View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17453_high_26 (Length: 267)
Name: NF17453_high_26
Description: NF17453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17453_high_26 |
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Alignment Details
Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 16 - 255
Target Start/End: Original strand, 52584034 - 52584273
Alignment:
| Q |
16 |
catatttttcattcattctatcaatcacatttccaccaacatcaacaagatcttcaagaagtgactgtactggtttaaggtatctagagttcccaataac |
115 |
Q |
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| T |
52584034 |
catatttttcattcattctatcaatcacatttccaccaacatcaacaagatcttcaagaagtgactgtactggtttaaggtatctagagttcccaataac |
52584133 |
T |
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| Q |
116 |
ggaaccaaaactctcacttccataagaagtagaagtagaacggttcaataataatgagttattattattagaacctgaagcaaaagttccacttccacca |
215 |
Q |
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| T |
52584134 |
agaaccaaaactctcacttccataagaagtagaagtagaacggttcaataataatgagttattattattagaacctgaagcaaaagttccacttccacca |
52584233 |
T |
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| Q |
216 |
ctgaaaaaataatcacttgttagattctccaccacaggtt |
255 |
Q |
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||||||||||||||||| |||||||||||||||||||||| |
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| T |
52584234 |
ctgaaaaaataatcactagttagattctccaccacaggtt |
52584273 |
T |
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