View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17453_low_23 (Length: 298)
Name: NF17453_low_23
Description: NF17453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17453_low_23 |
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Alignment Details
Target: chr1 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 4412691 - 4412965
Alignment:
| Q |
1 |
aaagcttgtcgaaatgaaggagaaaatgagagcagtgaaagaagcaggataagcattaacaatcaaatgtttgatatgaattgaaggtgaagaaagtaat |
100 |
Q |
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| T |
4412691 |
aaagcttgtcgaaatgaaggagaaaatgagagcagtgaaagaagcaggataagcattaacaatcaaatgtttgatatgaattgaaggtgaagaaagtaat |
4412790 |
T |
|
| Q |
101 |
atattataatatcttgctattaattttggatcatgtaagaaacacaaaacatgaattgtgtatattgctctacttagtgaagcattactatattatatga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4412791 |
atattataatatcttgctattaattttggatcatgtaagaaacacaaaacatgaattgtgtatattgctctacttagtgaagcattactatattatatga |
4412890 |
T |
|
| Q |
201 |
ggagttaaaattctcttaaaaaacatgtttatgaattatgatcatgatgactcagttaaaaacatagaatatcat |
275 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4412891 |
ggagttaaaattctcttaaaaaacatgtttatgaattatgatcatgatgactcagttaaaaacatagaatatcat |
4412965 |
T |
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