View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17463_low_11 (Length: 239)
Name: NF17463_low_11
Description: NF17463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17463_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 8484081 - 8483856
Alignment:
| Q |
1 |
tattgagttcaacggagatgtaaaggtaagtaaaaccttaccaatatttatatatgatttgaattctgatcctctt-gaattacttcgtcattcgagctc |
99 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| |
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| T |
8484081 |
tattgagttcaacggagatgtaaaggtaagtaaaaccttaccaatatttatatatgatttgaattctgatcctctttgaataacttggtcattcgagctc |
8483982 |
T |
|
| Q |
100 |
actataaatgtaccaaatccaccaatttaatccatacgtttcatcttatttcttaaactctaaaaagcttaactcataaccacatggactcatctttcat |
199 |
Q |
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|
||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8483981 |
actataaatgtaccaaatccaccaatttaatacatacgtttcatctcatttcttaaactctaaaaagcttaactcataaccacatggactcatctttcat |
8483882 |
T |
|
| Q |
200 |
aatggtacaagatatattagctttat |
225 |
Q |
| |
|
|||||||||||||||||||||||||| |
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| T |
8483881 |
aatggtacaagatatattagctttat |
8483856 |
T |
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