View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17462_low_18 (Length: 233)

Name: NF17462_low_18
Description: NF17462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17462_low_18
NF17462_low_18
[»] chr1 (32 HSPs)
chr1 (1-233)||(5756570-5756802)
chr1 (1-233)||(6074428-6074645)
chr1 (20-99)||(7218092-7218171)
chr1 (20-99)||(7262536-7262615)
chr1 (1-56)||(15360848-15360903)
chr1 (1-68)||(37842404-37842471)
chr1 (32-106)||(25005808-25005882)
chr1 (5-99)||(36151523-36151617)
chr1 (22-60)||(40394942-40394980)
chr1 (20-81)||(17269223-17269284)
chr1 (1-70)||(49517024-49517093)
chr1 (1-81)||(27738216-27738296)
chr1 (1-190)||(31517671-31517856)
chr1 (1-44)||(30815708-30815751)
chr1 (1-64)||(34380399-34380462)
chr1 (20-78)||(4215345-4215403)
chr1 (4-58)||(7273998-7274052)
chr1 (1-99)||(25479535-25479633)
chr1 (4-70)||(28467354-28467420)
chr1 (1-99)||(31294539-31294637)
chr1 (4-81)||(4200186-4200263)
chr1 (20-81)||(4549578-4549639)
chr1 (20-77)||(25006074-25006131)
chr1 (4-65)||(30371105-30371166)
chr1 (1-78)||(42556670-42556747)
chr1 (1-41)||(6976902-6976942)
chr1 (20-68)||(8130409-8130457)
chr1 (28-68)||(12564923-12564963)
chr1 (1-77)||(26630417-26630493)
chr1 (1-65)||(33527199-33527263)
chr1 (35-99)||(33976674-33976738)
chr1 (4-60)||(46980186-46980242)
[»] chr5 (22 HSPs)
chr5 (1-81)||(14295460-14295540)
chr5 (1-59)||(28586824-28586882)
chr5 (3-64)||(2933704-2933765)
chr5 (28-81)||(16328847-16328899)
chr5 (1-68)||(12595789-12595856)
chr5 (11-68)||(41277399-41277456)
chr5 (4-60)||(4855655-4855711)
chr5 (19-98)||(7319378-7319457)
chr5 (6-81)||(38047891-38047966)
chr5 (2-81)||(39257423-39257501)
chr5 (1-67)||(12407711-12407777)
chr5 (20-81)||(18543232-18543294)
chr5 (23-81)||(26390826-26390884)
chr5 (1-75)||(35960368-35960441)
chr5 (10-99)||(12425534-12425623)
chr5 (2-99)||(31694473-31694570)
chr5 (1-54)||(35135725-35135778)
chr5 (10-59)||(38831514-38831563)
chr5 (1-38)||(42583103-42583140)
chr5 (4-68)||(9634729-9634793)
chr5 (1-58)||(14599362-14599421)
chr5 (29-65)||(19177461-19177497)
[»] chr7 (20 HSPs)
chr7 (3-78)||(5006548-5006623)
chr7 (2-67)||(9527140-9527205)
chr7 (4-68)||(45777220-45777284)
chr7 (4-78)||(1417221-1417295)
chr7 (4-81)||(17989059-17989136)
chr7 (1-81)||(30456486-30456566)
chr7 (47-101)||(514767-514821)
chr7 (20-81)||(28340432-28340493)
chr7 (4-68)||(28613583-28613647)
chr7 (1-68)||(11208403-11208470)
chr7 (1-60)||(35266853-35266912)
chr7 (5-63)||(25659936-25659994)
chr7 (7-81)||(29363478-29363552)
chr7 (1-75)||(40689028-40689102)
chr7 (134-195)||(29574492-29574553)
chr7 (46-99)||(47130803-47130856)
chr7 (1-81)||(3610776-3610856)
chr7 (10-58)||(31338471-31338519)
chr7 (28-60)||(46082015-46082047)
chr7 (1-77)||(47004041-47004117)
[»] chr3 (26 HSPs)
chr3 (1-107)||(52618957-52619063)
chr3 (4-99)||(1816540-1816635)
chr3 (20-130)||(41452496-41452606)
chr3 (1-66)||(10101527-10101592)
chr3 (1-66)||(10212452-10212517)
chr3 (1-126)||(10357387-10357512)
chr3 (1-81)||(24887319-24887399)
chr3 (1-68)||(24235732-24235799)
chr3 (2-68)||(28306113-28306179)
chr3 (2-68)||(31337450-31337516)
chr3 (1-78)||(36646421-36646498)
chr3 (1-45)||(15304419-15304463)
chr3 (20-67)||(3467438-3467485)
chr3 (20-99)||(21367640-21367719)
chr3 (1-68)||(36783383-36783450)
chr3 (1-44)||(49586989-49587032)
chr3 (23-113)||(16990165-16990255)
chr3 (23-81)||(43875624-43875682)
chr3 (31-128)||(3044248-3044345)
chr3 (4-65)||(28779313-28779374)
chr3 (1-78)||(54775082-54775158)
chr3 (4-64)||(20192659-20192719)
chr3 (4-68)||(25183037-25183101)
chr3 (1-81)||(25699197-25699277)
chr3 (4-81)||(33965525-33965604)
chr3 (4-60)||(51197793-51197848)
[»] chr4 (30 HSPs)
chr4 (4-99)||(10192241-10192335)
chr4 (1-81)||(17884022-17884102)
chr4 (4-60)||(42321936-42321992)
chr4 (4-68)||(55870390-55870454)
chr4 (5-99)||(2996531-2996625)
chr4 (1-67)||(24160545-24160611)
chr4 (8-81)||(927437-927510)
chr4 (4-81)||(49085946-49086023)
chr4 (4-68)||(437481-437545)
chr4 (20-128)||(29263343-29263451)
chr4 (1-81)||(52735076-52735156)
chr4 (1-60)||(24929447-24929506)
chr4 (1-68)||(30207620-30207686)
chr4 (1-44)||(30338665-30338708)
chr4 (7-54)||(46247178-46247225)
chr4 (2-52)||(5219565-5219615)
chr4 (47-120)||(16494802-16494875)
chr4 (1-38)||(26520308-26520345)
chr4 (10-95)||(31034655-31034740)
chr4 (28-81)||(42866049-42866102)
chr4 (28-81)||(46415828-46415881)
chr4 (1-66)||(53626730-53626795)
chr4 (1-78)||(54325076-54325153)
chr4 (1-57)||(4071836-4071892)
chr4 (20-60)||(6927550-6927590)
chr4 (1-53)||(11389480-11389532)
chr4 (28-60)||(22471312-22471344)
chr4 (1-65)||(25885813-25885877)
chr4 (47-99)||(27721717-27721769)
chr4 (29-81)||(36722705-36722757)
[»] chr6 (18 HSPs)
chr6 (1-77)||(1402950-1403026)
chr6 (9-81)||(3785736-3785808)
chr6 (1-107)||(4006668-4006774)
chr6 (1-81)||(24836238-24836315)
chr6 (4-60)||(28660817-28660873)
chr6 (134-197)||(2455893-2455956)
chr6 (4-70)||(2027453-2027519)
chr6 (1-59)||(6310282-6310340)
chr6 (29-99)||(8035166-8035236)
chr6 (1-67)||(9093606-9093672)
chr6 (3-80)||(281885-281962)
chr6 (1-78)||(5328928-5329004)
chr6 (20-101)||(8420213-8420294)
chr6 (22-99)||(31671092-31671169)
chr6 (1-81)||(2117357-2117437)
chr6 (1-65)||(4247113-4247177)
chr6 (9-101)||(25100005-25100097)
chr6 (1-81)||(33787781-33787861)
[»] chr2 (31 HSPs)
chr2 (15-107)||(1625868-1625960)
chr2 (1-83)||(3673761-3673843)
chr2 (7-108)||(11513858-11513959)
chr2 (10-107)||(18066091-18066188)
chr2 (5-81)||(28803542-28803618)
chr2 (1-81)||(30537563-30537643)
chr2 (23-79)||(37276722-37276778)
chr2 (5-60)||(14666506-14666561)
chr2 (1-76)||(17952742-17952817)
chr2 (7-78)||(37292386-37292457)
chr2 (1-107)||(10563568-10563674)
chr2 (4-78)||(18962077-18962151)
chr2 (1-78)||(10143126-10143203)
chr2 (1-66)||(33256694-33256759)
chr2 (2-81)||(15780034-15780111)
chr2 (1-60)||(5133726-5133785)
chr2 (1-68)||(15377719-15377786)
chr2 (10-101)||(36863641-36863732)
chr2 (1-60)||(37053548-37053607)
chr2 (34-113)||(39983329-39983408)
chr2 (34-101)||(43985019-43985086)
chr2 (40-98)||(9477945-9478003)
chr2 (9-99)||(13630299-13630389)
chr2 (1-51)||(33192147-33192197)
chr2 (11-68)||(5043609-5043666)
chr2 (4-81)||(6227708-6227785)
chr2 (9-66)||(33942112-33942169)
chr2 (4-68)||(43299451-43299516)
chr2 (1-57)||(31740019-31740075)
chr2 (1-81)||(34054937-34055017)
chr2 (1-81)||(43199368-43199448)
[»] chr8 (29 HSPs)
chr8 (20-119)||(26284793-26284892)
chr8 (2-99)||(7714197-7714294)
chr8 (4-81)||(34551077-34551154)
chr8 (8-52)||(25872471-25872515)
chr8 (1-68)||(27728070-27728137)
chr8 (5-99)||(39551227-39551321)
chr8 (1-73)||(8799359-8799431)
chr8 (1-81)||(13561348-13561428)
chr8 (1-81)||(13652169-13652249)
chr8 (1-81)||(13710812-13710892)
chr8 (8-108)||(41336654-41336754)
chr8 (20-99)||(6864477-6864556)
chr8 (2-81)||(31915305-31915384)
chr8 (1-68)||(35453672-35453739)
chr8 (22-65)||(38260507-38260550)
chr8 (22-65)||(43704430-43704473)
chr8 (1-59)||(10727151-10727209)
chr8 (34-128)||(11185208-11185302)
chr8 (5-99)||(31862451-31862545)
chr8 (8-78)||(34770853-34770923)
chr8 (34-127)||(26473742-26473835)
chr8 (1-66)||(42597355-42597420)
chr8 (55-103)||(1433556-1433604)
chr8 (1-81)||(4558752-4558832)
chr8 (20-68)||(10222834-10222882)
chr8 (1-41)||(27119984-27120024)
chr8 (6-101)||(35298493-35298589)
chr8 (32-68)||(39561590-39561626)
chr8 (4-44)||(42237495-42237535)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-60)||(27530-27589)


Alignment Details
Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 5756802 - 5756570
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5756802 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttaccaaaataagttgaaaat 5756703  T
Q  101 atcttatatacatattataaggtgtttctaactataagctctccgaaacacgctcacaagtgcttatgccggtaaataagcgtaaataagtcaattcggg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5756702 atcttatatacatattataaggtgtttctaactataagctctccgaaacacgctcacaagtgcttatgccggtaaataagcgtaaataagtcaattcagg 5756603  T
Q  201 caaaccttaaccttttgtttcatcaacaacact 233  Q
    |||||||||||||||||||||||||||||||||    
T  5756602 caaaccttaaccttttgtttcatcaacaacact 5756570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 6074428 - 6074645
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  6074428 ttctataacaaaagatgatataaagttaaactgttttcatataagctatgagttgttttcttaagctagcctgaagagcttaccaaaataagttgaaaat 6074527  T
Q  101 atcttatatacatattataaggtgtttctaactataagctctccgaaacacgctcacaagtgcttatgccggtaaataagcgtaaataagtcaattcggg 200  Q
    |||||||  |||||||||||||||               | ||| |||||||||||||||||||||||||  | ||||||||||||||||||||| | ||    
T  6074528 atcttatggacatattataaggtg---------------tgtccaaaacacgctcacaagtgcttatgccaatgaataagcgtaaataagtcaatccagg 6074612  T
Q  201 caaaccttaaccttttgtttcatcaacaacact 233  Q
    | ||||||| |||||||||||||||||||||||    
T  6074613 ccaaccttagccttttgtttcatcaacaacact 6074645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 7218171 - 7218092
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    ||||||| ||| |||||||||||||  |||||||||||||| ||| ||| |||||||| |||   |||||||||||||||    
T  7218171 ataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaa 7218092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 7262615 - 7262536
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    ||||||||||||||||||||| | || |||||||| ||||| ||||||| |||| ||||||||   ||||||| ||||||    
T  7262615 ataaagttaaactgttttcattttaagtataagttcttttcataagctatcctgaagagcttgtggaaataaggtgaaaa 7262536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15360848 - 15360903
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgt 56  Q
    |||||||||||||||| | ||||||| |||||||||||||||||  ||||||||||    
T  15360848 ttctataacaaaagataaaataaagtcaaactgttttcatataagctataagttgt 15360903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 37842471 - 37842404
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    ||||||| |||||||||| ||||||||||||||| |||  ||||  |||||||||||||| |||||||    
T  37842471 ttctatagcaaaagatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagcta 37842404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 25005882 - 25005808
Alignment:
Q  32 tgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaatatctta 106  Q
    |||||||||||||  |||||||||||||| ||||||| ||||||||||||   |||| ||| | |||||||||||    
T  25005882 tgttttcatataagctataagttgttttcataagctatcctggagagcttataaaaacaagcttaaaatatctta 25005808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 36151617 - 36151523
Alignment:
Q  5 ataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    |||||||||||| | ||||||| ||| ||||||| ||||| |||||| |||||||||||| | | ||| | ||||||   |||||||||||||||    
T  36151617 ataacaaaagataaaataaagtcaaattgttttcgtataagttataaattgttttcgtaaacaatcctagtgagcttatgaaaataagttgaaaa 36151523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 40394980 - 40394942
Alignment:
Q  22 aaagttaaactgttttcatataaattataagttgttttc 60  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  40394980 aaagttaaattgttttcatataaattataagttgttttc 40394942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 17269223 - 17269284
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||| ||| |||||||||||||   ||||||||||||| ||||||| ||||||||||||    
T  17269223 ataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggagagctt 17269284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 49517024 - 49517093
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagc 70  Q
    |||||||||||||||| | ||||||| ||| ||||||||| |||  |||||| ||||||| |||||||||    
T  49517024 ttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataagctagc 49517093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 27738296 - 27738216
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||| |||||||||| | ||||||| ||| |||||||||||||  ||||| |||||||| |||||||  | |||||||||    
T  27738296 ttctacaacaaaagataaaataaagtcaaattgttttcatataagctataatttgttttcataagctatacaggagagctt 27738216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 31517856 - 31517671
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaat 100  Q
    ||||| |||||||||| | ||||||||||| || ||||||||||  |||||| ||| ||| ||| ||  | ||||||||||   |||||||| ||||||     
T  31517856 ttctacaacaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaac 31517757  T
Q  101 atcttatatacatattataaggtgtttctaactataagctctccgaaacacgctcacaagtgcttatgccggtaaataagcgtaaataag 190  Q
    | |||||  |||| | || || |||||  |    |||| ||||| |||||  |||||||||||||||||| ||||||||||  |||||||    
T  31517756 agcttatgaacatgtcatgagttgttttga----taagttctcccaaacagtctcacaagtgcttatgccagtaaataagctcaaataag 31517671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30815751 - 30815708
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataa 44  Q
    |||||||||||||||| | ||||||||||||| |||||||||||    
T  30815751 ttctataacaaaagataaaataaagttaaactattttcatataa 30815708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34380399 - 34380462
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaa 64  Q
    ||||| ||||||||||   ||||||| ||||||||| |||||| |||||| |||||||||||||    
T  34380399 ttctaaaacaaaagatacaataaagtcaaactgtttgcatatacattatatgttgttttcgtaa 34380462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 4215345 - 4215403
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagag 78  Q
    ||||||| |||||||||||||||||| ||| ||| ||||||||||| || ||| |||||    
T  4215345 ataaagtcaaactgttttcatataaactatgagtcgttttcgtaagttatccttgagag 4215403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 7274052 - 7273998
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttt 58  Q
    ||||||||||||||| ||||||| ||| |||||||||| || ||||||| |||||    
T  7274052 tataacaaaagatgaaataaagtcaaattgttttcatacaagttataagctgttt 7273998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 25479535 - 25479633
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    ||||||||| |||||| | |||| || ||| ||| ||||||||   |||||||||||||| ||||||| ||| ||||||||   |||||||| ||||||    
T  25479535 ttctataaccaaagataaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaa 25479633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 28467420 - 28467354
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagc 70  Q
    ||||||||||||| | ||||||| ||| | |||||||||||  || ||||||||||| |||||||||    
T  28467420 tataacaaaagataaaataaagtcaaattattttcatataagctacaagttgttttcataagctagc 28467354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 31294637 - 31294539
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    |||||||||||||||| | |||  || ||||| ||| || ||||| ||||||||||||| |||| ||| | | ||||||||   |||||||||||||||    
T  31294637 ttctataacaaaagataaaatatggtaaaactatttccacataaactataagttgtttttgtaaactatcatagagagcttatgaaaataagttgaaaa 31294539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 4200186 - 4200263
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||||||||| | ||||||| ||  |||||||||||||  ||||  ||||||||||||| || ||||||| ||||    
T  4200186 tataacaaaagataaaataaagtcaagttgttttcatataagctatatattgttttcgtaagatatcctggagggctt 4200263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 4549639 - 4549578
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||| |||||||||||||| ||  |||||| ||||||| ||||| | ||||||||||||    
T  4549639 ataaagtaaaactgttttcatacaagctataagatgttttcataagcaatcctggagagctt 4549578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 25006131 - 25006074
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggaga 77  Q
    ||||||| ||| |||||||||||||  |||||||||||||| ||||||| | ||||||    
T  25006131 ataaagtcaaattgttttcatataagctataagttgttttcataagctatcttggaga 25006074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 30371105 - 30371166
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaag 65  Q
    ||||||||||||| | ||||| | ||| |||||||||||||  |||||||||||||| ||||    
T  30371105 tataacaaaagataaaataaactcaaattgttttcatataagctataagttgttttcataag 30371166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42556747 - 42556670
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagag 78  Q
    |||||| ||||||||||| ||||| | |||||  ||| ||||||  |||||||||||||| ||||||| | |||||||    
T  42556747 ttctatgacaaaagatgaaataaaatcaaactacttttatataagctataagttgttttcataagctatcatggagag 42556670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6976902 - 6976942
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcata 41  Q
    |||||||||||||||| | ||||||||||||| ||||||||    
T  6976902 ttctataacaaaagataagataaagttaaactattttcata 6976942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 8130409 - 8130457
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    ||||||| |||||||||||| ||||  |||||||||||||| |||||||    
T  8130409 ataaagtcaaactgttttcacataagctataagttgttttcataagcta 8130457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 12564963 - 12564923
Alignment:
Q  28 aaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    |||||||||||||||||  |||||||||||||| |||||||    
T  12564963 aaactgttttcatataagctataagttgttttcataagcta 12564923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26630417 - 26630493
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggaga 77  Q
    ||||||||||||| |||| ||||||| ||| |||||||||||||  |||||  ||||||  || |||| ||||||||    
T  26630417 ttctataacaaaaaatgaaataaagtaaaattgttttcatataagctataaactgttttgatacgctatcctggaga 26630493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33527263 - 33527199
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaag 65  Q
    ||||| |||||||||| | ||| ||| |||||||||||||||||  |||||| ||||||| ||||    
T  33527263 ttctaaaacaaaagataaaatacagtcaaactgttttcatataatctataagctgttttcataag 33527199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 33976674 - 33976738
Alignment:
Q  35 tttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    |||||||||| ||||||||||||||| ||| ||| ||| ||||||||    ||||||||||||||    
T  33976674 tttcatataagttataagttgttttcttaacctatcctagagagcttatggaaataagttgaaaa 33976738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 46980242 - 46980186
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttc 60  Q
    |||| |||||||| | ||||||  ||||||||||||||||| |||||| ||||||||    
T  46980242 tatatcaaaagataaaataaagacaaactgttttcatataagttataaattgttttc 46980186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 1e-21; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14295460 - 14295540
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||||||||||||||| | ||||||| |||||||||||||||||  |||||| ||||||||||||||| ||||||||||||    
T  14295460 ttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagctt 14295540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 28586882 - 28586824
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgtttt 59  Q
    |||||||||||||||| | ||||||| ||||||||||||||||||||||||| ||||||    
T  28586882 ttctataacaaaagataaaataaagtcaaactgttttcatataaattataagctgtttt 28586824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 2933765 - 2933704
Alignment:
Q  3 ctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaa 64  Q
    |||||| ||||||| | || |||||||||||||||||||||| |||||||||||||| ||||    
T  2933765 ctataataaaagataaaatgaagttaaactgttttcatataagttataagttgtttttgtaa 2933704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 16328847 - 16328899
Alignment:
Q  28 aaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  16328847 aaactgttttcatataaattataaactgttttcgtaagcta-cctggagagctt 16328899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 12595856 - 12595789
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    |||||||||||||||| | ||||||||||| |||||||||||||| ||| || || |||| |||||||    
T  12595856 ttctataacaaaagataaaataaagttaaattgttttcatataaactatgagctggtttcataagcta 12595789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 41277456 - 41277399
Alignment:
Q  11 aaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    |||||| | ||||||| ||||||||||||||||| ||| ||||||||||| |||||||    
T  41277456 aaagataaaataaagtcaaactgttttcatataagttaaaagttgttttcataagcta 41277399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 4855655 - 4855711
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttc 60  Q
    |||||||||| || | ||||||||||| |||| |||||||| |||||||||||||||    
T  4855655 tataacaaaaaataaaataaagttaaattgttatcatataagttataagttgttttc 4855711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 7319378 - 7319457
Alignment:
Q  19 tataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaa 98  Q
    |||||||||||| |||||||||||||  |||||  ||||||||||||||| | |||||| |||   |||||||| |||||    
T  7319378 tataaagttaaattgttttcatataagctataaactgttttcgtaagctatcttggagaacttataaaaataagctgaaa 7319457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 38047966 - 38047891
Alignment:
Q  6 taacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||||||| | ||||||| ||| | |||||||||| | |||| | ||||||| ||||||| ||||||||||||    
T  38047966 taacaaaagataaaataaagtcaaattattttcatatatactatatgctgttttcataagctatcctggagagctt 38047891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 39257501 - 39257423
Alignment:
Q  2 tctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||||||||| | | ||||||| ||||  |||||||||||| |||||||||||||| ||||| | | ||||||||||    
T  39257501 tctataacaaaaggtaaaataaagtcaaacc-ttttcatataaactataagttgttttcataagcaatcatggagagctt 39257423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12407777 - 12407711
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagct 67  Q
    |||||||||||||||| | ||||||| || |||||||||| ||| ||||||||  ||||| ||||||    
T  12407777 ttctataacaaaagataaaataaagtaaatctgttttcatgtaagttataagtcattttcataagct 12407711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 18543294 - 18543232
Alignment:
Q  20 ataaagttaaact-gttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||| ||||| ||||| ||||||  |||||||||||||| ||||||| ||||||||||||    
T  18543294 ataaagtcaaacttgtttttatataagatataagttgttttcataagctatcctggagagctt 18543232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 26390884 - 26390826
Alignment:
Q  23 aagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||||||||||||||||||  |||||| || |||| |||| || ||||||||||||    
T  26390884 aagttaaactgttttcatataagctataagatggtttcctaagttatcctggagagctt 26390826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 35960368 - 35960441
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctgga 75  Q
    |||||||| ||||||| | ||||||| ||||| ||| |||||||| ||||||||| |||| ||||||| ||||||    
T  35960368 ttctataataaaagataaaataaagtcaaactattt-catataaactataagttgatttcataagctatcctgga 35960441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 12425534 - 12425623
Alignment:
Q  10 aaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    ||||||| | ||||||||||| ||||||| |||||  |||||| |||||||  |||||| | |||||| |||   |||||||||||||||    
T  12425534 aaaagataaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaa 12425623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 31694473 - 31694570
Alignment:
Q  2 tctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    |||||||||||| || |  |||||| |||||||||| ||| ||| ||||||||||| || ||||||  | || |||||||   |||||||||||||||    
T  31694473 tctataacaaaacataaactaaagtcaaactgtttttatacaaactataagttgttctcttaagctcacttgtagagcttatgaaaataagttgaaaa 31694570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35135778 - 35135725
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagtt 54  Q
    |||||||||||||||| | ||||||| ||||| |||||||||||  ||||||||    
T  35135778 ttctataacaaaagataaaataaagtcaaactattttcatataagctataagtt 35135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 38831563 - 38831514
Alignment:
Q  10 aaaagatgatataaagttaaactgttttcatataaattataagttgtttt 59  Q
    ||||||| | ||||||| ||||||||||| ||||||| ||||||||||||    
T  38831563 aaaagataaaataaagtcaaactgttttcgtataaatgataagttgtttt 38831514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42583103 - 42583140
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttc 38  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  42583103 ttctataacaaaagatgaaataaagttaaattgttttc 42583140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 9634729 - 9634793
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    |||||||||||||||  ||||||  || | ||||||||||  ||||||||||||||| |||||||    
T  9634729 tataacaaaagatgaactaaagtcgaagtattttcatatatgttataagttgttttcataagcta 9634793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14599421 - 14599362
Alignment:
Q  1 ttctataacaaaa--gatgatataaagttaaactgttttcatataaattataagttgttt 58  Q
    |||||||||||||  ||| | || |||| ||||||||||||||||| |||||||||||||    
T  14599421 ttctataacaaaactgataaaattaagtcaaactgttttcatataagttataagttgttt 14599362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 19177461 - 19177497
Alignment:
Q  29 aactgttttcatataaattataagttgttttcgtaag 65  Q
    ||||||||||||||||  |||||||||||||||||||    
T  19177461 aactgttttcatataagctataagttgttttcgtaag 19177497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 3e-16; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 5006623 - 5006548
Alignment:
Q  3 ctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagag 78  Q
    |||||||||||||| | ||||||| |||||||||||||||||  ||||| |||||||| ||||||| |||||||||    
T  5006623 ctataacaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttcataagctaccctggagag 5006548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 9527205 - 9527140
Alignment:
Q  2 tctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagct 67  Q
    |||||||||||||||   ||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  9527205 tctataacaaaagatataataaagtcaaactgttttcatataaactataagttgttttcataagct 9527140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 45777284 - 45777220
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    ||||||||||||| | || |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  45777284 tataacaaaagataaaattaagtcaaactgttttcatataaactataagttgttttcgtaggcta 45777220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 1417221 - 1417295
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagag 78  Q
    ||||||||||||| | ||||||| ||| |||||||||||||   ||||||||||||| ||||||||| |||||||    
T  1417221 tataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttcataagctagcatggagag 1417295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 17989136 - 17989059
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||||||||| || | ||||||| |||||||||||||||||| ||||| |||||||| ||||||  |||| |||||||    
T  17989136 tataacaaaatataaaataaagtcaaactgttttcatataaactataatttgttttcataagctctcctgaagagctt 17989059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30456566 - 30456486
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||| |||||||||| | ||||||| ||| ||||||||||||| |||||||| |||||| ||| ||| | ||||||||||    
T  30456566 ttctaaaacaaaagataaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagctt 30456486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 514767 - 514821
Alignment:
Q  47 tataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaata 101  Q
    |||||| ||||||| ||||||| ||||||||||||| ||||||||| ||||||||    
T  514767 tataagctgttttcataagctatcctggagagcttgtcaaaataagctgaaaata 514821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 28340493 - 28340432
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||| ||||||||||||| ||| |||||||||||||||  ||||||  |||||||||||    
T  28340493 ataaagtcaaactgttttcatgtaagttataagttgttttcagaagctatgctggagagctt 28340432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 28613647 - 28613583
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    ||||||||||||| | | ||||||||| ||||||  ||||| |||||||||||| ||||||||||    
T  28613647 tataacaaaagataaaacaaagttaaattgtttttgtataagttataagttgttgtcgtaagcta 28613583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 11208403 - 11208470
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    ||||| |||||||||| | ||||| | |||| ||||||||||||| |||| ||||||||| |||||||    
T  11208403 ttctacaacaaaagataaaataaactcaaaccgttttcatataaactatatgttgttttcataagcta 11208470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 35266853 - 35266912
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttc 60  Q
    |||||||||||| ||| | ||||||||||| | ||||||||||||||||||  |||||||    
T  35266853 ttctataacaaatgattaaataaagttaaatttttttcatataaattataaaatgttttc 35266912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 25659994 - 25659936
Alignment:
Q  5 ataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgta 63  Q
    |||||||||||| | | ||||| |||||||||||||||||| | |||||| ||||||||    
T  25659994 ataacaaaagataaaacaaagtgaaactgttttcatataaactgtaagttattttcgta 25659936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 29363478 - 29363552
Alignment:
Q  7 aacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||| ||||| | ||||||| ||||||||||||||| | ||||||| |||| || |||| || ||||||||||||    
T  29363478 aacagaagataaaataaagtcaaactgttttcatattagttataagctgttatcataagttatcctggagagctt 29363552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 40689102 - 40689028
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctgga 75  Q
    ||||||| |||||||| | ||||||||||| | |||||||||||  |||||| ||| ||| ||||||| ||||||    
T  40689102 ttctatagcaaaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctgga 40689028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 29574553 - 29574492
Alignment:
Q  134 ataagctctccgaaacacgctcacaagtgcttatgccggtaaataagcgtaaataagtcaat 195  Q
    ||||| |||||||||||  ||||||| |||||||||||||||| ||||   |||||||||||    
T  29574553 ataagttctccgaaacagtctcacaactgcttatgccggtaaagaagcacgaataagtcaat 29574492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 47130856 - 47130803
Alignment:
Q  46 ttataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    ||||||||||||||| ||||||| | |||||| ||||  |||||||||||||||    
T  47130856 ttataagttgttttcataagctatcttggagaacttgtgaaaataagttgaaaa 47130803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3610856 - 3610776
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||| |||||||||| | || |||  ||||||||||  |||||  |||||||||||||||||| ||| ||| ||||||||    
T  3610856 ttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttcgtaaactatcctagagagctt 3610776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 31338471 - 31338519
Alignment:
Q  10 aaaagatgatataaagttaaactgttttcatataaattataagttgttt 58  Q
    ||||||| | ||||||| |||||||||| |||||| |||||||||||||    
T  31338471 aaaagataaaataaagtcaaactgtttttatataagttataagttgttt 31338519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 46082015 - 46082047
Alignment:
Q  28 aaactgttttcatataaattataagttgttttc 60  Q
    ||||||||||||||||| |||||||||||||||    
T  46082015 aaactgttttcatataagttataagttgttttc 46082047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 47004041 - 47004117
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggaga 77  Q
    ||||||||||| |||| | ||||||| ||||| |||| |||| || |||||| ||||||| ||||||| | ||||||    
T  47004041 ttctataacaatagataaaataaagtcaaactatttttatatgaactataagctgttttcataagctaccatggaga 47004117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 52618957 - 52619063
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaat 100  Q
    ||||| |||||| ||| | ||||||||||| ||||||||||||| ||||||| |||||||  |||||| | || ||||||||  |||||||| |||||||    
T  52618957 ttctaaaacaaatgattaaataaagttaaattgttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaataaggtgaaaat 52619056  T
Q  101 atcttat 107  Q
    | |||||    
T  52619057 agcttat 52619063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 1816540 - 1816635
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    ||||| ||||||| | ||||||| ||||||||||  |||||  |||||||||||||| |||||||  |||||||||||  ||||||||| ||||||    
T  1816540 tataataaaagataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaa 1816635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 41452496 - 41452606
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaatatcttatatacatattata 119  Q
    ||||||| ||||||||||||||| | || |||| ||||||| ||||||| ||||||||  |||   ||||||| |||||| | |||||| |||||| |||    
T  41452496 ataaagtcaaactgttttcatattagttgtaagctgttttcataagctatcctggagaagttgtggaaataaggtgaaaacagcttatagacatatcata 41452595  T
Q  120 aggtgtttcta 130  Q
    || ||||||||    
T  41452596 agttgtttcta 41452606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10101592 - 10101527
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagc 66  Q
    |||||||||||||||| | ||||||||||| |||||||||||||  || ||||||||||| |||||    
T  10101592 ttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataagc 10101527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10212517 - 10212452
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagc 66  Q
    |||||||||||||||| | ||||||||||| |||||||||||||  || ||||||||||| |||||    
T  10212517 ttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataagc 10212452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 10357387 - 10357512
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaat 100  Q
    |||||||||||||||| | |||| |||||| | |||||||||||  || ||||||||||| ||||| | | | |||||||| |  |||||| | ||||||    
T  10357387 ttctataacaaaagataaaataatgttaaatttttttcatataagatacaagttgttttcataagccatcttagagagcttactgaaataactcgaaaat 10357486  T
Q  101 atcttatatacatattataaggtgtt 126  Q
    | ||||||||||| | ||||| ||||    
T  10357487 agcttatatacatgtcataagttgtt 10357512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 24887399 - 24887319
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||||||| |||| | ||||||| ||||||| |||||||||  || ||| ||||||| ||||||| ||||||||||||    
T  24887399 ttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagctt 24887319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24235799 - 24235732
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    |||||||||||||||| ||||||||| ||||| |||  ||||||  |||||||||||||| |||||||    
T  24235799 ttctataacaaaagataatataaagtcaaactatttgaatataagctataagttgttttcataagcta 24235732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 28306113 - 28306179
Alignment:
Q  2 tctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    ||||||||||||  | | ||||||| ||||||||||||||||| ||| ||||||||||| |||||||    
T  28306113 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 28306179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 31337516 - 31337450
Alignment:
Q  2 tctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    |||| |||||||||| | ||||||| |||||||||| |||||| ||||||||||| ||| |||||||    
T  31337516 tctaaaacaaaagataaaataaagtcaaactgtttttatataagttataagttgtattcataagcta 31337450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36646498 - 36646421
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagag 78  Q
    |||||| ||||||||| | |||||||  || ||||||||||||| |||||| |||||||| ||||||| ||| |||||    
T  36646498 ttctatgacaaaagataaaataaagtataattgttttcatataagttataacttgttttcataagctatcctagagag 36646421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15304463 - 15304419
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaa 45  Q
    |||||||||||||||| | ||||||||||| ||||||||||||||    
T  15304463 ttctataacaaaagataaaataaagttaaattgttttcatataaa 15304419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 3467485 - 3467438
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttcgtaagct 67  Q
    ||||||| ||| |||||||||||| | |||||||||||||||||||||    
T  3467485 ataaagtcaaattgttttcatatagactataagttgttttcgtaagct 3467438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 21367640 - 21367719
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    ||||||||||| ||||||| |||||  |||||||||||||| ||||||| | |||||| |||   |||||||| ||||||    
T  21367640 ataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaa 21367719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36783450 - 36783383
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    ||||||| |||||||| | ||||||| ||| |||||||||||||| ||| || ||||||| |||||||    
T  36783450 ttctataccaaaagataaaataaagtaaaattgttttcatataaactattagctgttttcataagcta 36783383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 49587032 - 49586989
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataa 44  Q
    |||||||||||||||| | ||||||| |||||||||||||||||    
T  49587032 ttctataacaaaagataaaataaagtcaaactgttttcatataa 49586989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 16990255 - 16990165
Alignment:
Q  23 aagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaatatcttatatacat 113  Q
    ||||||||||||||||||||||  |||||||||||||| ||| ||| | || ||| ||||   ||||||| |||||| | |||||| ||||    
T  16990255 aagttaaactgttttcatataagatataagttgttttcttaaactatcatgaagaacttgtgcaaataagctgaaaacaacttatagacat 16990165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 43875624 - 43875682
Alignment:
Q  23 aagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||| |||||||| ||||||||  |||||||||||||| ||||||| | ||||||||||    
T  43875624 aagtcaaactgttctcatataagctataagttgttttcataagctatcatggagagctt 43875682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 3044345 - 3044248
Alignment:
Q  31 ctgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaatatcttatatacatattataaggtgtttc 128  Q
    ||||||||||||||  |||||  ||||||| || |||| ||||||||||||   ||||||||||||||| | |||||  |||| | ||||| ||||||    
T  3044345 ctgttttcatataatctataacctgttttcttatgctaacctggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagttgtttc 3044248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 28779313 - 28779374
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaag 65  Q
    |||||||  |||||| ||||||| ||||| |||||||||||  ||||||||||||| |||||    
T  28779313 tataacatcagatgaaataaagtcaaactattttcatataagctataagttgtttttgtaag 28779374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 54775082 - 54775158
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagag 78  Q
    |||||||||||||||| | ||||||| ||||  |||| |||| ||||||||| |||||||||||| || | |||||||    
T  54775082 ttctataacaaaagataaaataaagtcaaaccatttttatat-aattataagctgttttcgtaagttatcatggagag 54775158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 20192719 - 20192659
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaa 64  Q
    ||||||||||||| | ||||||| |||| ||||||||||||  |||||| |||||| ||||    
T  20192719 tataacaaaagataaaataaagtcaaacagttttcatataatctataagctgtttttgtaa 20192659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 25183101 - 25183037
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    ||||||||||||| | |||||||||| || ||||||||| |  |||||| ||||||| |||||||    
T  25183101 tataacaaaagattaaataaagttaagctattttcatatgagctataagctgttttcataagcta 25183037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 25699277 - 25699197
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||||| ||||||| ||| ||||| | |||||||||| || ||| ||||||||||||| |  |||||||| |||| |||||    
T  25699277 ttctattacaaaaggtgaaataaaataaaactgtttttatttaagttataagttgtttacacaagctagcttggaaagctt 25699197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 33965604 - 33965525
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaa--ttataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||||||| | | ||||||| ||||||||||||||||||   |||||| ||||||| ||||||| | || |||||||    
T  33965604 tataacaaaaggtaaaataaagtcaaactgttttcatataaaagctataagatgttttcataagctatcttgaagagctt 33965525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 51197848 - 51197793
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttc 60  Q
    ||||||||||||| | ||||||  ||| ||||||||||||| |||||||||||||||    
T  51197848 tataacaaaagat-agataaagacaaattgttttcatataagttataagttgttttc 51197793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 10192241 - 10192335
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagct-tgccaaaataagttgaaaa 99  Q
    |||||||||||||   ||||||| ||| ||||||||||||| |||||||||||||||  |||||| ||||||||||| ||  |||||||||||||||    
T  10192241 tataacaaaagatagaataaagtcaaattgttttcatataagttataagttgttttcaaaagctatcctggagagctatg--aaaataagttgaaaa 10192335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17884022 - 17884102
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||||||||||||||| | ||||||||||| ||||||  ||||| |||| |||||||||| |||||||   ||||||||||    
T  17884022 ttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagctt 17884102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 42321992 - 42321936
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttc 60  Q
    ||||||||| ||| | ||||||| ||| |||||||||||||||||||||||||||||    
T  42321992 tataacaaatgataaaataaagtcaaattgttttcatataaattataagttgttttc 42321936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 55870454 - 55870390
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    ||||||||||||| | ||||||| |||||||||||| ||||  |||||||||||||| |||||||    
T  55870454 tataacaaaagatcaaataaagtcaaactgttttcacataagctataagttgttttcataagcta 55870390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 2996531 - 2996625
Alignment:
Q  5 ataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    |||||| ||||| | ||| ||| ||| |||||| |||||| ||||||||||||||| ||||||| | |||||||| |   |||||||||||||||    
T  2996531 ataacataagataaaatacagtcaaattgtttttatataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaa 2996625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 24160611 - 24160545
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagct 67  Q
    |||||||||||||||| ||||||| | ||||| ||||||| |||  |||||||||||||| ||||||    
T  24160611 ttctataacaaaagataatataaattcaaactattttcatgtaagctataagttgttttcataagct 24160545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 927437 - 927510
Alignment:
Q  8 acaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||||||| ||||||| |||||||||||||||||  ||||| |||||| | ||||||| | |||| |||||    
T  927437 acaaaagatgaaataaagtcaaactgttttcatataagctataacttgtttgcataagctatcatggaaagctt 927510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 49085946 - 49086023
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||||||||| | |||| || ||||| |||||||| || ||||||||||||||| ||||||| | | ||||||||    
T  49085946 tataacaaaagataaaataatgtcaaactattttcatacaagttataagttgttttcataagctaccttagagagctt 49086023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 437545 - 437481
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    |||| |||||||| | ||||||||||| ||| ||||||||| || |||||||||||| |||||||    
T  437545 tatagcaaaagataaaataaagttaaattgtgttcatataagttttaagttgttttcataagcta 437481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 29263343 - 29263451
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaatatcttatatacatattata 119  Q
    ||||||||| | |||||||| ||||   ||||||||||||| ||||||| |||| ||||||||   ||||||| |||||| | |||||  |||||| |||    
T  29263343 ataaagttacattgttttcaaataagcgataagttgttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaacatatcata 29263442  T
Q  120 aggtgtttc 128  Q
    || ||||||    
T  29263443 agctgtttc 29263451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 52735076 - 52735156
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||| ||||||||||| | ||||||| ||| |  |||||||||| ||||| ||||||||||||||||| | || |||||||    
T  52735076 ttctgtaacaaaagataaaataaagtcaaattactttcatataagttatatgttgttttcgtaagctatcttgaagagctt 52735156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 24929447 - 24929506
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttc 60  Q
    |||||||||||||||| | |||||||  ||||||||||||| ||  ||||||||||||||    
T  24929447 ttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttc 24929506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 30207686 - 30207620
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    ||||||||||||| || | ||||| | |||||||||||||||||  |||||||||||||| |||||||    
T  30207686 ttctataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttgttttcataagcta 30207620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30338708 - 30338665
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataa 44  Q
    ||||||||||||||||   |||||||||||||||||||||||||    
T  30338708 ttctataacaaaagatagaataaagttaaactgttttcatataa 30338665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 46247178 - 46247225
Alignment:
Q  7 aacaaaagatgatataaagttaaactgttttcatataaattataagtt 54  Q
    |||||||||| | ||||||| |||||||||| ||||||||||||||||    
T  46247178 aacaaaagataaaataaagtcaaactgtttttatataaattataagtt 46247225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 5219615 - 5219565
Alignment:
Q  2 tctataacaaaagatgatataaagttaaactgttttcatataaattataag 52  Q
    ||||||| ||||||| | ||||||||||||| ||||||||||||| |||||    
T  5219615 tctataataaaagataaaataaagttaaactattttcatataaataataag 5219565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 16494875 - 16494802
Alignment:
Q  47 tataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaatatcttatatacatattataa 120  Q
    |||||||||||||| ||||||| | |||||||||||  ||| ||||||||||| | |||| | |||| ||||||    
T  16494875 tataagttgttttcataagctatcttggagagcttgtaaaactaagttgaaaacaacttagaaacatcttataa 16494802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 26520345 - 26520308
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttc 38  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  26520345 ttctataacaaaagatgaaataaagttaaattgttttc 26520308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 31034655 - 31034740
Alignment:
Q  10 aaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttg 95  Q
    ||||||| | |||| |||||||||||||||||||| |||  |||||||||  | | ||| | |||||||||| | |||||||||||    
T  31034655 aaaagattaaataatgttaaactgttttcatataagttaacagttgttttgatgaactaacatggagagctttcgaaaataagttg 31034740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 42866049 - 42866102
Alignment:
Q  28 aaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||||||||| ||||||  |||||||||||||| ||||||| ||| ||||||||    
T  42866049 aaactgtttttatataagctataagttgttttcataagctatccttgagagctt 42866102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 46415881 - 46415828
Alignment:
Q  28 aaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||||||||||||| || ||||||||| ||||| ||||||| ||| ||||||||    
T  46415881 aaactgttttcatacaagttataagttcttttcataagctatcctcgagagctt 46415828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 53626730 - 53626795
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagc 66  Q
    |||||||||||||||| | ||||| | ||| |||||||||||||  |||||| ||||||| |||||    
T  53626730 ttctataacaaaagataaaataaattcaaaatgttttcatataagctataagctgttttcataagc 53626795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 54325153 - 54325076
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagag 78  Q
    |||||| ||||||||| | ||||||| |||||||||||||||||  |||||| | |||||  |||||| | |||||||    
T  54325153 ttctattacaaaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagag 54325076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4071836 - 4071892
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgtt 57  Q
    |||||||||||||||| | ||||||| ||| | |||||||||||  |||||||||||    
T  4071836 ttctataacaaaagataaaataaagtcaaattattttcatataagctataagttgtt 4071892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 6927590 - 6927550
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttc 60  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  6927590 ataaagttaaattgttttcatgtaaactataagttgttttc 6927550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11389480 - 11389532
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagt 53  Q
    |||||||| ||||||| |  ||||||||||||||||| ||||||| |||||||    
T  11389480 ttctataaaaaaagataaagtaaagttaaactgttttaatataaactataagt 11389532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 22471312 - 22471344
Alignment:
Q  28 aaactgttttcatataaattataagttgttttc 60  Q
    ||||||||||||||||| |||||||||||||||    
T  22471312 aaactgttttcatataagttataagttgttttc 22471344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25885813 - 25885877
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaag 65  Q
    ||||||| |||||||| | ||||||||||| ||||||| | |||  |||||||||||||| ||||    
T  25885813 ttctatagcaaaagataaaataaagttaaattgttttcgtgtaagctataagttgttttcataag 25885877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 27721717 - 27721769
Alignment:
Q  47 tataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    |||||| ||||||| |||| || |||||||||||||| |||||||| ||||||    
T  27721717 tataagctgttttcataagttatcctggagagcttgcgaaaataagctgaaaa 27721769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 36722757 - 36722705
Alignment:
Q  29 aactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||||||||||||||| ||||||||||||||  |||| || |||| |||||||    
T  36722757 aactgttttcatataagttataagttgttttgataagttatcctgaagagctt 36722705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 1402950 - 1403026
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggaga 77  Q
    |||||||||||||||| | ||||||||||||| |||||||||||  ||||| |||||||| ||||||| | ||||||    
T  1402950 ttctataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcataagctatcatggaga 1403026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 3785808 - 3785736
Alignment:
Q  9 caaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||||||| | ||||||||||||||||||| |||||  |||||| |||||| ||||||||  |||||||||||    
T  3785808 caaaagataaaataaagttaaactgttttcgtataagctataagctgtttttgtaagctattctggagagctt 3785736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4006668 - 4006774
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaat 100  Q
    |||||||||||| ||| | ||||||| ||| |||||| ||||||  |||||||||||||| ||||||| ||  ||||| ||   |||||||| |||||||    
T  4006668 ttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccctgagaggttatgaaaataagctgaaaat 4006767  T
Q  101 atcttat 107  Q
    | |||||    
T  4006768 aacttat 4006774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 24836315 - 24836238
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||||||||||||||| | ||||||| ||| ||||||| |||||| |||||   |||||||||||||| | ||||||||||    
T  24836315 ttctataacaaaagataaaataaagtcaaattgttttcgtataaactataa---gttttcgtaagctatcatggagagctt 24836238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 28660873 - 28660817
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttc 60  Q
    |||||||| |||| | ||||||||||| | |||||||||||||||||| ||||||||    
T  28660873 tataacaatagataaaataaagttaaattattttcatataaattataaattgttttc 28660817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 2455893 - 2455956
Alignment:
Q  134 ataagctctccgaaacacgctcacaagtgcttatgccggtaaataagcgtaaataagtcaattc 197  Q
    ||||||||| | |||||  ||| |||||||||||||||||| ||||||  ||||||||||||||    
T  2455893 ataagctcttctaaacaatctcgcaagtgcttatgccggtagataagctcaaataagtcaattc 2455956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 2027519 - 2027453
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagc 70  Q
    ||||||||||||| | ||||||| ||||| |||||||||||  |||||| |||| || |||||||||    
T  2027519 tataacaaaagataaaataaagtcaaactattttcatataacctataagctgttctcataagctagc 2027453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6310340 - 6310282
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgtttt 59  Q
    ||||||||||||||||||  ||||||  || |||||||||||||  |||||||||||||    
T  6310340 ttctataacaaaagatgaagtaaagtctaattgttttcatataagctataagttgtttt 6310282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 8035236 - 8035166
Alignment:
Q  29 aactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    ||||||||||||||||  || ||||||||||| |||| || ||| || ||||| | |||||||||||||||    
T  8035236 aactgttttcatataagctagaagttgttttcataagttatcctagaaagcttacgaaaataagttgaaaa 8035166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9093672 - 9093606
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagct 67  Q
    ||||||| |||||||| | ||||||||||| ||||||| |||||  |||||| ||||||| ||||||    
T  9093672 ttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagct 9093606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 281962 - 281885
Alignment:
Q  3 ctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagct 80  Q
    |||||||||||||| | ||||||| ||  |||||||||||||  |||||| ||| ||| ||||||| ||| |||||||    
T  281962 ctataacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagct 281885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5328928 - 5329004
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagag 78  Q
    |||||||||||||||| | ||||||| ||||  |||| |||| ||||||||| |||||||||||| || | |||||||    
T  5328928 ttctataacaaaagataaaataaagtcaaaccatttttatat-aattataagctgttttcgtaagttatcatggagag 5329004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 8420294 - 8420213
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaata 101  Q
    ||||||| ||||||| || ||||||| |||||| |||| ||||||||||   ||||||||||    ||||||||||||||||    
T  8420294 ataaagtcaaactgtgtttatataaaatataagctgttctcgtaagctataatggagagcttatggaaataagttgaaaata 8420213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 31671169 - 31671092
Alignment:
Q  22 aaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    ||||||||| |||||||||||||  |||||| ||||||||||| ||| ||| || |||||   |||||||| ||||||    
T  31671169 aaagttaaattgttttcatataagctataagctgttttcgtaaactatcctagatagcttatgaaaataagctgaaaa 31671092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2117357 - 2117437
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||||| ||||| ||| | | ||||| ||||| |||||||||||  |||||||||||||| |||| || ||| ||||||||    
T  2117357 ttctatgacaaaggataaaacaaagtcaaactattttcatataatctataagttgttttcataagttatcctagagagctt 2117437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4247177 - 4247113
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaag 65  Q
    |||||||||||||||| | ||| ||||   |||||||||||||| ||||||| ||||||| ||||    
T  4247177 ttctataacaaaagataaaatagagttggtctgttttcatataagttataagctgttttcataag 4247113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 25100005 - 25100097
Alignment:
Q  9 caaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaata 101  Q
    ||||| |||| ||| ||| ||| |||||||||| || ||||||||||||||| ||||||| | |  |||||||    ||||||||||||||||    
T  25100005 caaaatatgaaatagagtcaaattgttttcatagaagttataagttgttttcataagctatcttaaagagcttatagaaataagttgaaaata 25100097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 33787861 - 33787781
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||||||||| || | | ||||| ||| || |||||||||| ||||||| ||||||| |||| || | ||||||||||    
T  33787861 ttctataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatcttggagagctt 33787781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 1625868 - 1625960
Alignment:
Q  15 atgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaatatcttat 107  Q
    |||| ||||||||||| ||||||| ||||| ||||||||||||||| ||||||| | |||||| ||| | ||||| || |||||| |||||||    
T  1625868 atgaaataaagttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttat 1625960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3673761 - 3673843
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgc 83  Q
    ||||||||||||| || | ||||||||||| ||||||||||||| ||||||||| ||||| | ||||| | || |||||||||    
T  3673761 ttctataacaaaatataaaataaagttaaattgttttcatataagttataagtttttttcattagctatcttgaagagcttgc 3673843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 11513858 - 11513959
Alignment:
Q  7 aacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaatatctta 106  Q
    |||||||||| | ||||||| ||| |||||||||||||  |||||||||||||| ||||||| | |||||| |||    ||||||| |||||||| ||||    
T  11513858 aacaaaagataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaaaatagctta 11513957  T
Q  107 ta 108  Q
    ||    
T  11513958 ta 11513959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 18066091 - 18066188
Alignment:
Q  10 aaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaatatcttat 107  Q
    |||| |||| ||||||||||| |||||||||||||  |||||| ||||||| ||||||| | |||||| |||   |||||||| |||||||| |||||    
T  18066091 aaaatatgaaataaagttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaatagcttat 18066188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 28803618 - 28803542
Alignment:
Q  5 ataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||||||||||| | ||||||| |||||| ||||||||||  || ||||||||||| ||| ||| ||||||||||||    
T  28803618 ataacaaaagataaaataaagtcaaactgatttcatataagctacaagttgttttcttaaactatcctggagagctt 28803542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30537643 - 30537563
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||||| |||||| ||||||||| |||| ||||||||||||  |||||| | || ||||||||||  |||||||||||    
T  30537643 ttctataactaaagatcatataaagtcaaacagttttcatataagctataagctattctcgtaagctattctggagagctt 30537563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 37276722 - 37276778
Alignment:
Q  23 aagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagc 79  Q
    |||| ||||||||||||||||| ||||||||||||||| |||| || ||||||||||    
T  37276722 aagtcaaactgttttcatataagttataagttgttttcataagttatcctggagagc 37276778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 14666506 - 14666561
Alignment:
Q  5 ataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttc 60  Q
    |||||||||||| | ||||||| |||||| |||||||||| |||||||||||||||    
T  14666506 ataacaaaagataaaataaagtcaaactgatttcatataagttataagttgttttc 14666561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 17952817 - 17952742
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggag 76  Q
    |||||||||||||||| | ||||||| ||||| |||||||||||  || ||| ||||||| ||||||| |||||||    
T  17952817 ttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagctatcctggag 17952742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 37292457 - 37292386
Alignment:
Q  7 aacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagag 78  Q
    |||||||||| | ||||||| ||||| |||||||||||  ||| |||||||||| ||||||| |||||||||    
T  37292457 aacaaaagataaaataaagtaaaactattttcatataagctattagttgttttcttaagctatcctggagag 37292386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10563674 - 10563568
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaat 100  Q
    ||||||||||||||||  |||| ||| ||| ||||||  | ||| ||||||||||||||| |||||||  ||| |||||||   |||||||| |||||||    
T  10563674 ttctataacaaaagatagtatatagtgaaattgtttttttgtaagttataagttgttttcataagctatgctgaagagcttaagaaaataagctgaaaat 10563575  T
Q  101 atcttat 107  Q
    | |||||    
T  10563574 agcttat 10563568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 18962151 - 18962077
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagag 78  Q
    ||||||||||||| | |||||||||||||||||||||||||  |||||  | ||||| ||||||| | |||||||    
T  18962151 tataacaaaagataaaataaagttaaactgttttcatataagctataaactattttcataagctatcatggagag 18962077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10143126 - 10143203
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagag 78  Q
    |||||||||||||||| | || |||| |||||||||| ||||||  |||||||| ||||| ||||||| | |||||||    
T  10143126 ttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatcatggagag 10143203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33256694 - 33256759
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagc 66  Q
    ||||||||||| |||| | ||||||| |||||||||||||||||| ||||||  |||||| |||||    
T  33256694 ttctataacaatagataaaataaagtcaaactgttttcatataaactataagcagttttcataagc 33256759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 15780034 - 15780111
Alignment:
Q  2 tctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||||||||||| | |||||  ||||| ||||||||||||  |||||||||||||| ||||||| | || |||||||    
T  15780034 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagctt 15780111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 5133726 - 5133785
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttc 60  Q
    |||||||||||||||| | |||||| ||||||||||| ||||||  |||||| |||||||    
T  5133726 ttctataacaaaagataaaataaagataaactgtttttatataagatataagctgttttc 5133785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15377719 - 15377786
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    ||||||| |||| ||| | ||||||||| | ||||||||||||| ||||||| ||||||| |||||||    
T  15377719 ttctataccaaaggataaaataaagttagattgttttcatataagttataagctgttttcataagcta 15377786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 36863732 - 36863641
Alignment:
Q  10 aaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaata 101  Q
    ||||||| | ||||||| ||||  |||| |||||| |||||| |||||||| ||||||| | ||||||||||   ||||||||||| |||||    
T  36863732 aaaagataaaataaagtcaaacaatttttatataagttataaattgttttcataagctatcttggagagcttatgaaaataagttggaaata 36863641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37053548 - 37053607
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttc 60  Q
    |||||||||| || || | ||||||| ||||||||||||||||| ||||||||| |||||    
T  37053548 ttctataacagaaaataaaataaagtcaaactgttttcatataagttataagtttttttc 37053607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 39983329 - 39983408
Alignment:
Q  34 ttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaatatcttatatacat 113  Q
    |||||||||||  |||||||||||||| ||||||| |||||||||||    |||||||  |||||||| |||||| ||||    
T  39983329 ttttcatataagctataagttgttttcataagctatcctggagagctaatgaaaataaactgaaaatagcttatagacat 39983408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 43985086 - 43985019
Alignment:
Q  34 ttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaata 101  Q
    ||||| ||||||||||||||||||||| ||||||| | || |||||||   |||||||| ||||||||    
T  43985086 ttttcgtataaattataagttgttttcataagctatcttgaagagcttatgaaaataagctgaaaata 43985019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 9477945 - 9478003
Alignment:
Q  40 tataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaa 98  Q
    ||||| ||||||||||||||| ||||||| ||||||||| ||   ||||||||||||||    
T  9477945 tataagttataagttgttttcataagctatcctggagaggttatgaaaataagttgaaa 9478003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 13630389 - 13630299
Alignment:
Q  9 caaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    |||||||| | ||||||| |||||||||||||||||   ||||||||||||| ||| ||| ||| ||||| ||   | |||||||||||||    
T  13630389 caaaagataagataaagtcaaactgttttcatataatcaataagttgttttcctaatctatccttgagagtttatgacaataagttgaaaa 13630299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33192147 - 33192197
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataa 51  Q
    |||||||||| ||||| | ||||||| ||||||||||||||||| ||||||    
T  33192147 ttctataacataagataaaataaagtcaaactgttttcatataagttataa 33192197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 5043666 - 5043609
Alignment:
Q  11 aaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    |||||| | ||||||| |||||||||||||||||  || ||||||||||| |||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagctagaagttgttttcataagcta 5043609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 6227708 - 6227785
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||||||||| | || || |||||| ||||| ||||||| ||||||| |||||| |||||||   ||||||||||    
T  6227708 tataacaaaagataaaattaaattaaaccgtttttatataaactataagtggttttcataagctattttggagagctt 6227785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 33942112 - 33942169
Alignment:
Q  9 caaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagc 66  Q
    |||||||| | ||||||| ||||||||||||| |||  |||||||||||||| |||||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataagttgttttcataagc 33942169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 43299516 - 43299451
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaat-tataagttgttttcgtaagcta 68  Q
    ||||||| ||||| | ||||||| ||||||||||  ||||||| |||||||||||||| |||||||    
T  43299516 tataacagaagataaaataaagtcaaactgtttttgtataaatctataagttgttttcataagcta 43299451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31740075 - 31740019
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgtt 57  Q
    ||||||||| |||||| | ||||||| ||||| |||||||||||  |||||||||||    
T  31740075 ttctataactaaagataaaataaagtcaaactattttcatataagctataagttgtt 31740019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 34055017 - 34054937
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||||||||||||||| | ||||||  ||||||||| ||||||   |||||| ||||||| ||||||| |||  |||||||    
T  34055017 ttctataacaaaagataaaataaaggcaaactgtttacatatatgatataaggtgttttcataagctatcctatagagctt 34054937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 43199368 - 43199448
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||| |||||||||| | ||||||||||| | | ||| |||||  |||||||||||||| ||| ||| |||||| |||||    
T  43199368 ttctacaacaaaagataaaataaagttaaattatcttcgtataagctataagttgttttcataaactatcctggacagctt 43199448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 26284892 - 26284793
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaatatcttatatacatattata 119  Q
    ||||||| |||||||||||||||||| || |||||||||||||||| || |||| | |||||   |||||||| |||||| | |||||| |||| |||||    
T  26284892 ataaagtcaaactgttttcatataaagtacaagttgttttcgtaagttatcctgtatagcttatgaaaataagctgaaaacaacttatagacatgttata 26284793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 7714197 - 7714294
Alignment:
Q  2 tctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    ||||||||||||||| | |||||| | | |||||||||||| || |||||||||||||| | ||||| | |||||||||    |||||||||||||||    
T  7714197 tctataacaaaagataaaataaaggtgagctgttttcatatcaactataagttgttttcatgagctatcttggagagctcatgaaaataagttgaaaa 7714294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 34551077 - 34551154
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||||||||| | || |||| ||| ||||||||| ||| ||||||||||||||| |||| || ||||||||||||    
T  34551077 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagctt 34551154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 25872515 - 25872471
Alignment:
Q  8 acaaaagatgatataaagttaaactgttttcatataaattataag 52  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||    
T  25872515 acaaaagatgatataaagtaaaactgttttcatataagttataag 25872471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 27728137 - 27728070
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    |||||||| ||||||| | ||||||| ||||| |||||||||||| ||| |||||||||| |||||||    
T  27728137 ttctataaaaaaagataaaataaagtcaaactattttcatataaagtattagttgttttcataagcta 27728070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 39551321 - 39551227
Alignment:
Q  5 ataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    |||| ||||||| | |||||| |||||||| |||||| ||  |||||||||||||| ||||||  ||||||||||||   |||||||||| ||||    
T  39551321 ataataaaagataaaataaagctaaactgtcttcatacaagctataagttgttttcataagctttcctggagagcttataaaaataagttaaaaa 39551227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 8799359 - 8799431
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctg 73  Q
    |||||||||||||||| | ||||||| ||||| ||| || |||||||||||| ||||||  ||||||| ||||    
T  8799359 ttctataacaaaagataaaataaagtcaaactatttccagataaattataaggtgtttttataagctatcctg 8799431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13561428 - 13561348
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||||||||| || || | ||||||| ||| |||||||||||||||||||| ||||||||  |||||| | | ||||||||    
T  13561428 ttctataacagaaaattaaataaagtcaaattgttttcatataaattataacttgttttcacaagctatcattgagagctt 13561348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13652169 - 13652249
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||| |||||||||  || |||| ||| ||||||||||||| |||||| |||||||  |||||||  |||||||||||    
T  13652169 ttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctattctggagagctt 13652249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13710812 - 13710892
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    ||||||| |||||||||  || |||| ||| ||||||||||||| |||||| |||||||  |||||||  |||||||||||    
T  13710812 ttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctattctggagagctt 13710892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 41336754 - 41336654
Alignment:
Q  8 acaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaatatcttat 107  Q
    ||||||||| | ||| ||| ||| |||||||||||||| || || |||||||| ||||||| |  |||||||||||  ||||||| |||||| | |||||    
T  41336754 acaaaagataaaatatagtcaaattgttttcatataaactagaacttgttttcataagctatctaggagagcttgcggaaataagctgaaaacaacttat 41336655  T
Q  108 a 108  Q
    |    
T  41336654 a 41336654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 6864556 - 6864477
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    ||||||| ||||| ||||||| ||| ||||||||||||||| |||||||   |||||||||||   ||||||| ||||||    
T  6864556 ataaagtcaaactattttcatgtaagttataagttgttttcataagctattttggagagcttgaggaaataagctgaaaa 6864477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 31915384 - 31915305
Alignment:
Q  2 tctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||||||||||||||   ||||||| ||| |||||||||| ||  |||||| ||| || |||||||| ||||||||||||    
T  31915384 tctataacaaaagatagaataaagtcaaattgttttcatacaaggtataagatgtctttgtaagctatcctggagagctt 31915305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 35453739 - 35453672
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    ||||| |||||||||| | |||||||||||||  |||||||||| ||||| ||||||||  |||||||    
T  35453739 ttctacaacaaaagataaaataaagttaaactagtttcatataagttataggttgtttttttaagcta 35453672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 38260507 - 38260550
Alignment:
Q  22 aaagttaaactgttttcatataaattataagttgttttcgtaag 65  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||    
T  38260507 aaagttaaactgttttcatttaagttataagttgttttcttaag 38260550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 43704473 - 43704430
Alignment:
Q  22 aaagttaaactgttttcatataaattataagttgttttcgtaag 65  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||    
T  43704473 aaagtcaaactgttttcatataaactataagttgttttcataag 43704430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10727151 - 10727209
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgtttt 59  Q
    ||||||| |||||||||| ||||| | ||| |||||||| |||| ||||||||||||||    
T  10727151 ttctatagcaaaagatgaaataaattcaaagtgttttcacataagttataagttgtttt 10727209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 11185208 - 11185302
Alignment:
Q  34 ttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaatatcttatatacatattataaggtgtttc 128  Q
    |||||| ||| |||||||||||||||||| ||||| | |||||||||     |||||||||||||| | |||||  |||| ||||||| ||||||    
T  11185208 ttttcaaatacattataagttgttttcgttagctatcatggagagctgatggaaataagttgaaaacaacttatgaacatgttataagatgtttc 11185302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 31862451 - 31862545
Alignment:
Q  5 ataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaa 99  Q
    |||||||||||| ||||||||| ||||| || || |||||  |||||| ||||||| |||| || ||| ||||||||   |||||||| ||||||    
T  31862451 ataacaaaagataatataaagtcaaactattctcgtataagctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaa 31862545  T

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Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 34770853 - 34770923
Alignment:
Q  8 acaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagag 78  Q
    ||||||||| | ||||||| ||| ||||||||| |||  |||||||||||||| ||||||| ||| |||||    
T  34770853 acaaaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctatcctagagag 34770923  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 26473835 - 26473742
Alignment:
Q  34 ttttcatataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaatatcttatatacatattataaggtgttt 127  Q
    ||||||||| | || |||||||||||| ||||||| ||| ||||||||   |||||||||| ||| || |||||| |||| | ||||| |||||    
T  26473835 ttttcatatgagttgtaagttgttttcataagctatcctagagagcttatgaaaataagttaaaactagcttatagacatgtcataagctgttt 26473742  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42597355 - 42597420
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagc 66  Q
    |||||||||||||||| | ||||||| ||| |||||||||  ||  |||||||||||||| |||||    
T  42597355 ttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataagc 42597420  T

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Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 1433556 - 1433604
Alignment:
Q  55 gttttcgtaagctagcctggagagcttgccaaaataagttgaaaatatc 103  Q
    |||||| ||||||| ||||||||||||   |||||||||||||||||||    
T  1433556 gttttcataagctatcctggagagcttatgaaaataagttgaaaatatc 1433604  T

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Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4558752 - 4558832
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctt 81  Q
    |||||||| ||||||| | ||||||||||| | ||||||||||   |||||| ||||| | ||||||| ||| ||||||||    
T  4558752 ttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcctagagagctt 4558832  T

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Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 10222882 - 10222834
Alignment:
Q  20 ataaagttaaactgttttcatataaattataagttgttttcgtaagcta 68  Q
    |||||||  ||||| ||||||||||| ||||||||||| ||||||||||    
T  10222882 ataaagtagaactggtttcatataaactataagttgttatcgtaagcta 10222834  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27120024 - 27119984
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcata 41  Q
    |||||||||||| ||| | ||||||||||||||||||||||    
T  27120024 ttctataacaaacgataacataaagttaaactgttttcata 27119984  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 35298589 - 35298493
Alignment:
Q  6 taacaaaagatgatataaagttaaactgttttca-tataaattataagttgttttcgtaagctagcctggagagcttgccaaaataagttgaaaata 101  Q
    ||||||||||| | ||||||  |||| ||||||| |||||| |||||||||||||| ||||||| | ||| |||| | |  ||||||| ||||||||    
T  35298589 taacaaaagataaaataaagccaaacagttttcaatataaactataagttgttttcataagctatcatggtgagcctacataaataagctgaaaata 35298493  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 39561626 - 39561590
Alignment:
Q  32 tgttttcatataaattataagttgttttcgtaagcta 68  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  39561626 tgttttcatctaaactataagttgttttcgtaagcta 39561590  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 42237535 - 42237495
Alignment:
Q  4 tataacaaaagatgatataaagttaaactgttttcatataa 44  Q
    ||||||||||||| | ||||||||||| |||||||||||||    
T  42237535 tataacaaaagataaaataaagttaaattgttttcatataa 42237495  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27530 - 27589
Alignment:
Q  1 ttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttc 60  Q
    |||||||||| ||||| | ||||||| ||| |||||||||||||| ||||||||||||||    
T  27530 ttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttc 27589  T

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