View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17455_high_22 (Length: 227)
Name: NF17455_high_22
Description: NF17455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17455_high_22 |
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Alignment Details
Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 9011309 - 9011532
Alignment:
| Q |
1 |
atgcttgtcaatgttaaacaacaaagatgaaattcgtgtgcttccttgttcacacgaatttcacaaggtttgtgtagatagttggctaaagggtcatcat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9011309 |
atgcttgtcaatgttaaacaacaaagatgaaattcgtgtgcttccttgttcacacgaatttcacaaggtttgtgtagatagttggctaaagggtcatcat |
9011408 |
T |
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| Q |
101 |
aaaacatgtccattgtgtcgtttttcaatgggaggtgaagaaaagtc---tcattgtgctgaaatgttcagtgaagatatgctaatatggttttcttctt |
197 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
9011409 |
aaaacatgtccattgtgtcgtttttcaatgggagttgaagaaaagtctcatcatcgtgctgaaatgttcagtgaagagatgctaatatggttttcttctt |
9011508 |
T |
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| Q |
198 |
tccatatagctggtatgtaaatgt |
221 |
Q |
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|||||||||||||||||||||||| |
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| T |
9011509 |
tccatatagctggtatgtaaatgt |
9011532 |
T |
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