 392095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2581050 - 2580990
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  2581050 attataaattaattacataatttcaatgcattaactactatataatttccttttttatatc 2580990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 27433587 - 27433527
Alignment:
Q  4 ataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  27433587 ataaattaattacacaattttaatgcattaactactatataatttcctttttcataccctt 27433527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1391266 - 1391329
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  1391266 attataaattaattatacaatttcaatgcattaactactatataatttcctttttcatatcctt 1391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1840335 - 1840398
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||||||| |||||| || ||||||||||| ||||||||||||||    
T  1840335 attataaattaattacacaattttaatacattaattattatataatttctttttttatatcctt 1840398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3515864 - 3515801
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||    
T  3515864 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccctt 3515801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7851247 - 7851310
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||| |||||| ||||||||    
T  7851247 attataaattaattacacaattttaatgcattaattactatataattttctttttcatatcctt 7851310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11115183 - 11115246
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| |||  |||||||| ||||||||||||||||||||||||||    
T  11115183 attataaattaattacacaatttcaatgtattaactattatataatttccttttttatatcctt 11115246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 13417050 - 13417113
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||||    
T  13417050 attataaattaattacacaatttcaatacattaactaatatataatttcctttttcatatcctt 13417113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13529553 - 13529490
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||    
T  13529553 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcacatcctt 13529490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 18276703 - 18276766
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||||||||||| ||||||||    
T  18276703 attataaattaattacacaaattcaatgcattaactactatataatttcctttttcatatcctt 18276766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 20898046 - 20897983
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  20898046 attatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 20897983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29451203 - 29451266
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  29451203 attataatttaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 29451266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34477638 - 34477701
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  34477638 attatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 34477701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 961107 - 961053
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  961107 attatcaattaattacacaattttaatgcattaactactatataatttccttttt 961053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34851937 - 34851997
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| |||||    
T  34851937 attataaatcaattacacaatttcaatgcattaactactatataatttcctttttcatatc 34851997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 5323498 - 5323439
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||||||||||||||| ||||||||| | |||| |||||||||||||||||||||||||    
T  5323498 attataaattaattacataattttaatgctttaattactatataatttccttttttatat 5323439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 21878435 - 21878498
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| | ||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  21878435 attataaattaattaaataatttcaatgcattaactactatataatttcctttttcatatcctt 21878498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 23402236 - 23402173
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||||||||| |||||||| ||| |||||| |||||||||||||||||||| ||||||||    
T  23402236 attataaattaatttcacaatttcaatgcattaattactatataatttcctttttcatatcctt 23402173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23629664 - 23629727
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||    
T  23629664 attataaagtaattacacaatttcaatacattaactactatataattttctttttcatatcctt 23629727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 25165501 - 25165564
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||| ||||| ||||||||    
T  25165501 attataaattaattacacaatttcaatatattaactactatataatttcttttttcatatcctt 25165564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4215793 - 4215739
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  4215793 attataaattaattacacaatttcaatgcattaactattatataatttccttttt 4215739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31280419 - 31280365
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||    
T  31280419 attataaattaattatacaatttcaatgcattaactactatataatttccttttt 31280365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12525817 - 12525754
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||| ||| |||  |||||||||||||||||||||||||| ||| ||||    
T  12525817 attataaattaattacacattttcaatgtattaactactatataatttcctttttcataccctt 12525754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28225318 - 28225256
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||| ||||||||| ||||||||    
T  28225318 attataaattaattacacaatttcaatacattaattactatataa-ttcctttttcatatcctt 28225256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 32929596 - 32929659
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||| || ||||||||||||||||| ||| ||||    
T  32929596 attataaattaattacacaatttcaatgcattaattaatatataatttcctttttcataccctt 32929659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 35043987 - 35043889
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccca 94  Q
    ||||||||||||| ||||||||| |||  |||||||||||||||||||| ||||| ||||||||      | ||||| ||||||| ||||||||||||||    
T  35043987 attataaattaat-acacaatttcaatgaattaactactatataatttcttttttcatatccttaaccagtgtcccgtggacaccagttagcatttccca 35043889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3026097 - 3026160
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| ||||||| ||| ||||||||||| ||||||||| ||||| ||| ||||    
T  3026097 attataaattaattatacaatttcaatgcattaactactgtataatttcatttttcataccctt 3026160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29978330 - 29978267
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||||  |||||| ||||| ||| |||||| |||||||||||||||||||| ||||||||    
T  29978330 attataaatatattacataatttcaatacattaaatactatataatttcctttttcatatcctt 29978267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 9661080 - 9661021
Alignment:
Q  5 taaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||| ||||||| ||| ||||||||| ||| ||||||| ||||| ||||||||    
T  9661080 taaattaattatacaatttcaatgcattaactattatgtaatttcttttttcatatcctt 9661021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 29235333 - 29235234
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctttatc------ccggggacaccggttagcatttccca 94  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||| |||      ||||| ||||||||||||||||||||    
T  29235333 attataaattaattacacaaatttaatgcattaactactatataatttctttttttatatccttaatcaatgctccgggaacaccggttagcatttccca 29235234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9537912 - 9537975
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  9537912 attataaattaattacacaattttaatgcattaactactatataatttcctttttcatatcctt 9537975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 4648292 - 4648195
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctttat-----cccggggacaccggttagcatttccc 93  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||| |||||||| ||     ||| ||||||||||||||||||||||    
T  4648292 attataaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaatcagtgccccgggacaccggttagcatttccc 4648195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 16888632 - 16888728
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatccttta-----tcccggggacaccggttagcatttcc 92  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||| |      ||||||| |||||||||||||||||    
T  16888632 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacctgtgcccgggggcaccggttagcatttcc 16888728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 11112737 - 11112674
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  11112737 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 11112674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33357217 - 33357280
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  33357217 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 33357280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36730542 - 36730479
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  36730542 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 36730479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 42035069 - 42035132
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  42035069 attataaattaattacacaatttcaatacattaactactatataatttcctttttcatatcctt 42035132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 10870450 - 10870356
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctttatc-ccggggacaccggttagcatttccca 94  Q
    ||||||||||||||||||||||| |||  |||||||| |||||||||| |||||||||||| || | | ||||||| ||||||||||||||||||    
T  10870450 attataaattaattacacaatttcaatgtattaactattatataattttcttttttatatcattaaccaccggggataccggttagcatttccca 10870356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 7304606 - 7304701
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt---tatcccggggacaccggttagcatttccc 93  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||   | || | ||||||||||||| ||||||||    
T  7304606 attataaattaattacacaatttcaatgcattaactactatataattttctttttcatatccttaagtgtctcagggacaccggttaacatttccc 7304701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 30675660 - 30675759
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccca 94  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||      |  ||||||| |||||||||||||||||||    
T  30675660 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccca 30675759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 168564 - 168501
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||    
T  168564 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccctt 168501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16890568 - 16890631
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  16890568 attatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 16890631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 27988587 - 27988650
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||||    
T  27988587 attataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatcctt 27988650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28045889 - 28045952
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||||    
T  28045889 attataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatcctt 28045952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29444228 - 29444291
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||| ||||||||    
T  29444228 attataaattaattacacaatttcaatgcgttaactactatataatttcctttttcatatcctt 29444291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32114006 - 32113943
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  32114006 attataaattaattaaacaatttcaatgcattaactactatataatttcctttttcatatcctt 32113943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 37373303 - 37373205
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctttatc-----ccggggacaccggttagcatttccca 94  Q
    ||||| ||||||||||||||||| ||| ||||||||| ||||||||||||||||| |||||||| | |     |||||| |||||||||||||||||||    
T  37373303 attatcaattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgtccgggggcaccggttagcatttccca 37373205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 12203952 - 12203855
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatccttta-----tcccggggacaccggttagcatttccc 93  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||| |||| |      ||||||| ||||||||||||||||||    
T  12203952 attataaattaattacacaatttcaatgcattaactactatataatttcttttttcatacccttaaccggtacccgggggcaccggttagcatttccc 12203855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 12448380 - 12448283
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatccttta-----tcccggggacaccggttagcatttccc 93  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||| |||| |      ||||||| ||||||||||||||||||    
T  12448380 attataaattaattacacaatttcaatgcattaactactatataatttcttttttcatacccttaaccggtacccgggggcaccggttagcatttccc 12448283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 20831641 - 20831737
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttc 91  Q
    ||||||||||||||| || |||| ||| ||||||||||||||||||||||||||| ||||||||      | |||||||| ||||||||||||||||    
T  20831641 attataaattaattatactatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttc 20831737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9278310 - 9278250
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| |||||    
T  9278310 attataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatc 9278250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 21595944 - 21595848
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatccttta-----tcccggggacaccggttagcatttcc 92  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| ||| |||| |      ||||||| |||||||||||||||||    
T  21595944 attataaattaattacacaatttcaatgcattaactcctatataatttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttcc 21595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4537832 - 4537895
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  4537832 attatcaattaattacataatttcaatgcattaactactatataatttcctattttatatcctt 4537895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9063140 - 9063203
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||||||||| ||| |||| ||| ||||||||||||||||||||||||||| ||||||||    
T  9063140 attataaattaattgcacgatttcaatgcattaactactatataatttcctttttcatatcctt 9063203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13643110 - 13643047
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||  |||||||    
T  13643110 attataaattaattacataatttcaatgcattaactactatataatttcctttttcgtatcctt 13643047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13743535 - 13743472
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||  |||||||    
T  13743535 attataaattaattacataatttcaatgcattaactactatataatttcctttttcgtatcctt 13743472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16785184 - 16785121
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||| ||||| ||||||||    
T  16785184 attataaattaattacacaatttcaatacattaactgctatataatttcttttttcatatcctt 16785121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28626866 - 28626803
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | ||||||    
T  28626866 attataaattaatcacacaatttcaatacattaactactatataatttcctttttcacatcctt 28626803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34192873 - 34192814
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||    
T  34192873 attataaattaattacacaatttcaatgcattaactagtatataatttcctttttcatat 34192814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34228780 - 34228717
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||||||    
T  34228780 attatcaattaattacacaatttcaatgcattaattactatataatttcctttttcatatcctt 34228717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 42433632 - 42433685
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  42433632 ttataaattaattacacaatttcaatgcattaactattatataatttccttttt 42433685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 40831375 - 40831315
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||| |||||    
T  40831375 attataaattaattatacaatttcaatgcattaactactatataattttctttttcatatc 40831315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 43119315 - 43119255
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||| |||||    
T  43119315 attataaattaattatacaatttcaatgcattaactactatataattttctttttcatatc 43119255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 2805356 - 2805411
Alignment:
Q  9 ttaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||||    
T  2805356 ttaattacacaatttcaatgcattaactattatataatttcctttttcatatcctt 2805411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10618116 - 10618053
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| | | |||||||||||||||||||| |||||| ||||||||    
T  10618116 attatcaattaattacacaatttaattgcattaactactatataattttctttttcatatcctt 10618053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 9253996 - 9254052
Alignment:
Q  8 attaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||||||||||| ||| |||||||||||||| |||||| ||||| ||||||||    
T  9253996 attaattacacaatttcaatgcattaactactataaaatttcatttttcatatcctt 9254052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3930321 - 3930380
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||| |||||||||||||| || ||| ||||||||||||||||||||||| ||| ||||    
T  3930321 attatcaattaattacacaacttcaatgcattaactactatataatttcctctttcatat 3930380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 22451881 - 22451835
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataattt 48  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||    
T  22451881 ttataaattaattacacaatttcaatgcattaactgctatataattt 22451835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17467701 - 17467641
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||| ||||||||||||||||| ||| |||||| ||||  |||||||||||||| |||||    
T  17467701 attatcaattaattacacaatttcaatgcattaattactgcataatttcctttttcatatc 17467641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 12652700 - 12652665
Alignment:
Q  29 cattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||||||| ||||||||    
T  12652700 cattaactactatataatttcctttttcatatcctt 12652665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 30933410 - 30933453
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataa 45  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||    
T  30933410 ttataaattaattacacaatttcaatgcattaattactatataa 30933453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22956803 - 22956746
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttata 59  Q
    ||||||||||||||||| |||||||||  ||||||||| |||| | |||||||||||||    
T  22956803 attataaattaattacataattttaatgtattaactaccatatga-ttccttttttata 22956746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 33124581 - 33124635
Alignment:
Q  2 ttataaattaattacacaatttt-aatccattaactactatataatttccttttt 55  Q
    ||||||||| ||||||||||||| ||| || |||||||||||||| |||||||||    
T  33124581 ttataaattgattacacaattttcaatgcaataactactatataacttccttttt 33124635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 16196893 - 16196949
Alignment:
Q  2 ttataaattaattacacaatttt-aatccattaactactatataatttcctttttta 57  Q
    ||||||||||||||||||||||| |||  | |||||| |||||||||| ||||||||    
T  16196893 ttataaattaattacacaattttcaatataataactattatataattttctttttta 16196949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 7e-24; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 32202568 - 32202667
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccca 94  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||      |  ||||||||||||||||| |||||||||    
T  32202568 attataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaacccgtgccccggggacaccggttaacatttccca 32202667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32217143 - 32217080
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  32217143 attataaattaattacacaatttcaatgcattaactactatataatttccttttttatatcctt 32217080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 42898834 - 42898897
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  42898834 attataaattaattacacaatttcaatgcattaactactatataatttccttttttatatcctt 42898897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 54655964 - 54656027
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  54655964 attataaattaattacacaatttcaatacattaactactatataatttccttttttatatcctt 54656027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 28755718 - 28755618
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatccttta-----tcccggggacaccggttagcatttcccaa 95  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||| |      ||| ||||||||||||||||||||||||    
T  28755718 attatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccctgggacaccggttagcatttcccaa 28755619  T
Q  96 a 96  Q
    |    
T  28755618 a 28755618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4220293 - 4220230
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  4220293 attataaattaattacacaatttcaatacattaactactatataatttcctttttcatatcctt 4220230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 16536146 - 16536048
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctttat------cccggggacaccggttagcatttccc 93  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| |||| ||      ||||||| ||||||||||||||||||    
T  16536146 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaatccgtgccccgggggcaccggttagcatttccc 16536048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 18067970 - 18068030
Alignment:
Q  4 ataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  18067970 ataaattaattacacaattttaatgcattaactactatataatttcctttttcataccctt 18068030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 789618 - 789681
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||    
T  789618 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccctt 789681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7769036 - 7768973
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||    
T  7769036 attataaattaattacacaatttcaatacattaactactatataatttcctttttcataccctt 7768973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 24679730 - 24679793
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||    
T  24679730 attataaattaattacacaatttcaatacattaactactatataatttcttttttcatatcctt 24679793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36395197 - 36395138
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  36395197 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatat 36395138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 37988033 - 37987970
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||    
T  37988033 attataaattaattacacaatttcaatacattaactactatataatttcctttttcataccctt 37987970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43202471 - 43202534
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| ||||    
T  43202471 attataaattaattacacaattttaatgcattaattactatataatttcctttttcataccctt 43202534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 43944605 - 43944542
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||    
T  43944605 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccctt 43944542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 54897406 - 54897304
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccca 94  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||| | ||||||||      |  ||||||| |||||||||||||||||||    
T  54897406 attataaattaattatacaatttcaatgcattaactactatataatttcctttctcatatccttaaccagtgccccgggggcaccggttagcatttccca 54897307  T
Q  95 aat 97  Q
    |||    
T  54897306 aat 54897304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 54945866 - 54945929
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| ||||||||    
T  54945866 attataaattaattacacaatttcaatacattaactgctatataatttcctttttcatatcctt 54945929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30154251 - 30154311
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| |||||    
T  30154251 attataaattaattacataatttcaatacattaactactatataatttcctttttcatatc 30154311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4089240 - 4089177
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| |||||| ||| ||||    
T  4089240 attataaattaattacacaatttcaatgcattaactactatataattttctttttcataccctt 4089177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 15186341 - 15186278
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||| ||||    
T  15186341 attataaattaattacacaatttcaatggattaactactatataatttcctttttcataccctt 15186278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19503193 - 19503256
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| |||  |||||||| ||||||||||||||||| ||||||||    
T  19503193 attataaattaattacacaatttcaatgtattaactagtatataatttcctttttcatatcctt 19503256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 39844005 - 39843942
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||| ||||| ||||||||    
T  39844005 attataaattaattacataatttcaatgcattaactactatataatttcatttttcatatcctt 39843942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 53655966 - 53656029
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||| ||||| ||||||||    
T  53655966 attataaattaattacacaatttcaatacattaactattatataatttcttttttcatatcctt 53656029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6164191 - 6164138
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttcctttt 54  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| |||||    
T  6164191 attataaattaattacacaatttcaatgcattaactactatataattttctttt 6164138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 53268817 - 53268764
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  53268817 ttataaattaattacacaattttaatgcattaactaatatataatttctttttt 53268764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30387222 - 30387270
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttc 49  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  30387222 attataaattaattacacaatttcaatgcattaactactatataatttc 30387270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3783589 - 3783648
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||||| ||||| ||||    
T  3783589 attatcaattaattaaacaattttaatgcattaactactatataatttcatttttcatat 3783648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4268910 - 4268973
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||| |||||||||| ||| ||||    
T  4268910 attataaattaattacataatttcaatgcattaactactatatagtttcctttttcataccctt 4268973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12356342 - 12356279
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| | ||||| |||  |||||||||||||||||||||||||| ||||||||    
T  12356342 attataaattaattatataatttcaatgtattaactactatataatttcctttttcatatcctt 12356279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29591287 - 29591236
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttcctt 52  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  29591287 attataaattaagtacacaatttcaatgcattaactactatataatttcctt 29591236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 42815207 - 42815144
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| ||| |||||||||  |||||||||||||||| ||||||||    
T  42815207 attataaattaattacataatttcaatacattaactatgatataatttcctttttcatatcctt 42815144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 49915257 - 49915194
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||| || |||||| ||||||||    
T  49915257 attataaattaattacacaatttcaatacattaattactatataaatttctttttcatatcctt 49915194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 50619184 - 50619125
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    |||||||||||| |||||||||| ||| |||||||||||||||||||| |||||| ||||    
T  50619184 attataaattaagtacacaatttcaatgcattaactactatataattttctttttcatat 50619125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 46688293 - 46688345
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttt 53  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||    
T  46688293 attataaattaattacacaatttcaatgcattaactactgtataattttcttt 46688345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 46149037 - 46148978
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||||||||||||||||||||| |||  ||||| || ||||||||||||||||| ||||    
T  46149037 attataaattaattacacaatttcaatgtattaattattatataatttcctttttcatat 46148978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 54054646 - 54054583
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| |||||||||||| |||| ||| ||||||||| ||||||||||| ||||| ||||||||    
T  54054646 attatcaattaattacactatttcaatgcattaactattatataatttcttttttcatatcctt 54054583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 55882781 - 55882734
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataattt 48  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||    
T  55882781 attataaattaattacacaatttcaatgcattaattactatataattt 55882734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 41265556 - 41265510
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataattt 48  Q
    |||||||||||||||||||||| | | ||||||||||||||||||||    
T  41265556 ttataaattaattacacaatttcactgcattaactactatataattt 41265510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50603325 - 50603272
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttcctttt 54  Q
    ||||||||||||||||||||||| ||| |||||| || |||| |||||||||||    
T  50603325 attataaattaattacacaatttcaatgcattaattattatacaatttcctttt 50603272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33108761 - 33108821
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||| ||||||||| || |||| ||| ||||||||| ||||||||||||||||| |||||    
T  33108761 attatcaattaattatactatttcaatgcattaactattatataatttcctttttcatatc 33108821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 5091698 - 5091745
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataattt 48  Q
    |||||||||||||||||||||||||||  ||||| || ||||||||||    
T  5091698 attataaattaattacacaattttaatatattaattattatataattt 5091745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 47231960 - 47232023
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| |||||||||||  |||| ||| ||||||||| ||||||||||||||||| | ||||||    
T  47231960 attatcaattaattacattatttcaatgcattaactattatataatttcctttttcacatcctt 47232023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 50167685 - 50167646
Alignment:
Q  3 tataaattaattacacaattttaatccattaactactata 42  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  50167685 tataaattaattacacaatttcaatgcattaactactata 50167646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 52533873 - 52533932
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||| |||||||||  |||||| | | ||||||||||||||||||||||||||| ||||    
T  52533873 attatcaattaattattcaatttcagtgcattaactactatataatttcctttttcatat 52533932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11686412 - 11686475
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  11686412 attataaattaattacacaatttcaatgcattaactactatataatttccttttttatatcctt 11686475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 43594124 - 43594223
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccca 94  Q
    ||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||      | | ||||||||||||||||||||||||||    
T  43594124 attataaattaattatacaatttcaatgcattaactattatataatttccttttttatatccttaaccagtgttccggggacaccggttagcatttccca 43594223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29993575 - 29993638
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  29993575 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 29993638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 30810753 - 30810690
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  30810753 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 30810690  T

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Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24798491 - 24798553
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcct 63  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||    
T  24798491 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcct 24798553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 34546404 - 34546465
Alignment:
Q  3 tataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  34546404 tataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 34546465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 28588007 - 28587911
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctttatc-----ccggggacaccggttagcatttcc 92  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||||||||| |||||||| | |     |||||| |||||||||||||||||    
T  28588007 attataaattaattacacaatttcaatacattgactactatataatttcctttttcatatccttaaccagtgtccgggggcaccggttagcatttcc 28587911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 8754673 - 8754736
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||    
T  8754673 attataaattaattacacaatttcaatgcattaactactatataatttcatttttcatatcctt 8754736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12218524 - 12218583
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  12218524 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatat 12218583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37631630 - 37631693
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||||||| |||||| || ||||||||||||||||||||||||||    
T  37631630 attataaattaattacataattttaatgcattaattattatataatttccttttttatatcctt 37631693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5239383 - 5239329
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  5239383 attataaattaattacacaatttcaatgcattaactactatataatttccttttt 5239329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4100612 - 4100675
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||| ||| ||||||||| |||||| |||||||||||||||||||| ||||||||    
T  4100612 attataaattaataacataattttaatacattaattactatataatttcctttttcatatcctt 4100675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4628664 - 4628601
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| ||||||| |||  |||||||||||||||||||||||||| ||||||||    
T  4628664 attataaattaattaaacaatttcaatgtattaactactatataatttcctttttcatatcctt 4628601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7689288 - 7689351
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||| |||| || |||||||||||||||||||||    
T  7689288 attataaattaattacacaatttcaatgcattaattactgtaaaatttccttttttatatcctt 7689351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 13064965 - 13065065
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt----tatcccggggacaccggttagcatttcccaaa 96  Q
    |||||||||||||||||||| || ||| |||||| || ||||||||||||||||| ||||||||     || ||| || |||||||||||||||||||||    
T  13064965 attataaattaattacacaaattcaatacattaaatattatataatttcctttttcatatccttaaccaataccgtgggcaccggttagcatttcccaaa 13065064  T
Q  97 t 97  Q
    |    
T  13065065 t 13065065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18117241 - 18117182
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| ||||    
T  18117241 attataaattaattacacaatttcaatacattaactactatataatttcctctttcatat 18117182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18486059 - 18485996
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||||||||  ||||||||    
T  18486059 attataaattaattacacaatttcaatacattaattactatataatttccttttcaatatcctt 18485996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23363255 - 23363318
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||  |||||||    
T  23363255 attataaattaattacacaatttcaatgcattaactactatacaatttcctttttcttatcctt 23363318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 24438575 - 24438473
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccca 94  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||| |||||||||| ||| ||||      |  ||||||| |||||||||||||||||||    
T  24438575 attataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaactagtgccccgggggcaccggttagcatttccca 24438476  T
Q  95 aat 97  Q
    |||    
T  24438475 aat 24438473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 27456201 - 27456264
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||  ||||||||    
T  27456201 attataaattaattacacaatttcaatgcattaactactatataatttctttttccatatcctt 27456264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34333382 - 34333319
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||||||||| ||| ||||    
T  34333382 attataaattaattacacaatttcaatgcattaattactatataatttcctttttcataccctt 34333319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34606359 - 34606296
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||||||||| |||||||| ||| |||||| |||||||||||||||||||| ||||||||    
T  34606359 attataaattaatttcacaatttcaatgcattaattactatataatttcctttttcatatcctt 34606296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 47083153 - 47083090
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||    
T  47083153 attatcaattaattacacaatttcaatacattaactactatataatttcttttttcatatcctt 47083090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 47657078 - 47657015
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||||||| |||||| ||||||||    
T  47657078 attataaattaattacacaatttcaatgcattaattactatataattttctttttcatatcctt 47657015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 18220527 - 18220589
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||| ||||||  |||||||    
T  18220527 ttataaattaattacacaattttaatacattaattactatataattttctttttagtatcctt 18220589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42044381 - 42044435
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||| |||||    
T  42044381 attataaattaattacacaatttcaatctattaactactatataatttctttttt 42044435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 47839590 - 47839488
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatccttta-----tcccggggacaccggttagcatttcccaa 95  Q
    ||||||||||||||||||||||| |||  |||||||| ||||||| ||||||||| |||||||| |      ||| |||||||||||||||||||||| |    
T  47839590 attataaattaattacacaatttcaatgtattaactattatataaattcctttttcatatccttaaccagtaccccgggacaccggttagcatttcccta 47839491  T
Q  96 att 98  Q
    |||    
T  47839490 att 47839488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 22739920 - 22739868
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttcctttt 54  Q
    |||||||||||||||||||||| ||| |||||||||||||||| |||||||||    
T  22739920 ttataaattaattacacaatttcaatgcattaactactatatactttcctttt 22739868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37674192 - 37674240
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttc 49  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  37674192 attataaattaattacacaatttcaatgcattaactactatataatttc 37674240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 45045868 - 45045805
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||| ||||| ||| ||||    
T  45045868 attataaattaattacacaatttcaatgcattaattactatataatttcatttttcataccctt 45045805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 4087720 - 4087667
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    |||||||||||| |||| |||| ||| |||||||||||||||||||||||||||    
T  4087720 ttataaattaatcacactatttcaatgcattaactactatataatttccttttt 4087667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 18220759 - 18220812
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    ||||||||||||||||||||||  || |||||| ||||||||||||||||||||    
T  18220759 ttataaattaattacacaatttctatacattaattactatataatttccttttt 18220812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 29835792 - 29835852
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    |||| ||||||||||| |||||||||| ||||||||| ||||||| ||||||||| |||||    
T  29835792 attacaaattaattacgcaattttaatacattaactagtatataacttcctttttcatatc 29835852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46716736 - 46716676
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||||||||||| ||||| | | |||||| || |||||||||||||||||||||||    
T  46716736 attataaattaattacataatttcagtgcattaagtattatataatttccttttttatatc 46716676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 1737078 - 1737015
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| |||||||||||| |||| ||| ||||||||| ||||||||||| ||||| ||||||||    
T  1737078 attatcaattaattacactatttcaatgcattaactattatataatttcatttttcatatcctt 1737015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 5729444 - 5729381
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| |||||||||||  |||| ||| ||||||||| ||||||||||||||||| ||||||||    
T  5729444 attatcaattaattacattatttcaatacattaactattatataatttcctttttcatatcctt 5729381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 18470030 - 18470081
Alignment:
Q  4 ataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    |||||||||||||||||||| |||  ||||||| ||||||||||||||||||    
T  18470030 ataaattaattacacaatttcaatgtattaactgctatataatttccttttt 18470081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 3021988 - 3021930
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    |||||||||||||| ||||||| |||  |||||||| ||||||||||||||||| ||||    
T  3021988 ttataaattaattatacaatttcaatgtattaactagtatataatttcctttttaatat 3021930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 18220624 - 18220673
Alignment:
Q  6 aaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    |||||||||||||||||| ||| || ||| ||||||||||||||||||||    
T  18220624 aaattaattacacaatttcaatacagtaattactatataatttccttttt 18220673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 525163 - 525223
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||||||||| ||||||| ||| ||||||||||| |||| ||| |||||| |||||    
T  525163 attataaattaattatacaatttcaatgcattaactactgtatacttttctttttcatatc 525223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 5785563 - 5785507
Alignment:
Q  2 ttataaattaattacacaatttt-aatccattaactactatataatttcctttttta 57  Q
    ||||||||||||||||||||||| | | |||||| ||||||| ||||||||||||||    
T  5785563 ttataaattaattacacaattttcactacattaattactataaaatttcctttttta 5785507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 33636550 - 33636491
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||||||||||||||||||||| |||  ||||| || |||||||||| |||||| ||||    
T  33636550 attataaattaattacacaatttcaatgaattaattattatataattttctttttcatat 33636491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 36437474 - 36437412
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||||||||| ||||||| |||  |||| ||||||||||||| |||||||  |||||||    
T  36437474 ttataaattaattaaacaatttcaatgaattacctactatataattacctttttagtatcctt 36437412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 28262098 - 28262066
Alignment:
Q  32 taactactatataatttccttttttatatcctt 64  Q
    |||||||||||||||||||||||| ||||||||    
T  28262098 taactactatataatttcctttttcatatcctt 28262066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26891751 - 26891849
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccc 93  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||      | |||||||| ||||||||||||||||||    
T  26891751 attataaattaattacacaatttcaatgcattaactaatatataatttccttttttatatccttaatcagtgtcccgggggcaccggttagcatttccc 26891849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 44588000 - 44587899
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccca 94  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||      |  ||||||| |||||||||||||||||||    
T  44588000 attataaattaattacacaatttcaatgtattaactactatataatttccttttttatatccttaaccggtgccccgggggcaccggttagcatttccca 44587901  T
Q  95 aa 96  Q
    ||    
T  44587900 aa 44587899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 561606 - 561669
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  561606 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 561669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 5093627 - 5093690
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  5093627 attataaattaattacacaattttaatgcattaactactatttaatttcctttttcatatcctt 5093690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26387152 - 26387215
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  26387152 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 26387215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32860200 - 32860137
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||    
T  32860200 attataaattaattacacaatttcaatgcattaaatactatataatttccttttttatatcctt 32860137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2898169 - 2898106
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||    
T  2898169 attataaattaattacacaatttcaatgcattaactactatataattttctttttcatatcctt 2898106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4381893 - 4381830
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||    
T  4381893 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccctt 4381830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 22567700 - 22567637
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||    
T  22567700 attataaattaattacacaatttcaatacattaactactatataatttcttttttcatatcctt 22567637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 31390110 - 31390047
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  31390110 attataaattaattacataatttcaatacattaactactatataatttcctttttcatatcctt 31390047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 31438744 - 31438681
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||| ||||||||    
T  31438744 attataaattaattacacaatttcaatgcattaactactgtataatttcctttttcatatcctt 31438681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 43637262 - 43637199
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||| || ||||||||    
T  43637262 attataaattaattacacaatttcaatgcattaactactatataatttccttattcatatcctt 43637199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3668201 - 3668254
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttcctttt 54  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  3668201 attataaattaattacacaatttcaatgcattaactactatataatttcctttt 3668254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 15079047 - 15079100
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  15079047 ttataaattaattacacaatttcaatacattaactactatataatttccttttt 15079100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 39531921 - 39531868
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  39531921 ttataaattaattacacaatttcaatgcattaactactatataatttccttttt 39531868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 1859260 - 1859197
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| ||| |||||||||||||| |||||| ||||||||||||||    
T  1859260 attataaattaattacataatttcaatgcattaactactatacaatttctttttttatatcctt 1859197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 8969495 - 8969558
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||||||||||||| |||| ||| |||||||||||||||||||| |||||| ||||||||    
T  8969495 attataaattaattacactatttcaatgcattaactactatataattttctttttcatatcctt 8969558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 20553029 - 20552966
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||||||    
T  20553029 attatcaattaattacacaatttcaatgcattaattactatataatttcctttttcatatcctt 20552966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 22887848 - 22887785
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||| ||||| ||||||||    
T  22887848 attataaattaattacataatttcaatgcattaactactatataatttcttttttcatatcctt 22887785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27584836 - 27584773
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| | |||||||||||||||||||| |||| ||||||||    
T  27584836 attataaattaattacacaatttcaatgctttaactactatataatttcccttttcatatcctt 27584773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 30486300 - 30486245
Alignment:
Q  9 ttaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  30486300 ttaattacacaatttcaatacattaactactatataatttcctttttcatatcctt 30486245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34442620 - 34442683
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| | |||||| ||||||||    
T  34442620 attataaattaattacacaatttcaatgcattaactactatataatcttctttttcatatcctt 34442683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 38590962 - 38591021
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  38590962 attatcaattaattacacaattttaatacattaactactgtataatttcctttttcatat 38591021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27856484 - 27856538
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  27856484 attataaattaattacacaatttcaatgcattaactattatataatttccttttt 27856538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6580287 - 6580224
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||| |||||||||| ||| ||||    
T  6580287 attataaattaattacataatttcaatgcattaactactatatagtttcctttttcataccctt 6580224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11021310 - 11021370
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    |||||| |||||||||||||||| ||| |||||||||| |||||||||| ||||| |||||    
T  11021310 attatatattaattacacaatttcaatgcattaactaccatataatttcttttttcatatc 11021370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38296275 - 38296215
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||||||||||||||||| |||  ||||| ||||||||||||| |||||| |||||    
T  38296275 attataaattaattacacaatttcaatgtattaattactatataattttctttttcatatc 38296215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 13574117 - 13574180
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||| |  |||||| |||||||||| ||||||||    
T  13574117 attataaattaattacacaatttcaatacattaatttttatatattttcctttttcatatcctt 13574180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 5881319 - 5881252
Alignment:
Q  1 attataaattaattacacaatttta----atccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| |    || ||||||||||||||||||||||||||| ||||||||    
T  5881319 attatcaattaattacacaatttcaatgcatgcattaactactatataatttcctttttcatatcctt 5881252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4022567 - 4022625
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||||||||||||||| ||||| ||| ||||||||||||| ||||||| ||||| ||||    
T  4022567 attataaattaattacagaatttcaatacattaactactat-taatttcttttttcatat 4022625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 22068408 - 22068470
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||| ||||||| ||| ||| ||||||||||||||| ||||||| ||||||||    
T  22068408 attatcaattaattatacaatttcaatgcat-aactactatataattccctttttcatatcctt 22068470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35851839 - 35851902
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| |||||||||||  |||| ||| ||||||||| ||||||||||||||||| | ||||||    
T  35851839 attatcaattaattacattatttcaatgcattaactattatataatttcctttttcacatcctt 35851902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25782921 - 25782977
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    |||||||| |||||||||||||| ||| |||||   ||||||||||||||||||| ||||    
T  25782921 attataaaataattacacaatttcaatgcatta---actatataatttcctttttcatat 25782977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 34123113 - 34123166
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    ||||||||||||||||||| || ||  ||||||||| ||||||||||| |||||    
T  34123113 ttataaattaattacacaaattcaaagcattaactattatataatttctttttt 34123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 40210306 - 40210250
Alignment:
Q  2 ttataaattaattacacaatttt-aatccattaactactatataatttcctttttta 57  Q
    |||| |||||||||||| ||||| ||| || ||||||||||| ||||||||||||||    
T  40210306 ttatgaattaattacaccattttcaatgcaataactactataaaatttcctttttta 40210250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 8473002 - 8473065
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  8473002 attataaattaattacacaattttaatgcattaactattatataatttccttttttatatcctt 8473065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35985709 - 35985772
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  35985709 attataaattaattacacaatttcaatgcattaactactatataatttccttttttatatcctt 35985772  T

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Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 51065836 - 51065934
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccc 93  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||      | |||||||||||||||||||||||||||    
T  51065836 attataaattaattacacaatttcaatacattaactactatataatttactttttcatatccttaaccagtgtcccggggacaccggttagcatttccc 51065934  T

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Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 30294469 - 30294570
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctttatc------ccggggacaccggttagcatttccca 94  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||| | |      |||||||||||| |||||||||||||    
T  30294469 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccaatgctccggggacaccgattagcatttccca 30294568  T
Q  95 aa 96  Q
    ||    
T  30294569 aa 30294570  T

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Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 45431376 - 45431279
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctttat-----cccggggacaccggttagcatttccc 93  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||| ||     || |||| ||||||||||||||||||    
T  45431376 attataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaatcaggccctgggggcaccggttagcatttccc 45431279  T

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Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6770435 - 6770372
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  6770435 attataaattaattacacaatttcaatacattaactactatataatttcctttttcatatcctt 6770372  T

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Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18043260 - 18043197
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  18043260 attataaattaattacacaatttcaatgcattaactactatataatttccttttttataccctt 18043197  T

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Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 47010091 - 47010028
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  47010091 attataaattaattacacaatttcaatacattaactactatataatttcctttttcatatcctt 47010028  T

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Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 17333370 - 17333468
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatccttta-----tcccggggacaccggttagcatttccca 94  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||| |      ||||||| |||||||||||||||||||    
T  17333370 attatgaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccgggggcaccggttagcatttccca 17333468  T

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Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3097757 - 3097694
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  3097757 attataaattaattacataatttcaatgcattaactactatataatttcctttttcatatcctt 3097694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3784801 - 3784864
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  3784801 attatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 3784864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 5694419 - 5694356
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||    
T  5694419 attatcaattaattacacaatttcaatgcattaactactatataatttccctttttatatcctt 5694356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 14350365 - 14350428
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||| ||||    
T  14350365 attataaattaattacacaattttaatgcattaactacaatataatttcctttttcataccctt 14350428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29210511 - 29210448
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||    
T  29210511 attataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccctt 29210448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29657869 - 29657806
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  29657869 attatcaattaattatacaatttcaatgcattaactactatataatttccttttttatatcctt 29657806  T

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Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36446413 - 36446467
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  36446413 attataaattaattacacaatttcaatgcattaactactatataatttccttttt 36446467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42770078 - 42770132
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  42770078 attataaattaattacacaatttcaatgcattaactactatataatttccttttt 42770132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 3838866 - 3838919
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  3838866 ttataaattaattacacaattttaatgcattaactattatataatttccttttt 3838919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45449332 - 45449392
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||||| ||||||||||||    
T  45449332 attataatttaattacactattttaatgcattaactactatataattttcttttttatatc 45449392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9266816 - 9266879
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||||||    
T  9266816 attatgaattaattacacaatttcaatgcattaaatactatataatttcctttttcatatcctt 9266879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 12072150 - 12072213
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| |||||||||||| |||||||||||||| ||||||||    
T  12072150 attatcaattaattacacaatttcaatgcattaactactacataatttcctttttcatatcctt 12072213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 15227837 - 15227774
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||||||    
T  15227837 attatcaattaattacacaatttcaatgcattaattactatataatttcctttttcatatcctt 15227774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15282602 - 15282665
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||| |||||| ||||||||    
T  15282602 attataaattaattacacaatttcaatatattaactactatataattttctttttcatatcctt 15282665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19031903 - 19031966
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| |||   ||||||||||||||||||||||||| ||||||||    
T  19031903 attataaattaattacacaatttcaatgttttaactactatataatttcctttttcatatcctt 19031966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 24178551 - 24178614
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||| |||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||||    
T  24178551 attatagattaattacacaatttcaatgcattaactattatataatttcctttttcatatcctt 24178614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 26228291 - 26228228
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||| |||||||| |||||    
T  26228291 attataaattaattacataatttcaatgcattaactactatataatttcattttttatctcctt 26228228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38162948 - 38162885
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| |||||| ||| ||||    
T  38162948 attataaattaattacacaatttcaatgcattaactactatataattttctttttcataccctt 38162885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 39497405 - 39497342
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||||| |||||| ||||||||    
T  39497405 attataaattaattatataattttaatgcattaactactatataattttctttttcatatcctt 39497342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 48071580 - 48071517
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||  ||||||||    
T  48071580 attataaattaattacacaatttcaatgcattaactattatataatttccttttacatatcctt 48071517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 50128260 - 50128323
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||| |||||| |||||| ||||||||    
T  50128260 attataaattaattacacaatttcaatgcattaactactatgtaattttctttttcatatcctt 50128323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 51368873 - 51368936
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||| ||| ||||    
T  51368873 attataaattaactacacaatttcaatgcattaactactatataatttcctttttcataccctt 51368936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 39912368 - 39912430
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||||||| ||||||||| ||| ||||||||| |||||||||||| |||||||||||||    
T  39912368 ttataaattaatcacacaatttcaatgcattaactagtatataatttccctttttatatcctt 39912430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 47532765 - 47532855
Alignment:
Q  8 attaattacacaattttaatccattaactactatataatttccttttttatatcctt-----tatcccggggacaccggttagcatttccc 93  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||     ||  |||| ||||||||||||||||||||    
T  47532765 attaattacacaatttcaatgcattaactactatataattttctttttcatatccttaacagtactccggagacaccggttagcatttccc 47532855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 37315356 - 37315409
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  37315356 ttataaattaattacataatttcaatgcattaactactatataatttccttttt 37315409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38335267 - 38335207
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||||||||||||||||  ||| |||||| |||||||||||||||||||| |||||    
T  38335267 attataaattaattacacaattacaatgcattaattactatataatttcctttttcatatc 38335207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13961309 - 13961247
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||    
T  13961309 attatcaattaattacacaatttcaatgcattaactactatataattt-tttttttatatcctt 13961247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23473552 - 23473615
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| ||||||| ||| |||||||| ||||||||| |||||||| ||||||||    
T  23473552 attataaattaattatacaatttcaatacattaactgctatataatctcctttttcatatcctt 23473615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29683294 - 29683239
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttcctttttt 56  Q
    ||||||||||||||| || |||| ||| ||||||||||||||||||||||||||||    
T  29683294 attataaattaattatacgatttcaatgcattaactactatataatttcctttttt 29683239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30657706 - 30657647
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||| ||||| ||||    
T  30657706 attataaattaattacataatttcaatgcattaactactatataatttcttttttcatat 30657647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 37503311 - 37503260
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttt 53  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  37503311 ttataaattaattacacaatttcaatgtattaactactatataatttccttt 37503260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 38702021 - 38702084
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||| |||||||||| ||| ||||    
T  38702021 attataaattaattacataatttcaatgcattaactactatatagtttcctttttcataccctt 38702084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 43286820 - 43286757
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| ||||| ||  ||||||||| ||||||||||||||||| ||||||||    
T  43286820 attataaattaattacataatttcaaaacattaactattatataatttcctttttcatatcctt 43286757  T

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Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 35700739 - 35700801
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||||||||||||||||| |||  |||||||||| |||||||||||||||  |||||||    
T  35700739 ttataaattaattacacaatttcaatgtattaactactgtataatttcctttttagtatcctt 35700801  T

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Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 52431678 - 52431632
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataattt 48  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  52431678 ttataaattaattacacaatttcaatgcattaactactatataattt 52431632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28481938 - 28481879
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||||||| |||    |||| ||||||||||||||| ||||||||    
T  28481938 attataaattaattacacaattttaatgcat----tactgtataatttcctttttcatatcctt 28481879  T

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Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 10976008 - 10976053
Alignment:
Q  19 aattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||||    
T  10976008 aattttaatgcattaactactatataatctcctttttcatatcctt 10976053  T

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Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 19011112 - 19011180
Alignment:
Q  29 cattaactactatataatttccttttttatatccttta-----tcccggggacaccggttagcatttcc 92  Q
    ||||||||||||||||||||||||||| |||||||| |      ||| |||||||||||||||||||||    
T  19011112 cattaactactatataatttcctttttcatatccttaacccgtgccccgggacaccggttagcatttcc 19011180  T

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Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12307015 - 12306962
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    ||||||||||||||||||||||| |||  ||||||||| ||||||||| ||||||    
T  12307015 attataaattaattacacaatttcaatgtattaactac-atataattttcttttt 12306962  T

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Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 19011057 - 19011095
Alignment:
Q  3 tataaattaattacacaattttaatccattaactactat 41  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  19011057 tataaattaattacacaatttcaatgcattaactactat 19011095  T

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Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 39081898 - 39081845
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttt 55  Q
    |||||||||||||| | ||||| ||| ||||||||| ||||||||||| |||||    
T  39081898 ttataaattaattataaaatttcaatacattaactagtatataatttcattttt 39081845  T

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Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41730406 - 41730344
Alignment:
Q  1 attataaattaattacacaattttaatccatta---actactatataatttccttttttatat 60  Q
    ||||||||||||||| ||||||| ||| |||||   |||||||||||||||| ||||| ||||    
T  41730406 attataaattaattaaacaatttcaatgcattaattactactatataatttcttttttcatat 41730344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 49867524 - 49867472
Alignment:
Q  5 taaattaattacacaattttaatccattaactactatataatttcctttttta 57  Q
    ||||||||||||||||||| ||  |||||| |||||||||| || ||||||||    
T  49867524 taaattaattacacaatttcaaaacattaattactatataactttctttttta 49867472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 52749684 - 52749640
Alignment:
Q  17 acaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||| ||| ||||||||| ||||||||||||||||| |||||    
T  52749684 acaatttcaatacattaactattatataatttcctttttcatatc 52749640  T

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Target: scaffold0045 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 53434 - 53497
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  53434 attataaattaattatacaatttcaatgcattaactactatataatttccttttttatatcctt 53497  T

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Target: scaffold0045; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 50646 - 50586
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||||||||| ||||||| ||  ||||||||||||||||||||||||||| |||||    
T  50646 attataaattaattatacaatttcaaaacattaactactatataatttcctttttcatatc 50586  T

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Target: scaffold0003 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 53776 - 53836
Alignment:
Q  4 ataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  53776 ataaattaattacacaattttaatgcattaactactatataatttcctttttcataccctt 53836  T

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Target: scaffold0674 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7985 - 8048
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  7985 attatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 8048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7386 - 7323
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  7386 attatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 7323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 923 - 860
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||    
T  923 attataaattaattacacaatttcaatgcattaactactatataattttctttttcatatcctt 860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 776 - 716
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||| |||||    
T  776 attataaattaattacacaatttcaatggattaactactatataatttcctttttcatatc 716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 14994 - 14895
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt------tatcccggggacaccggttagcatttccca 94  Q
    |||||||||||| |||||||||| | | ||||||||||||||||||||| ||||||||||| ||      |  |||||||||||||||||||||||||||    
T  14994 attataaattaactacacaatttcagtgcattaactactatataatttctttttttatatctttaaccagtgccccggggacaccggttagcatttccca 14895  T

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Target: scaffold0021 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 116302 - 116242
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatc 61  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||    
T  116302 attatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatc 116242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 23059 - 22996
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| |||  ||||| |||||||||||||||||||| ||||||||    
T  23059 attataaattaattacacaatttcaatgtattaattactatataatttcctttttcatatcctt 22996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 69324 - 69261
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||| |||||| ||||||||    
T  69324 attataaattaattacataattttaatgtattaactactatataatttactttttcatatcctt 69261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 33770 - 33828
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    |||||||||||||||||||||| |||  |||||||| |||||||||||| |||| ||||    
T  33770 ttataaattaattacacaatttcaatgtattaactattatataatttccattttaatat 33828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 68378 - 68441
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||| ||| ||||||||||||||| ||||||||||||||||||||| ||||| ||||||||    
T  68378 attataatttatttacacaattttaatgcattaactactatataatttcatttttcatatcctt 68441  T

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Target: scaffold0002 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 146993 - 147056
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||| ||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||    
T  146993 attatcaattaattacacaatttcaatgtattaactactatataatttcctttttcatatcctt 147056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 11066 - 11121
Alignment:
Q  9 ttaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||||    
T  11066 ttaattacacaatttcaatgcattaactaatatataatttcctttttcatatcctt 11121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6198 - 6261
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||| ||||||||||||||  ||| |||||||||||||||| |||||||||| ||||||||    
T  6198 attataatttaattacacaattccaatgcattaactactatatagtttcctttttcatatcctt 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 25816 - 25754
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcctt 64  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||| ||||||||| ||||||||    
T  25816 attataaattaattacacaatttcaatacattaattactatataa-ttcctttttcatatcctt 25754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 390 - 331
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    |||||||||| |||||||||||| ||| ||||||||| |||||||||| |||||| ||||    
T  390 attataaatttattacacaatttcaatgcattaactattatataattttctttttcatat 331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41017 - 40958
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||||||||||||||| ||||| ||| ||||||||| ||||||||||| ||||| ||||    
T  41017 attataaattaattacataatttcaatgcattaactattatataatttcatttttcatat 40958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 95672 - 95731
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    ||||||||||||||||| ||||| ||| |||||| || ||||||||||||||||| ||||    
T  95672 attataaattaattacataatttcaattcattaattattatataatttcctttttcatat 95731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 5136 - 5090
Alignment:
Q  2 ttataaattaattacacaattttaatccattaactactatataattt 48  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||    
T  5136 ttataaattaattacacaatttcaataaattaactactatataattt 5090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17559 - 17619
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatatcc 62  Q
    |||||||||||||| |||||||| ||| ||||| |||||||||||||| |||||| ||||||    
T  17559 attataaattaatt-cacaatttcaatgcattagctactatataattttctttttcatatcc 17619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19673 - 19732
Alignment:
Q  1 attataaattaattacacaattttaatccattaactactatataatttccttttttatat 60  Q
    |||||||||| |||||||||||| ||| |||||| || ||||||||||| ||||| ||||    
T  19673 attataaattcattacacaatttcaatgcattaattattatataatttcttttttcatat 19732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 10808 - 10771
Alignment:
Q  1 attataaattaattacacaattttaatccattaactac 38  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  10808 attataaattaattacacaatttcaatgcattaactac 10771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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