View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17459_high_2 (Length: 345)
Name: NF17459_high_2
Description: NF17459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17459_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 27 - 316
Target Start/End: Complemental strand, 40696184 - 40695887
Alignment:
| Q |
27 |
gatgaatttattgttaggttctttatgtatactgacttcacagatctatgaatattcttttacaacagaaatagcaacttgagtaataatggtgtctttt |
126 |
Q |
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| T |
40696184 |
gatgaatttattgttaggttctttatgtgtactgacttcacagatctatgaatattcttttacaacagaaatagcaacttgagtaataatggtgtct-tt |
40696086 |
T |
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| Q |
127 |
ttcattttcttaattattatataaatggaaatgtcatcttatccaatctaggagga---------ataaagagagggaaattaatattcgagattttagg |
217 |
Q |
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| T |
40696085 |
ttcattttcttaattattatataaatggaaatgtcatcttatccaatctaggaggaataaaacttataaagagagggaaattaatatttgagattttagg |
40695986 |
T |
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| Q |
218 |
tcattcagttgtctatattttgcatttgaatcatctccttccctctagtgtagaacaaaagaagatggaaatttcaaaagagttgcatagagcattgtt |
316 |
Q |
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| T |
40695985 |
tcattcagttgtctatattttgcatttgaatcatctccttccctctagtgtagaacaaaagaagatggaaatttcaaaagagttggatagagcattgtt |
40695887 |
T |
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