View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17464_high_18 (Length: 314)
Name: NF17464_high_18
Description: NF17464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17464_high_18 |
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Alignment Details
Target: chr1 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 6966675 - 6966365
Alignment:
| Q |
1 |
atgatgctagaatcaagagcaagggtataagctccaacatcaagtatattgtggtttatttatttttcagaaaaattactaatgttgttttgattatgct |
100 |
Q |
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| T |
6966675 |
atgatgctagaatcaagagcaagggtataagctccaacatcaagtatattgtggtttatttatttttcagaaaaattactaatgttgttttgattatgct |
6966576 |
T |
|
| Q |
101 |
tagactcactaatattgtgatcaatttatacaagactttggacacataattatggtattaattagtagtatatgtatatgcaataatctctaggccaatt |
200 |
Q |
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| T |
6966575 |
tagactcactaatattgtgatcaatttatacaagactttggacacataattatggtattaattagtagtatatgtatatgcaataatctctaggccaatt |
6966476 |
T |
|
| Q |
201 |
tgagaagttcccaaaacaaagttgttatcataaatacaaggggctaaggtttcttatgccatcacgaaatacattagctgctcttggtttgttccactca |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6966475 |
tgagaagttcccaaaacaaagttgttatcataaatacaaggggctaaggtttcttatgccatcacgaaatacattagctgctcttggtttgttccactca |
6966376 |
T |
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| Q |
301 |
gaaccgatatt |
311 |
Q |
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| T |
6966375 |
gaaccgatatt |
6966365 |
T |
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