View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17464_low_48 (Length: 229)
Name: NF17464_low_48
Description: NF17464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17464_low_48 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 32951387 - 32951579
Alignment:
| Q |
18 |
aaattatattacgcgccaatcaaacattaaaggtagccctcaaccataatatcttgggtcaaggattacaagtcaaagaattagtttaaacttcaatttt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32951387 |
aaattatattacgcgccaatcaaacattaaaggtagccctcaaccataatatcttgggtcaaggattacaagtcaaagaattagtttaaacttcaatttt |
32951486 |
T |
|
| Q |
118 |
aagaatcaacgtacgaagatatacaaatctatttgctctatatattcaaacaatgatatcaaatgataaaccataaaggaactttgtattattc |
211 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32951487 |
aagaatcaacgtacgaagatatacaaatcta-ttgctctatatattcaaacaatgatatcaaatgataaaccataaaggaactttgtattattc |
32951579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University