View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17457_low_2 (Length: 404)

Name: NF17457_low_2
Description: NF17457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17457_low_2
NF17457_low_2
[»] chr8 (23 HSPs)
chr8 (1-398)||(31309229-31309626)
chr8 (1-44)||(18473981-18474024)
chr8 (1-44)||(39953273-39953316)
chr8 (1-46)||(16917410-16917455)
chr8 (4-44)||(1335556-1335596)
chr8 (1-44)||(1928596-1928639)
chr8 (1-44)||(11523732-11523775)
chr8 (1-44)||(14742091-14742134)
chr8 (1-44)||(18741862-18741905)
chr8 (1-44)||(18746826-18746869)
chr8 (1-44)||(25473412-25473455)
chr8 (1-44)||(30812825-30812868)
chr8 (1-44)||(32569719-32569762)
chr8 (1-44)||(36545379-36545422)
chr8 (1-44)||(44529455-44529498)
chr8 (1-44)||(45419465-45419508)
chr8 (3-44)||(490565-490606)
chr8 (8-45)||(36394964-36395001)
chr8 (1-37)||(1064957-1064993)
chr8 (8-44)||(2796783-2796819)
chr8 (8-44)||(12491154-12491190)
chr8 (8-44)||(36565257-36565293)
chr8 (3-35)||(42584597-42584629)
[»] chr5 (33 HSPs)
chr5 (111-354)||(9434271-9434514)
chr5 (1-44)||(18855837-18855880)
chr5 (1-44)||(28411906-28411949)
chr5 (1-44)||(28976868-28976911)
chr5 (1-44)||(408503-408546)
chr5 (1-44)||(2713166-2713209)
chr5 (1-44)||(2915505-2915548)
chr5 (1-44)||(3302074-3302117)
chr5 (1-44)||(3442880-3442923)
chr5 (1-44)||(4496614-4496657)
chr5 (1-44)||(4653482-4653525)
chr5 (1-44)||(5558371-5558414)
chr5 (1-44)||(7678707-7678750)
chr5 (1-44)||(9121087-9121130)
chr5 (1-44)||(12492393-12492436)
chr5 (1-44)||(14668001-14668044)
chr5 (1-44)||(16347389-16347432)
chr5 (1-44)||(25938199-25938242)
chr5 (1-44)||(29816612-29816655)
chr5 (1-44)||(30213805-30213848)
chr5 (1-44)||(38685197-38685240)
chr5 (1-43)||(1287588-1287630)
chr5 (3-44)||(2075484-2075525)
chr5 (3-44)||(13561397-13561438)
chr5 (3-40)||(15252755-15252792)
chr5 (3-44)||(20457003-20457044)
chr5 (3-44)||(39040986-39041027)
chr5 (1-37)||(218061-218097)
chr5 (8-44)||(1275494-1275530)
chr5 (8-44)||(27386570-27386606)
chr5 (8-44)||(32442141-32442177)
chr5 (5-44)||(37065706-37065746)
chr5 (4-44)||(41894303-41894343)
[»] chr4 (39 HSPs)
chr4 (4-44)||(8598953-8598993)
chr4 (1-44)||(1211401-1211444)
chr4 (1-44)||(35690501-35690544)
chr4 (1-37)||(49686930-49686966)
chr4 (1-44)||(436459-436502)
chr4 (1-44)||(7544540-7544583)
chr4 (1-44)||(7947167-7947210)
chr4 (1-44)||(21528518-21528561)
chr4 (1-44)||(27450189-27450232)
chr4 (1-36)||(28236420-28236455)
chr4 (1-44)||(30634115-30634158)
chr4 (1-44)||(31959823-31959866)
chr4 (1-44)||(31961275-31961318)
chr4 (1-44)||(39708663-39708706)
chr4 (1-44)||(42285712-42285755)
chr4 (1-44)||(44719370-44719413)
chr4 (1-44)||(45209214-45209257)
chr4 (1-44)||(50238624-50238667)
chr4 (1-44)||(50238710-50238753)
chr4 (1-44)||(50862861-50862904)
chr4 (1-44)||(52569524-52569567)
chr4 (1-44)||(55007976-55008019)
chr4 (1-44)||(56375520-56375563)
chr4 (8-41)||(45184149-45184182)
chr4 (1-42)||(46153940-46153981)
chr4 (8-44)||(4441083-4441119)
chr4 (4-44)||(8598908-8598948)
chr4 (8-44)||(10209264-10209300)
chr4 (8-44)||(13262442-13262478)
chr4 (8-44)||(15661888-15661924)
chr4 (4-44)||(18966835-18966875)
chr4 (8-44)||(19969411-19969447)
chr4 (1-37)||(20047671-20047707)
chr4 (4-44)||(20654868-20654908)
chr4 (8-44)||(21359241-21359277)
chr4 (1-37)||(39100545-39100581)
chr4 (1-37)||(48622552-48622588)
chr4 (8-44)||(49939750-49939786)
chr4 (1-37)||(56130407-56130443)
[»] chr7 (39 HSPs)
chr7 (1-44)||(6682583-6682626)
chr7 (1-44)||(34745977-34746020)
chr7 (8-44)||(17759503-17759539)
chr7 (1-44)||(2885731-2885774)
chr7 (1-44)||(4604777-4604820)
chr7 (1-44)||(5336148-5336190)
chr7 (1-44)||(6263489-6263532)
chr7 (1-44)||(6375098-6375141)
chr7 (1-44)||(11594190-11594233)
chr7 (1-44)||(12841284-12841327)
chr7 (1-44)||(12966246-12966289)
chr7 (1-40)||(14593986-14594025)
chr7 (1-40)||(16013509-16013548)
chr7 (9-44)||(19119441-19119476)
chr7 (1-44)||(27649010-27649053)
chr7 (1-44)||(28208337-28208380)
chr7 (1-44)||(28708611-28708654)
chr7 (1-44)||(29650614-29650657)
chr7 (1-44)||(31005435-31005478)
chr7 (1-44)||(31682611-31682654)
chr7 (1-44)||(31869111-31869154)
chr7 (1-44)||(35906210-35906253)
chr7 (1-44)||(37618175-37618218)
chr7 (1-44)||(39738454-39738497)
chr7 (1-44)||(39906381-39906424)
chr7 (1-44)||(40979937-40979980)
chr7 (9-44)||(47155189-47155224)
chr7 (1-44)||(48515505-48515548)
chr7 (1-39)||(21244292-21244330)
chr7 (3-44)||(7273330-7273371)
chr7 (1-42)||(41483719-41483760)
chr7 (8-44)||(28627949-28627985)
chr7 (8-44)||(36652222-36652258)
chr7 (8-44)||(42187671-42187707)
chr7 (8-44)||(42969928-42969964)
chr7 (1-37)||(43491545-43491581)
chr7 (1-37)||(44855183-44855219)
chr7 (8-44)||(45836498-45836534)
chr7 (8-44)||(48735917-48735953)
[»] chr6 (8 HSPs)
chr6 (1-44)||(3206468-3206511)
chr6 (1-44)||(34514-34557)
chr6 (1-44)||(608391-608434)
chr6 (1-44)||(9707000-9707043)
chr6 (1-44)||(12890805-12890848)
chr6 (1-44)||(28085606-28085649)
chr6 (1-44)||(34934839-34934882)
chr6 (1-37)||(33730202-33730238)
[»] chr2 (28 HSPs)
chr2 (1-44)||(12489811-12489854)
chr2 (3-44)||(35704227-35704268)
chr2 (8-44)||(29968627-29968663)
chr2 (1-44)||(227419-227462)
chr2 (1-44)||(624695-624738)
chr2 (1-44)||(3635332-3635375)
chr2 (1-44)||(4807825-4807868)
chr2 (1-44)||(9531609-9531652)
chr2 (1-44)||(12474936-12474979)
chr2 (1-44)||(12520071-12520114)
chr2 (1-44)||(15015175-15015218)
chr2 (1-44)||(17429280-17429323)
chr2 (1-44)||(17670698-17670741)
chr2 (1-44)||(25834908-25834951)
chr2 (1-44)||(26670998-26671041)
chr2 (1-44)||(28508908-28508951)
chr2 (1-44)||(30306262-30306305)
chr2 (1-44)||(38328379-38328422)
chr2 (1-44)||(41763052-41763095)
chr2 (1-44)||(42543465-42543508)
chr2 (1-44)||(43573139-43573182)
chr2 (1-40)||(44437730-44437769)
chr2 (1-34)||(11414571-11414604)
chr2 (8-44)||(8181010-8181046)
chr2 (1-37)||(8560815-8560851)
chr2 (8-44)||(16521023-16521059)
chr2 (1-37)||(35643185-35643221)
chr2 (1-37)||(38452695-38452731)
[»] chr1 (34 HSPs)
chr1 (1-44)||(4029352-4029395)
chr1 (1-44)||(26299298-26299341)
chr1 (1-44)||(28090703-28090746)
chr1 (1-44)||(28533697-28533740)
chr1 (1-44)||(51440774-51440817)
chr1 (4-44)||(48861387-48861427)
chr1 (1-44)||(990475-990518)
chr1 (1-44)||(1210975-1211018)
chr1 (1-44)||(22175375-22175418)
chr1 (1-44)||(25979240-25979283)
chr1 (1-44)||(29577482-29577525)
chr1 (1-44)||(30202139-30202182)
chr1 (1-44)||(37462885-37462928)
chr1 (9-44)||(39140745-39140780)
chr1 (1-44)||(41560459-41560502)
chr1 (1-44)||(43481807-43481850)
chr1 (1-44)||(44941785-44941828)
chr1 (1-44)||(49347402-49347445)
chr1 (1-44)||(52532625-52532668)
chr1 (1-44)||(52561598-52561641)
chr1 (1-44)||(52921310-52921353)
chr1 (1-38)||(4707230-4707267)
chr1 (3-44)||(19936690-19936731)
chr1 (7-44)||(29808086-29808123)
chr1 (1-37)||(4380197-4380232)
chr1 (8-44)||(4590548-4590584)
chr1 (1-37)||(8796446-8796482)
chr1 (8-44)||(10272486-10272522)
chr1 (8-44)||(32404542-32404578)
chr1 (1-37)||(38758029-38758065)
chr1 (1-37)||(38807680-38807716)
chr1 (8-44)||(43240395-43240431)
chr1 (9-45)||(43898438-43898474)
chr1 (8-44)||(46423232-46423268)
[»] chr3 (19 HSPs)
chr3 (1-38)||(14415269-14415306)
chr3 (1-44)||(311318-311361)
chr3 (1-44)||(3987564-3987607)
chr3 (1-44)||(5169062-5169105)
chr3 (1-44)||(12096714-12096757)
chr3 (1-44)||(31454234-31454277)
chr3 (1-44)||(31566170-31566213)
chr3 (1-44)||(38060944-38060987)
chr3 (1-44)||(41529991-41530034)
chr3 (1-44)||(47233605-47233648)
chr3 (1-44)||(48508465-48508508)
chr3 (1-44)||(52139030-52139073)
chr3 (1-44)||(52927857-52927900)
chr3 (2-44)||(24778619-24778661)
chr3 (1-39)||(35032775-35032813)
chr3 (8-44)||(27893319-27893355)
chr3 (8-44)||(31146929-31146965)
chr3 (4-44)||(37351637-37351677)
chr3 (1-37)||(39512780-39512816)
[»] scaffold0491 (1 HSPs)
scaffold0491 (1-44)||(3667-3710)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-44)||(28898-28941)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-44)||(99295-99338)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-44)||(31698-31741)
[»] scaffold1318 (1 HSPs)
scaffold1318 (3-44)||(561-602)


Alignment Details
Target: chr8 (Bit Score: 390; Significance: 0; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 1 - 398
Target Start/End: Complemental strand, 31309626 - 31309229
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaaaggtctatcaaaaaccatgtatttctcctcaatcaatataaaacaaagaaatgata 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31309626 accaagtcttatcccactaagtggtgtcggctacatgaatcaaaaggtctatcaaaaaccatgtatttctcctcaatcaatataaaacaaagaaatgata 31309527  T
Q  101 ggaattatttataccttaagactttcgacgacaccgggaacaacctcatgttcaagaccagcatactccccttcagtattctccctaataactacaatat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31309526 ggaattatttataccttaagactttcgacgacaccgggaacaacctcatgttcaagaccagcatactccccttcagtattctccctaataactacaatat 31309427  T
Q  201 caacgttatcatgtcgtgtaggtaacccaggaagattaaaacaattaacaagcgaagcataaagatcaagctctttcctcaactgaacattaagcgaact 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31309426 caacgttatcatgtcgtgtaggtaacccaggaagattaaaacaattaacaagagaagcataaagatcaagctctttcctcaactgaacattaagcgaact 31309327  T
Q  301 aacaccaccacccataggagtaaccaatccacctttaagacaaaccttattcttacggatcgattcaagaacttccgtaggtacagctttcatctcac 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31309326 aacaccaccacccataggagtaaccaatccacctttaagacaaaccttattcttacggatcgattcaagaacttccgtaggtacagctttcatgtcac 31309229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18473981 - 18474024
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18473981 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 18474024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39953273 - 39953316
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  39953273 accaagtcttatcccactaagtggggtcggctacatgaatcaaa 39953316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16917455 - 16917410
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaaag 46  Q
    |||||||||||||||||||||||| | |||||||||| ||||||||    
T  16917455 accaagtcttatcccactaagtggggacggctacatggatcaaaag 16917410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 1335596 - 1335556
Alignment:
Q  4 aagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  1335596 aagtcctatcccactaagtggggtcggctacatgaatcaaa 1335556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1928596 - 1928639
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  1928596 accaagccttatcccactaagtggggtcggctacatggatcaaa 1928639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11523732 - 11523775
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  11523732 accaagccttatcccactaagtggggtcggctacatggatcaaa 11523775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14742091 - 14742134
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  14742091 accaagccttatcccactaagtggggtcggctacatggatcaaa 14742134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18741905 - 18741862
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| ||||||||| || ||||||    
T  18741905 accaagtcttatcccactaagtggggtcggctacttggatcaaa 18741862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18746869 - 18746826
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| ||||||||| || ||||||    
T  18746869 accaagtcttatcccactaagtggggtcggctacttggatcaaa 18746826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25473412 - 25473455
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  25473412 accaagccttatcccactaagtggggtcggctacatggatcaaa 25473455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30812825 - 30812868
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||    
T  30812825 accaagccttttcccactaagtggggtcggctacatgaatcaaa 30812868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 32569719 - 32569762
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||    
T  32569719 accaagtcttatcccactaaatggggtcggctacataaatcaaa 32569762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36545422 - 36545379
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  36545422 accaagccttatcccactaagtggggtcggctacatggatcaaa 36545379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44529498 - 44529455
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  44529498 accaagccttatcccactaagtggggtcggctacatggatcaaa 44529455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 45419508 - 45419465
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  45419508 accaagccttatcccactaagtggggtcggctacatggatcaaa 45419465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 490606 - 490565
Alignment:
Q  3 caagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||| ||||||||||||||||| |||||||||||| ||||||    
T  490606 caagccttatcccactaagtggggtcggctacatggatcaaa 490565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 36394964 - 36395001
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaaa 45  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  36394964 cttatcccactaagtggggtcggctacatggatcaaaa 36395001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1064993 - 1064957
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  1064993 accaagccttatcccactaagtggggtcggctacatg 1064957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 2796819 - 2796783
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  2796819 cttatcccactaagtggggtcgtctacatgaatcaaa 2796783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 12491154 - 12491190
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  12491154 cttatcccactaagtggggtcggctacatggatcaaa 12491190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 36565257 - 36565293
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  36565257 cttatcccactaagtggggtcggctacatggatcaaa 36565293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 42584629 - 42584597
Alignment:
Q  3 caagtcttatcccactaagtggtgtcggctaca 35  Q
    |||||||||||||||||||||| ||||||||||    
T  42584629 caagtcttatcccactaagtggggtcggctaca 42584597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 5e-66; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 111 - 354
Target Start/End: Original strand, 9434271 - 9434514
Alignment:
Q  111 ataccttaagactttcgacgacaccgggaacaacctcatgttcaagaccagcatactccccttcagtattctccctaataactacaatatcaacgttatc 210  Q
    ||||||| ||||| || ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| |||||    
T  9434271 ataccttgagactctcaacgacgccgggaacaacctcatgttcaagaccggcatattccccttcagtattctccctaataacaacaatatcaacattatc 9434370  T
Q  211 atgtcgtgtaggtaacccaggaagattaaaacaattaacaagcgaagcataaagatcaagctctttcctcaactgaacattaagcgaactaacaccacca 310  Q
    ||| |  ||||  || ||    |||||||||||||| |||||||||||||||||||||||||| ||||||| ||| | ||||||||||||||||||||||    
T  9434371 atgcctagtagtcaatccttccagattaaaacaattgacaagcgaagcataaagatcaagctccttcctcagctgcaaattaagcgaactaacaccacca 9434470  T
Q  311 cccataggagtaaccaatccacctttaagacaaaccttattctt 354  Q
    ||||| |||||  | ||||||||||| | |||||||||||||||    
T  9434471 cccatcggagtcgctaatccacctttcaaacaaaccttattctt 9434514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18855880 - 18855837
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  18855880 accaagtcttatcccactaagtggggtcggctacatggatcaaa 18855837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28411949 - 28411906
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  28411949 accaagccttatcccactaagtggggtcggctacatgaatcaaa 28411906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28976868 - 28976911
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  28976868 accaagccttatcccactaagtggggtcggctacatgaatcaaa 28976911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 408503 - 408546
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  408503 accaagccttatcccactaagtggggtcggctacatggatcaaa 408546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2713209 - 2713166
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| |||||||||||||||||  ||||||||||||||||||    
T  2713209 accaagccttatcccactaagtgggctcggctacatgaatcaaa 2713166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2915505 - 2915548
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  2915505 accaagccttatcccactaagtggggtcggctacatggatcaaa 2915548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3302117 - 3302074
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  3302117 accaagccttatcccactaagtggggtcggctacatggatcaaa 3302074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3442880 - 3442923
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||| ||||||||||| |||||||||||||||||||    
T  3442880 accaagccttatgccactaagtggggtcggctacatgaatcaaa 3442923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4496657 - 4496614
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  4496657 accaagccttatcccactaagtggggtcggctacatggatcaaa 4496614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4653525 - 4653482
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||    
T  4653525 accaagtcttatctcactaagtggggtcggatacatgaatcaaa 4653482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5558414 - 5558371
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  5558414 accaagccttatcccactaagtggggtcggctacatggatcaaa 5558371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7678750 - 7678707
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||| |||||||||||||||| |||||||||||| ||||||    
T  7678750 accaagttttatcccactaagtggggtcggctacatggatcaaa 7678707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9121087 - 9121130
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||  |||||||||||||||||||    
T  9121087 accaagccttatcccactaagtgaggtcggctacatgaatcaaa 9121130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12492393 - 12492436
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  12492393 accaagccttatcccactaagtggggtcggctacatgcatcaaa 12492436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14668044 - 14668001
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| ||||| |||||| ||||||    
T  14668044 accaagtcttatcccactaagtggggtcggttacatggatcaaa 14668001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16347389 - 16347432
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  16347389 accaagtcttatcccactaagtagggtcggctacatggatcaaa 16347432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25938242 - 25938199
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||    
T  25938242 accaagtcttatctcactatgtggagtcggctacatgaatcaaa 25938199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29816655 - 29816612
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  29816655 accaagccttatcccactaagtggggtcggctacatggatcaaa 29816612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30213848 - 30213805
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  30213848 accaagccttatcccactaagtggggtcggctacatggatcaaa 30213805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38685240 - 38685197
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  38685240 accaagccttatcccactaagtggggtcggctacatggatcaaa 38685197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1287588 - 1287630
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaa 43  Q
    |||||| ||||||||||||||||| |||||||||||| |||||    
T  1287588 accaagccttatcccactaagtggggtcggctacatggatcaa 1287630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 2075484 - 2075525
Alignment:
Q  3 caagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||| ||||||||||||||||| || ||||||||||||||||    
T  2075484 caagccttatcccactaagtggggttggctacatgaatcaaa 2075525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 13561397 - 13561438
Alignment:
Q  3 caagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||| ||||||||||||||||| |||||||||||| ||||||    
T  13561397 caagccttatcccactaagtggggtcggctacatggatcaaa 13561438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 15252755 - 15252792
Alignment:
Q  3 caagtcttatcccactaagtggtgtcggctacatgaat 40  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  15252755 caagccttatcccactaagtggggtcggctacatgaat 15252792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 20457044 - 20457003
Alignment:
Q  3 caagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||| ||||||||||||||||| |||||||||||| ||||||    
T  20457044 caagccttatcccactaagtggggtcggctacatggatcaaa 20457003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 39041027 - 39040986
Alignment:
Q  3 caagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||| ||||||| |||||||||||| ||||||    
T  39041027 caagtcttatcccattaagtggggtcggctacatggatcaaa 39040986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 218061 - 218097
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  218061 accaagtcttatcccactaggtggggtcggctacatg 218097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 1275530 - 1275494
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  1275530 cttatcccactaagtggggtcggctacatggatcaaa 1275494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 27386606 - 27386570
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  27386606 cttatcccactaagtggggtcggctacatggatcaaa 27386570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 32442141 - 32442177
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  32442141 cttatcccactaagtggagtcggctacatggatcaaa 32442177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 37065746 - 37065706
Alignment:
Q  5 agtcttatcccactaag-tggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  37065746 agtcttatcccactaagctggggtcggctacatgaatcaaa 37065706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 41894343 - 41894303
Alignment:
Q  4 aagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||||||| || ||||||||| ||||||    
T  41894343 aagtcttatcccactaagtggggttggctacatggatcaaa 41894303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000009; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 8598953 - 8598993
Alignment:
Q  4 aagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  8598953 aagtcttatcccactaagtggcgtcggctacatgaatcaaa 8598993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1211401 - 1211444
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  1211401 accaagtcttatcccattaagtggggtcggctacatgaatcaaa 1211444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35690544 - 35690501
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  35690544 accaagtcttatcccactaagtggggtcggctacatggatcaaa 35690501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 49686966 - 49686930
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  49686966 accaagtcttatcccactaagtggggtcggctacatg 49686930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 436502 - 436459
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  436502 accaagccttatcccactaagtggggtcggctacatggatcaaa 436459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7544540 - 7544583
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  7544540 accaaggcttatcccactaagtggggtcggctacatggatcaaa 7544583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7947210 - 7947167
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  7947210 accaagccttatcccactaagtggggtcggctacatggatcaaa 7947167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21528561 - 21528518
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  21528561 accaagccttatcccactaagtggggtcggctacatggatcaaa 21528518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27450189 - 27450232
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  27450189 accaagccttatcccactaagtggggtcggctacatggatcaaa 27450232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 28236455 - 28236420
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacat 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  28236455 accaagtcttatcccactaagtggggtcggctacat 28236420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30634115 - 30634158
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  30634115 accaagccttatcccactaagtggggtcggctacatggatcaaa 30634158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31959823 - 31959866
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  31959823 accaagccttatcccactaagtggggtcggctacatggatcaaa 31959866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31961275 - 31961318
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||  |||||||||||||||||||    
T  31961275 accaagccttatcccactaagtgaggtcggctacatgaatcaaa 31961318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39708706 - 39708663
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||    
T  39708706 accaagtcttatcccactaagtggggtcgactacatggatcaaa 39708663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42285712 - 42285755
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||| ||||||||| || ||||||||||||||||    
T  42285712 accaagtcttatccaactaagtggggttggctacatgaatcaaa 42285755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44719370 - 44719413
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  44719370 accaagtcttatcccactaagtagggtcggctacatggatcaaa 44719413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45209214 - 45209257
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  45209214 accaagccttatcccactaagtggggtcggctacatggatcaaa 45209257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 50238624 - 50238667
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  50238624 accaagccttatcccactaagtggggtcggctacatggatcaaa 50238667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 50238710 - 50238753
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  50238710 accaagccttatcccactaagtggggtcggctacatggatcaaa 50238753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 50862904 - 50862861
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  50862904 accaagccttatcccactaagtggggtcggctacatggatcaaa 50862861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 52569524 - 52569567
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  52569524 accaagccttatcccactaagtggggtcggctacatggatcaaa 52569567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 55008019 - 55007976
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  55008019 accaagccttatcccactaagtggggtcggctacatggatcaaa 55007976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 56375563 - 56375520
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||  |||||||||||| ||||||    
T  56375563 accaagtcttatcccactaagtgaggtcggctacatggatcaaa 56375520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 45184149 - 45184182
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatc 41  Q
    ||||||||||||||||| ||||||||||||||||    
T  45184149 cttatcccactaagtggggtcggctacatgaatc 45184182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 46153981 - 46153940
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatca 42  Q
    |||||| ||||||||||||||||| |||||||||||| ||||    
T  46153981 accaagccttatcccactaagtggggtcggctacatggatca 46153940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 4441119 - 4441083
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  4441119 cttatcccactaagtggggtcggctacatggatcaaa 4441083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 8598908 - 8598948
Alignment:
Q  4 aagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||| |||||||  ||||||||||||||||||    
T  8598908 aagtcttatcccattaagtgggatcggctacatgaatcaaa 8598948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 10209300 - 10209264
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  10209300 cttatcccactaagtggggtcggctacttgaatcaaa 10209264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 13262478 - 13262442
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| |||||||||| |||||||||||||||||||    
T  13262478 cttatcacactaagtggagtcggctacatgaatcaaa 13262442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 15661888 - 15661924
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  15661888 cttatcccactaagtggggtcggctacatggatcaaa 15661924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 18966875 - 18966835
Alignment:
Q  4 aagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||| ||| |||||| |||||||||||||||||||    
T  18966875 aagtcttatcgcacaaagtggggtcggctacatgaatcaaa 18966835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 19969447 - 19969411
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  19969447 cttatcccactaagtggggtcggctacatggatcaaa 19969411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 20047707 - 20047671
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||||||||||||||||||||| | ||||||||||    
T  20047707 accaagtcttatcccactaagtggggccggctacatg 20047671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 20654908 - 20654868
Alignment:
Q  4 aagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||| |||||||||| ||||| |||||||||||||    
T  20654908 aagtcttatctcactaagtggggtcggatacatgaatcaaa 20654868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 21359241 - 21359277
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  21359241 cttatcccactaagtggggtcggctgcatgaatcaaa 21359277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 39100545 - 39100581
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  39100545 accaagccttatcccactaagtggggtcggctacatg 39100581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 48622552 - 48622588
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  48622552 accaagccttatcccactaagtggggtcggctacatg 48622588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 49939750 - 49939786
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  49939750 cttatcccactaagtggggtcggctacatggatcaaa 49939786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 56130443 - 56130407
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  56130443 accaagccttatcccactaagtggggtcggctacatg 56130407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6682626 - 6682583
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  6682626 accaagccttatcccactaagtggggtcggctacatgaatcaaa 6682583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34746020 - 34745977
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  34746020 accaagccttatcccactaagtggggtcggctacatgaatcaaa 34745977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 17759539 - 17759503
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||||||||||    
T  17759539 cttatcccactaagtggggtcggctacatgaatcaaa 17759503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2885731 - 2885774
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  2885731 accaagccttatcccactaagtggggtcggctacatggatcaaa 2885774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4604820 - 4604777
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| || ||||||||| ||||||    
T  4604820 accaagtcttatcccactaagtggggttggctacatggatcaaa 4604777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5336190 - 5336148
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  5336190 accaagtcttatcccactatgtgg-gtcggctacatgaatcaaa 5336148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6263532 - 6263489
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  6263532 accaagccttatcccactaagtggggtcggctacatggatcaaa 6263489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6375141 - 6375098
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  6375141 accaagccttatcccactaagtggggtcggctacatggatcaaa 6375098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11594233 - 11594190
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  11594233 accaagccttatcccactaagtggggtcggctacatggatcaaa 11594190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12841284 - 12841327
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  12841284 accaagccttatcccactaagtggggtcggctacatggatcaaa 12841327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12966289 - 12966246
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| |||||||||||||||||  ||||||||||||||||||    
T  12966289 accaagccttatcccactaagtgggatcggctacatgaatcaaa 12966246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 14594025 - 14593986
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaat 40  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  14594025 accaagccttatcccactaagtggggtcggctacatgaat 14593986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 16013548 - 16013509
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaat 40  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  16013548 accaagccttatcccactaagtggggtcggctacatgaat 16013509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 19119441 - 19119476
Alignment:
Q  9 ttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  19119441 ttatcccactaagtggggtcggctacatgaatcaaa 19119476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27649053 - 27649010
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  27649053 accaagccttatcccactaagtggggtcggctacatggatcaaa 27649010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28208337 - 28208380
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  28208337 accaagccttatcccactaagtggggtcggctacatggatcaaa 28208380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28708654 - 28708611
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  28708654 accaagccttatcccactaagtggggtcggctacatggatcaaa 28708611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29650657 - 29650614
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  29650657 accaagccttatcccactaagtggggtcggctacatggatcaaa 29650614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31005478 - 31005435
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  31005478 accaagccttatcccactaagtggggtcggctacatggatcaaa 31005435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31682611 - 31682654
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  31682611 accaagccttatcccactaagtggggtcggctacatggatcaaa 31682654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31869111 - 31869154
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  31869111 accaagccttatcccactaagtggggtcggctacatggatcaaa 31869154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35906210 - 35906253
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  35906210 accaagccttatcccactaagtggggtcggctacatggatcaaa 35906253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37618218 - 37618175
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  37618218 accaagccttatcccactaagtggggtcggctacatggatcaaa 37618175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39738454 - 39738497
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| || ||||||||||||||||    
T  39738454 accaagccttatcccactaagtggggttggctacatgaatcaaa 39738497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39906381 - 39906424
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  39906381 accaagccttatcccactaagtggggtcggctacatggatcaaa 39906424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40979937 - 40979980
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  40979937 accaagccttatcccactaagtggggtcggctacatggatcaaa 40979980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 47155189 - 47155224
Alignment:
Q  9 ttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  47155189 ttatcccactaagtggggtcggctacatgaatcaaa 47155224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48515548 - 48515505
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| |||||||||| | ||||||    
T  48515548 accaagtcttatcccactaagtggggtcggctacacggatcaaa 48515505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21244292 - 21244330
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaa 39  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  21244292 accaagccttatcccactaagtggggtcggctacatgaa 21244330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 7273371 - 7273330
Alignment:
Q  3 caagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||| ||||||||||||||||| |||||||||||| ||||||    
T  7273371 caagccttatcccactaagtggggtcggctacatggatcaaa 7273330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41483760 - 41483719
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatca 42  Q
    ||||| |||||||||||||||||| |||||||||||| ||||    
T  41483760 accaaatcttatcccactaagtggggtcggctacatggatca 41483719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 28627949 - 28627985
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  28627949 cttatcccactaagtggagtcggctacatggatcaaa 28627985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 36652258 - 36652222
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  36652258 cttatcccactaagtggggtcggctacatggatcaaa 36652222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 42187707 - 42187671
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  42187707 cttatcccactaagtggggtcggctacatggatcaaa 42187671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 42969964 - 42969928
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  42969964 cttatcccactaagtggggtcggctacatggatcaaa 42969928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43491581 - 43491545
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  43491581 accaagccttatcccactaagtggggtcggctacatg 43491545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 44855183 - 44855219
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  44855183 accaagccttatcccactaagtggggtcggctacatg 44855219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 45836498 - 45836534
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  45836498 cttatcccactaagtggggtcggctacatggatcaaa 45836534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 48735917 - 48735953
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| || ||||||||||||||||    
T  48735917 cttatcccactaagtggggttggctacatgaatcaaa 48735953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3206468 - 3206511
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  3206468 accaagtcttatcccactaagtggggtcggctacatggatcaaa 3206511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34514 - 34557
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||    
T  34514 accaagtcttatcccactaagtggggtcagctacatggatcaaa 34557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 608434 - 608391
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  608434 accaagtcttatcccactaagtagggtcggctacatggatcaaa 608391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9707043 - 9707000
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  9707043 accaagccttatcccactaagtggggtcggctacatggatcaaa 9707000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12890848 - 12890805
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  12890848 accaagccttatcccactaagtggggtcggctacatggatcaaa 12890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28085649 - 28085606
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  28085649 accaagccttatcccactaagtggggtcggctacatggatcaaa 28085606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34934839 - 34934882
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  34934839 accaagccttatcccactaagtggggtcggctacatggatcaaa 34934882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33730238 - 33730202
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  33730238 accaagccttatcccactaagtggggtcggctacatg 33730202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12489811 - 12489854
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  12489811 accaagccttatcccactaagtggggtcggctacatgaatcaaa 12489854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 35704227 - 35704268
Alignment:
Q  3 caagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  35704227 caagtcttatcccactaaatgatgtcggctacatgaatcaaa 35704268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 29968627 - 29968663
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||||||||||    
T  29968627 cttatcccactaagtggagtcggctacatgaatcaaa 29968663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 227462 - 227419
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  227462 accaagccttatcccactaagtggggtcggctacatggatcaaa 227419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 624695 - 624738
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| |||||||||||||| || |||||||||||||||||||    
T  624695 accaagccttatcccactaagcggggtcggctacatgaatcaaa 624738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3635332 - 3635375
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  3635332 accaagccttatcccactaagtggggtcggctacatggatcaaa 3635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4807868 - 4807825
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  4807868 accaagccttatcccactaagtggggtcggctacatggatcaaa 4807825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9531609 - 9531652
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  9531609 accaagccttatcccactaagtggggtcggctacatggatcaaa 9531652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12474936 - 12474979
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  12474936 accaagccttatcccactaagtggggtcggctacatggatcaaa 12474979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12520071 - 12520114
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  12520071 accaagccttatcccactaagtggggtcggctacatggatcaaa 12520114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15015218 - 15015175
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||| | |||||||||||||||||||    
T  15015218 accaagccttatcccactaagttgcgtcggctacatgaatcaaa 15015175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17429323 - 17429280
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| |||||| |||||||||| |||||||||||||||||||    
T  17429323 accaagccttatctcactaagtggggtcggctacatgaatcaaa 17429280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17670741 - 17670698
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  17670741 accaagccttatcccactaagtggggtcggctacatggatcaaa 17670698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25834951 - 25834908
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  25834951 accaagccttatcccactaagtggggtcggctacatggatcaaa 25834908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26671041 - 26670998
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||  |||||||||||||| ||||||    
T  26671041 accaagtcttatcccactaagcagtgtcggctacatggatcaaa 26670998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28508951 - 28508908
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  28508951 accaagccttatcccactaagtggggtcggctacatggatcaaa 28508908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30306305 - 30306262
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  30306305 accaagccttatcccactaagtggggtcggctacatggatcaaa 30306262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38328379 - 38328422
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  38328379 accaagccttatcccactaagtggggtcggctacatggatcaaa 38328422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 41763052 - 41763095
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  41763052 accaagccttatcccactaagtggggtcggctacatggatcaaa 41763095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42543508 - 42543465
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| | |||||||||||||||||    
T  42543508 accaagccttatcccactaagtggggccggctacatgaatcaaa 42543465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43573139 - 43573182
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  43573139 accaagccttatcccactaagtggggtcggctacatggatcaaa 43573182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 44437730 - 44437769
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaat 40  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  44437730 accaagccttatcccactaagtggggtcggctacatgaat 44437769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 11414604 - 11414571
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctac 34  Q
    |||||| |||||||||||||||||||||||||||    
T  11414604 accaagccttatcccactaagtggtgtcggctac 11414571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 8181046 - 8181010
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  8181046 cttatcccactaagtggggtcggctacatggatcaaa 8181010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8560815 - 8560851
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  8560815 accaagtcttatcccactaagttgggtcggctacatg 8560851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 16521023 - 16521059
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  16521023 cttatcccactaagtggggtcggctacatggatcaaa 16521059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 35643221 - 35643185
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  35643221 accaagccttatcccactaagtggggtcggctacatg 35643185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38452695 - 38452731
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  38452695 accaagccttatcccactaagtggggtcggctacatg 38452731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000004; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4029395 - 4029352
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  4029395 accaagtcttatcccactaagtggggtcggctacatggatcaaa 4029352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26299341 - 26299298
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  26299341 accaagtcttatcccactaagtggggtcggctacatggatcaaa 26299298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28090703 - 28090746
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  28090703 accaagtcttatcccactaagtggggtcggctacatggatcaaa 28090746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28533740 - 28533697
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  28533740 accaagtcttatcccactaagtggggtcggctacatggatcaaa 28533697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 51440774 - 51440817
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  51440774 accaagtcttatcccactaagtggggtcggttacatgaatcaaa 51440817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 48861387 - 48861427
Alignment:
Q  4 aagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  48861387 aagtcttatcccactaagtggggtcggcgacatgaatcaaa 48861427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 990475 - 990518
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||  |||||||||||||||||||||||||||    
T  990475 accaagccttatcccgttaagtggtgtcggctacatgaatcaaa 990518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1211018 - 1210975
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  1211018 accaagccttatcccactaagtggggtcggctacatggatcaaa 1210975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22175418 - 22175375
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  22175418 accaagccttatcccactaagtggggtcggctacatggatcaaa 22175375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25979240 - 25979283
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  25979240 accaagccttatcccactaagtggggtcggctacatggatcaaa 25979283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29577525 - 29577482
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  29577525 accaagccttatcccactaagtggggtcggctacatggatcaaa 29577482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30202139 - 30202182
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  30202139 accaagccttatcccactaagtggggtcggctacatggatcaaa 30202182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37462885 - 37462928
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  37462885 accaagccttatcccactaagtggggtcggctacatggatcaaa 37462928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 39140780 - 39140745
Alignment:
Q  9 ttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  39140780 ttatcccactaagtggggtcggctacatgaatcaaa 39140745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41560502 - 41560459
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  41560502 accaagccttatcccactaagtggggtcggctacatggatcaaa 41560459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43481807 - 43481850
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  43481807 accaagccttatcccactaagtggggtcggctacatggatcaaa 43481850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44941785 - 44941828
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  44941785 accaagccttatcccactaagtggggtcggctacatggatcaaa 44941828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 49347402 - 49347445
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  49347402 accaagccttatcccactaagtggggtcggctacatggatcaaa 49347445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 52532625 - 52532668
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||    
T  52532625 accaagccttttcccactaagtggggtcggctacatgaatcaaa 52532668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 52561598 - 52561641
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  52561598 accaagccttatcccactaagtggggtcggctacatggatcaaa 52561641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52921353 - 52921310
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  52921353 accaagccttatcccactaagtggggtcggctacatggatcaaa 52921310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4707230 - 4707267
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatga 38  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  4707230 accaagccttatcccactaagtggggtcggctacatga 4707267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 19936731 - 19936690
Alignment:
Q  3 caagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||||| || |||||||||||| ||||||    
T  19936731 caagtcttatcccactaagcggagtcggctacatggatcaaa 19936690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 29808123 - 29808086
Alignment:
Q  7 tcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  29808123 tcttatcccactaagtggaatcggctacatgaatcaaa 29808086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4380232 - 4380197
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  4380232 accaagtcttatcccactaagtgg-gtcggctacatg 4380197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 4590548 - 4590584
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  4590548 cttatcccactaagtggggtcggctacatggatcaaa 4590584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8796482 - 8796446
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  8796482 accaagccttatcccactaagtggggtcggctacatg 8796446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 10272522 - 10272486
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  10272522 cttattccactaagtggggtcggctacatgaatcaaa 10272486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 32404542 - 32404578
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  32404542 cttatcccactaagtggggtcggctacatggatcaaa 32404578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38758029 - 38758065
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  38758029 accaagccttatcccactaagtggggtcggctacatg 38758065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38807680 - 38807716
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  38807680 accaagccttatcccactaagtggggtcggctacatg 38807716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 43240395 - 43240431
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||  |||||||||||||||||||    
T  43240395 cttatcccactaagtgaggtcggctacatgaatcaaa 43240431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 43898474 - 43898438
Alignment:
Q  9 ttatcccactaagtggtgtcggctacatgaatcaaaa 45  Q
    |||||||||||||||| || |||||||||||||||||    
T  43898474 ttatcccactaagtggggttggctacatgaatcaaaa 43898438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 46423232 - 46423268
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  46423232 cttatcccactaagtggggtcggctacatggatcaaa 46423268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000006; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14415269 - 14415306
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatga 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  14415269 accaagtcttatcccactaagtggggtcggctacatga 14415306  T

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Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 311318 - 311361
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  311318 accaagccttatcccactaagtggggtcggctacatgtatcaaa 311361  T

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Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3987607 - 3987564
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||    
T  3987607 accaagtcttatcccacaaagtggggtcgggtacatgaatcaaa 3987564  T

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Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5169105 - 5169062
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  5169105 accaagccttatcccactaagtggggtcggctacatggatcaaa 5169062  T

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Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12096714 - 12096757
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  12096714 accaagccttatcccactaagtggggtcggctacatggatcaaa 12096757  T

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Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31454234 - 31454277
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||    
T  31454234 accaagccttatcccactaagtggggtcggctaaatgaatcaaa 31454277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31566170 - 31566213
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  31566170 accaagccttatcccactaagtggggtcggctacatggatcaaa 31566213  T

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Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38060987 - 38060944
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||    
T  38060987 accaattcttatcccactaagtggggtcggctacatggatcaaa 38060944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41530034 - 41529991
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  41530034 accaagccttatcccactaagtggggtcggctacatggatcaaa 41529991  T

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Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 47233605 - 47233648
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||    
T  47233605 accaagccttatcccactaactggggtcggctacatgaatcaaa 47233648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48508508 - 48508465
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  48508508 accaagccttatcccactaagtggggtcggctacatggatcaaa 48508465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52139073 - 52139030
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  52139073 accaagccttatcccactaagtggggtcggctacatggatcaaa 52139030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 52927857 - 52927900
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  52927857 accaagccttatcccactaagtggggtcggctacatggatcaaa 52927900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 24778619 - 24778661
Alignment:
Q  2 ccaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||    
T  24778619 ccaagccttatcccactaagtggggtcggctacatggatcaaa 24778661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35032775 - 35032813
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaa 39  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  35032775 accaagccttatcccactaagtggggtcggctacatgaa 35032813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 27893355 - 27893319
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||  ||||||||||||||||||    
T  27893355 cttatcccactaagtgggatcggctacatgaatcaaa 27893319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 31146965 - 31146929
Alignment:
Q  8 cttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  31146965 cttatcccactaagtggagtcggctacatggatcaaa 31146929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 37351677 - 37351637
Alignment:
Q  4 aagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||| |||| ||||||||||| |||||||||||||||||||    
T  37351677 aagtgttattccactaagtggggtcggctacatgaatcaaa 37351637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39512816 - 39512780
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatg 37  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  39512816 accaagccttatcccactaagtggggtcggctacatg 39512780  T

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Target: scaffold0491 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3710 - 3667
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||||||||||||||||||||| ||||||||| || ||||||    
T  3710 accaagtcttatcccactaagtggggtcggctacttggatcaaa 3667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28898 - 28941
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  28898 accaagccttatcccactaagtggggtcggctacatggatcaaa 28941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 99295 - 99338
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| |||||||||||| |||||||||||||||||| |||||    
T  99295 accaagccttatcccactatgtggtgtcggctacatgattcaaa 99338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31741 - 31698
Alignment:
Q  1 accaagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  31741 accaagccttatcccactaagtggggtcggctacatggatcaaa 31698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 602 - 561
Alignment:
Q  3 caagtcttatcccactaagtggtgtcggctacatgaatcaaa 44  Q
    |||| ||||||||||||||||| |||||||||||| ||||||    
T  602 caagccttatcccactaagtggggtcggctacatggatcaaa 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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