View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17463_low_3 (Length: 616)
Name: NF17463_low_3
Description: NF17463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17463_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 512; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 512; E-Value: 0
Query Start/End: Original strand, 15 - 602
Target Start/End: Original strand, 9495901 - 9496492
Alignment:
| Q |
15 |
aagggaacaattcatatatttacagagttttctttcctatagggtttatgtctccatttttaaggatctatggtggttatcctagaattaccaatgtgat |
114 |
Q |
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| T |
9495901 |
aagggaacaattcatatatttacagagttttctctcctatagggtttatgtctccatttttaaggatctatggtggttatcctagaattaccaatgtgaa |
9496000 |
T |
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| Q |
115 |
caactccctttattgattggttcaagtacggttcaaatttaacaattttcttttttatctaaggtgctttggcttgatgttaacaacctctatagaaaat |
214 |
Q |
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| T |
9496001 |
caactccctttattgattggttcaagtacggttcaaatttaacaattttctttttta----aggtgctttggcttgatgttaacaacctctatagaaaat |
9496096 |
T |
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| Q |
215 |
aggattacttcctttaggattgaaaaaatgagtgtcattggttagaattgcttcggattcggtaactcaa----gcgcagttcctaatataaaatacctc |
310 |
Q |
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| T |
9496097 |
aggattacttcctttaggattgaaaaaatgagtgtcattggttagaactgcttcgggttcggtaactcgatcgagcgcagttcctaatataaaatacctc |
9496196 |
T |
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| Q |
311 |
gtccgacactttaatatgaatcttctcttcttaagcaaaacattagttcaaatgaataa--ttgaagatttacattatgtgctcgactttgattcttatt |
408 |
Q |
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| T |
9496197 |
gtccgacactttaatatgaatcttctcttcttaagcaaaacattagttcaaatgaataagattgaagatttacattatgtgctcgactttgattcttatt |
9496296 |
T |
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| Q |
409 |
tttctgttgaccgtaccgatagaggggacaatcttgctttgtttttgcgtactacttttaattgtcaaattgtcaatttctctaataatcatggtaatgt |
508 |
Q |
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| T |
9496297 |
tttctgttgaccgtaccgatagaggggacaatcttgctttgtttttgcgtactacttttaattgtcaaattgtcaatttctctaataatcatggtaatgt |
9496396 |
T |
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| Q |
509 |
tgatattgttgatactacttctgtttgtggaaacttaccagctactagggttaccctaat--gggacataggcgagctgcgtgggatttccttctt |
602 |
Q |
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| T |
9496397 |
tgatattgttgatactacttctgtttgtggaaacttaccagctactacggttaccctaatgggggacataggcgagctacgtgggatttccttctt |
9496492 |
T |
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