View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17462_low_10 (Length: 332)
Name: NF17462_low_10
Description: NF17462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17462_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 14935329 - 14935651
Alignment:
| Q |
1 |
cggtcgcatatctaaataggaaagaagtgcagaaggcactgcatacacagcttgtgggaaattggtcaacatgtacttcgtaagttttacagtctgatcg |
100 |
Q |
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| T |
14935329 |
cggtcgcatatctaaataggaaagaagtgcagaaggcactgcatacacagcttgtgggaaattggtcaacatgtacttcgtaagttttacagtctgatcg |
14935428 |
T |
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| Q |
101 |
atagacgacttagcaatagagtttggatcctgttacaacttccaaaaactttggtctacatatataattgatttacaaaatgtttttcaatataagagac |
200 |
Q |
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| T |
14935429 |
atagacgacttagcaatagagtttggatcctgttacaacttccaaaaactttggtctacatatataattgatttacaaaatgtttttcaatataagagac |
14935528 |
T |
|
| Q |
201 |
caaattggcgatttagatgaaattaaatagaaaagtaattgtaatataaatagaacataaatttcaatattcaacttggttatatctcatccattcattt |
300 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14935529 |
caaattggcgatttagacgaaattaaatagaaaagtaattgtaatataaatagaacataaatttcaatattcaacttggttatatctcatccattcattt |
14935628 |
T |
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| Q |
301 |
ccactttttatcgtgagaataat |
323 |
Q |
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||||||||||||||||||||||| |
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| T |
14935629 |
ccactttttatcgtgagaataat |
14935651 |
T |
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