View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17462_high_8 (Length: 331)
Name: NF17462_high_8
Description: NF17462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17462_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 9 - 316
Target Start/End: Original strand, 34577404 - 34577711
Alignment:
| Q |
9 |
gaagaatataaatctgaatacacttagagaaagtccaacaaggctcctttaatttactcaaacatgacagccaattgtctcttgactattatgcatgcta |
108 |
Q |
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| T |
34577404 |
gaagaatataaatctgaatacacttagagaaagtccaacaaggctcctttaatttactcaaacatgacagccaattgtctcttgactattatgcatgcta |
34577503 |
T |
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| Q |
109 |
caaattaatttcctctaggtttattatacaacaatgcttagctatatactctcatacacaaagggacaaatattgttgttaatatcttgatttctttgcc |
208 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34577504 |
caaattaatttcctttaggtttattatacaacaatgcttagctatatactctcatacacaaagggacaaatattgttgttaatatcttgatttctttgcc |
34577603 |
T |
|
| Q |
209 |
aagatttgttgtaaagggaaaaaatgtggcctattcgtgtccacatgttaatttacattgatgctagtatgagataaagggtcggccattatattcatac |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34577604 |
aagatttgttgtaaagggaaaaaatgtggcctattcgtgtccacatgttaatttacattgatgctagtatgagataaagggtcggccattatattcatac |
34577703 |
T |
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| Q |
309 |
aaccatct |
316 |
Q |
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|||||||| |
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| T |
34577704 |
aaccatct |
34577711 |
T |
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