View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17455_low_24 (Length: 229)

Name: NF17455_low_24
Description: NF17455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17455_low_24
NF17455_low_24
[»] chr7 (40 HSPs)
chr7 (1-138)||(21140827-21140978)
chr7 (132-229)||(24339652-24339750)
chr7 (111-180)||(598256-598326)
chr7 (159-229)||(15902832-15902902)
chr7 (111-229)||(23751910-23752017)
chr7 (151-229)||(26033432-26033510)
chr7 (111-229)||(11831442-11831561)
chr7 (111-180)||(21880200-21880270)
chr7 (111-174)||(32093955-32094020)
chr7 (148-229)||(11665408-11665489)
chr7 (176-229)||(21140978-21141031)
chr7 (152-229)||(26329354-26329431)
chr7 (148-229)||(32308130-32308211)
chr7 (111-174)||(5409772-5409836)
chr7 (111-174)||(9778559-9778623)
chr7 (111-174)||(43027405-43027469)
chr7 (148-219)||(2334270-2334340)
chr7 (110-211)||(4794917-4795019)
chr7 (111-180)||(21864856-21864926)
chr7 (72-109)||(598282-598319)
chr7 (72-109)||(9778579-9778616)
chr7 (111-182)||(4017730-4017802)
chr7 (129-176)||(8234198-8234246)
chr7 (73-109)||(8842287-8842323)
chr7 (148-180)||(15680857-15680889)
chr7 (134-229)||(27229264-27229359)
chr7 (111-229)||(7438716-7438835)
chr7 (162-229)||(9408316-9408383)
chr7 (137-180)||(25956493-25956536)
chr7 (111-180)||(24105726-24105796)
chr7 (111-180)||(32287404-32287474)
chr7 (111-180)||(33994260-33994330)
chr7 (72-109)||(5409779-5409816)
chr7 (148-229)||(6630880-6630961)
chr7 (148-229)||(8160426-8160507)
chr7 (163-229)||(11272569-11272637)
chr7 (72-109)||(21880226-21880263)
chr7 (133-209)||(25822685-25822762)
chr7 (132-180)||(26733352-26733401)
chr7 (69-109)||(29812606-29812645)
[»] scaffold0003 (2 HSPs)
scaffold0003 (111-229)||(241604-241723)
scaffold0003 (72-109)||(241679-241716)
[»] chr8 (30 HSPs)
chr8 (111-229)||(15816059-15816178)
chr8 (151-229)||(2572027-2572105)
chr8 (111-229)||(8343326-8343445)
chr8 (111-229)||(11927016-11927135)
chr8 (111-229)||(11944675-11944794)
chr8 (111-229)||(22651986-22652105)
chr8 (111-182)||(34450962-34451034)
chr8 (134-180)||(5813640-5813687)
chr8 (111-229)||(29510234-29510353)
chr8 (134-229)||(21465422-21465518)
chr8 (110-229)||(29447039-29447159)
chr8 (111-174)||(39820482-39820546)
chr8 (130-180)||(3951496-3951547)
chr8 (111-180)||(36450695-36450765)
chr8 (72-109)||(15816066-15816103)
chr8 (130-229)||(13009442-13009542)
chr8 (148-216)||(29447467-29447535)
chr8 (109-180)||(43737750-43737822)
chr8 (111-229)||(4673355-4673474)
chr8 (137-219)||(26902131-26902214)
chr8 (133-229)||(22197694-22197791)
chr8 (132-169)||(22943311-22943349)
chr8 (152-229)||(24362173-24362251)
chr8 (123-180)||(33405337-33405395)
chr8 (132-180)||(40332239-40332288)
chr8 (148-180)||(926767-926799)
chr8 (73-105)||(13436922-13436954)
chr8 (111-174)||(24858070-24858134)
chr8 (157-229)||(25172675-25172747)
chr8 (130-177)||(31557047-31557095)
[»] chr1 (43 HSPs)
chr1 (123-229)||(9629842-9629949)
chr1 (111-229)||(9828054-9828173)
chr1 (111-229)||(32461394-32461512)
chr1 (111-229)||(47989507-47989626)
chr1 (112-229)||(1486646-1486758)
chr1 (111-204)||(25934651-25934745)
chr1 (111-224)||(34371728-34371844)
chr1 (159-229)||(44482240-44482310)
chr1 (111-219)||(5944303-5944412)
chr1 (130-229)||(6612120-6612220)
chr1 (111-229)||(25361896-25362011)
chr1 (132-182)||(40917806-40917857)
chr1 (111-180)||(37598879-37598949)
chr1 (111-180)||(51410073-51410143)
chr1 (111-182)||(6427521-6427593)
chr1 (111-182)||(21032263-21032335)
chr1 (111-229)||(16164245-16164364)
chr1 (111-229)||(18556386-18556505)
chr1 (111-180)||(34741894-34741964)
chr1 (112-180)||(29163323-29163392)
chr1 (130-174)||(31015091-31015136)
chr1 (132-180)||(46348345-46348394)
chr1 (133-180)||(1815305-1815353)
chr1 (112-204)||(17778581-17778670)
chr1 (133-229)||(17831485-17831580)
chr1 (111-180)||(9690214-9690285)
chr1 (74-109)||(32461401-32461436)
chr1 (111-180)||(12918993-12919063)
chr1 (111-180)||(18337377-18337447)
chr1 (111-180)||(22515828-22515898)
chr1 (132-177)||(40181922-40181968)
chr1 (111-180)||(41597411-41597481)
chr1 (72-109)||(18556393-18556430)
chr1 (157-226)||(28273065-28273134)
chr1 (132-180)||(40258895-40258944)
chr1 (72-109)||(42359397-42359434)
chr1 (132-180)||(42359411-42359460)
chr1 (75-107)||(351028-351060)
chr1 (69-109)||(6574048-6574088)
chr1 (148-180)||(21530737-21530769)
chr1 (185-229)||(36878471-36878515)
chr1 (185-229)||(46348388-46348432)
chr1 (185-229)||(52903259-52903303)
[»] chr4 (35 HSPs)
chr4 (111-226)||(30982808-30982924)
chr4 (148-229)||(30838220-30838301)
chr4 (111-219)||(22234820-22234929)
chr4 (111-180)||(23292927-23292997)
chr4 (111-229)||(19482678-19482797)
chr4 (111-180)||(12895215-12895285)
chr4 (117-229)||(21873309-21873420)
chr4 (117-229)||(21929170-21929281)
chr4 (130-229)||(903932-904032)
chr4 (133-180)||(34306767-34306815)
chr4 (111-204)||(5414102-5414196)
chr4 (163-229)||(40742601-40742667)
chr4 (137-218)||(46083947-46084029)
chr4 (132-180)||(49431074-49431123)
chr4 (111-182)||(16184877-16184949)
chr4 (133-179)||(8423681-8423728)
chr4 (148-219)||(19312355-19312426)
chr4 (111-229)||(24613631-24613750)
chr4 (111-169)||(29205527-29205586)
chr4 (111-229)||(36635334-36635448)
chr4 (148-229)||(7012076-7012158)
chr4 (132-162)||(11326593-11326623)
chr4 (111-172)||(35161092-35161154)
chr4 (110-174)||(3947701-3947766)
chr4 (72-109)||(8423666-8423703)
chr4 (72-109)||(23292934-23292971)
chr4 (133-229)||(27706129-27706226)
chr4 (132-180)||(28964210-28964259)
chr4 (72-109)||(30982815-30982852)
chr4 (72-109)||(37203326-37203363)
chr4 (75-111)||(848039-848075)
chr4 (148-180)||(4157197-4157229)
chr4 (148-180)||(4157484-4157516)
chr4 (130-174)||(8402703-8402747)
chr4 (152-180)||(54580006-54580034)
[»] chr6 (39 HSPs)
chr6 (132-229)||(16766707-16766805)
chr6 (132-229)||(8365470-8365568)
chr6 (111-204)||(16488520-16488614)
chr6 (111-180)||(28152146-28152216)
chr6 (111-180)||(4877991-4878060)
chr6 (133-228)||(10339077-10339174)
chr6 (130-229)||(9522901-9523001)
chr6 (110-229)||(31384930-31385049)
chr6 (111-192)||(3209435-3209517)
chr6 (132-229)||(5970059-5970157)
chr6 (132-229)||(9107321-9107419)
chr6 (111-204)||(18367871-18367965)
chr6 (111-180)||(28715343-28715413)
chr6 (111-180)||(33001230-33001300)
chr6 (153-229)||(9195727-9195803)
chr6 (165-229)||(10842542-10842606)
chr6 (113-180)||(32978842-32978910)
chr6 (130-219)||(21223715-21223805)
chr6 (111-180)||(34595182-34595252)
chr6 (111-219)||(8714000-8714109)
chr6 (72-109)||(9025453-9025490)
chr6 (188-229)||(10888982-10889023)
chr6 (111-180)||(12868617-12868691)
chr6 (148-229)||(25038039-25038120)
chr6 (111-218)||(7248379-7248487)
chr6 (185-229)||(7938126-7938170)
chr6 (111-174)||(17327591-17327655)
chr6 (151-227)||(26562701-26562777)
chr6 (112-174)||(12696383-12696446)
chr6 (123-180)||(853812-853870)
chr6 (111-180)||(6898222-6898292)
chr6 (111-176)||(17841530-17841596)
chr6 (111-180)||(24645529-24645599)
chr6 (75-109)||(31385007-31385041)
chr6 (111-159)||(9027236-9027285)
chr6 (72-109)||(32978847-32978884)
chr6 (200-229)||(34447378-34447407)
chr6 (185-229)||(7086805-7086849)
chr6 (185-229)||(26178686-26178730)
[»] chr2 (41 HSPs)
chr2 (133-224)||(35056883-35056975)
chr2 (111-229)||(30717460-30717579)
chr2 (115-180)||(12224271-12224337)
chr2 (111-219)||(34784912-34785021)
chr2 (111-229)||(22084757-22084881)
chr2 (111-229)||(37419753-37419872)
chr2 (110-229)||(27286221-27286341)
chr2 (111-229)||(26769521-26769640)
chr2 (132-229)||(23354603-23354701)
chr2 (111-180)||(24009343-24009413)
chr2 (132-180)||(2438681-2438730)
chr2 (148-229)||(4207867-4207947)
chr2 (111-229)||(38919216-38919335)
chr2 (111-180)||(20242668-20242738)
chr2 (111-180)||(28596517-28596587)
chr2 (175-229)||(30527590-30527644)
chr2 (111-180)||(34993923-34993993)
chr2 (111-204)||(36096305-36096399)
chr2 (132-180)||(15972921-15972970)
chr2 (72-109)||(23058392-23058429)
chr2 (132-180)||(38117121-38117170)
chr2 (111-229)||(2331804-2331921)
chr2 (133-229)||(27084272-27084365)
chr2 (185-229)||(34691810-34691854)
chr2 (185-229)||(34714222-34714266)
chr2 (130-180)||(5040782-5040833)
chr2 (130-180)||(5367240-5367291)
chr2 (111-226)||(38355818-38355933)
chr2 (136-229)||(15657874-15657968)
chr2 (111-180)||(18840954-18841024)
chr2 (111-180)||(30404791-30404861)
chr2 (112-229)||(36756275-36756393)
chr2 (72-109)||(2438667-2438704)
chr2 (111-167)||(3414929-3414986)
chr2 (133-225)||(11223816-11223908)
chr2 (72-109)||(37419828-37419865)
chr2 (132-179)||(19942314-19942362)
chr2 (185-229)||(20539679-20539723)
chr2 (137-224)||(32749781-32749869)
chr2 (111-174)||(41843500-41843564)
chr2 (111-174)||(42511323-42511387)
[»] scaffold0044 (2 HSPs)
scaffold0044 (123-229)||(53190-53297)
scaffold0044 (72-109)||(53265-53302)
[»] chr3 (41 HSPs)
chr3 (111-229)||(15796224-15796343)
chr3 (111-229)||(8039765-8039884)
chr3 (111-229)||(14209123-14209242)
chr3 (111-229)||(41961580-41961699)
chr3 (132-229)||(4987242-4987340)
chr3 (134-229)||(16789022-16789117)
chr3 (111-229)||(17005549-17005668)
chr3 (112-229)||(29508454-29508567)
chr3 (132-180)||(10955000-10955049)
chr3 (134-229)||(14832109-14832205)
chr3 (111-229)||(14216902-14217021)
chr3 (111-229)||(14223031-14223150)
chr3 (111-180)||(7171549-7171619)
chr3 (111-180)||(55401123-55401193)
chr3 (132-180)||(40993297-40993346)
chr3 (134-229)||(11665954-11666050)
chr3 (111-174)||(15864886-15864950)
chr3 (140-226)||(25064922-25065007)
chr3 (111-182)||(34307716-34307788)
chr3 (111-229)||(34185053-34185172)
chr3 (111-180)||(13845466-13845536)
chr3 (133-182)||(14223811-14223861)
chr3 (130-180)||(28918049-28918102)
chr3 (72-109)||(15999958-15999995)
chr3 (72-109)||(29508524-29508561)
chr3 (125-229)||(55212973-55213077)
chr3 (111-229)||(28812525-28812644)
chr3 (115-180)||(2941606-2941672)
chr3 (111-180)||(11252024-11252094)
chr3 (130-167)||(15999970-16000008)
chr3 (111-180)||(20503513-20503583)
chr3 (164-229)||(1509549-1509614)
chr3 (111-182)||(21211339-21211412)
chr3 (192-229)||(23870571-23870608)
chr3 (72-109)||(34185060-34185097)
chr3 (72-109)||(41961587-41961624)
chr3 (72-109)||(49651724-49651761)
chr3 (72-108)||(4987229-4987265)
chr3 (185-229)||(8383267-8383311)
chr3 (111-174)||(27505305-27505369)
chr3 (148-180)||(45451601-45451633)
[»] chr5 (37 HSPs)
chr5 (123-229)||(43554531-43554632)
chr5 (134-229)||(36642716-36642811)
chr5 (130-211)||(21542058-21542140)
chr5 (130-229)||(21522760-21522860)
chr5 (130-229)||(21533326-21533426)
chr5 (111-229)||(39698551-39698670)
chr5 (132-229)||(7677715-7677813)
chr5 (111-204)||(21814296-21814390)
chr5 (110-204)||(6401533-6401628)
chr5 (132-229)||(19579711-19579809)
chr5 (132-229)||(30098336-30098434)
chr5 (111-180)||(43564929-43564999)
chr5 (112-180)||(30502330-30502399)
chr5 (112-180)||(30542673-30542742)
chr5 (153-229)||(11685949-11686024)
chr5 (111-179)||(17123097-17123165)
chr5 (111-229)||(3966513-3966632)
chr5 (114-180)||(30098982-30099049)
chr5 (111-180)||(21576686-21576756)
chr5 (114-191)||(30183597-30183675)
chr5 (132-180)||(15382533-15382582)
chr5 (132-180)||(21191018-21191067)
chr5 (111-175)||(27932288-27932353)
chr5 (132-180)||(39268560-39268609)
chr5 (186-229)||(5467984-5468027)
chr5 (72-111)||(17088365-17088404)
chr5 (113-211)||(18592101-18592200)
chr5 (132-174)||(31084382-31084425)
chr5 (114-155)||(36577616-36577657)
chr5 (72-109)||(43564955-43564992)
chr5 (193-229)||(10022642-10022678)
chr5 (193-229)||(12927664-12927700)
chr5 (132-219)||(17088305-17088388)
chr5 (185-229)||(23012413-23012457)
chr5 (185-229)||(23220993-23221037)
chr5 (149-229)||(26609363-26609443)
chr5 (185-229)||(28588679-28588723)
[»] scaffold0171 (1 HSPs)
scaffold0171 (111-219)||(23531-23640)
[»] scaffold0123 (1 HSPs)
scaffold0123 (111-227)||(44455-44572)
[»] scaffold0050 (1 HSPs)
scaffold0050 (113-180)||(70326-70394)
[»] scaffold0136 (1 HSPs)
scaffold0136 (132-229)||(3800-3898)
[»] scaffold0057 (1 HSPs)
scaffold0057 (111-182)||(24081-24154)
[»] scaffold0652 (1 HSPs)
scaffold0652 (109-180)||(401-473)
[»] scaffold0053 (1 HSPs)
scaffold0053 (133-180)||(8846-8894)
[»] scaffold0019 (1 HSPs)
scaffold0019 (111-182)||(71782-71854)
[»] scaffold0512 (1 HSPs)
scaffold0512 (111-180)||(4977-5047)
[»] scaffold0380 (1 HSPs)
scaffold0380 (111-184)||(8645-8719)
[»] scaffold0008 (1 HSPs)
scaffold0008 (155-229)||(263347-263421)
[»] scaffold0361 (1 HSPs)
scaffold0361 (111-175)||(14580-14645)
[»] scaffold0039 (1 HSPs)
scaffold0039 (132-228)||(84924-85021)
[»] scaffold0024 (1 HSPs)
scaffold0024 (164-229)||(68226-68291)
[»] scaffold0086 (1 HSPs)
scaffold0086 (132-219)||(2948-3036)
[»] scaffold0623 (1 HSPs)
scaffold0623 (130-204)||(5945-6020)
[»] scaffold0083 (1 HSPs)
scaffold0083 (130-180)||(45490-45541)
[»] scaffold0450 (1 HSPs)
scaffold0450 (134-182)||(8588-8637)
[»] scaffold0316 (1 HSPs)
scaffold0316 (111-191)||(16182-16263)
[»] scaffold0306 (1 HSPs)
scaffold0306 (112-180)||(13454-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (112-180)||(21804-21873)
[»] scaffold0022 (1 HSPs)
scaffold0022 (111-179)||(90892-90961)
[»] scaffold0697 (1 HSPs)
scaffold0697 (148-180)||(1692-1724)
[»] scaffold0154 (1 HSPs)
scaffold0154 (132-191)||(13461-13521)


Alignment Details
Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 21140827 - 21140978
Alignment:
Q  1 cataacacctttaatgaccaaaagaaaagatnnnnnnntgagggctctattacaaaatatata--------------tcataacaccgacaccgggacac 86  Q
    ||||||||| |||||||||||||||||||||       |||||||||||||||||||||||||              |||||||||||||||||||||||    
T  21140827 cataacaccattaatgaccaaaagaaaagataaaaaaatgagggctctattacaaaatatatatcaaaacacctatatcataacaccgacaccgggacac 21140926  T
Q  87 gcctaatccaagaagtgtccgtgttatgaagcacaaacacttattggattag 138  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  21140927 gcctaatcgaagaagtgtccgtgttatgaagcacaaacacttcttggattag 21140978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 24339750 - 24339652
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||||| | |||| ||||| |||||| ||||||| |||||||||    
T  24339750 ggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 24339652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 598326 - 598256
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||| | ||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  598326 tatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 598256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 15902902 - 15902832
Alignment:
Q  159 gtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||| |||||||| |  ||||||| |||||| |||||||||||| |||||||||||||||||    
T  15902902 gtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattat 15902832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 23752017 - 23751910
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccgtgtcggacacgtgtc-gtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||| |||||||| ||||||||||||||||||||| |||||| ||| ||||||||||            |||||||||| || ||||||||||    
T  23752017 tatgaagcacagacacttatcggattaggcgtgtcccgtgtctgacacgcgtcggtgtccgaca------------cgacacctatgattacactaaatt 23751930  T
Q  210 atatgattttatcaaattat 229  Q
    |||| |||||||||||||||    
T  23751929 atatcattttatcaaattat 23751910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 26033432 - 26033510
Alignment:
Q  151 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||| |||| |||||||||||||| ||||||| | |||| ||||| |||||| ||||||| |||||||||    
T  26033432 tcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattat 26033510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 11831561 - 11831442
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtg-tcccgtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    |||||||||  |||| || |||||||||||||| ||| |||||  |||| |||||||||||||||||| ||||  |  | || | |||| ||||||||||    
T  11831561 tatgaagcatgaacagttcttggattaggcgtgctccggtgtcaaacacatgtcgtgtccgacaccgatacgacacgaatacttgtaattacactaaatt 11831462  T
Q  210 atatgattttatcaaattat 229  Q
    |||||||||| |||||||||    
T  11831461 atatgattttttcaaattat 11831442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 21880270 - 21880200
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||| | ||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  21880270 tatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacac 21880200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 32093955 - 32094020
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc--gtgtcggacacgtgtcgtgtccgacac 174  Q
    |||||||||| ||||||  | ||||||||||||||||  |||||||||||||||||||||||||||    
T  32093955 tatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacac 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 11665408 - 11665489
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||||||||||||||| ||||||||||| ||   |||||| |||||| | ||| |||||| ||||||| |||||||||    
T  11665408 gtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaattatgtgattttttcaaattat 11665489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 21140978 - 21141031
Alignment:
Q  176 gacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| | |||||||    
T  21140978 gacacgactccgacacctataatcacactgaattatatgattttcttaaattat 21141031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 26329354 - 26329431
Alignment:
Q  152 cggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||||||| |||||||||||||  ||||||| |||||| ||||| |||| | || |||| |||||||||    
T  26329354 cggacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattat 26329431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 32308211 - 32308130
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||||| ||||||||||| ||||||||||||  | ||||| || ||| ||||| |||||| ||||||| |||||||||    
T  32308211 gtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattat 32308130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 5409772 - 5409836
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacac 174  Q
    ||||||||||  |||||  | ||||||||||||||||| ||||||||||||||||||||||||||    
T  5409772 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 9778623 - 9778559
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacac 174  Q
    ||||||||||  |||||  ||||||||||||||||||| |||||||||||||| |||||||||||    
T  9778623 tatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacac 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 43027405 - 43027469
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacac 174  Q
    ||||||||||  ||||| || ||||||||||||||||| |||||||||||||||||||| |||||    
T  43027405 tatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 2334340 - 2334270
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgatttt 219  Q
    |||||||||| ||||||||||||||| ||||||||  ||||||| | |||| |||||||||||| |||||||    
T  2334340 gtgtcggacatgtgtcgtgtccgaca-cgacacgacaccgacacttgtaattacactaaattatgtgatttt 2334270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 4795019 - 4794917
Alignment:
Q  110 ttatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaat 208  Q
    |||||||||||| |||||| ||||||||| |||||   | |||| || ||||||||||||||||||||| |||   ||||||| |||||| ||||| |||    
T  4795019 ttatgaagcacagacacttcttggattagacgtgtttaggtgtcagatacgtgtcgtgtccgacaccgatacggtaccgacacttataattacactgaat 4794920  T
Q  209 tat 211  Q
    |||    
T  4794919 tat 4794917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 21864926 - 21864856
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||| |||||  | | ||||| ||||||||| ||||||||||||||||||||||||| ||||||    
T  21864926 tatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacac 21864856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 598282 - 598319
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||||||||||| |||||||||||||    
T  598282 ccgacaccgggacacgcctaatccgagaagtgtccgtg 598319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 9778579 - 9778616
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  9778579 ccgacaccgggacacgcctaatccaaggagtgtccgtg 9778616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 4017730 - 4017802
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccgtgtcggacacgtgtc-gtgtccgacaccgacacga 182  Q
    |||||||||| ||||||| || |||||||||||| ||||||| |||||  ||| |||||||||||| ||||||    
T  4017730 tatgaagcacgaacactttttagattaggcgtgttccgtgtcagacacacgtcggtgtccgacaccaacacga 4017802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 8234246 - 8234198
Alignment:
Q  129 attggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccg 176  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  8234246 attggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccg 8234198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 8842323 - 8842287
Alignment:
Q  73 cgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||||||||||||| ||||||||||    
T  8842323 cgacaccgggacacgcctaatccaaggagtgtccgtg 8842287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 15680889 - 15680857
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||||||||||||||||||||||||||    
T  15680889 gtgtcggacacgtgtcgtgtccgacaccgacac 15680857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 27229264 - 27229359
Alignment:
Q  134 attaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||||||||  |||||| |||||| ||||||| ||||  |||||||  |||| || |||||| |||||||||||| |||||||| ||||||||    
T  27229264 attaggcgtgtcctagtgtcgaacacgtatcgtgtctgacagtgacacgacaccgatacttataattacactaaattatgtgatttta-caaattat 27229359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 7438835 - 7438716
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcc-cgtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||  ||| |||||||||||||  |||||| ||| |||||||||  |||||||||| ||  ||||||| | |||| ||| | ||||    
T  7438835 tatgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgtttgacaccgacatgacaccgacacttgtaattacattgaatt 7438736  T
Q  210 atatgattttatcaaattat 229  Q
    || ||||||| |||||||||    
T  7438735 atgtgattttttcaaattat 7438716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 9408316 - 9408383
Alignment:
Q  162 tcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||| |||||||| ||||  ||||||| | |||| |||||||||||| ||||||| |||||||||    
T  9408316 tcgtgtctgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 9408383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 25956536 - 25956493
Alignment:
Q  137 aggcgtgtcccgtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||||||||| |||| || |||||||||||||||||||    
T  25956536 aggcgtgtcccgtgtccgacatgtatcgtgtccgacaccgacac 25956493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 24105796 - 24105726
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||||||||||  | || ||||||||||||| ||||||||||| ||| ||| ||||| |||||||    
T  24105796 tatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacac 24105726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 32287404 - 32287474
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||  | |||||||| |||||||| |||||||||| |||| ||||||||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacac 32287474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 33994330 - 33994260
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||| ||| ||||||  |||||||||||||||| || ||| ||||| |||||||||| |||||||||||    
T  33994330 tatgaaacacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacac 33994260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 5409816 - 5409779
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||||||||||| || ||||||||||    
T  5409816 ccgacaccgggacacgcctaatccgaggagtgtccgtg 5409779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 6630880 - 6630961
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||| ||||||| |||||||||||| ||||||   |||||| |||||| ||||| |||||  ||| ||| |||||||||    
T  6630880 gtgtcgggcacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttctcaaattat 6630961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 8160507 - 8160426
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||   ||||| ||||||||||||||  || |||| |||||| |||||||||||| | ||||| | |||||||    
T  8160507 gtgtcggacacgatacgtgttcgacaccgacacgataccaacacatataattacactaaattatgtaattttcttaaattat 8160426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 11272569 - 11272637
Alignment:
Q  163 cgtgtccgacaccgacacgagtccgacacctataatcacactaaattata--tgattttatcaaattat 229  Q
    ||||||||||||||||||||  ||||||| | |||| ||||| |||||||  ||||||| |||||||||    
T  11272569 cgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaattat 11272637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 21880226 - 21880263
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  21880226 ccgacaccaggacacgcctaatccgagaagtgtccgtg 21880263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 25822762 - 25822685
Alignment:
Q  133 gattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    |||||||| ||||||| |||| |||||||||||||||||| ||||| ||||  ||||||| | |||| ||||| ||||    
T  25822762 gattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaatt 25822685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 26733401 - 26733352
Alignment:
Q  132 ggattaggcgtgt-cccgtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||||| ||||| ||||||| | ||||||||||||||||||||    
T  26733401 ggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacac 26733352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 29812645 - 29812606
Alignment:
Q  69 acaccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  29812645 acaccgacac-gggacacgcctaatccgagaagtgtccgtg 29812606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 241723 - 241604
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||| | ||||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||||  ||||| ||||||||||    
T  241723 tatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaatt 241624  T
Q  210 atatgattttatcaaattat 229  Q
    || |||||||  ||||||||    
T  241623 atgtgatttttccaaattat 241604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 241679 - 241716
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||||||||||| |||||||||||||    
T  241679 ccgacaccgggacacgcctaatccgagaagtgtccgtg 241716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 15816059 - 15816178
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||| | ||||||||||||||||| |||||||  |||||||||||||||||| ||||||  ||||||| |||||| ||||||||||    
T  15816059 tatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaatt 15816158  T
Q  210 atatgattttatcaaattat 229  Q
    || ||||||| |||||||||    
T  15816159 atgtgattttttcaaattat 15816178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 2572027 - 2572105
Alignment:
Q  151 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||||||||||||||||||| |||||||  ||||||| | |||| |||||||||||| ||||||| |||||||||    
T  2572027 tcggacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 2572105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 8343445 - 8343326
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||| |||||  | ||||||||||||||||| |||||||||||||||||||| |||||    ||||  | ||||| | |||| ||||||||||    
T  8343445 tatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaatt 8343346  T
Q  210 atatgattttatcaaattat 229  Q
    || ||||||| |||||||||    
T  8343345 atgtgattttttcaaattat 8343326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 11927016 - 11927135
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  ||||| || |||||||||||||| || ||| ||| || ||||||||  |||||| ||||||  ||||||| |||||| ||||| ||||    
T  11927016 tatgaagcacggacactcatcggattaggcgtgtctcgatgttggatacatgtcgtgtatgacaccaacacgacaccgacacatataattacactgaatt 11927115  T
Q  210 atatgattttatcaaattat 229  Q
    || |||||||||||||||||    
T  11927116 atgtgattttatcaaattat 11927135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 11944794 - 11944675
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    |||||||||| |||||| || |||||||||||||| || ||||||| || ||||||||  |||| | ||||||  ||||||| |||||| ||||| | ||    
T  11944794 tatgaagcacgaacactcatcggattaggcgtgtctcggtgtcggatacatgtcgtgtatgacatcaacacgacaccgacacatataattacactgagtt 11944695  T
Q  210 atatgattttatcaaattat 229  Q
    || |||||||||||||||||    
T  11944694 atgtgattttatcaaattat 11944675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 22652105 - 22651986
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||  | ||||||| ||||||||| |||||||||| |||||||||||||||||||||||  ||||||| | |||| | | | ||||    
T  22652105 tatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaatt 22652006  T
Q  210 atatgattttatcaaattat 229  Q
    || ||||||| |||||||||    
T  22652005 atgtgattttttcaaattat 22651986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 34450962 - 34451034
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacga 182  Q
    ||||||||||  |||||  |||||| ||||||||||| ||||| |||||||||||||||||||||||||||||    
T  34450962 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacga 34451034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 5813687 - 5813640
Alignment:
Q  134 attaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5813687 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 5813640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 29510234 - 29510353
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||  | |||||||| |||||||| ||||||||||| |||||||||||||||||||| |  ||||||| | |||| | ||| ||||    
T  29510234 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaatt 29510333  T
Q  210 atatgattttatcaaattat 229  Q
     | ||||||| |||||||||    
T  29510334 ttgtgattttttcaaattat 29510353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 21465518 - 21465422
Alignment:
Q  134 attaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||| |||| |||| |||||||||||||||||||||| |||||||  || |||| | |||| |||   |||||||||||||| |||||||||    
T  21465518 attaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattat 21465422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 29447039 - 29447159
Alignment:
Q  110 ttatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaat 208  Q
    |||||||||||  |||||  | ||||||||||||||| | |||| ||||| |||||||||||||||||||| ||  ||||||| | || | ||| | |||    
T  29447039 ttatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaat 29447138  T
Q  209 tatatgattttatcaaattat 229  Q
    ||| ||||||| |||||||||    
T  29447139 tatgtgattttctcaaattat 29447159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 39820546 - 39820482
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccgtgtcggacacgtgtc-gtgtccgacac 174  Q
    ||||||||||  |||||| | |||||||||||||||||||||||||||| ||| |||||||||||    
T  39820546 tatgaagcacggacacttctcggattaggcgtgtcccgtgtcggacacgcgtcggtgtccgacac 39820482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 3951496 - 3951547
Alignment:
Q  130 ttggattaggcgtgt-cccgtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  3951496 ttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacac 3951547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 36450695 - 36450765
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||| |||||  | ||||||||||||||| | ||||||||||| ||||||||||||||| ||||    
T  36450695 tatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacac 36450765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 15816103 - 15816066
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||||||||||| |||||||||||||    
T  15816103 ccgacaccgggacacgcctaatccgagaagtgtccgtg 15816066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 13009442 - 13009542
Alignment:
Q  130 ttggattaggcgtgtcccgtgtcggacacgtgtc-gtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaatta 228  Q
    |||||||||||||||||||||||||||| | ||| ||||| |||||| ||||     |||||| ||| || ||||||||||||||  |||| ||||||||    
T  13009442 ttggattaggcgtgtcccgtgtcggacaggcgtcggtgtctgacacctacaccgacacgacacttatgattacactaaattatattgttttctcaaatta 13009541  T
Q  229 t 229  Q
    |    
T  13009542 t 13009542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 29447535 - 29447467
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgat 216  Q
    ||||||||||| ||||||||| |||||||||||||  || |||| |||||| ||||| |||||| ||||    
T  29447535 gtgtcggacacatgtcgtgtctgacaccgacacgacaccaacacatataattacacttaattatgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 43737750 - 43737822
Alignment:
Q  109 gttatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||||  |||||  |||||| |||||| |||| ||||| ||||| |||||||||||||||||||||    
T  43737750 gttatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacac 43737822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 4673355 - 4673474
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtg-tcccgtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||| |||||  |||||||||||||| ||| |||||||| | | ||||||||||||| | ||| ||  | || || | |||| ||||| ||||    
T  4673355 tatgaagcacagacactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgacatcaacaagacactgatacttgtaattacactgaatt 4673454  T
Q  210 atatgattttatcaaattat 229  Q
     ||||||||| |||||||||    
T  4673455 ttatgattttttcaaattat 4673474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 26902131 - 26902214
Alignment:
Q  137 aggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgatttt 219  Q
    ||||||||||| ||| | |||||||||||||||||||||  | ||||  ||||||| |||||| ||||| |||||| |||||||    
T  26902131 aggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 229
Target Start/End: Original strand, 22197694 - 22197791
Alignment:
Q  133 gattaggcgtg-tcccgtgtcggacacgtgtcgtgtccgacaccgacac-gagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||| ||| |||||||||||||||| ||||||||| |||||| ||  | ||||| | |||| |||||||||||| ||| ||| |||||||||    
T  22197694 gattaggcgtgatccggtgtcggacacgtgtcatgtccgaca-cgacactgacactgacacttgtaattacactaaattatgtgaatttttcaaattat 22197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 22943311 - 22943349
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtcc 169  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  22943311 ggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 22943349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 24362173 - 24362251
Alignment:
Q  152 cggacacgtgtcgtgtcc-gacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||||||||||||| |||||||||||||    ||||| |||||| ||||| |||||| ||||| | |||||||||    
T  24362173 cggacacgtgtcgtgtccggacaccgacacgacattgacacatataattacactgaattatgtgattctctcaaattat 24362251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 33405337 - 33405395
Alignment:
Q  123 acacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||| |||||||||| ||||||| | |||| |||| ||||||||||||||||||||||    
T  33405337 acactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacac 33405395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 40332288 - 40332239
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||| |||||| ||| ||||||||||||||||| ||||||||||    
T  40332288 ggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacac 40332239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 926767 - 926799
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||||||||| |||||||||||||||    
T  926767 gtgtcggacacgtgtcgcgtccgacaccgacac 926799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 105
Target Start/End: Complemental strand, 13436954 - 13436922
Alignment:
Q  73 cgacaccgggacacgcctaatccaagaagtgtc 105  Q
    |||||||||||||||||||||||||| ||||||    
T  13436954 cgacaccgggacacgcctaatccaaggagtgtc 13436922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 24858134 - 24858070
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacac 174  Q
    |||||||||||||||||  |  ||||||||||||||| | || |||||| |||||||||||||||    
T  24858134 tatgaagcacaaacactcctctgattaggcgtgtcccggcgtgggacacatgtcgtgtccgacac 24858070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 25172675 - 25172747
Alignment:
Q  157 acgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||| ||||||||||||  |||||||  ||||||| |||||| ||| |||| ||| | |||||||||||||||    
T  25172675 acgtatcgtgtccgacattgacacgacaccgacacatataattacattaaaatatgtaattttatcaaattat 25172747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 31557095 - 31557047
Alignment:
Q  130 ttggattaggcgtgtcc-cgtgtcggacacgtgtcgtgtccgacaccga 177  Q
    |||||||||||||||||  |||||||||| |||||||||| ||||||||    
T  31557095 ttggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccga 31557047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 123 - 229
Target Start/End: Original strand, 9629842 - 9629949
Alignment:
Q  123 acacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttat 221  Q
    |||||| |||||  || ||||||||| ||||||||| ||||||||||||||| ||||||||  ||||||| |||||||||||| ||||||||||||||||    
T  9629842 acacttcttggacgagacgtgtcccggtgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttat 9629941  T
Q  222 caaattat 229  Q
    ||||||||    
T  9629942 caaattat 9629949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 9828173 - 9828054
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||  | ||||||| ||||||||| |||||||||||||||||||| ||||| |||||||  ||||||| || ||| ||||| ||||    
T  9828173 tatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaatt 9828074  T
Q  210 atatgattttatcaaattat 229  Q
    || |||||||||||||||||    
T  9828073 atgtgattttatcaaattat 9828054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 32461394 - 32461512
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||| |  || |||| | |||| ||| ||||||    
T  32461394 tatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac-acaccaacacttgtaattacattaaatt 32461492  T
Q  210 atatgattttatcaaattat 229  Q
    || ||||||| |||||||||    
T  32461493 atgtgattttttcaaattat 32461512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 47989626 - 47989507
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||  | ||||||||||||||||| |||| |||| ||||||||||||||||||||||||  ||||||| | |||| ||||| ||||    
T  47989626 tatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaatt 47989527  T
Q  210 atatgattttatcaaattat 229  Q
    || ||||||| | |||||||    
T  47989526 atgtgatttttttaaattat 47989507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 1486646 - 1486758
Alignment:
Q  112 atgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatta 210  Q
    |||||||||| |||||  | ||||||||||||||||| ||||||||||||||||||||||||| |||||     ||||||| |||||| ||||| |||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgaca-cgaca-----ccgacacttataattacactgaatta 1486739  T
Q  211 tatgattttatcaaattat 229  Q
    | ||||||| |||||||||    
T  1486740 tgtgattttttcaaattat 1486758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 204
Target Start/End: Complemental strand, 25934745 - 25934651
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacact 204  Q
    ||||||||||  |||||  |||||| |||||| |||| ||||| |||||||||||||||||||||||||||||  ||||||| |||||| |||||    
T  25934745 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacact 25934651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 34371844 - 34371728
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg---tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaa 207  Q
    |||||||||||||||||| ||||||| | |||||| ||   | | ||||||||||||| ||||||||| ||||||  ||||||| |||||| ||||| ||    
T  34371844 tatgaagcacaaacactttttggatttgacgtgtctcggtatattggacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaa 34371745  T
Q  208 ttatatgattttatcaa 224  Q
    |||| ||||||| ||||    
T  34371744 ttatgtgattttctcaa 34371728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 44482310 - 44482240
Alignment:
Q  159 gtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||||||||||||||  ||||||| |||||| ||||| |||||| ||||||| |||||||||    
T  44482310 gtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 5944412 - 5944303
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    |||||||||| ||||||  | ||||||||||| |||| |||||||||| |||| ||||||| || ||||||||  ||||||| |||||| ||||| ||||    
T  5944412 tatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaatt 5944313  T
Q  210 atatgatttt 219  Q
    || |||||||    
T  5944312 atgtgatttt 5944303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 6612120 - 6612220
Alignment:
Q  130 ttggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaatta 228  Q
    ||||||||||||||||| | |||||||||| | |||||||||||| ||||||||  ||||||| | |||| ||||| |||||| | ||||| ||||||||    
T  6612120 ttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaatta 6612219  T
Q  229 t 229  Q
    |    
T  6612220 t 6612220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 25362011 - 25361896
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccgtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatta 210  Q
    ||||||||||  |||||  | |||||||| || ||| ||||||||||  |||||||||||||||||||||||  | ||||| |||||| ||||| |||||    
T  25362011 tatgaagcacggacactcttcggattaggtgt-tccggtgtcggaca--tgtcgtgtccgacaccgacacgacactgacacatataattacactgaatta 25361915  T
Q  211 tatgattttatcaaattat 229  Q
    | ||||||| |||||||||    
T  25361914 tgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 40917857 - 40917806
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacga 182  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  40917857 ggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacga 40917806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 37598949 - 37598879
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccgt-gtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||  | |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  37598949 tatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacac 37598879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 51410143 - 51410073
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||| || |||  |||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  51410143 tatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacac 51410073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 6427593 - 6427521
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacga 182  Q
    ||||||||||  ||||| ||  |||||||||||||||| |||||||||||||||||||||||| || ||||||    
T  6427593 tatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacga 6427521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 21032335 - 21032263
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacga 182  Q
    ||||||||||| |||||  ||||||||||||| || || |||||||||| |||||||||||||||| ||||||    
T  21032335 tatgaagcacagacactccttggattaggcgtctctcgatgtcggacacatgtcgtgtccgacacccacacga 21032263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 16164245 - 16164364
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    |||||| |||| |||||  | ||||||||||||||| | |||||||||||||| | |||| ||||| ||||||    ||||| |||||| ||| ||||||    
T  16164245 tatgaaacacatacactcttcggattaggcgtgtcctggtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaatt 16164344  T
Q  210 atatgattttatcaaattat 229  Q
    || ||||||| |||||||||    
T  16164345 atgtgattttttcaaattat 16164364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 18556386 - 18556505
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||| | |||||||||||||||| |||||||| |||||||| ||| ||||||| |||||  || | || | |||| ||| ||||||    
T  18556386 tatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaatt 18556485  T
Q  210 atatgattttatcaaattat 229  Q
    || |||| || |||||||||    
T  18556486 atgtgatattttcaaattat 18556505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 34741964 - 34741894
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccgtgtcggacacg-tgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||  | |||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  34741964 tatgaagcacggacactcttcggattaggcgtgtcccgtgtcggacacgttgtcgtgtcagacaccaacac 34741894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 29163323 - 29163392
Alignment:
Q  112 atgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||| ||||||| |  |||||| ||||||||| |||| | |||||||||||||||||||||||||    
T  29163323 atgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacac 29163392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 31015136 - 31015091
Alignment:
Q  130 ttggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacac 174  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||    
T  31015136 ttggattaggcgtgtcccgatgtcagacacgtgtcgtgtccgacac 31015091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 46348345 - 46348394
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||| ||||||||| || ||||||||||||||||||||||||||||||||    
T  46348345 ggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 46348394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 1815353 - 1815305
Alignment:
Q  133 gattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  1815353 gattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacac 1815305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 204
Target Start/End: Complemental strand, 17778670 - 17778581
Alignment:
Q  112 atgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacact 204  Q
    ||||||||| ||||||| | ||||||||| ||||||| ||||||||||||||||    ||||||||||||||  ||||||| | |||| |||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcg----cgacaccgacacgacaccgacacttgtaattacact 17778581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 229
Target Start/End: Original strand, 17831485 - 17831580
Alignment:
Q  133 gattaggcgtgtccc-gtgtcggacacgtgtc-gtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||| |||||||   |||||| ||| || ||||| ||| || ||||||| |||||||||    
T  17831485 gattaggcgtgtcccggtgtcggacacatgtcggtgtccgacactgacacga---cgacacatatgattacactgaataatgtgattttctcaaattat 17831580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 9690214 - 9690285
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtc-gtgtccgacaccgacac 180  Q
    |||||||||||||||||    |||||||||||||||| |||||||||||||||| ||| ||||| |||||||    
T  9690214 tatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtcagtggccgacgccgacac 9690285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 32461436 - 32461401
Alignment:
Q  74 gacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    ||||| ||||||||||||||||||||||||||||||    
T  32461436 gacactgggacacgcctaatccaagaagtgtccgtg 32461401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 12919063 - 12918993
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||| ||||||| | |||| || |||||||| ||||| |||||||||||||||||| ||| ||||    
T  12919063 tatgaagcacgaacacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtccgataccaacac 12918993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 18337447 - 18337377
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||  | |||| |||| |||||| ||||||||||||||| |||||||||||||||||    
T  18337447 tatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacac 18337377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 22515828 - 22515898
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||  | |||||||||||||| || ||||||| | ||||||||||||||||||||||    
T  22515828 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacac 22515898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 40181968 - 40181922
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccga 177  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  40181968 ggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccga 40181922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 41597411 - 41597481
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||| |||||  |||||| | |||| |||| ||||| ||||||||||||||||||||| |||||    
T  41597411 tatgaagcacagacactccttggataaagcgtatccccgtgtcagacacgtgtcgtgtccgacacggacac 41597481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 18556430 - 18556393
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  18556430 ccgacactgggacacgcctaatccgagaagtgtccgtg 18556393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 28273065 - 28273134
Alignment:
Q  157 acgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaat 226  Q
    ||||||||||||||||| ||| | ||  ||||||| | |||| ||||| |||||||||||||| ||||||    
T  28273065 acgtgtcgtgtccgacatcgataggacaccgacacttgtaattacactgaattatatgattttttcaaat 28273134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 40258895 - 40258944
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||||||||    
T  40258895 ggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacac 40258944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 42359434 - 42359397
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||||||||||| || ||||||||||    
T  42359434 ccgacaccgggacacgcctaatccgaggagtgtccgtg 42359397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 42359411 - 42359460
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||||||||| ||||||||||  ||| ||||||||||||||||    
T  42359411 ggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacac 42359460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 351060 - 351028
Alignment:
Q  75 acaccgggacacgcctaatccaagaagtgtccg 107  Q
    |||||||||||||||||||||||| ||||||||    
T  351060 acaccgggacacgcctaatccaaggagtgtccg 351028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 6574048 - 6574088
Alignment:
Q  69 acaccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||| ||||||||||||||||||| |||| |||||    
T  6574048 acaccgacactgggacacgcctaatccaaggagtgaccgtg 6574088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 21530769 - 21530737
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||| ||||||||||||||||||||||    
T  21530769 gtgtcggacatgtgtcgtgtccgacaccgacac 21530737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 36878515 - 36878471
Alignment:
Q  185 ccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||||||||| ||||| |||||| ||||||| |||||||||    
T  36878515 ccgacacctataattacactgaattatgtgattttctcaaattat 36878471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 46348388 - 46348432
Alignment:
Q  185 ccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||| | |||| |||||||||||||||||||| |||||||||    
T  46348388 ccgacacttgtaattacactaaattatatgattttttcaaattat 46348432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 52903303 - 52903259
Alignment:
Q  185 ccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||| |||||| ||||| |||||||||||||||| |||||||    
T  52903303 ccgacacatataattacactgaattatatgattttattaaattat 52903259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 111 - 226
Target Start/End: Original strand, 30982808 - 30982924
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||  ||||||||||||||||||| |||||||||||||||||||| |||||||||||||  ||||||| |||||| ||||| || |    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaat 30982907  T
Q  210 atatgattttatcaaat 226  Q
    || ||||||| ||||||    
T  30982908 atgtgattttctcaaat 30982924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 30838301 - 30838220
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||||||| ||||||||| |||||||  |||| || |||||| |||||||||||||| |||||||||||||||    
T  30838301 gtgtcggacacgtgtcgcgtccgacactgacacgacaccgatacttataattacactaaattatataattttatcaaattat 30838220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 22234820 - 22234929
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    |||||||||| ||||||| | |||||||  |||||| | |||||||||||||||||||| |||||||||||||  ||||||| || ||| ||||| ||||    
T  22234820 tatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaatt 22234919  T
Q  210 atatgatttt 219  Q
    || |||||||    
T  22234920 atgtgatttt 22234929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 23292927 - 23292997
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||  | ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23292927 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 23292997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 19482797 - 19482678
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    |||||||||| ||||||  | |||||||| ||||||| |||||||||||||||||||||| | ||||||||||  || |||| | |||| ||||  ||||    
T  19482797 tatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaatt 19482698  T
Q  210 atatgattttatcaaattat 229  Q
    || |||| || |||||||||    
T  19482697 atgtgatattttcaaattat 19482678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 12895215 - 12895285
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||| ||||||  | ||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  12895215 tatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacac 12895285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 21873309 - 21873420
Alignment:
Q  117 gcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatga 215  Q
    |||||||||||  ||||||||| ||||||||| |||||||||||||||  |||||| ||| ||||||  ||| |||  |||||  |||| |||||| |||    
T  21873309 gcacaaacactccttggattagacgtgtcccggtgtcggacacgtgtcacgtccgagaccaacacgataccggcac--ataatttcactgaattatgtga 21873406  T
Q  216 ttttatcaaattat 229  Q
    ||||||||||||||    
T  21873407 ttttatcaaattat 21873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 21929170 - 21929281
Alignment:
Q  117 gcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatga 215  Q
    |||||||||||  ||||||||| ||||||||| |||||||||||||||  |||||| ||| ||||||  ||| |||  |||||  |||| |||||| |||    
T  21929170 gcacaaacactccttggattagacgtgtcccggtgtcggacacgtgtcacgtccgagaccaacacgataccggcac--ataatttcactgaattatgtga 21929267  T
Q  216 ttttatcaaattat 229  Q
    ||||||||||||||    
T  21929268 ttttatcaaattat 21929281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 904032 - 903932
Alignment:
Q  130 ttggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaatta 228  Q
    |||||||||  ||||||| ||||||||||| |||||||||| ||||||| ||||  | || || |||||| ||||| |||||| ||||||| ||||||||    
T  904032 ttggattagatgtgtcccagtgtcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgattttctcaaatta 903933  T
Q  229 t 229  Q
    |    
T  903932 t 903932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 34306767 - 34306815
Alignment:
Q  133 gattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  34306767 gattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 34306815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 204
Target Start/End: Original strand, 5414102 - 5414196
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacact 204  Q
    ||||||||||  |||||  |||||| ||| ||||||| ||||| ||||||||||||||||||||| |||||||  |||| || |||||| |||||    
T  5414102 tatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacact 5414196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 40742667 - 40742601
Alignment:
Q  163 cgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||| |||||||||||||   |||||| |||||| |||||| ||||||||||||| |||||||||    
T  40742667 cgtgtctgacaccgacacgacatcgacacatataattacactagattatatgattttctcaaattat 40742601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 46083947 - 46084029
Alignment:
Q  137 aggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattt 218  Q
    ||||||||||| | ||| |||||||||||||||||| || |||||||  ||||||| |||||| |||||| ||||| ||||||    
T  46083947 aggcgtgtccccgcgtcagacacgtgtcgtgtccgatactgacacgacaccgacacatataattacactagattatgtgattt 46084029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 49431123 - 49431074
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||||||    
T  49431123 ggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacac 49431074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 16184949 - 16184877
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacga 182  Q
    |||||||||||||||||  | |||||||||||||||| |||||||||| |  |||| | ||||||||||||||    
T  16184949 tatgaagcacaaacactcctcggattaggcgtgtcccagtgtcggacaggcatcgtatgcgacaccgacacga 16184877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 8423681 - 8423728
Alignment:
Q  133 gattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgaca 179  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||||    
T  8423681 gattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgaca 8423728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 19312426 - 19312355
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgatttt 219  Q
    |||||||||||||||||| ||||||| ||||||||  |||| || |||||| ||||| ||| || |||||||    
T  19312426 gtgtcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatcatgtgatttt 19312355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 24613631 - 24613750
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||  | ||||||| ||||||| | |||| ||||||||||||||| |||||||||| ||  ||||||| | || | ||| | ||||    
T  24613631 tatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaatt 24613730  T
Q  210 atatgattttatcaaattat 229  Q
    || ||||||| |||||||||    
T  24613731 atgtgattttctcaaattat 24613750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 29205586 - 29205527
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtcc 169  Q
    |||||||||| ||||||  | |||||||||||||||| |||||||||| |||||||||||    
T  29205586 tatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 29205527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 36635448 - 36635334
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||  | |||||||||||||||| ||||| ||| ||||||||||| |||||  ||||||     |||| |||||| ||||| ||||    
T  36635448 tatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacacga-----acacatataattacactgaatt 36635354  T
Q  210 atatgattttatcaaattat 229  Q
    || ||||||| |||||||||    
T  36635353 atgtgattttctcaaattat 36635334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 7012158 - 7012076
Alignment:
Q  148 gtgtcggacacgtgtcg-tgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||| ||| |||| |||||||||||||||| |  |||| |||||| |||||||| |||||| | ||||| |||||||||    
T  7012158 gtgtcggatacgcgtcggtgtccgacaccgacacaacaccgatacctatgatcacactgaattatgtcattttctcaaattat 7012076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 162
Target Start/End: Original strand, 11326593 - 11326623
Alignment:
Q  132 ggattaggcgtgtcccgtgtcggacacgtgt 162  Q
    |||||||||||||||||||||||||||||||    
T  11326593 ggattaggcgtgtcccgtgtcggacacgtgt 11326623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 35161154 - 35161092
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgac 172  Q
    ||||||||||  |||||| | |||||||| |||| ||| ||||||||||||||||||||||||    
T  35161154 tatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgac 35161092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 3947701 - 3947766
Alignment:
Q  110 ttatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacac 174  Q
    |||||||||||  |||||  | |||||||| |||||| | ||||||||||||||||||||||||||    
T  3947701 ttatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacac 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 8423703 - 8423666
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||||||||||  |||||||||||||    
T  8423703 ccgacaccgggacacgcctaatcggagaagtgtccgtg 8423666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 23292971 - 23292934
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||||||||||| || ||||||||||    
T  23292971 ccgacaccgggacacgcctaatccgaggagtgtccgtg 23292934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 229
Target Start/End: Original strand, 27706129 - 27706226
Alignment:
Q  133 gattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||||||||||| | ||||| |||||||||||||||||   ||||||  |  |||| | |||| |||||||||||| ||||||| | |||||||    
T  27706129 gattaggcgtgtcccggtatcggatacgtgtcgtgtccgacattaacacgacactcacacttgtaattacactaaattatgtgatttttttaaattat 27706226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 28964210 - 28964259
Alignment:
Q  132 ggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||||||||| |||||||| | |||||||||||||||| |||||    
T  28964210 ggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacac 28964259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 30982852 - 30982815
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  30982852 ccgacaccgggacacgcctaatccaaagagtgtccgtg 30982815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 37203326 - 37203363
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  37203326 ccgacaccgggacacgtctaatccgagaagtgtccgtg 37203363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 848039 - 848075
Alignment:
Q  75 acaccgggacacgcctaatccaagaagtgtccgtgtt 111  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  848039 acaccgggacacacctaatccaaggagtgtccgtgtt 848075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 4157229 - 4157197
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||| ||||||||||||||||||||||    
T  4157229 gtgtcggacatgtgtcgtgtccgacaccgacac 4157197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 4157516 - 4157484
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||| ||||||||||||||||||||||    
T  4157516 gtgtcggacatgtgtcgtgtccgacaccgacac 4157484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 8402703 - 8402747
Alignment:
Q  130 ttggattaggcgtgtcccgtgtcggacacgtgtcgtgtccgacac 174  Q
    ||||||||||| ||||| |||||||||| |||||||||| |||||    
T  8402703 ttggattaggcatgtcctgtgtcggacaagtgtcgtgtctgacac 8402747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 180
Target Start/End: Original strand, 54580006 - 54580034
Alignment:
Q  152 cggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||||||||||||||||||||||    
T  54580006 cggacacgtgtcgtgtccgacaccgacac 54580034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 9e-23; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 16766805 - 16766707
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||| | |||| ||||| |||||| ||||||| |||||||||    
T  16766805 ggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 16766707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 8365470 - 8365568
Alignment:
Q  132 ggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||  ||||||| | |||| ||||  |||||| |||| || |||||||||    
T  8365470 ggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattat 8365568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 204
Target Start/End: Original strand, 16488520 - 16488614
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacact 204  Q
    |||||||||| |||| |  |||||| ||||||||||| ||| | |||||||||||||||||||||||||||||  ||||||| |||||| |||||    
T  16488520 tatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacact 16488614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 28152216 - 28152146
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||| ||||||  | ||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  28152216 tatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 28152146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 4878060 - 4877991
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccgtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||  | ||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  4878060 tatgaagcacggacactcctcggattaggcgtgtcctgtgtcggacatgtgtcgtgtccgacaccgacac 4877991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 10339077 - 10339174
Alignment:
Q  133 gattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataa-tcacactaaattatatgattttatcaaatta 228  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||   | ||||| ||||| | ||||| |||||| ||||||| ||||||||    
T  10339077 gattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaattatgtgattttctcaaatta 10339174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 9523001 - 9522901
Alignment:
Q  130 ttggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaatta 228  Q
    |||||||||||||||| || ||||||||||||||||  |||||||||||||| |  ||||||| | |||| ||||| |||||| ||||||| | ||||||    
T  9523001 ttggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaatta 9522902  T
Q  229 t 229  Q
    |    
T  9522901 t 9522901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 229
Target Start/End: Complemental strand, 31385049 - 31384930
Alignment:
Q  110 ttatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaat 208  Q
    |||||||||||  |||||  |||||||||||||||||| |||| ||||||||||||||||| ||| | ||||||  | ||||| | |||| ||||| |||    
T  31385049 ttatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaaca-ctacacgacactgacacttgtaattacactgaat 31384951  T
Q  209 tatatgattttatcaaattat 229  Q
    ||| ||||||| |||||||||    
T  31384950 tatgtgattttttcaaattat 31384930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 192
Target Start/End: Complemental strand, 3209517 - 3209435
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcc-cgtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacc 192  Q
    |||||||||||||||||  | |||||||||||||||  ||||||||| |||||||||| |||||| |||||||  ||||||||    
T  3209517 tatgaagcacaaacactcctcggattaggcgtgtccgggtgtcggacgcgtgtcgtgttcgacactgacacgacaccgacacc 3209435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 5970059 - 5970157
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||| ||||||||||| ||||||| | ||||||||||||||||||||||||  || |||  | |||| ||||| |||||| ||||||| |||||||||    
T  5970059 ggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattat 5970157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 9107321 - 9107419
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||| |||||||| ||||||||||  || |||||||||||||||||||  ||||||| | |||| ||||| |||| | ||||||| |||||||||    
T  9107321 ggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattat 9107419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 204
Target Start/End: Complemental strand, 18367965 - 18367871
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacact 204  Q
    ||||||||||  |||||  |||||| ||||||||||| ||||| |||| |||||||||| |||||||||||||  ||||||| |||||| |||||    
T  18367965 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacact 18367871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 28715413 - 28715343
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||| | | ||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  28715413 tatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacac 28715343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 33001230 - 33001300
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||||||||||  ||||||||||||| |  || |||| |||||||||||||||||||||||||||    
T  33001230 tatgaagcacaaacactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacac 33001300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 9195727 - 9195803
Alignment:
Q  153 ggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||| ||||||||| |||||| ||||||  ||||||| |||||| |||||||||||| | ||||| |||||||||    
T  9195727 ggacacatgtcgtgtcagacacctacacgacaccgacacatataattacactaaattatgtcattttctcaaattat 9195803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 10842606 - 10842542
Alignment:
Q  165 tgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||||||| || |||||| ||| || |||||||||||| ||||||| |||||||||    
T  10842606 tgtccgacaccgacacgtgttcgacacatatgattacactaaattatgtgattttttcaaattat 10842542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 32978842 - 32978910
Alignment:
Q  113 tgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||  |||||  ||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 32978910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 21223715 - 21223805
Alignment:
Q  130 ttggattaggcgtgtcccgt-gtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgatttt 219  Q
    |||||||||||||| ||||| |||||||||| || |||| ||||||||||||||  | ||||  |||||| ||||  ||||||||||||||    
T  21223715 ttggattaggcgtgacccgttgtcggacacgcgttgtgttcgacaccgacacgacactgacatatataattacacataattatatgatttt 21223805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 34595252 - 34595182
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||  | |||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  34595252 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacac 34595182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 8714109 - 8714000
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||| | |||||  | ||||| ||||||||||| ||||||| | ||||||||||||||||||||||||  || |||  | |||| ||||| ||||    
T  8714109 tatgaagcaaagacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaatt 8714010  T
Q  210 atatgatttt 219  Q
    || |||||||    
T  8714009 atgtgatttt 8714000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 9025490 - 9025453
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||||||||||| |||||||||||||    
T  9025490 ccgacaccgggacacgcctaatccgagaagtgtccgtg 9025453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 10888982 - 10889023
Alignment:
Q  188 acacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  10888982 acacatataatcacactaaattatgtgattttatcaaattat 10889023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 12868617 - 12868691
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtg-tcccgtgtcggaca----cgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||||| |||||||||||| ||||||||||||||    | |||||||||||||||||||||    
T  12868617 tatgaagcaccgacacttatcggattaggcgtgttcccgtgtcggacatgtgcatgtcgtgtccgacaccgacac 12868691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 25038039 - 25038120
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||||||||||| |||||| |||| |  ||||||  | |||| |||||||||||| | ||||| |||||||||    
T  25038039 gtgtcggacacgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaattatgtaattttctcaaattat 25038120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 7248487 - 7248379
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||  | ||||| | ||||||||| |||||||||| ||| |||||| |||||||||||| ||| |||| |||||| || || ||||    
T  7248487 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 7248388  T
Q  210 atatgattt 218  Q
    || ||||||    
T  7248387 atgtgattt 7248379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 7938170 - 7938126
Alignment:
Q  185 ccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||| |||||| |||||||||||||||||||| |||||||||    
T  7938170 ccgacacttataattacactaaattatatgattttttcaaattat 7938126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 17327591 - 17327655
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacac 174  Q
    ||||||||||  |||||  | |||||||||||||||| ||||| |||||||||||||||||||||    
T  17327591 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacac 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 26562777 - 26562701
Alignment:
Q  151 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaatt 227  Q
    ||||||| ||| ||||| ||||||||||||||   |||||| |||||| ||||| |||||| ||||||| |||||||    
T  26562777 tcggacatgtgccgtgttcgacaccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatt 26562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 12696446 - 12696383
Alignment:
Q  112 atgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacac 174  Q
    |||||||||| |||||  |||||| ||| |||||||| |||| |||||||||||||||||||||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacac 12696383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 853812 - 853870
Alignment:
Q  123 acacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||| ||||||||||||||||| |  |||||||||| |||||| ||||||||||||||    
T  853812 acactcattggattaggcgtgtctctatgtcggacacatgtcgtatccgacaccgacac 853870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 6898222 - 6898292
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtg-tcccgtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||| |||||| || |||||||||||| | | |||| |||||||  |||||||||||||||||||    
T  6898222 tatgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacac 6898292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 17841530 - 17841596
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccg 176  Q
    ||||||||||  |||||  | |||||||||||||| | ||||||||||| |||||||||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccg 17841596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 24645599 - 24645529
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||| |||||  | ||||||| ||||||  | |||||||||||||||||||| |||||||||||    
T  24645599 tatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacac 24645529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 31385007 - 31385041
Alignment:
Q  75 acaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||||||||||| ||||||||||    
T  31385007 acaccgggacacgcctaatccaaggagtgtccgtg 31385041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 9027285 - 9027236
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacg 159  Q
    |||||||||||||||||  ||||||||| |||||||| ||||||||||||    
T  9027285 tatgaagcacaaacactccttggattagccgtgtcccggtgtcggacacg 9027236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 32978884 - 32978847
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  32978884 ccgacaccgggacacgtctaatccaaggagtgtccgtg 32978847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 229
Target Start/End: Original strand, 34447378 - 34447407
Alignment:
Q  200 acactaaattatatgattttatcaaattat 229  Q
    ||||||||||||||||||||||||||||||    
T  34447378 acactaaattatatgattttatcaaattat 34447407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 7086849 - 7086805
Alignment:
Q  185 ccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||| |||||| |||||||||||| ||||||| |||||||||    
T  7086849 ccgacacatataattacactaaattatgtgattttctcaaattat 7086805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 26178686 - 26178730
Alignment:
Q  185 ccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||| ||| || |||||||||||| |||||||||||||||||    
T  26178686 ccgacacatatgattacactaaattatgtgattttatcaaattat 26178730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 1e-21; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 133 - 224
Target Start/End: Complemental strand, 35056975 - 35056883
Alignment:
Q  133 gattaggcgtgtc-ccgtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaa 224  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||  ||||||| |||||| ||||| ||||||||| |||| ||||    
T  35056975 gattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatatggttttctcaa 35056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 30717460 - 30717579
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||  ||||||||||||| |||| |||||| ||||||||||||||||||| ||||||||   |||||| | |||| ||||| ||||    
T  30717460 tatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 30717559  T
Q  210 atatgattttatcaaattat 229  Q
    || ||||||| |||||||||    
T  30717560 atgtgattttttcaaattat 30717579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 12224337 - 12224271
Alignment:
Q  115 aagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  12224337 aagcacaaacactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacac 12224271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 34784912 - 34785021
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||| |||||  | | || ||||||||||| ||||| |||| ||||||||||||| ||||||||||  ||||||| |||||| ||||||||||    
T  34784912 tatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaatt 34785011  T
Q  210 atatgatttt 219  Q
    || |||||||    
T  34785012 atgtgatttt 34785021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 22084757 - 22084881
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc----gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctat--aatcacact 204  Q
    ||||||||||| ||||| || ||||||||||||||||    ||||| ||||||||| ||||||||||| |||||||  ||| ||| |||  ||| |||||    
T  22084757 tatgaagcacagacactcatcggattaggcgtgtcccggtggtgtcagacacgtgttgtgtccgacactgacacgataccggcacatataaaattacact 22084856  T
Q  205 aaattatatgattttatcaaattat 229  Q
     |||||||||||||| |||||||||    
T  22084857 gaattatatgattttctcaaattat 22084881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 37419872 - 37419753
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||  | ||||||||||||||||| |||||||||||  |||||||||||||||||||||  ||| ||| | |||| ||||| ||||    
T  37419872 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaatt 37419773  T
Q  210 atatgattttatcaaattat 229  Q
     | ||||||| |||||||||    
T  37419772 ttgtgattttttcaaattat 37419753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 27286221 - 27286341
Alignment:
Q  110 ttatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaat 208  Q
    |||||||||||| |||||  || ||||||   ||||||| ||||||||| ||||||||||||||| ||||| ||    |||||||||||| ||||| |||    
T  27286221 ttatgaagcacagacactctttagattagatatgtcccggtgtcggacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaat 27286320  T
Q  209 tatatgattttatcaaattat 229  Q
    ||| |||| ||||||||||||    
T  27286321 tatgtgatcttatcaaattat 27286341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 26769640 - 26769521
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||  | |||||||||||||||| |||||||||||||||||||||||| ||||||| ||  ||||||| | |||| |||| | ||     
T  26769640 tatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacaccagata 26769541  T
Q  210 atatgattttatcaaattat 229  Q
    || |||| || |||||||||    
T  26769540 atgtgatattttcaaattat 26769521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 23354603 - 23354701
Alignment:
Q  132 ggattaggcgtgtcccgtgtcggacacgtgtcg-tgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||||||||||| |||||  |||| |||||||| |||||||     |||||||||| || |||||||||||||| ||||| |||||||||    
T  23354603 ggattaggcgtgtcccgtgtcagacaccggtcggtgtccgaccccgacaccgacacgacacctatgattacactaaattatatcattttctcaaattat 23354701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 24009413 - 24009343
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||  |||||| ||||||||||| ||||| |||||||||||||||||||||||||||    
T  24009413 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 24009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 2438681 - 2438730
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  2438681 ggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 2438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 4207947 - 4207867
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||| ||||||||||||||||||||||||||||  ||||||  |||||| ||||||||||||  | |||| |||||||||    
T  4207947 gtgtcgaacacgtgtcgtgtccgacaccgacacgataccgaca-atataattacactaaattatgcgcttttttcaaattat 4207867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 38919335 - 38919216
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccgtgtcggacacgtgtc-gtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    |||||||||||||||||  |  |||||| ||||||| ||||||||||||  || || |||||||||||||| |   |||||||||| || |||||||| |    
T  38919335 tatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacgcatcagtatccgacaccgacactaacacgacacctatgattacactaaact 38919236  T
Q  210 atatgattttatcaaattat 229  Q
    |||  ||||| |||||||||    
T  38919235 ataacattttctcaaattat 38919216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 20242668 - 20242738
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcc-cgtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||| |||||  | |||| |||||||||| |||||| ||||||||| |||||||||||||||||    
T  20242668 tatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacac 20242738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 28596587 - 28596517
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||  | |||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacac 28596517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 30527590 - 30527644
Alignment:
Q  175 cgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||  ||||||| |||||| |||||||||||||||||||| |||||||||    
T  30527590 cgacacgataccgacacatataattacactaaattatatgattttctcaaattat 30527644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 34993923 - 34993993
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||| ||||||  ||| |||||||||||||| ||||||||||| |||||||| |||||| |||||    
T  34993923 tatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacac 34993993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 204
Target Start/End: Original strand, 36096305 - 36096399
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacact 204  Q
    ||||||||||  |||||  |||| | ||||||||||| ||||| |||||||||||||||||||| ||||||||  ||||||  |||||| |||||    
T  36096305 tatgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacact 36096399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 15972970 - 15972921
Alignment:
Q  132 ggattaggcgtgtcccgt-gtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  15972970 ggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacac 15972921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 23058429 - 23058392
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||||||||||| |||||||||||||    
T  23058429 ccgacaccgggacacgcctaatccgagaagtgtccgtg 23058392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 38117121 - 38117170
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  38117121 ggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacac 38117170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 2331921 - 2331804
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcc-cgtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    |||||| |||| ||| | ||||||||||||||||||  ||||| ||||||||  ||| ||||||| |||||||  |||||||  ||||  ||||| ||||    
T  2331921 tatgaaacacagacattcattggattaggcgtgtcctggtgtcagacacgtgctgtgcccgacactgacacgacaccgacac--ataaatacactgaatt 2331824  T
Q  210 atatgattttatcaaattat 229  Q
    || ||||||| |||||||||    
T  2331823 atgtgattttctcaaattat 2331804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 27084365 - 27084272
Alignment:
Q  133 gattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||| || ||| ||||||||||||||||||||||||||| ||   |||||| |||    ||| | |||||||||||||| |||||||||    
T  27084365 gattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgacatgaaatcgacacttat----acattgaattatatgattttctcaaattat 27084272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 34691810 - 34691854
Alignment:
Q  185 ccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||| |||||| ||||| ||||||||||||||||||||||||    
T  34691810 ccgacacatataattacactgaattatatgattttatcaaattat 34691854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 34714222 - 34714266
Alignment:
Q  185 ccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||| |||||| ||||| ||||||||||||||||||||||||    
T  34714222 ccgacacatataattacactgaattatatgattttatcaaattat 34714266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 5040833 - 5040782
Alignment:
Q  130 ttggattaggcgtgtcccgt-gtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||| |||||||||||||  ||||||||| |||||||||||||||||||||    
T  5040833 ttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacac 5040782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 5367291 - 5367240
Alignment:
Q  130 ttggattaggcgtgtcccgt-gtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  5367291 ttggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacac 5367240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 226
Target Start/End: Original strand, 38355818 - 38355933
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccgtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatta 210  Q
    ||||||||||  |||||| | ||||||  ||| ||| |||| |||||||||| || ||| ||||| | | ||  ||||||| |||||||||||| |||||    
T  38355818 tatgaagcacggacacttttcggattaaccgtctccagtgttggacacgtgttgtatccaacaccaatatgacaccgacacatataatcacactgaatta 38355917  T
Q  211 tatgattttatcaaat 226  Q
    | ||||||| ||||||    
T  38355918 tgtgattttctcaaat 38355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 15657968 - 15657874
Alignment:
Q  136 taggcgtgtcccgt-gtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||||||||  ||||||||||||||| |||||||| | ||||||  ||||||  | |||| ||||| |||||| |||||||  ||||||||    
T  15657968 taggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaattatgtgatttttacaaattat 15657874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 18840954 - 18841024
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||  | |||||||| |||||||| ||||||||| |||||||||| |||||||||||    
T  18840954 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacac 18841024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 30404791 - 30404861
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||||||| ||| |  |||||||| ||||| | ||||||||| |||||||||||||| |||||||    
T  30404791 tatgaagcacaaacgcttctcagattaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgacac 30404861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 36756275 - 36756393
Alignment:
Q  112 atgaagcacaaacacttattggattaggcgtg-tcccgtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatta 210  Q
    |||||||||| |||||  | |||||||||||| | | |||||||||| |||| |||| ||||||  ||||||  ||||||| |||||| ||||| |||||    
T  36756275 atgaagcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaatta 36756374  T
Q  211 tatgattttatcaaattat 229  Q
    | | ||||  |||||||||    
T  36756375 tgttatttcttcaaattat 36756393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 2438704 - 2438667
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||||||||||| || ||||||||||    
T  2438704 ccgacaccgggacacgcctaatccgaggagtgtccgtg 2438667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 3414929 - 3414986
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgt 167  Q
    |||||||||  |||||||||| ||||||||||||||| |||||| | |||||||||||    
T  3414929 tatgaagcatgaacacttattagattaggcgtgtcccggtgtcgtatacgtgtcgtgt 3414986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 225
Target Start/End: Original strand, 11223816 - 11223908
Alignment:
Q  133 gattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaa 225  Q
    |||||||||||||||| |||| |||| ||||||||||||||||| ||| ||  ||||||| | |||| ||||| |||||| | ||||| |||||    
T  11223816 gattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaattatgttattttttcaaa 11223908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 37419828 - 37419865
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||||||||||| || ||||||||||    
T  37419828 ccgacaccgggacacgcctaatccgaggagtgtccgtg 37419865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 19942362 - 19942314
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgaca 179  Q
    ||||||||||||||||| |||| ||||| || |||||||||||||||||    
T  19942362 ggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 20539679 - 20539723
Alignment:
Q  185 ccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||| | |||| |||||||||||||||||||| |||||||||    
T  20539679 ccgacacttgtaattacactaaattatatgattttttcaaattat 20539723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 32749781 - 32749869
Alignment:
Q  137 aggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaa 224  Q
    ||||||||||| ||||||||||| ||||  |||||||| ||||||||  | ||||| ||| || ||||| |||||| ||||||| ||||    
T  32749781 aggcgtgtcccagtgtcggacacatgtcacgtccgacatcgacacgacactgacacttattattacactgaattatgtgattttctcaa 32749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 41843564 - 41843500
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacac 174  Q
    ||||||||||| |||||  | |||| | ||||||||| ||||||||||||||||| |||||||||    
T  41843564 tatgaagcacagacactcctcggataaagcgtgtccccgtgtcggacacgtgtcgcgtccgacac 41843500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 42511323 - 42511387
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacac 174  Q
    ||||||||||  |||||  | ||||||| |||||||| ||||||||||||||| |||||||||||    
T  42511323 tatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacac 42511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 229
Target Start/End: Complemental strand, 53297 - 53190
Alignment:
Q  123 acacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttat 221  Q
    |||||| ||||||||  ||||||||| ||||||||||||||| |||||||||||||||||   ||||||| |||||| ||||| |||||| ||||||| |    
T  53297 acacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttct 53198  T
Q  222 caaattat 229  Q
    ||||||||    
T  53197 caaattat 53190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 53265 - 53302
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  53265 ccgacaccgggacacgtttaatccaagaagtgtccgtg 53302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 6e-21; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 15796224 - 15796343
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    |||||||||| ||||||  ||||||||||||||| ||| ||| |||||||||| |||||||||||| ||||||  ||||||  | |||| ||||| ||||    
T  15796224 tatgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaatt 15796323  T
Q  210 atatgattttatcaaattat 229  Q
    |||||||||| |||||||||    
T  15796324 atatgattttttcaaattat 15796343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 8039765 - 8039884
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||| | |||  | |||||| |||||||||| ||||||||| || || ||||||||||||||||||  ||||||| |||||| ||||| ||||    
T  8039765 tatgaagcacagatactcttcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaatt 8039864  T
Q  210 atatgattttatcaaattat 229  Q
    |||| ||||| |||||||||    
T  8039865 atataattttctcaaattat 8039884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 14209242 - 14209123
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||| |||||||||| || ||||| ||||| ||||||||||||||||||||||||||||  | ||||| | |||| ||||| ||||    
T  14209242 tatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaatt 14209143  T
Q  210 atatgattttatcaaattat 229  Q
    || ||||||| | |||||||    
T  14209142 atgtgattttttaaaattat 14209123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 41961580 - 41961699
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||| | |||||||||||||||| |||||||||||||||||||||||| ||||||||||  ||||||| | |||| ||||  |||     
T  41961580 tatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaata 41961679  T
Q  210 atatgattttatcaaattat 229  Q
    || |||| || |||||||||    
T  41961680 atgtgatattttcaaattat 41961699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 4987242 - 4987340
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||   || |||| | |||| ||||| |||||| ||||||| |||||||||    
T  4987242 ggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattat 4987340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 16789117 - 16789022
Alignment:
Q  134 attaggcgtgtcccgtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||| ||||||||||| ||||| ||||| |||||||||| |||||||  || |||| |||||| ||||| |||||||||||||| | |||||||    
T  16789117 attaggtgtgtcccgtgttggacatgtgtcatgtccgacactgacacgacaccaacacttataattacactgaattatatgatttttttaaattat 16789022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 17005549 - 17005668
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    |||||||||||||||||  | |||||||  |||||| | |||| |||||||||  |||| |||||| |||| |  ||||||| |||||| ||||| ||||    
T  17005549 tatgaagcacaaacactcctcggattagaggtgtcctggtgtcagacacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaatt 17005648  T
Q  210 atatgattttatcaaattat 229  Q
    ||||||||||||||||||||    
T  17005649 atatgattttatcaaattat 17005668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 29508567 - 29508454
Alignment:
Q  112 atgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatta 210  Q
    |||||||||  |||||| ||||||||| ||||||||| ||||||||  ||||||||||||||||| |||      |||||| |||||| ||||| |||||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacaccaaca-----tcgacacatataattacactgaatta 29508473  T
Q  211 tatgattttatcaaattat 229  Q
    ||||||||| |||||||||    
T  29508472 tatgattttttcaaattat 29508454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 10955049 - 10955000
Alignment:
Q  132 ggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10955049 ggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacac 10955000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 14832205 - 14832109
Alignment:
Q  134 attaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||  | ||||| | |||| ||| | | |||| ||||||| |||||||||    
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattat 14832109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 14217021 - 14216902
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||| | |||||||| ||||||| |||||| ||||||||||||||||||||  ||||||  | ||||| | |||| ||||| ||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaatt 14216922  T
Q  210 atatgattttatcaaattat 229  Q
    ||||||| || | |||||||    
T  14216921 atatgatattttaaaattat 14216902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 14223150 - 14223031
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||| | |||||||| ||||||| |||||| ||||||||||||||||||||  ||||||  | ||||| | |||| ||||| ||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaatt 14223051  T
Q  210 atatgattttatcaaattat 229  Q
    ||||||| || | |||||||    
T  14223050 atatgatattttaaaattat 14223031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 7171619 - 7171549
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||| | |||||  |||||||||||||||| || ||||||||||||||||||||||||||| ||||    
T  7171619 tatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacac 7171549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 55401193 - 55401123
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||  | |||||||||||||| || ||||||||||||||||||||||||||||||||    
T  55401193 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 55401123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 40993297 - 40993346
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  40993297 ggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 40993346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 11666050 - 11665954
Alignment:
Q  134 attaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||| ||| | || |||||||||||||||  ||| | ||||||  ||||||| |||||| |||||||||| | |||||||||||||||||    
T  11666050 attaggcgtgttccgatatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgattttatcaaattat 11665954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 15864950 - 15864886
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccgtgtcggacacgtgtc-gtgtccgacac 174  Q
    ||||||||||  |||||  ||||||||||||||||||||||| |||||||||| |||||||||||    
T  15864950 tatgaagcacggacactctttggattaggcgtgtcccgtgtcagacacgtgtcggtgtccgacac 15864886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 25065007 - 25064922
Alignment:
Q  140 cgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaat 226  Q
    ||||||||| |||| |||||||||||||||||||||| ||||||  || ||||  ||||| |||||||||||| ||||||| ||||||    
T  25065007 cgtgtcccggtgtcagacacgtgtcgtgtccgacaccaacacgataccaacac--ataattacactaaattatgtgattttttcaaat 25064922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 34307716 - 34307788
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacga 182  Q
    ||||||||||| | | ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||    
T  34307716 tatgaagcacataaatttattggattaggcgtgtctcagtatcgaagacgtgtcgtgtccgacaccgacacga 34307788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 34185053 - 34185172
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||  | ||||||||||||||||| |||||||||| |||| |||||||||  |||||||  ||||||| | |||| ||||| ||||    
T  34185053 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaatt 34185152  T
Q  210 atatgattttatcaaattat 229  Q
     | ||||||| | |||||||    
T  34185153 gtgtgattttttgaaattat 34185172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 13845466 - 13845536
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtc-ccgtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||  |||||| ||||||||| ||||||| ||||||| |||||||||||||||||||    
T  13845466 tatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacac 13845536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 14223811 - 14223861
Alignment:
Q  133 gattaggcgtgtcccgtgtcggacacgtgtc-gtgtccgacaccgacacga 182  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||||||||    
T  14223811 gattaggcgtgtcccatgtcggacacgtgtcggtgtcggacaccgacacga 14223861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 28918102 - 28918049
Alignment:
Q  130 ttggattaggcgtgtccc-gtgtcggacacgtgtcgtgtc--cgacaccgacac 180  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||||||||||    
T  28918102 ttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacac 28918049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 15999995 - 15999958
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  15999995 ccgacaccgggacacgcctaatccaaggagtgtccgtg 15999958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 29508524 - 29508561
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||| |||||||||||||||||||||    
T  29508524 ccgacaccgggacacgtctaatccaagaagtgtccgtg 29508561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 229
Target Start/End: Complemental strand, 55213077 - 55212973
Alignment:
Q  125 acttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatca 223  Q
    |||| |||||||| ||||||| || |||||||||||||| ||| ||||||||||||| |  ||||||| | ||||  ||||||||||| ||||||| | |    
T  55213077 acttcttggattatgcgtgtctcggtgtcggacacgtgttgtgcccgacaccgacac-acaccgacacttgtaattgcactaaattatgtgattttttaa 55212979  T
Q  224 aattat 229  Q
    ||||||    
T  55212978 aattat 55212973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 28812644 - 28812525
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||| ||||| |||||  | ||||||||||||||| | ||||||||| || ||||||| |||||| ||||||  ||||||| | |||  ||||| ||||    
T  28812644 tatgaggcacagacactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaatt 28812545  T
Q  210 atatgattttatcaaattat 229  Q
    || ||||||  |||||||||    
T  28812544 atgtgatttcttcaaattat 28812525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 2941672 - 2941606
Alignment:
Q  115 aagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||| || |||||| |||| | ||||  |||| |||||||||||||||||||||||||||    
T  2941672 aagcacaaacatttcttggataaggcatatccccatgtcagacacgtgtcgtgtccgacaccgacac 2941606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 11252094 - 11252024
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||| |||||  | ||||||||||||| ||| || ||||||||||| ||||| |||||||||||    
T  11252094 tatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacac 11252024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 15999970 - 16000008
Alignment:
Q  130 ttggattaggcgtgtcccg-tgtcggacacgtgtcgtgt 167  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  15999970 ttggattaggcgtgtcccggtgtcggacacgtgtcgtgt 16000008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 20503583 - 20503513
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||  | ||||||||||||||||| |||| |||| ||||||||||| ||||||||||    
T  20503583 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacac 20503513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 1509614 - 1509549
Alignment:
Q  164 gtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||| |||||||| ||||  ||||||| | |||| |||||||||||| ||||||| |||||||||    
T  1509614 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 1509549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 21211412 - 21211339
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtc-gtgtccgacaccgacacga 182  Q
    |||||||||||||||||  | |||||||| ||||||| |||||||||||| ||| |||||  ||||||||||||    
T  21211412 tatgaagcacaaacactcctcggattaggagtgtcccagtgtcggacacgcgtcggtgtcgaacaccgacacga 21211339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 229
Target Start/End: Original strand, 23870571 - 23870608
Alignment:
Q  192 ctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  23870571 ctataatcacactgaattatatgattttttcaaattat 23870608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 34185097 - 34185060
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    |||||||||||||||||||||||| || ||||||||||    
T  34185097 ccgacaccgggacacgcctaatccgaggagtgtccgtg 34185060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 41961624 - 41961587
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  41961624 ccgacactgggacacgcctaatccgagaagtgtccgtg 41961587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 49651761 - 49651724
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  49651761 ccgacaccgggacacacctaatccgagaagtgtccgtg 49651724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 4987265 - 4987229
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgt 108  Q
    |||||||||||||||||||||||| || |||||||||    
T  4987265 ccgacaccgggacacgcctaatccgaggagtgtccgt 4987229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 8383311 - 8383267
Alignment:
Q  185 ccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||| |||||| ||||| |||||||||||||| |||||||||    
T  8383311 ccgacacttataattacactgaattatatgattttctcaaattat 8383267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 27505369 - 27505305
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacac 174  Q
    ||||||||||  |||||  | ||||||||| ||||||| |||||||||||||||||||| |||||    
T  27505369 tatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacac 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 45451633 - 45451601
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||| ||||||||||||||||||||||    
T  45451633 gtgtcggacatgtgtcgtgtccgacaccgacac 45451601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 229
Target Start/End: Complemental strand, 43554632 - 43554531
Alignment:
Q  123 acacttattggattaggcgtgtcccgtgtcggacacgtgtc-gtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttat 221  Q
    |||||| | |||||||||||||||||||||||||||| ||| ||||||||||||||||      |||||||||| || |||||||||||||| ||||| |    
T  43554632 acacttctcggattaggcgtgtcccgtgtcggacacgcgtcggtgtccgacaccgaca------cgacacctatgattacactaaattatatcattttct 43554539  T
Q  222 caaattat 229  Q
    ||||||||    
T  43554538 caaattat 43554531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 36642716 - 36642811
Alignment:
Q  134 attaggcgtgtcccgtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||| |||| | |||||||| ||| | | ||| |||||||||    
T  36642716 attaggcgtgtcccgtgtcggacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacactaaaatatgtcactttttcaaattat 36642811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 21542140 - 21542058
Alignment:
Q  130 ttggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattat 211  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||  ||||||| | |||| ||||| ||||||    
T  21542140 ttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattat 21542058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 21522860 - 21522760
Alignment:
Q  130 ttggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaatta 228  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||  ||||||  | |||| ||||| |||||| | ||||| | ||||||    
T  21522860 ttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaatta 21522761  T
Q  229 t 229  Q
    |    
T  21522760 t 21522760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 21533426 - 21533326
Alignment:
Q  130 ttggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaatta 228  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||  ||||||  | |||| ||||| |||||| | ||||| | ||||||    
T  21533426 ttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaatta 21533327  T
Q  229 t 229  Q
    |    
T  21533326 t 21533326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 39698670 - 39698551
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||  | |||||||||||||| || ||||||| || |||||||||||||||||||||||  | ||||| | |||| ||||| ||||    
T  39698670 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaatt 39698571  T
Q  210 atatgattttatcaaattat 229  Q
    || ||||||| |||||||||    
T  39698570 atgtgattttttcaaattat 39698551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 7677813 - 7677715
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||||||| ||||||||| ||| |||||| |||||||||||||  ||||||| | ||||  |||| |||||| ||||||| |||||||||    
T  7677813 ggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattat 7677715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 204
Target Start/End: Complemental strand, 21814390 - 21814296
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacact 204  Q
    |||||||||| |||| |  |||||| ||||||||||| ||| | |||||||||||||||||||||||||||||  ||||||| |||||| |||||    
T  21814390 tatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacact 21814296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 110 - 204
Target Start/End: Complemental strand, 6401628 - 6401533
Alignment:
Q  110 ttatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacact 204  Q
    |||||||||||  |||||  |||||| |||||| |||| ||||| ||||||||||||||||||||| |||||||  ||||||| |||||| |||||    
T  6401628 ttatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacact 6401533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 19579809 - 19579711
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||||||| |||  ||||  ||||||||||||||| |||||||  ||||||| | ||||  ||||||||||| ||||||| |||||||||    
T  19579809 ggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattat 19579711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 30098434 - 30098336
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||| |||||| | |||| ||||||||||||||||||||| ||| |||  |||||| ||||||| ||| | |||||| ||||||| |||||||||    
T  30098434 ggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacactgactcgataccgacatctataattacattgaattatgtgattttctcaaattat 30098336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 43564999 - 43564929
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccgt-gtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||| | |||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  43564999 tatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacac 43564929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 30502330 - 30502399
Alignment:
Q  112 atgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||| |||| |  ||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 30502399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 30542673 - 30542742
Alignment:
Q  112 atgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||| |||| |  ||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 30542742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 11686024 - 11685949
Alignment:
Q  153 ggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||||||||||||||| ||||  ||||||| |||||| ||||||||||||  || ||| |||||||||    
T  11686024 ggacacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaattatgcgactttctcaaattat 11685949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 17123165 - 17123097
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccgtgtcggacacgtgtcgtgtccgacaccgaca 179  Q
    ||||||||||  |||||  | |||||||||||||||||||||||||| || |||||||| |||||||||    
T  17123165 tatgaagcacggacactcctcggattaggcgtgtcccgtgtcggacatgtttcgtgtccaacaccgaca 17123097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 3966632 - 3966513
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||  |||||  | ||||||| ||||||||  ||| |||||| ||| ||||||||||| |||||||  ||||||| |||||| ||||| ||||    
T  3966632 tatgaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaatt 3966533  T
Q  210 atatgattttatcaaattat 229  Q
     | ||||||| |||||||||    
T  3966532 gtgtgattttctcaaattat 3966513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 30098982 - 30099049
Alignment:
Q  114 gaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||| ||||||  |||||| ||||||||||| ||||| |||||||||||| ||||||||||||||    
T  30098982 gaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacac 30099049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 21576686 - 21576756
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||  |||||  | |||||||||||||||| ||||| |||||||||||||||||||| ||||||    
T  21576686 tatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacac 21576756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 30183675 - 30183597
Alignment:
Q  114 gaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacac 191  Q
    |||||||| |||||| | | |||||||||||||| ||||||||||||||||||||| || ||| ||||||  |||||||    
T  30183675 gaagcacagacacttctcgaattaggcgtgtcccagtgtcggacacgtgtcgtgtctgataccaacacgacaccgacac 30183597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 15382582 - 15382533
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  15382582 ggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacac 15382533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 21191018 - 21191067
Alignment:
Q  132 ggattaggcgtgtcccgt-gtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||    
T  21191018 ggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacac 21191067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 27932353 - 27932288
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacacc 175  Q
    |||||||||||||||||  | | ||||||||||||| | |||| ||||||||||||||||||||||    
T  27932353 tatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacacc 27932288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 39268560 - 39268609
Alignment:
Q  132 ggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  39268560 ggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacac 39268609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 5467984 - 5468027
Alignment:
Q  186 cgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||||||||| ||||| |||||| |||||||||||||||||    
T  5467984 cgacacctataattacactgaattatgtgattttatcaaattat 5468027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 111
Target Start/End: Original strand, 17088365 - 17088404
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtgtt 111  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  17088365 ccgacaccgggacacgcctaatccgaggagtgtccgtgtt 17088404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 18592200 - 18592101
Alignment:
Q  113 tgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattat 211  Q
    ||||||||  ||||| || | ||||| ||||||||| |||| ||||||||| |||||||||||||||||||  ||| ||| |||||| ||| | ||||||    
T  18592200 tgaagcacggacactcatcgaattagccgtgtcccgatgtcagacacgtgttgtgtccgacaccgacacgacaccggcacatataattacattgaattat 18592101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 31084425 - 31084382
Alignment:
Q  132 ggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacac 174  Q
    ||||||||| |||||| |||||||||||||||||||||||||||    
T  31084425 ggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacac 31084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 36577616 - 36577657
Alignment:
Q  114 gaagcacaaacacttattggattaggcgtgtcccgtgtcgga 155  Q
    |||||||| |||||| ||||||||||||| ||||||||||||    
T  36577616 gaagcacagacacttcttggattaggcgtatcccgtgtcgga 36577657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 43564955 - 43564992
Alignment:
Q  72 ccgacaccgggacacgcctaatccaagaagtgtccgtg 109  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  43564955 ccgacgccgggacacgcctaatccgagaagtgtccgtg 43564992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 10022678 - 10022642
Alignment:
Q  193 tataatcacactaaattatatgattttatcaaattat 229  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  10022678 tataattacactgaattatatgattttatcaaattat 10022642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 12927700 - 12927664
Alignment:
Q  193 tataatcacactaaattatatgattttatcaaattat 229  Q
    |||||| |||||||||||||||||||| |||||||||    
T  12927700 tataattacactaaattatatgattttctcaaattat 12927664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 17088388 - 17088305
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgatttt 219  Q
    ||||||||||||||||| ||||||||||||| |     ||||||||||||||    ||||| | ||||||||||||||||| |||||||    
T  17088388 ggattaggcgtgtcccggtgtcggacacgtgac-----cgacaccgacacgacagtgacacttgtaatcacactaaattatgtgatttt 17088305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 23012413 - 23012457
Alignment:
Q  185 ccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||| |||||| ||| |||||||||||||||| |||||||||    
T  23012413 ccgacacatataattacattaaattatatgattttctcaaattat 23012457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 23221037 - 23220993
Alignment:
Q  185 ccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    ||||||| ||| || |||||||||||| |||||||||||||||||    
T  23221037 ccgacacatatgataacactaaattatgtgattttatcaaattat 23220993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 26609443 - 26609363
Alignment:
Q  149 tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||| |||||||||| | ||| ||||||||  |||||||  ||| |  |||||||| || |||||||||||||||||    
T  26609443 tgtcggacgcgtgtcgtgttcaacagcgacacgataccgacacaaatagttgcactaaatcatgtgattttatcaaattat 26609363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 28588679 - 28588723
Alignment:
Q  185 ccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||||||||| ||||| |||||| ||||||| |||||||||    
T  28588679 ccgacacctataattacactgaattatgtgattttctcaaattat 28588723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 23640 - 23531
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    |||||||||||||||||| | |||||| ||||||||| || |||||||| | |||||||||||||||| ||||  | ||||| |||||| ||||| ||||    
T  23640 tatgaagcacaaacacttctgggattatgcgtgtcccagtctcggacacatatcgtgtccgacaccgaaacgacactgacacttataattacactgaatt 23541  T
Q  210 atatgatttt 219  Q
    || |||||||    
T  23540 atgtgatttt 23531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 44455 - 44572
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaatt 209  Q
    ||||||||||| |||||| |  |||||  | |||||| ||||||||||||||| |||||| ||||||||||||  ||||||| |||||| ||||| ||||    
T  44455 tatgaagcacagacacttctcagattaaccatgtcccagtgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaatt 44554  T
Q  210 atatgattttatcaaatt 227  Q
    || ||||||| |||||||    
T  44555 atgtgattttctcaaatt 44572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 70394 - 70326
Alignment:
Q  113 tgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||| |||||| || ||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacac 70326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 3800 - 3898
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||||||||| || ||||||||| ||||||||||||||||| ||||||  | ||||| | |||| ||||| |||||| ||||||| | |||||||    
T  3800 ggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgatttttttaaattat 3898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 24154 - 24081
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccgtgtcgg--acacgtgtcgtgtccgacaccgacacga 182  Q
    ||||||||||  ||||| || ||||||||||||||| |||||||  |||||||| |||||||||||||||||||    
T  24154 tatgaagcacggacactcatcggattaggcgtgtccagtgtcggacacacgtgttgtgtccgacaccgacacga 24081  T

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Target: scaffold0652 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 401 - 473
Alignment:
Q  109 gttatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||||  |||||  | |||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  401 gttatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 473  T

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Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 8894 - 8846
Alignment:
Q  133 gattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  8894 gattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 8846  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 71854 - 71782
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacga 182  Q
    ||||||||||  |||||  | ||||||| ||||||||| |||||||||||||| |||||||||||||||||||    
T  71854 tatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacga 71782  T

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Target: scaffold0512 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 4977 - 5047
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||| |||||  | ||||||||| |||| |  ||||||||||||||||||||||||||||||||    
T  4977 tatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacac 5047  T

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Target: scaffold0380 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 8719 - 8645
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagt 184  Q
    ||||||||||  |||||  ||||||||||||| |||| |||||||||||||||||||| | |||| |||||||||    
T  8719 tatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgttcaacacagacacgagt 8645  T

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Target: scaffold0008 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 263347 - 263421
Alignment:
Q  155 acacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||||||||||||| |||||||||||||  | ||||| |||||| ||||| |||||| || |||| |||||||||    
T  263347 acacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattat 263421  T

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Target: scaffold0361 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 14645 - 14580
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacacc 175  Q
    ||||||||||  |||||  || ||||||||||||| || |||||||||||||||||||||||||||    
T  14645 tatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc 14580  T

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Target: scaffold0039 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 228
Target Start/End: Original strand, 84924 - 85021
Alignment:
Q  132 ggattaggcgtgtcccgt-gtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaatta 228  Q
    ||||||||||||||| || ||||||||||||| |||| ||||| ||||| ||  ||||||  |||||| ||||  |||||||||||||| | ||||||    
T  84924 ggattaggcgtgtcctgttgtcggacacgtgttgtgttcgacatcgacatgacaccgacatatataattacacataattatatgattttcttaaatta 85021  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 68226 - 68291
Alignment:
Q  164 gtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 229  Q
    |||| ||||||||| ||||  | |||||||||||| | |||||||||||||||||| |||||||||    
T  68226 gtgttcgacaccgatacgacactgacacctataattatactaaattatatgattttctcaaattat 68291  T

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Target: scaffold0086 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 3036 - 2948
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgatttt 219  Q
    ||||||||||||| ||| ||||| |||||||||||||| || ||||||||||  | || || | |||| |||||||||||| |||||||    
T  3036 ggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaattatgtgatttt 2948  T

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Target: scaffold0623 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 5945 - 6020
Alignment:
Q  130 ttggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacact 204  Q
    |||||| ||||||||| | ||||| |||||||||||||| ||||||||| ||||  ||||||| |||||| |||||    
T  5945 ttggataaggcgtgtctctgtgtcagacacgtgtcgtgttcgacaccgatacgacaccgacacatataattacact 6020  T

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Target: scaffold0083 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 45490 - 45541
Alignment:
Q  130 ttggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    ||||||||||| |||| || |||| |||||||||||||||||||||||||||    
T  45490 ttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacac 45541  T

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Target: scaffold0450 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 8588 - 8637
Alignment:
Q  134 attaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacga 182  Q
    ||||||||||| || ||||||||||||| |||||||||| ||||||||||    
T  8588 attaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacga 8637  T

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Target: scaffold0316 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 16263 - 16182
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacacgagtccgacac 191  Q
    ||||||||||||| ||| || ||||||| |||||||| |||| ||| |||| | |||||||||||| ||||||  |||||||    
T  16263 tatgaagcacaaatactaatcggattagacgtgtcccggtgttggatacgtattgtgtccgacaccaacacgacaccgacac 16182  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 13523 - 13454
Alignment:
Q  112 atgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||  |||||  |||||||||| ||||||  ||||| ||| |||||||||||||||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 13454  T

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Target: scaffold0152 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 21804 - 21873
Alignment:
Q  112 atgaagcacaaacacttattggattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||  |||||  |||||||||| ||||||  ||||| ||| |||||||||||||||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 21873  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 90961 - 90892
Alignment:
Q  111 tatgaagcacaaacacttattggattaggcgtg-tcccgtgtcggacacgtgtcgtgtccgacaccgaca 179  Q
    ||||||||||| ||||| ||||||||||||||| |   ||||||||||||||| ||||| |||| |||||    
T  90961 tatgaagcacatacactcattggattaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgaca 90892  T

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Target: scaffold0697 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 1724 - 1692
Alignment:
Q  148 gtgtcggacacgtgtcgtgtccgacaccgacac 180  Q
    |||||||||| ||||||||||||||||||||||    
T  1724 gtgtcggacatgtgtcgtgtccgacaccgacac 1692  T

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Target: scaffold0154 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 13521 - 13461
Alignment:
Q  132 ggattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccgacacgagtccgacac 191  Q
    |||||||| || ||||| ||||| | ||||||||||||||||||||||||||  |||||||    
T  13521 ggattaggtgtatcccgatgtcgtatacgtgtcgtgtccgacaccgacacgaccccgacac 13461  T

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