View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17464_low_6 (Length: 475)

Name: NF17464_low_6
Description: NF17464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17464_low_6
NF17464_low_6
[»] chr1 (38 HSPs)
chr1 (139-342)||(50316887-50317098)
chr1 (136-342)||(24438781-24438996)
chr1 (375-458)||(33983369-33983452)
chr1 (234-321)||(7655204-7655291)
chr1 (136-335)||(24437092-24437300)
chr1 (136-206)||(33983256-33983326)
chr1 (234-342)||(16673196-16673304)
chr1 (218-342)||(33981515-33981639)
chr1 (216-340)||(7185778-7185902)
chr1 (234-321)||(28920595-28920682)
chr1 (234-320)||(36146852-36146937)
chr1 (234-342)||(33257892-33257999)
chr1 (213-321)||(33259291-33259399)
chr1 (234-342)||(33278064-33278171)
chr1 (213-321)||(33279450-33279558)
chr1 (234-342)||(36145355-36145463)
chr1 (216-321)||(19057789-19057894)
chr1 (234-335)||(22684090-22684191)
chr1 (216-319)||(13211034-13211137)
chr1 (234-321)||(28919115-28919202)
chr1 (234-342)||(7653697-7653805)
chr1 (234-321)||(41668305-41668392)
chr1 (212-322)||(7184354-7184464)
chr1 (214-322)||(13209605-13209714)
chr1 (246-315)||(18309123-18309192)
chr1 (257-342)||(44268899-44268984)
chr1 (214-342)||(7001209-7001336)
chr1 (239-341)||(31321021-31321121)
chr1 (216-278)||(33981635-33981697)
chr1 (237-342)||(19251105-19251210)
chr1 (234-318)||(19249355-19249438)
chr1 (234-292)||(16672716-16672774)
chr1 (205-291)||(23080066-23080152)
chr1 (263-335)||(50315336-50315408)
chr1 (216-259)||(33485247-33485290)
chr1 (263-321)||(46604471-46604528)
chr1 (267-316)||(9627554-9627603)
chr1 (140-200)||(33981721-33981781)
[»] chr2 (34 HSPs)
chr2 (136-342)||(16142237-16142451)
chr2 (136-341)||(38729896-38730110)
chr2 (136-339)||(38728198-38728409)
chr2 (136-321)||(16143430-16143623)
chr2 (234-335)||(45499323-45499424)
chr2 (234-335)||(40303311-40303412)
chr2 (234-335)||(40304702-40304803)
chr2 (234-342)||(1840168-1840276)
chr2 (234-342)||(13947759-13947866)
chr2 (234-342)||(14088948-14089055)
chr2 (234-322)||(45492972-45493060)
chr2 (234-322)||(45500714-45500802)
chr2 (234-321)||(1841695-1841782)
chr2 (210-322)||(22053156-22053267)
chr2 (216-342)||(44465012-44465138)
chr2 (205-342)||(472731-472868)
chr2 (213-342)||(28563387-28563516)
chr2 (216-342)||(44463577-44463701)
chr2 (263-322)||(7317421-7317480)
chr2 (251-340)||(35588140-35588229)
chr2 (216-321)||(44421264-44421369)
chr2 (263-335)||(6844066-6844138)
chr2 (239-342)||(34591736-34591838)
chr2 (263-332)||(9660866-9660935)
chr2 (216-321)||(15346896-15347001)
chr2 (216-322)||(44097273-44097381)
chr2 (216-321)||(22060401-22060507)
chr2 (239-342)||(15348383-15348486)
chr2 (263-321)||(6842747-6842805)
chr2 (267-316)||(10345120-10345169)
chr2 (267-316)||(43518050-43518099)
chr2 (237-297)||(13948542-13948601)
chr2 (237-297)||(14089749-14089808)
chr2 (267-335)||(22060133-22060201)
[»] chr7 (33 HSPs)
chr7 (138-335)||(12180475-12180680)
chr7 (136-342)||(11671120-11671334)
chr7 (136-322)||(12178514-12178708)
chr7 (234-335)||(46245140-46245241)
chr7 (234-342)||(37131846-37131954)
chr7 (234-321)||(21716559-21716646)
chr7 (235-320)||(31392091-31392176)
chr7 (234-335)||(46246515-46246616)
chr7 (234-342)||(40028468-40028576)
chr7 (234-342)||(45277907-45278015)
chr7 (234-317)||(45276445-45276528)
chr7 (236-342)||(37133591-37133697)
chr7 (234-318)||(8231574-8231658)
chr7 (234-342)||(21715083-21715191)
chr7 (234-342)||(31393599-31393707)
chr7 (238-319)||(8230104-8230185)
chr7 (214-322)||(37348766-37348874)
chr7 (234-321)||(13420226-13420313)
chr7 (234-360)||(4675737-4675864)
chr7 (236-316)||(32881153-32881233)
chr7 (234-342)||(40029969-40030077)
chr7 (234-318)||(14774548-14774631)
chr7 (234-318)||(15225001-15225084)
chr7 (216-291)||(15135440-15135515)
chr7 (246-317)||(21017733-21017803)
chr7 (240-341)||(15136885-15136986)
chr7 (216-292)||(30792752-30792828)
chr7 (239-335)||(11669859-11669955)
chr7 (287-342)||(3704409-3704464)
chr7 (217-282)||(28687306-28687371)
chr7 (267-316)||(41593176-41593225)
chr7 (234-318)||(32882655-32882739)
chr7 (216-292)||(37350123-37350199)
[»] chr8 (21 HSPs)
chr8 (136-342)||(2552418-2552631)
chr8 (220-342)||(3157963-3158085)
chr8 (216-342)||(2552676-2552800)
chr8 (234-342)||(25264351-25264459)
chr8 (234-321)||(25265845-25265932)
chr8 (216-322)||(5461965-5462071)
chr8 (216-342)||(39885998-39886124)
chr8 (212-342)||(15279551-15279681)
chr8 (212-342)||(15459920-15460050)
chr8 (234-321)||(33295386-33295472)
chr8 (239-342)||(39884627-39884730)
chr8 (234-317)||(33293975-33294059)
chr8 (251-342)||(22714006-22714097)
chr8 (216-319)||(27166799-27166902)
chr8 (246-292)||(27824484-27824530)
chr8 (238-342)||(1650153-1650258)
chr8 (241-342)||(26719396-26719497)
chr8 (216-322)||(26720171-26720276)
chr8 (274-319)||(61080-61125)
chr8 (241-281)||(24893167-24893207)
chr8 (274-318)||(27339166-27339210)
[»] chr4 (36 HSPs)
chr4 (210-309)||(3068968-3069067)
chr4 (234-342)||(19994509-19994617)
chr4 (236-342)||(19995996-19996102)
chr4 (237-342)||(48713405-48713510)
chr4 (234-342)||(44251616-44251724)
chr4 (234-342)||(55948893-55949001)
chr4 (237-342)||(32082576-32082681)
chr4 (234-342)||(10337115-10337223)
chr4 (234-342)||(42977209-42977317)
chr4 (234-342)||(42978859-42978967)
chr4 (216-316)||(54121864-54121964)
chr4 (234-342)||(54534989-54535097)
chr4 (234-341)||(18597644-18597751)
chr4 (251-342)||(24919063-24919154)
chr4 (234-321)||(44253132-44253219)
chr4 (216-322)||(33607499-33607605)
chr4 (234-342)||(42889750-42889858)
chr4 (234-318)||(54123485-54123569)
chr4 (263-322)||(21354745-21354804)
chr4 (216-335)||(22307689-22307808)
chr4 (234-316)||(55947397-55947479)
chr4 (241-342)||(22309085-22309186)
chr4 (251-342)||(9561857-9561948)
chr4 (234-342)||(10338108-10338218)
chr4 (263-342)||(38157031-38157110)
chr4 (205-290)||(36887016-36887101)
chr4 (214-322)||(9563255-9563363)
chr4 (234-342)||(48711869-48711977)
chr4 (216-342)||(54536618-54536745)
chr4 (232-321)||(39654612-39654699)
chr4 (234-292)||(53355161-53355219)
chr4 (138-191)||(21354613-21354666)
chr4 (263-335)||(33609311-33609385)
chr4 (263-342)||(55017751-55017831)
chr4 (239-321)||(25351745-25351825)
chr4 (251-292)||(25350558-25350599)
[»] chr5 (25 HSPs)
chr5 (216-342)||(27756707-27756833)
chr5 (216-342)||(16310021-16310147)
chr5 (234-321)||(30333947-30334034)
chr5 (213-342)||(17554922-17555052)
chr5 (234-335)||(38624734-38624835)
chr5 (234-342)||(25916218-25916326)
chr5 (216-342)||(16308576-16308703)
chr5 (234-320)||(1418876-1418962)
chr5 (237-321)||(11772643-11772727)
chr5 (240-321)||(8872552-8872633)
chr5 (237-342)||(30332294-30332399)
chr5 (234-335)||(38626110-38626211)
chr5 (234-342)||(39103351-39103459)
chr5 (234-317)||(39101751-39101834)
chr5 (238-318)||(8874218-8874298)
chr5 (239-321)||(11771230-11771312)
chr5 (213-321)||(36619576-36619685)
chr5 (216-322)||(37498817-37498923)
chr5 (234-301)||(1417462-1417530)
chr5 (246-318)||(28803691-28803762)
chr5 (263-319)||(33084079-33084134)
chr5 (234-314)||(36621166-36621246)
chr5 (234-321)||(25914523-25914609)
chr5 (210-335)||(28592095-28592220)
chr5 (251-319)||(28804839-28804907)
[»] chr3 (19 HSPs)
chr3 (212-322)||(30700327-30700437)
chr3 (205-319)||(41879958-41880071)
chr3 (236-342)||(33734444-33734550)
chr3 (234-335)||(31796774-31796875)
chr3 (234-321)||(53528002-53528089)
chr3 (234-335)||(40499192-40499293)
chr3 (234-335)||(41081820-41081921)
chr3 (234-342)||(33732976-33733084)
chr3 (234-322)||(48568470-48568558)
chr3 (234-335)||(31795391-31795492)
chr3 (234-321)||(41083210-41083298)
chr3 (234-321)||(48567028-48567115)
chr3 (213-342)||(53529453-53529582)
chr3 (216-322)||(30701763-30701868)
chr3 (216-342)||(22942347-22942475)
chr3 (234-318)||(31656988-31657073)
chr3 (263-335)||(32558937-32559009)
chr3 (263-322)||(32613915-32613973)
chr3 (239-335)||(32615590-32615687)
[»] chr6 (15 HSPs)
chr6 (136-320)||(1443450-1443642)
chr6 (216-321)||(8752722-8752827)
chr6 (234-321)||(19084060-19084147)
chr6 (234-342)||(8745443-8745551)
chr6 (213-342)||(1256725-1256854)
chr6 (234-342)||(1258379-1258488)
chr6 (239-332)||(10699251-10699344)
chr6 (234-319)||(2956175-2956260)
chr6 (214-320)||(4296326-4296431)
chr6 (212-319)||(33469717-33469825)
chr6 (246-322)||(10699891-10699967)
chr6 (234-306)||(19082713-19082785)
chr6 (216-273)||(7678565-7678622)
chr6 (241-342)||(4496516-4496615)
chr6 (239-341)||(10707688-10707786)
[»] scaffold1176 (1 HSPs)
scaffold1176 (216-335)||(2069-2188)
[»] scaffold1118 (1 HSPs)
scaffold1118 (214-335)||(2430-2551)
[»] scaffold0633 (1 HSPs)
scaffold0633 (234-321)||(6834-6921)
[»] scaffold0489 (1 HSPs)
scaffold0489 (234-321)||(6755-6842)
[»] scaffold0280 (1 HSPs)
scaffold0280 (263-322)||(12162-12222)
[»] scaffold0672 (1 HSPs)
scaffold0672 (240-291)||(475-526)


Alignment Details
Target: chr1 (Bit Score: 119; Significance: 1e-60; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 139 - 342
Target Start/End: Original strand, 50316887 - 50317098
Alignment:
Q  139 ccctgtaatctttcctggaaggacacataagcatgttttgccaagtcaaacaacgccacgtcagccac--------acgtcagcatttttgtaacaaatg 230  Q
    |||| ||||||| | ||||||||||||||| | |||||||||| |||||||||||||||||||| |||        || ||||| ||||||||||| |||    
T  50316887 ccctataatcttgcgtggaaggacacataaacttgttttgccacgtcaaacaacgccacgtcagtcaccgttagacacatcagcgtttttgtaacagatg 50316986  T
Q  231 ctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacataca 330  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||| || ||||    
T  50316987 ctgacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaatcaaaaacacgcgaacttaca 50317086  T
Q  331 tggacgatttac 342  Q
    ||||||||||||    
T  50317087 tggacgatttac 50317098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 136 - 342
Target Start/End: Original strand, 24438781 - 24438996
Alignment:
Q  136 ggtccctgtaatctttcctggaaggacacataagcatgttttgccaagtcaaacaacgccacgtcagccac--------acgtcagcatttttgtaacaa 227  Q
    ||||| ||||||||| |||||||||||| |||||| |||||||||| |||||||||||||||||||| |||        || ||| | |||||||||||     
T  24438781 ggtccttgtaatcttgcctggaaggacaaataagcttgttttgccacgtcaaacaacgccacgtcagtcaccgttagacacatcaacgtttttgtaacag 24438880  T
Q  228 atgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaac-aaaaaacgatacaggaacgaaaaccaaaaacacgcggaca 326  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||| |      
T  24438881 atgctgacgggtgggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaaaagatacagggacgaaaaccaaaaacacgcgaatt 24438980  T
Q  327 tacatggacgatttac 342  Q
    |||| |||||||||||    
T  24438981 tacagggacgatttac 24438996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 375 - 458
Target Start/End: Original strand, 33983369 - 33983452
Alignment:
Q  375 aaataaataaataagcaaacaagaggatgatattcaaaatgaatcctcatgatcaagcagttaacaaacataaaagttgactta 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33983369 aaataaataaataagcaaacaagaggatgatattcaaaatgaatcctcatgatcaagcagttaacaaacataaaagttgactta 33983452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 7655204 - 7655291
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||||||||||||||||||||| |||  |||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||    
T  7655204 acgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgc 7655291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 136 - 335
Target Start/End: Complemental strand, 24437300 - 24437092
Alignment:
Q  136 ggtccctgtaatctttcctggaaggacacataagcatgttttgccaagtcaaacaacgccacgtcagcc--------acacgtcagc-atttttgtaaca 226  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||| |||||| |||||        |||| ||| |  ||||| |||||    
T  24437300 ggtccctgtaatctttcctagaaggacacataagcctgttttgccacgtcaaacaatgccacgccagccaccattagacacatcaacgttttttttaaca 24437201  T
Q  227 aatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggaca 326  Q
    || | |||||  |||||| |||| ||||| |||   || ||||||||||||||||||||||||||| |||||||  |||||||| ||||||||||| ||     
T  24437200 aaagttaacgttagggactaaaaccaaaaagttaacaatttacagggtttgttttagaacaaaaaaagatacagtgacgaaaacaaaaaacacgcgaact 24437101  T
Q  327 tacatggac 335  Q
    |||| ||||    
T  24437100 tacagggac 24437092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 33983256 - 33983326
Alignment:
Q  136 ggtccctgtaatctttcctggaaggacacataagcatgttttgccaagtcaaacaacgccacgtcagccac 206  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33983256 ggtccctgtaatcttgcctggaaggacacataagcatgttttgccacgtcaaacaacgccacgtcagccac 33983326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 234 - 342
Target Start/End: Original strand, 16673196 - 16673304
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  ||||||| |||| |||||||||||||||||| |||||||| |||||||||||||||||||  |  |||| ||    
T  16673196 acgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgcaaaattacaggg 16673295  T
Q  334 acgatttac 342  Q
    |||||||||    
T  16673296 acgatttac 16673304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 33981639 - 33981515
Alignment:
Q  218 tttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaac 317  Q
    ||||||||| ||| | |||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||  |  ||||||||||||    
T  33981639 tttgtaacacatgttgacgggatggacgaaaatcaaaacgtttgtaacttacatgatttgttttagaacaaaaaaagatacagagaataaaaccaaaaac 33981540  T
Q  318 acgcggacatacatggacgatttac 342  Q
    || || || || | |||||||||||    
T  33981539 acacgaacttatagggacgatttac 33981515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 340
Target Start/End: Original strand, 7185778 - 7185902
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||| ||||| |||| |||||| |||| ||||| |||| ||||||||||||| |||||||||| |||||| |||||||| |||||||| ||||    
T  7185778 tttttgtaacagatgctgacggaagggaccaaaagcaaaatgtttataacttacagggtctgttttagaataaaaaaagatacagggacgaaaacaaaaa 7185877  T
Q  316 acacgcggacatacatggacgattt 340  Q
    ||| ||  || |||| |||||||||    
T  7185878 acatgcaaacttacaaggacgattt 7185902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 28920595 - 28920682
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||||||||||||||||||||| |||  |||||||||||| |||||||||||||||||| |||||||| || ||||| ||||||||||    
T  28920595 acgggagggacgaaaatcaaaaggttattaacttacaggggttgttttagaacaaaaaaagatacagggacaaaaacaaaaaacacgc 28920682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 320
Target Start/End: Original strand, 36146852 - 36146937
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacg 320  Q
    |||||||||||||||||||||| |||  ||||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||    
T  36146852 acgggagggacgaaaatcaaaaagttattaacttacatggattgttttagaacaaaaaaagatacagg-acgaaaaccaaaaacacg 36146937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 33257999 - 33257892
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  |||||||||||||| |||||||||||||||| |||||| | || ||||||||||||||||  |  |||| ||    
T  33257999 acgggagggacgaaaatcaaaaagttattaacttacagggtt-gttttagaacaaaaaaagatacaaggacaaaaaccaaaaacacgccaaattacaggg 33257901  T
Q  334 acgatttac 342  Q
    |||||||||    
T  33257900 acgatttac 33257892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 33259291 - 33259399
Alignment:
Q  213 gcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaacca 312  Q
    |||||||||||||  | | | ||||||||||||||||| |||| |||  ||||||| |||| |||||||| ||||||||| |||||||| ||||||||||    
T  33259291 gcatttttgtaacggaagttgacgggagggacgaaaattaaaaagttattaacttataggggttgttttaaaacaaaaaaagatacagggacgaaaacca 33259390  T
Q  313 aaaacacgc 321  Q
    |||||||||    
T  33259391 aaaacacgc 33259399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 33278171 - 33278064
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  |||||||||||||| |||||||||||||||| |||||| | || ||||||||||||||||  |  |||| ||    
T  33278171 acgggagggacgaaaatcaaaaagttattaacttacagggtt-gttttagaacaaaaaaagatacaaggacaaaaaccaaaaacacgccaaattacaggg 33278073  T
Q  334 acgatttac 342  Q
    |||||||||    
T  33278072 acgatttac 33278064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 33279450 - 33279558
Alignment:
Q  213 gcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaacca 312  Q
    |||||||||||||  | | | ||||||||||||||||| |||| |||  ||||||| |||| |||||||| ||||||||| |||||||| ||||||||||    
T  33279450 gcatttttgtaacggaagttgacgggagggacgaaaattaaaaagttattaacttataggggttgttttaaaacaaaaaaagatacagggacgaaaacca 33279549  T
Q  313 aaaacacgc 321  Q
    |||||||||    
T  33279550 aaaacacgc 33279558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 36145463 - 36145355
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  ||||||| |||| |||||||||||||||||| |||||||| |||||||| ||||| ||||  |  |||| ||    
T  36145463 acgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacgaaaacaaaaaatacgccaaattacaggg 36145364  T
Q  334 acgatttac 342  Q
    |||||||||    
T  36145363 acgatttac 36145355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 321
Target Start/End: Original strand, 19057789 - 19057894
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||| | | | |||| |||||||||||| |||| |||  ||||||| |||| |||||||||||||||||| |||||| |||||||||| ||||    
T  19057789 tttttgtaacagaagttgacggaagggacgaaaataaaaaagttattaacttataggggttgttttagaacaaaaaaagatacatgaacgaaaactaaaa 19057888  T
Q  316 acacgc 321  Q
    ||||||    
T  19057889 acacgc 19057894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 335
Target Start/End: Original strand, 22684090 - 22684191
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||| |||||||||| |||||| |||   || ||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| || |||| ||    
T  22684090 acggtagggacgaaattcaaaaagttatcaatttacagggtttgttttagaacaaaaaaagatacatggacgaaaaccaaaaacacgcgaacttacaagg 22684189  T
Q  334 ac 335  Q
    ||    
T  22684190 ac 22684191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 319
Target Start/End: Original strand, 13211034 - 13211137
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||  ||| | |||| |||||  |||| |||||| ||| ||||||||||||| ||||||||||||||||  |||||||| |||||||||||||    
T  13211034 tttttgtaacggatgatgacggcagggaataaaagcaaaacatttataacttacagggtctgttttagaacaaaaagagatacagggacgaaaaccaaaa 13211133  T
Q  316 acac 319  Q
    ||||    
T  13211134 acac 13211137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 28919202 - 28919115
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||| ||||||||||||||||| |||  ||||||| |||| |||||||||||||||||| |||||||| | ||||| |||||||||||    
T  28919202 acggaagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggatgaaaatcaaaaacacgc 28919115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 7653805 - 7653697
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    ||||||||||| |||||||||| |||  ||||||| ||||  ||||||||||||||||| |||||||| |||||||| ||||| ||||  |  |||| ||    
T  7653805 acgggagggacaaaaatcaaaaagttattaacttataggggctgttttagaacaaaaaaagatacagggacgaaaacaaaaaatacgccaaattacaggg 7653706  T
Q  334 acgatttac 342  Q
    |||||||||    
T  7653705 acgatttac 7653697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 41668392 - 41668305
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    ||||||| |||||||| ||||| |||  |||||||||| | ||||||||||||||||||  ||||||  |||||||||||||||||||    
T  41668392 acgggagagacgaaaagcaaaaagttattaacttacagaggttgttttagaacaaaaaaatatacagagacgaaaaccaaaaacacgc 41668305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 7184464 - 7184354
Alignment:
Q  212 agcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaacc 311  Q
    ||||||||||||||| ||| | || | |||||| |||| || || | || ||| ||||||||| || |||||||||||||| |||||||  |||||||||    
T  7184464 agcatttttgtaacatatgatgaccgtagggaccaaaagcataaggcttataatttacagggtctgctttagaacaaaaaaagatacagagacgaaaacc 7184365  T
Q  312 aaaaacacgcg 322  Q
    |||||||||||    
T  7184364 aaaaacacgcg 7184354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 322
Target Start/End: Complemental strand, 13209714 - 13209605
Alignment:
Q  214 catttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaa-aaaacgatacaggaacgaaaacca 312  Q
    ||||||||||||| ||| | |||| |||||| |||| |||||||||| || |||||||||| | ||||||||||| |||| |||||| | |||||||  |    
T  13209714 catttttgtaacagatggtgacggcagggaccaaaagcaaaacgtttatatcttacagggtctattttagaacaaaaaaaagatacaaggacgaaaataa 13209615  T
Q  313 aaaacacgcg 322  Q
    ||||||||||    
T  13209614 aaaacacgcg 13209605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 18309192 - 18309123
Alignment:
Q  246 aaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    |||| |||||||||| ||||||||| || |||||||||||||||||| |||||||| ||||||| |||||    
T  18309192 aaaaccaaaacgtttataacttacaaggattgttttagaacaaaaaaagatacagggacgaaaatcaaaa 18309123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 342
Target Start/End: Complemental strand, 44268984 - 44268899
Alignment:
Q  257 gtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacgatttac 342  Q
    |||| ||||||||| ||| ||||||||||||||||| |||||||  |  ||||||||||||||||| || |||| |||||||||||    
T  44268984 gtttataacttacatggtctgttttagaacaaaaaaagatacagagataaaaaccaaaaacacgcgaacttacagggacgatttac 44268899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 214 - 342
Target Start/End: Complemental strand, 7001336 - 7001209
Alignment:
Q  214 catttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaa 313  Q
    ||||||||||| | ||| | |||  || ||| ||||| ||||||||| |||||||||  |||||||||||||||||||| |||||| ||| |||||| ||    
T  7001336 catttttgtaatagatgatgacgacagagaccaaaattaaaacgtttataacttacaatgtttgttttagaacaaaaaa-gatacatgaatgaaaacaaa 7001238  T
Q  314 aaacacgcggacatacatggacgatttac 342  Q
    ||||||  | || |||| |||||||||||    
T  7001237 aaacacatgaacttacaaggacgatttac 7001209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 341
Target Start/End: Complemental strand, 31321121 - 31321021
Alignment:
Q  239 agggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacgat 338  Q
    |||||| |||| ||||| |||||||  |||||||||||||||   ||||||||  |||||||| |||||||||||||||||||| || |||| ||| |||    
T  31321121 agggaccaaaagcaaaatgtttgtattttacagggtttgtttcgcaacaaaaa--gatacagggacgaaaaccaaaaacacgcgaacttacagggatgat 31321024  T
Q  339 tta 341  Q
    |||    
T  31321023 tta 31321021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 33981697 - 33981635
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgt 278  Q
    ||||||||| | ||||| |||||||| |||||||||||||||||||||||||| ||| |||||    
T  33981697 tttttgtaatagatgctgacgggaggtacgaaaatcaaaacgtttgtaacttagaggatttgt 33981635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 342
Target Start/End: Original strand, 19251105 - 19251210
Alignment:
Q  237 ggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacg 336  Q
    ||||||||||||| |||||  ||  ||| |||||||| |||||||||||||||||| |||| ||| || || || ||||||||||  | ||||| |||||    
T  19251105 ggagggacgaaaagcaaaaaattattaatttacaggggttgttttagaacaaaaaaagatatagggacaaacacaaaaaacacgcaaaaatacagggacg 19251204  T
Q  337 atttac 342  Q
    ||||||    
T  19251205 atttac 19251210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 318
Target Start/End: Complemental strand, 19249438 - 19249355
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaaca 318  Q
    |||| ||||||||||| ||||| |||  |||||||| ||| |||||||||||||||||| ||||||   ||||||||||||||||    
T  19249438 acggaagggacgaaaagcaaaa-gttattaacttaccggggttgttttagaacaaaaaaagatacaaagacgaaaaccaaaaaca 19249355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 16672774 - 16672716
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaa 292  Q
    |||||||||||| ||||||||| |||  ||||||| |||| ||||||||||||||||||    
T  16672774 acgggagggacggaaatcaaaaagttattaacttataggggttgttttagaacaaaaaa 16672716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 23080152 - 23080066
Alignment:
Q  205 acacgtcagcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaa 291  Q
    |||| ||||||||||||||||| ||| |||||| ||  |||||||| ||||| ||  ||||||| ||| |||||||||||| |||||    
T  23080152 acacatcagcatttttgtaacagatgttaacggaagatacgaaaatgaaaacattattaacttataggatttgttttagaaaaaaaa 23080066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 50315408 - 50315336
Alignment:
Q  263 aacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggac 335  Q
    ||||||||||||  ||||||||||||||||   |||||  |||||||||||||||||||| || |||| ||||    
T  50315408 aacttacagggtgagttttagaacaaaaaaacttacagagacgaaaaccaaaaacacgcgaacttacagggac 50315336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 33485247 - 33485290
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtt 259  Q
    ||||||||||| | |||||||||||||||||||| |||||||||    
T  33485247 tttttgtaacacaagctaacgggagggacgaaaagcaaaacgtt 33485290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 46604528 - 46604471
Alignment:
Q  263 aacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||||||||||||||| |||||| ||||||  ||||| | |||||||||||||||||||    
T  46604528 aacttacagggtttgtgttagaa-aaaaaaaaatacaaggacgaaaaccaaaaacacgc 46604471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 9627554 - 9627603
Alignment:
Q  267 tacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaa 316  Q
    |||||||||| |||||||||||||||   ||||||||||||||| |||||    
T  9627554 tacagggtttattttagaacaaaaaaacttacaggaacgaaaacaaaaaa 9627603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 33981781 - 33981721
Alignment:
Q  140 cctgtaatctttcctggaaggacacataagcatgttttgccaagtcaaacaacgccacgtc 200  Q
    ||||||||||| |||| |||||||||||||  ||| ||||||  ||||||||||||| |||    
T  33981781 cctgtaatcttgcctgaaaggacacataagtctgtgttgccacatcaaacaacgccatgtc 33981721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 1e-57; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 136 - 342
Target Start/End: Complemental strand, 16142451 - 16142237
Alignment:
Q  136 ggtccctgtaatctttcctggaaggacacataagcatgttttgccaagtcaaacaacgccacgtcagccac--------acgtcagcatttttgtaacaa 227  Q
    ||||||||||||||| |||| |||||||||||||| |||||||||| |||||||||||||||||||| |||        || ||||| |||||||||||     
T  16142451 ggtccctgtaatcttgcctgaaaggacacataagcttgttttgccacgtcaaacaacgccacgtcagtcaccgttagacacatcagcgtttttgtaacag 16142352  T
Q  228 atgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacat 327  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||  |||||||||||||||||||| || |    
T  16142351 atgctgacgggagggccgaaaatcaaaacgtttgtaacttacagggtttgttttagaacagaaaaaaatacagagacgaaaaccaaaaacacgcgaactt 16142252  T
Q  328 acatggacgatttac 342  Q
    ||| |||||||||||    
T  16142251 acaaggacgatttac 16142237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 136 - 341
Target Start/End: Original strand, 38729896 - 38730110
Alignment:
Q  136 ggtccctgtaatctttcctggaaggacacataagcatgttttgccaagtcaaacaacgccacgtcagccac--------acgtcagcatttttgtaacaa 227  Q
    |||| |||||||||| ||| ||||||||| | ||| |||||||||| ||||||||||||||||| |  |||        || ||||  |||||||||||     
T  38729896 ggtctctgtaatcttgcctagaaggacacgtgagcctgttttgccacgtcaaacaacgccacgtaaatcaccgttagacacatcagtgtttttgtaacag 38729995  T
Q  228 atgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacg-aaaaccaaaaacacgcggaca 326  Q
    | |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| ||     
T  38729996 aggctaacggcagggacgaaaatcaaaaggtttgtaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaaccaaaaacacgcgaact 38730095  T
Q  327 tacatggacgattta 341  Q
    |||| ||| ||||||    
T  38730096 tacaaggatgattta 38730110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 136 - 339
Target Start/End: Complemental strand, 38728409 - 38728198
Alignment:
Q  136 ggtccctgtaatctttcctggaaggacacataagcatgttttgccaagtcaaacaacgccacgtcagcca--------cacgtcagcatttttgtaacaa 227  Q
    |||||||| |||||| ||| ||| ||||| ||||| |||||||||| |||||||||||||| ||||| ||        ||| ||||| |||| ||||||     
T  38728409 ggtccctgcaatcttgccttgaaagacacgtaagcttgttttgccacgtcaaacaacgccatgtcagtcatcgttagacacatcagcgttttcgtaacag 38728310  T
Q  228 atgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacat 327  Q
    ||  | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||||||||| || | || |    
T  38728309 attatgacgggagggacgaaaatcaaaacgtttgtaacttgcagggtttgttttagaacaaaaaaagatacatggacgaaaaccaaaaactcgtgaactt 38728210  T
Q  328 acatggacgatt 339  Q
    ||| ||||||||    
T  38728209 acagggacgatt 38728198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 136 - 321
Target Start/End: Original strand, 16143430 - 16143623
Alignment:
Q  136 ggtccctgtaatctttcctggaaggacacataagcatgttttgccaagtcaaacaacgccacgtcagcc--------acacgtcagcatttttgtaacaa 227  Q
    |||||||||||||||| |||||||||||||||||| | |||||||| ||||||||| ||||||||||||        |||| ||||| ||||| |||||     
T  16143430 ggtccctgtaatcttttctggaaggacacataagcctcttttgccacgtcaaacaatgccacgtcagccaccgttagacacatcagcgtttttttaacag 16143529  T
Q  228 atgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    | | |||||  |||||| |||| ||||| |||   |||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||    
T  16143530 aagttaacgttagggactaaaaccaaaaagttaacaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaatcaaaaacacgc 16143623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 234 - 335
Target Start/End: Complemental strand, 45499424 - 45499323
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  |||||||||||| |||||||||||||||||| ||||| || |||||||||||||||||||| || |||| ||    
T  45499424 acgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacgcgaacttacaggg 45499325  T
Q  334 ac 335  Q
    ||    
T  45499324 ac 45499323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 234 - 335
Target Start/End: Complemental strand, 40303412 - 40303311
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  ||||||| |||| |||||||||||||||||| ||||| || |||||||||||||||||||| || |||| ||    
T  40303412 acgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacgcgaacttacaggg 40303313  T
Q  334 ac 335  Q
    ||    
T  40303312 ac 40303311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 234 - 335
Target Start/End: Original strand, 40304702 - 40304803
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||| |||||||||| |||||| |||   |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || |||| ||    
T  40304702 acggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgcgaacttacaggg 40304801  T
Q  334 ac 335  Q
    ||    
T  40304802 ac 40304803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 1840276 - 1840168
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  ||||||| |||| |||||||||||||||||| |||||| |||| ||||||||||||||||  |  |||| ||    
T  1840276 acgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacaagaacaaaaaccaaaaacacgccaaattacaggg 1840177  T
Q  334 acgatttac 342  Q
    |||||||||    
T  1840176 acgatttac 1840168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 13947866 - 13947759
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  ||||||| |||| |||||||||||||||||| |||||||| |||||||||||||||||||  |  |||| ||    
T  13947866 acgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagg-acgaaaaccaaaaacacgccaaattacaggg 13947768  T
Q  334 acgatttac 342  Q
    |||||||||    
T  13947767 acgatttac 13947759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 14089055 - 14088948
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  ||||||| |||| |||||||||||||||||| |||||||| |||||||||||||||||||  |  |||| ||    
T  14089055 acgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagg-acgaaaaccaaaaacacgccaaattacaggg 14088957  T
Q  334 acgatttac 342  Q
    |||||||||    
T  14088956 acgatttac 14088948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 322
Target Start/End: Original strand, 45492972 - 45493060
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcg 322  Q
    |||| |||||||||| |||||| |||   |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  45492972 acggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgcg 45493060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 322
Target Start/End: Original strand, 45500714 - 45500802
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcg 322  Q
    |||| |||||||||| |||||| |||   |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  45500714 acggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgcg 45500802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 1841695 - 1841782
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    ||||||||||||||||| |||| |||  |||||||||||| |||||||||||||||||| |||||||| || ||||||||||||||||    
T  1841695 acgggagggacgaaaataaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggacaaaaaccaaaaacacgc 1841782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 22053267 - 22053156
Alignment:
Q  210 tcagcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaa 309  Q
    ||||| ||||||||||| | | |||||  |||||| |||| |||||||||| |||||||| ||||| |||||||||||||||| |||||||| |||||||    
T  22053267 tcagcgtttttgtaacagaagttaacgttagggactaaaaccaaaacgtttataacttacggggtt-gttttagaacaaaaaaagatacagggacgaaaa 22053169  T
Q  310 ccaaaaacacgcg 322  Q
    | |||||||||||    
T  22053168 caaaaaacacgcg 22053156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 44465012 - 44465138
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||| || || |||| |||||| |||| ||||| |||| ||||||||| ||| ||||||||||||| |||  ||||| | |||| ||||||||    
T  44465012 tttttgtaacagatactgacggcagggaccaaaagcaaaatgtttataacttacaaggtctgttttagaacaacaaaaaatacaaggacgagaaccaaaa 44465111  T
Q  316 acacgcggacatacatggacgatttac 342  Q
    ||||||| || |||| |||||||||||    
T  44465112 acacgcgaacttacagggacgatttac 44465138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 342
Target Start/End: Complemental strand, 472868 - 472731
Alignment:
Q  205 acacgtcagcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaac 304  Q
    |||||| ||||||||||||||| ||| | || | |||||| |||| |||||||||| ||||||||| |  ||||||||||| |||||| ||| ||||||     
T  472868 acacgtaagcatttttgtaacagatgatgactgtagggaccaaaaacaaaacgtttataacttacatgagttgttttagaataaaaaaagattcaggaat 472769  T
Q  305 gaaaaccaaaaacacgcggacatacatggacgatttac 342  Q
    ||||||| |||||| ||| || |||| | |||||||||    
T  472768 gaaaaccgaaaacaagcgaacttacaggaacgatttac 472731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 342
Target Start/End: Complemental strand, 28563516 - 28563387
Alignment:
Q  213 gcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaacca 312  Q
    |||||||||||||| |   | |||||||||||||||| ||||| |||  ||||||| |||| ||||||||||| |||||| |||||| | ||||||||||    
T  28563516 gcatttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaacttataggggttgttttagaagaaaaaaagatacaaggacgaaaacca 28563417  T
Q  313 aaaacacgcggacatacatggacgatttac 342  Q
    |||||||||  |  |||| |||||||||||    
T  28563416 aaaacacgccaaattacagggacgatttac 28563387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 342
Target Start/End: Complemental strand, 44463701 - 44463577
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||| ||| |||||  |||||| |||| || || | || ||||||||||||| | |||||||||||||||  |||||| ||||||||||||||    
T  44463701 tttttgtaacagatgataacgatagggaccaaaagcataaagcttataacttacagggtctattttagaacaaaaaa--atacagaaacgaaaaccaaaa 44463604  T
Q  316 acacgcggacatacatggacgatttac 342  Q
    |||| || || ||||| ||||||||||    
T  44463603 acacacgaacttacatagacgatttac 44463577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 263 - 322
Target Start/End: Complemental strand, 7317480 - 7317421
Alignment:
Q  263 aacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcg 322  Q
    |||||| ||||||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  7317480 aacttatagggtttgttttagaacaaaaaaagatacaaggacgaaaaccaaaaacacgcg 7317421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 251 - 340
Target Start/End: Complemental strand, 35588229 - 35588140
Alignment:
Q  251 caaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacgattt 340  Q
    |||||||||| ||||||||  || ||||||||||| ||||||  ||||| | ||||||||||||| |||||| || ||||||||||||||    
T  35588229 caaaacgtttataacttacgagggttgttttagaataaaaaaatatacatggacgaaaaccaaaagcacgcgaacttacatggacgattt 35588140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 321
Target Start/End: Original strand, 44421264 - 44421369
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||| ||| | |||| || ||| |||| |||||||||| |||||||| || | |||||||||| |||||| |||||| | |||||||| ||||    
T  44421264 tttttgtaacagatggtgacggcagagaccaaaagcaaaacgtttataacttaccggctctgttttagaagaaaaaaggatacaaggacgaaaacaaaaa 44421363  T
Q  316 acacgc 321  Q
    ||||||    
T  44421364 acacgc 44421369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 263 - 335
Target Start/End: Original strand, 6844066 - 6844138
Alignment:
Q  263 aacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggac 335  Q
    |||||||| ||||||||||||||||||||| |||||| | | |||||||||||||||||| || |||| ||||    
T  6844066 aacttacaaggtttgttttagaacaaaaaaagatacaaggatgaaaaccaaaaacacgcgaacttacaaggac 6844138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 342
Target Start/End: Complemental strand, 34591838 - 34591736
Alignment:
Q  239 agggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacgat 338  Q
    |||||| |||| |||||||||| ||||||| |  |||||||||||||||||||| |||||| | |||||||| ||||| || |  || ||||||||||||    
T  34591838 agggaccaaaagcaaaacgtttataacttaaatagtttgttttagaacaaaaaa-gatacaaggacgaaaacaaaaaatacacaaacttacatggacgat 34591740  T
Q  339 ttac 342  Q
    ||||    
T  34591739 ttac 34591736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 9660935 - 9660866
Alignment:
Q  263 aacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatg 332  Q
    |||||||||||||| ||||||||||||||| ||||||   | |||||||||||||||||| || ||||||    
T  9660935 aacttacagggtttattttagaacaaaaaaagatacaacgatgaaaaccaaaaacacgcgaacttacatg 9660866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 321
Target Start/End: Complemental strand, 15347001 - 15346896
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||| ||  | |||| | |||| |||| |||||||||| ||| ||||| || |||||||||||||||||| |||| | | | |||||||||||    
T  15347001 tttttgtaacagattatgacggcaaggaccaaaagcaaaacgtttataatttacaagggttgttttagaacaaaaaaagatatatggatgaaaaccaaaa 15346902  T
Q  316 acacgc 321  Q
    ||||||    
T  15346901 acacgc 15346896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 322
Target Start/End: Original strand, 44097273 - 44097381
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaa--caaaaaacgatacaggaacgaaaaccaa 313  Q
    ||||||||||| | | |||||  |||||| |||| ||||| |||   |||||||||||||||||||||||   ||||||  ||||||| |||||||||||    
T  44097273 tttttgtaacagaagttaacgttagggactaaaaccaaaaggttaacaacttacagggtttgttttagaaggaaaaaaaaaatacagggacgaaaaccaa 44097372  T
Q  314 aaacacgcg 322  Q
    |||||||||    
T  44097373 aaacacgcg 44097381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 321
Target Start/End: Original strand, 22060401 - 22060507
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaac-aaaaaacgatacaggaacgaaaaccaaa 314  Q
    ||||||||||| | | |||||  ||| || |||| ||||||| || |||||| ||||| |||||||| ||| |||||| |||| ||| ||||||||||||    
T  22060401 tttttgtaacataagttaacgttaggaactaaaaccaaaacgcttataactttcaggggttgttttaaaacaaaaaaaagatatagggacgaaaaccaaa 22060500  T
Q  315 aacacgc 321  Q
    |||||||    
T  22060501 aacacgc 22060507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 342
Target Start/End: Original strand, 15348383 - 15348486
Alignment:
Q  239 agggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacgat 338  Q
    |||||| ||||  ||||| ||| ||||||||| || |||||||| ||||||||| |||||||  || ||||||||||| | |||  | |||| |||||||    
T  15348383 agggaccaaaagtaaaacatttataacttacatgggttgttttacaacaaaaaaagatacagagacaaaaaccaaaaagatgcgagcgtacaaggacgat 15348482  T
Q  339 ttac 342  Q
    ||||    
T  15348483 ttac 15348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 6842805 - 6842747
Alignment:
Q  263 aacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    ||||||| || ||||||||| || |||||| |||||||| | |||||||||||||||||    
T  6842805 aacttaccggatttgttttaaaataaaaaaagatacagggatgaaaaccaaaaacacgc 6842747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 10345120 - 10345169
Alignment:
Q  267 tacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaa 316  Q
    ||||||||||||||||||||||||||   |||||| |||||||| |||||    
T  10345120 tacagggtttgttttagaacaaaaaaacttacagggacgaaaacaaaaaa 10345169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 43518050 - 43518099
Alignment:
Q  267 tacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaa 316  Q
    ||||||||||||||||||||||||||   |||||| || |||||||||||    
T  43518050 tacagggtttgttttagaacaaaaaaacttacagggaccaaaaccaaaaa 43518099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 13948542 - 13948601
Alignment:
Q  237 ggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgata 297  Q
    |||||||||||||| |||| |||  |||||||||||| ||||||| |||||||||| ||||    
T  13948542 ggagggacgaaaataaaaaagttattaacttacaggg-ttgtttttgaacaaaaaaagata 13948601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 14089749 - 14089808
Alignment:
Q  237 ggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgata 297  Q
    |||||||||||||| |||| |||  |||||||||||| ||||||| |||||||||| ||||    
T  14089749 ggagggacgaaaataaaaaagttattaacttacaggg-ttgtttttgaacaaaaaaagata 14089808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 335
Target Start/End: Original strand, 22060133 - 22060201
Alignment:
Q  267 tacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggac 335  Q
    |||| |||||||||||||| ||||||   |||||| ||||||||||||||  |||| || |||||||||    
T  22060133 tacaaggtttgttttagaaaaaaaaatcttacagggacgaaaaccaaaaatgcgcgaacttacatggac 22060201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 3e-52; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 138 - 335
Target Start/End: Original strand, 12180475 - 12180680
Alignment:
Q  138 tccctgtaatctttcctggaaggacacataagcatgttttgccaagtcaaacaacgccacgtcagccac--------acgtcagcatttttgtaacaaat 229  Q
    ||||||||||||| ||| |||||| | |||||| |||||| ||| |||||||||||||||||||| |||        || ||| | ||||||||||| ||    
T  12180475 tccctgtaatcttgcctagaaggataaataagcttgtttttccacgtcaaacaacgccacgtcagtcaccgttagacacatcaacgtttttgtaacagat 12180574  T
Q  230 gctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatac 329  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || |||    
T  12180575 gctgacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgcgaacttac 12180674  T
Q  330 atggac 335  Q
    | ||||    
T  12180675 agggac 12180680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 136 - 342
Target Start/End: Original strand, 11671120 - 11671334
Alignment:
Q  136 ggtccctgtaatctttcctggaaggacacataagcatgttttgccaagtcaaacaacgccacgtcagccac--------acgtcagcatttttgtaacaa 227  Q
    ||||||| |||||||   ||||||||||||||||| |||||| ||| |||||||||||||||||||| |||        || |||||||||||||||||     
T  11671120 ggtccctataatcttgtgtggaaggacacataagcttgtttttccacgtcaaacaacgccacgtcagtcaccgttagacacatcagcatttttgtaacag 11671219  T
Q  228 atgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacat 327  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||||||| || |    
T  11671220 atgctgacgagagggacgaaaatcaaaacatttgtaacttacagggtttgttttagaacaaaaatagatacatggacgaaaacaaaaaacacgcgaactt 11671319  T
Q  328 acatggacgatttac 342  Q
    ||  |||||||||||    
T  11671320 acggggacgatttac 11671334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 136 - 322
Target Start/End: Complemental strand, 12178708 - 12178514
Alignment:
Q  136 ggtccctgtaatctttcctggaaggacacataagcatgttttgccaagtcaaacaacgccacgtcagccac--------acgtcagcatttttgtaacaa 227  Q
    ||||||||||||||||||| ||||||||||||||| ||||||| || ||||||||| |||||| |||||||        || ||||| ||||| |||||     
T  12178708 ggtccctgtaatctttcctagaaggacacataagcctgttttgtcacgtcaaacaatgccacgccagccaccgttagacacatcagcgtttttttaacag 12178609  T
Q  228 atgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcg 322  Q
    | | |||||  |||||| |||| ||||| |||   ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  12178608 aagttaacgttagggactaaaaccaaaaagttaacaacttacagagtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgcg 12178514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 234 - 335
Target Start/End: Complemental strand, 46245241 - 46245140
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  |||||||||||| |||||||||||||||||| ||||| || |||||||||||||||||||| || |||| ||    
T  46245241 acgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacgcgaacttacaggg 46245142  T
Q  334 ac 335  Q
    ||    
T  46245141 ac 46245140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 37131954 - 37131846
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||| ||||||||||| |||||||||| ||||||||| |  || ||||||||||||||| ||||||||||||||||||||| ||||||| || ||| |||    
T  37131954 acggaagggacgaaaaccaaaacgtttataacttacatgagttattttagaacaaaaaaagatacaggaacgaaaaccaaacacacgcgaacttacgtgg 37131855  T
Q  334 acgatttac 342  Q
    |||||||||    
T  37131854 acgatttac 37131846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 21716559 - 21716646
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||||||||||||||||||||| |||  |||||||||||| |||||||| ||||||||| |||||||| |||||||||||||||||||    
T  21716559 acgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacaaaaaaagatacagggacgaaaaccaaaaacacgc 21716646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 31392176 - 31392091
Alignment:
Q  235 cgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacg 320  Q
    ||||||||||||||||||||| |||  ||||||| |||| |||||||||||||||||| |||||||| ||||||||||||||||||    
T  31392176 cgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacg 31392091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 234 - 335
Target Start/End: Original strand, 46246515 - 46246616
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||| |||||||||| |||||| |||   |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || |||| ||    
T  46246515 acggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgcgaacttacaggg 46246614  T
Q  334 ac 335  Q
    ||    
T  46246615 ac 46246616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 40028576 - 40028468
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    ||||||||||||||||| |||| |||  ||||||| |||| |||||||||||||||||| |||||||| |||||||||||||||||||  |  |||| ||    
T  40028576 acgggagggacgaaaataaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacaggg 40028477  T
Q  334 acgatttac 342  Q
    |||||||||    
T  40028476 acgatttac 40028468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 342
Target Start/End: Original strand, 45277907 - 45278015
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  ||||||| |||| |||||||| ||||||||| |||||||| |||||||||||||||||||  |  |||| ||    
T  45277907 acgggagggacgaaaatcaaaaagttattaacttataggggttgttttaaaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacaggg 45278006  T
Q  334 acgatttac 342  Q
    |||||||||    
T  45278007 acgatttac 45278015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 234 - 317
Target Start/End: Complemental strand, 45276528 - 45276445
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaac 317  Q
    |||||||||||||||||||||| |||  |||||||||||| |||||||||||||||||| |||||||| || ||||||||||||    
T  45276528 acgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggacaaaaaccaaaaac 45276445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 236 - 342
Target Start/End: Original strand, 37133591 - 37133697
Alignment:
Q  236 gggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggac 335  Q
    |||||| ||||||| |||||||||| |||||| | ||| |||||||||||||||||| |||||||  |||||||||||||||||||| || |||  ||||    
T  37133591 gggaggaacgaaaaccaaaacgtttataacttccgggggttgttttagaacaaaaaaagatacagtgacgaaaaccaaaaacacgcgaacttacggggac 37133690  T
Q  336 gatttac 342  Q
    |||||||    
T  37133691 gatttac 37133697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 318
Target Start/End: Original strand, 8231574 - 8231658
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaaca 318  Q
    ||||||| |||||||||||||| |||  |||||||||||| |||||||||||||||||| |||||||| || |||||||||||||    
T  8231574 acgggagtgacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggacaaaaaccaaaaaca 8231658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 21715191 - 21715083
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  ||||||| |||| |||||||| ||||||||| |||||||| ||||||| |||||||||||  |  |||| ||    
T  21715191 acgggagggacgaaaatcaaaaagttattaacttatagggattgttttaaaacaaaaaaagatacagggacgaaaatcaaaaacacgccaaattacaggg 21715092  T
Q  334 acgatttac 342  Q
    |||||||||    
T  21715091 acgatttac 21715083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 342
Target Start/End: Original strand, 31393599 - 31393707
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    ||||||||||||||||| |||| |||  |||||||||||| |||||||| ||||||||| |||||| | |||||||||||||||||||  |  |||| ||    
T  31393599 acgggagggacgaaaattaaaaagttattaacttacaggggttgttttataacaaaaaaagatacaaggacgaaaaccaaaaacacgccaaattacaggg 31393698  T
Q  334 acgatttac 342  Q
    |||||||||    
T  31393699 acgatttac 31393707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 8230185 - 8230104
Alignment:
Q  238 gagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacac 319  Q
    ||||||||||||| |||| |||  ||||||| |||| |||||||||||||||||| |||||||| |||||||||||||||||    
T  8230185 gagggacgaaaataaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacac 8230104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 214 - 322
Target Start/End: Complemental strand, 37348874 - 37348766
Alignment:
Q  214 catttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaa 313  Q
    ||||||||||||| ||  | |||| | |||| |||| |||||||||| ||||||||| || |||||||||||||||||| |||| ||| || ||||||||    
T  37348874 catttttgtaacagataatgacggcatggactaaaaccaaaacgtttataacttacaaggattgttttagaacaaaaaatgatatagggactaaaaccaa 37348775  T
Q  314 aaacacgcg 322  Q
    |||||||||    
T  37348774 aaacacgcg 37348766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 13420226 - 13420313
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||| |||||| |||| ||||| | || |||||||||||| |||||||||||||||||| |||||||| || ||||||||||||||||    
T  13420226 acggcagggactaaaaccaaaatgcttataacttacaggggttgttttagaacaaaaaaagatacagggactaaaaccaaaaacacgc 13420313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 4675737 - 4675864
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  ||||||| || | |||||||||||||||||| |||||| | ||||||| |||||||||||  |  |||| ||    
T  4675737 acgggagggacgaaaatcaaaaagttattaacttatagtggttgttttagaacaaaaaa-gatacatggacgaaaatcaaaaacacgccaaattacaggg 4675835  T
Q  334 acgat--ttacgatttacatatttaagcc 360  Q
    |||||    ||||||||||||||||||||    
T  4675836 acgataggaacgatttacatatttaagcc 4675864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 32881233 - 32881153
Alignment:
Q  236 gggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaa 316  Q
    |||||||||||||||||||| |||  ||||||| |||| |||||||||||||||||| |||||| |||| ||||| |||||    
T  32881233 gggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacatgaactaaaacaaaaaa 32881153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 342
Target Start/End: Original strand, 40029969 - 40030077
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  ||||||| || | ||||||||||||||||||  ||||||| | |||||| ||||||||||  |  |||| ||    
T  40029969 acgggagggacgaaaatcaaaaagttactaacttatagaggttgttttagaacaaaaaaatatacagggatgaaaacaaaaaacacgccaaattacaggg 40030068  T
Q  334 acgatttac 342  Q
    |||||||||    
T  40030069 acgatttac 40030077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 318
Target Start/End: Complemental strand, 14774631 - 14774548
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaaca 318  Q
    |||||||||||||||||||||| |||  |||||| ||||| ||||||||||||| |||| |||||| | |||||||| |||||||    
T  14774631 acgggagggacgaaaatcaaaaagttattaacttgcaggggttgttttagaaca-aaaatgatacacggacgaaaacaaaaaaca 14774548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 318
Target Start/End: Complemental strand, 15225084 - 15225001
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaaca 318  Q
    |||||||||||||||||||||| |||  |||||| ||||| ||||||||||||| |||| |||||| | |||||||| |||||||    
T  15225084 acgggagggacgaaaatcaaaaagttattaacttgcaggggttgttttagaaca-aaaatgatacacggacgaaaacaaaaaaca 15225001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 15135515 - 15135440
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaa 291  Q
    ||||||||||||| | | |||||||||||||||||||||| |||  |||||| ||||| ||||||||||| |||||    
T  15135515 tttttgtaacaaaagttgacgggagggacgaaaatcaaaaagttattaacttgcaggggttgttttagaataaaaa 15135440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 21017733 - 21017803
Alignment:
Q  246 aaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaac 317  Q
    |||| ||||| |||| |||||||||||| |||||||||||||||||| |||||||| ||||||||| |||||    
T  21017733 aaaaccaaaatgtttataacttacaggggttgttttagaacaaaaaa-gatacagggacgaaaaccgaaaac 21017803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 240 - 341
Target Start/End: Original strand, 15136885 - 15136986
Alignment:
Q  240 gggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacgatt 339  Q
    |||| ||||||||||| |||  |||||| || || |||||||||||||||||| ||| || | ||||||| |||||||||||| |  |||| ||||||||    
T  15136885 gggatgaaaatcaaaaagttattaacttgcaagggttgttttagaacaaaaaaagattcaaggacgaaaatcaaaaacacgcgaatttacagggacgatt 15136984  T
Q  340 ta 341  Q
    ||    
T  15136985 ta 15136986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 30792752 - 30792828
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaa 292  Q
    |||||||||||||   | |||||||||||||||| ||||| |||  |||||||||||| ||||||||||| ||||||    
T  30792752 tttttgtaacaaagtttgacgggagggacgaaaagcaaaaagttattaacttacaggggttgttttagaagaaaaaa 30792828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 335
Target Start/End: Complemental strand, 11669955 - 11669859
Alignment:
Q  239 agggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggac 335  Q
    |||||| |||||||||| |||   ||||||||||||  ||||||||||||||||   |||| | |||||||||||||||| ||| || |||| ||||    
T  11669955 agggactaaaatcaaaaggttaacaacttacagggtgagttttagaacaaaaaaacttacatggacgaaaaccaaaaacatgcgaacttacagggac 11669859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 342
Target Start/End: Complemental strand, 3704464 - 3704409
Alignment:
Q  287 aaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacgatttac 342  Q
    |||||| |||| ||| |||||||||||||||| ||| || ||||||||||||||||    
T  3704464 aaaaaaagataaagggacgaaaaccaaaaacaagcgaacttacatggacgatttac 3704409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 28687306 - 28687371
Alignment:
Q  217 ttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgtttta 282  Q
    ||||||||| |||| | |||| |||||| |||||||||||||||||  |||||| | |||||||||    
T  28687306 ttttgtaacgaatgatgacggtagggactaaaatcaaaacgtttgtttcttacaagctttgtttta 28687371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 41593176 - 41593225
Alignment:
Q  267 tacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaa 316  Q
    ||||||||||||||||||||||||||   |||||| || |||||||||||    
T  41593176 tacagggtttgttttagaacaaaaaaacttacagggaccaaaaccaaaaa 41593225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 318
Target Start/End: Original strand, 32882655 - 32882739
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaaca 318  Q
    |||| ||||||||||||||||| ||   ||||||| | || |||||||||||||||| |  ||||| | || |||||||||||||    
T  32882655 acggaagggacgaaaatcaaaaagtcattaacttataagggttgttttagaacaaaagaatatacatggacaaaaaccaaaaaca 32882739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 37350123 - 37350199
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaa 292  Q
    ||||||||||| ||  | |||| |||||| |||| ||||| | || ||||||| |||| ||||||||||||||||||    
T  37350123 tttttgtaacagattatgacggcagggactaaaaccaaaatgcttataacttataggggttgttttagaacaaaaaa 37350199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 136 - 342
Target Start/End: Complemental strand, 2552631 - 2552418
Alignment:
Q  136 ggtccctgtaatctttcctggaaggacacataagcatgttttgccaagtcaaacaacgccacgtcagccac--------acgtcagcatttttgtaacaa 227  Q
    ||||||||||||||| ||||||||||||||||||| | |||||||| ||||||||||||||  |||| |||        || ||||  ||||||||||||    
T  2552631 ggtccctgtaatcttgcctggaaggacacataagcctcttttgccatgtcaaacaacgccatatcagtcaccgtcagacacatcagtgtttttgtaacaa 2552532  T
Q  228 atgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacat 327  Q
    ||| | |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| |||| |||| || |||||||||||  || |    
T  2552531 atgttgacgggaaggacgaaaatcaaaacatttgtaacttacggggtttgttttagaacaaaaaa-gatgcagggacgataatcaaaaacacgcaaactt 2552433  T
Q  328 acatggacgatttac 342  Q
    |||  ||||||||||    
T  2552432 acagagacgatttac 2552418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 3157963 - 3158085
Alignment:
Q  220 tgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacac 319  Q
    ||||||| ||||| |||| ||||||  ||| ||||| |||| ||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  3157963 tgtaacagatgctgacggcagggaccgaaagcaaaatgtttataacttacagggtctgttttagaacaaaaaaagatacagggacgaaaaccaaaaacac 3158062  T
Q  320 gcggacatacatggacgatttac 342  Q
    ||| || |||| |||||||||||    
T  3158063 gcgaacttacagggacgatttac 3158085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 2552676 - 2552800
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||| | ||||| | |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||  ||||| ||| |||||| ||||    
T  2552676 tttttgtaatagatgctgatgggagggacgaaaatcaaaacgtt-gtaactaacagggtttgttttagaacaaaaaa-tatacaagaatgaaaacaaaaa 2552773  T
Q  316 acacgcggacatacatggacgatttac 342  Q
    ||||||| || |||| |||||||||||    
T  2552774 acacgcgaacttacagggacgatttac 2552800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 25264459 - 25264351
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  ||| |||||||| |||||||| ||||||||| |||||| | |||||||||||||||||||  |  |||| ||    
T  25264459 acgggagggacgaaaatcaaaaagttattaatttacagggattgttttaaaacaaaaaaagatacaaggacgaaaaccaaaaacacgccaaattacaggg 25264360  T
Q  334 acgatttac 342  Q
    |||||||||    
T  25264359 acgatttac 25264351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 25265845 - 25265932
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||||||||||||||||||||| |||  ||||||| |||| |||||||| ||||||||| |||||||| |||||||| ||||||||||    
T  25265845 acgggagggacgaaaatcaaaaagttattaacttatagggattgttttaaaacaaaaaaagatacagggacgaaaacaaaaaacacgc 25265932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 216 - 322
Target Start/End: Complemental strand, 5462071 - 5461965
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||| ||||| |||| |||||| |||| ||||| |||| ||| ||||||||| ||||||||||||||||| ||||||   |||||||| ||||    
T  5462071 tttttgtaacagatgctgacggcagggaccaaaagcaaaatgtttataaattacagggtctgttttagaacaaaaaaagatacaaagacgaaaacaaaaa 5461972  T
Q  316 acacgcg 322  Q
    |||||||    
T  5461971 acacgcg 5461965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 39885998 - 39886124
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||| ||  | |||| |||||| |||| ||||| | || |||||||||||| ||||||||||| |||||| |||||||| || ||||||||||    
T  39885998 tttttgtaacagattatgacggcagggactaaaaccaaaatgcttataacttacaggggttgttttagaataaaaaaagatacagggactaaaaccaaaa 39886097  T
Q  316 acacgcggacatacatggacgatttac 342  Q
    ||||||| || |||| |||| ||||||    
T  39886098 acacgcgaacttacagggaccatttac 39886124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 342
Target Start/End: Original strand, 15279551 - 15279681
Alignment:
Q  212 agcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaacc 311  Q
    ||||||||||||||| ||| | |||| |||||| |||| || || | || ||| || |||||| ||||||| ||||||||| ||||||   |||||||||    
T  15279551 agcatttttgtaacagatgatgacggtagggaccaaaagcataaggcttataatttgcagggtctgttttaaaacaaaaaaagatacaatgacgaaaacc 15279650  T
Q  312 aaaaacacgcggacatacatggacgatttac 342  Q
    ||||||||||| || |||| |||||||||||    
T  15279651 aaaaacacgcgaacttacaaggacgatttac 15279681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 342
Target Start/End: Original strand, 15459920 - 15460050
Alignment:
Q  212 agcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaacc 311  Q
    ||||||||||||||| ||| | |||| |||||| |||| || || | || ||| || |||||| ||||||| ||||||||| ||||||   |||||||||    
T  15459920 agcatttttgtaacagatgatgacggtagggaccaaaagcataaggcttataatttgcagggtctgttttaaaacaaaaaaagatacaatgacgaaaacc 15460019  T
Q  312 aaaaacacgcggacatacatggacgatttac 342  Q
    ||||||||||| || |||| |||||||||||    
T  15460020 aaaaacacgcgaacttacaaggacgatttac 15460050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 33295386 - 33295472
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||||||||||| ||||||||| |||  ||||||||| || |||||||||||||||||| |||||||| || ||||| ||||||||||    
T  33295386 acgggagggacggaaatcaaaaagttattaacttacaagggttgttttagaacaaaaaa-gatacagggacaaaaacaaaaaacacgc 33295472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 239 - 342
Target Start/End: Complemental strand, 39884730 - 39884627
Alignment:
Q  239 agggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacgat 338  Q
    |||||| |||| ||||| | || ||||||||| || || ||||||||||||||| |||||||| || ||||||||||||||||| || |||| |||| ||    
T  39884730 agggactaaaaccaaaatgcttataacttacaagggttattttagaacaaaaaaagatacagggactaaaaccaaaaacacgcgaacttacagggaccat 39884631  T
Q  339 ttac 342  Q
    ||||    
T  39884630 ttac 39884627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 317
Target Start/End: Complemental strand, 33294059 - 33293975
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaa-aaaacgatacaggaacgaaaaccaaaaac 317  Q
    |||||||||||||||||||||| |||  ||| ||| |||| |||||||||||||| |||| |||||| | |||||||||||||||    
T  33294059 acgggagggacgaaaatcaaaaagttattaatttataggggttgttttagaacaaaaaaaagatacaaggacgaaaaccaaaaac 33293975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 22714006 - 22714097
Alignment:
Q  251 caaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacgatttac 342  Q
    ||||||||||  ||||||| ||| ||||||||| ||||||||  ||||||| ||||||||||||||||| || || |||| || ||||||||    
T  22714006 caaaacgtttagaacttaccggggttgttttaggacaaaaaaaaatacagggacgaaaaccaaaaacacacgaacttacaggggcgatttac 22714097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 319
Target Start/End: Complemental strand, 27166902 - 27166799
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||| | |||||||||||| ||||||||||||||| | | ||||||||||| | |||||  || |||||| |||||||   |||||| |||||    
T  27166902 tttttgtaacagaagctaacgggaggaacgaaaatcaaaacgatagcaacttacagggatggttttgaaagaaaaaaagatacagtggcgaaaagcaaaa 27166803  T
Q  316 acac 319  Q
    ||||    
T  27166802 acac 27166799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 27824484 - 27824530
Alignment:
Q  246 aaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaa 292  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  27824484 aaaatcaaaacgtttataacttatagggtttgttttagaacaaaaaa 27824530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 342
Target Start/End: Original strand, 1650153 - 1650258
Alignment:
Q  238 gagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaac-gatacaggaacgaaaaccaaaaacacgcggacatacatggacg 336  Q
    |||||||||||| |||||| ||| ||||  ||| || ||||||||||| ||||||  |||||| |||||||||| ||||||||||| || |||| |||||    
T  1650153 gagggacgaaaaccaaaacatttataacaaacaagggttgttttagaataaaaaaaagatacatgaacgaaaactaaaaacacgcgaacttacaaggacg 1650252  T
Q  337 atttac 342  Q
     |||||    
T  1650253 gtttac 1650258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 26719497 - 26719396
Alignment:
Q  241 ggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacgattt 340  Q
    |||| |||| |||||| ||| |||||||||||  |||||||  || |||||| |||||| | |||||||| ||||||||||| || |||||||| |||||    
T  26719497 ggaccaaaaccaaaacatttataacttacaggagttgttttgcaagaaaaaaagatacaaggacgaaaacaaaaaacacgcgaacttacatggatgattt 26719398  T
Q  341 ac 342  Q
    ||    
T  26719397 ac 26719396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 322
Target Start/End: Original strand, 26720171 - 26720276
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||||||  |  ||| || ||| |||| |||||| ||| |||||||||||| ||||||   |||||||||  || |||| |||||||||||||    
T  26720171 tttttgtaacaaataatggcggcagagaccaaaaccaaaacatttataacttacaggggttgtttcgcaacaaaaaat-atgcagggacgaaaaccaaaa 26720269  T
Q  316 acacgcg 322  Q
    |||||||    
T  26720270 acacgcg 26720276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 319
Target Start/End: Original strand, 61080 - 61125
Alignment:
Q  274 tttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacac 319  Q
    ||||||||||||||||||| |||||| || |||| |||||||||||    
T  61080 tttgttttagaacaaaaaaagatacaagagcgaagaccaaaaacac 61125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 24893167 - 24893207
Alignment:
Q  241 ggacgaaaatcaaaacgtttgtaacttacagggtttgtttt 281  Q
    |||| |||||||||||||||| |||||||| ||||||||||    
T  24893167 ggactaaaatcaaaacgtttgcaacttacatggtttgtttt 24893207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 318
Target Start/End: Original strand, 27339166 - 27339210
Alignment:
Q  274 tttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaaca 318  Q
    |||| |||||||||||||| | ||||||||||||||| |||||||    
T  27339166 tttgatttagaacaaaaaaagttacaggaacgaaaacaaaaaaca 27339210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 210 - 309
Target Start/End: Complemental strand, 3069067 - 3068968
Alignment:
Q  210 tcagcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaa 309  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||| |||||||  |||||||    
T  3069067 tcagcatttttgtaacagatgctaacgggagggacgaaaatcaaaacatttgtaatttacagggattgttttagaacaaaaaaagatacagagacgaaaa 3068968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 19994617 - 19994509
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  ||||||| |||| |||||||||||||||||| |||||||| |||||||||||||||||||  |  |||| ||    
T  19994617 acgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacaggg 19994518  T
Q  334 acgatttac 342  Q
    |||||||||    
T  19994517 acgatttac 19994509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 236 - 342
Target Start/End: Original strand, 19995996 - 19996102
Alignment:
Q  236 gggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggac 335  Q
    |||||||||||||||||||| |||  |||||||||||| |||||||||||||||||| |||||||| || ||||||||||||||||  |  |||| ||||    
T  19995996 gggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggaccaaaaccaaaaacacgccaaattacagggac 19996095  T
Q  336 gatttac 342  Q
    |||||||    
T  19996096 gatttac 19996102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 237 - 342
Target Start/End: Original strand, 48713405 - 48713510
Alignment:
Q  237 ggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacg 336  Q
    ||||||||||||| ||||| |||  |||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||  |  |||| |||||    
T  48713405 ggagggacgaaaagcaaaaggttattaacttacaggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacagggacg 48713504  T
Q  337 atttac 342  Q
    ||||||    
T  48713505 atttac 48713510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 44251724 - 44251616
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  ||||||||| || |||||||||||||||||| |||||| | |||||||||||||||||||  |  |||| ||    
T  44251724 acgggagggacgaaaatcaaaaagttattaacttacaagggttgttttagaacaaaaaaagatacaaggacgaaaaccaaaaacacgccaaattacaggg 44251625  T
Q  334 acgatttac 342  Q
    |||||||||    
T  44251624 acgatttac 44251616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 342
Target Start/End: Original strand, 55948893 - 55949001
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||| ||||||| ||| |||  |||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||  |  |||| ||    
T  55948893 acgggagggaagaaaatccaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacaagg 55948992  T
Q  334 acgatttac 342  Q
    |||||||||    
T  55948993 acgatttac 55949001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 237 - 342
Target Start/End: Original strand, 32082576 - 32082681
Alignment:
Q  237 ggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacg 336  Q
    ||||||||||||| ||||| |||  |||||||||||| || ||||||||||||||| |||||||| |||||||||||||||||||  |  |||| |||||    
T  32082576 ggagggacgaaaagcaaaaagttattaacttacaggggttattttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacacggacg 32082675  T
Q  337 atttac 342  Q
    ||||||    
T  32082676 atttac 32082681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 10337223 - 10337115
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||| ||||| ||||| |||  |||||||||||| |||||||||||||||||| |||||| | |||||||||||||||||||  |  |||| ||    
T  10337223 acgggagggatgaaaagcaaaaggttattaacttacaggggttgttttagaacaaaaaaagatacaaggacgaaaaccaaaaacacgccaaattacaggg 10337124  T
Q  334 acgatttac 342  Q
    |||||||||    
T  10337123 acgatttac 10337115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 42977317 - 42977209
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||| ||||| |||  ||||||| | || |||||||||||||||||| |||||||| |||||||||||||||||||  |  |||| ||    
T  42977317 acgggagggacgaaaagcaaaaagttattaacttaaatgggttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacaagg 42977218  T
Q  334 acgatttac 342  Q
    |||||||||    
T  42977217 acgatttac 42977209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 342
Target Start/End: Original strand, 42978859 - 42978967
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||| |||||  ||  ||||||||| || |||||||||||||||||| |||||||| |||||||||||||||||||  |  |||| ||    
T  42978859 acgggagggacgaaaagcaaaaaattattaacttacaaggattgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacaagg 42978958  T
Q  334 acgatttac 342  Q
    |||||||||    
T  42978959 acgatttac 42978967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 316
Target Start/End: Complemental strand, 54121964 - 54121864
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||| |   |||||||||||||||||| ||||| |||  |||||||||||| |||||||||||||||||| |||||||| |||||||| ||||    
T  54121964 tttttgtaacagagtttaacgggagggacgaaaagcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggacgaaaacaaaaa 54121865  T
Q  316 a 316  Q
    |    
T  54121864 a 54121864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 54535097 - 54534989
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||| |||||| |||| |||||| ||| ||| |||| |||| | ||||||||||||||| || ||||| |||||||||||||||||||| || |||||||    
T  54535097 acggtagggacaaaaagcaaaacatttataatttacggggtctattttagaacaaaaaaagacacagggacgaaaaccaaaaacacgcgaacttacatgg 54534998  T
Q  334 acgatttac 342  Q
    |||||||||    
T  54534997 acgatttac 54534989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 341
Target Start/End: Complemental strand, 18597751 - 18597644
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  |||||||| | | ||||||||||| |||||| |||||||| ||||||||||||||||||   |  |||||||    
T  18597751 acgggagggacgaaaatcaaaaagttattaacttacggaggttgttttagaataaaaaaagatacagggacgaaaaccaaaaacacggcaaattacatgg 18597652  T
Q  334 acgattta 341  Q
    ||||||||    
T  18597651 acgattta 18597644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 24919154 - 24919063
Alignment:
Q  251 caaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacgatttac 342  Q
    |||| ||||| |||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||  || |||| | |||||||||    
T  24919154 caaagcgtttataacttacaggggttgttttagaacaaaaaaagatacaggaacgaagaccaaaaacacgcaaacttacaggtacgatttac 24919063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 44253132 - 44253219
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    ||||||| |||||||||||||| |||  ||||||| |||| |||||||||||||||||| |||| ||| |||||||||||||||||||    
T  44253132 acgggagagacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatatagggacgaaaaccaaaaacacgc 44253219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 216 - 322
Target Start/End: Complemental strand, 33607605 - 33607499
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||| ||||| ||| |||||  |||||| |||| ||||| ||||  ||||||||||||||||||||||| |||||| |||||| | |||||||||||||    
T  33607605 tttttctaacagatgttaacgttagggactaaaaccaaaatgtttacaacttacagggtttgttttagaaaaaaaaaagatacaaggacgaaaaccaaaa 33607506  T
Q  316 acacgcg 322  Q
    |||||||    
T  33607505 acacgcg 33607499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 234 - 342
Target Start/End: Original strand, 42889750 - 42889858
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||| |||||| |||| ||||| |||| ||||||||| ||| ||||||||||||||||| |||||| | |||||||| ||||||||| | || |||| ||    
T  42889750 acggcagggaccaaaagcaaaatgtttataacttacatggtctgttttagaacaaaaaaagatacaaggacgaaaacaaaaaacacgtgaacttacaggg 42889849  T
Q  334 acgatttac 342  Q
    |||||||||    
T  42889850 acgatttac 42889858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 234 - 318
Target Start/End: Original strand, 54123485 - 54123569
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaaca 318  Q
    |||||||||||||||| ||||| |||  |||||||||||  ||||||||||||||||||  ||||||| ||||||||||||||||    
T  54123485 acgggagggacgaaaagcaaaaagttattaacttacaggagttgttttagaacaaaaaaatatacagggacgaaaaccaaaaaca 54123569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 21354745 - 21354804
Alignment:
Q  263 aacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcg 322  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  21354745 aacttacagggtttgttttagaacaaaaaaagatacagggacgaaaatcaaaaacacgcg 21354804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 335
Target Start/End: Complemental strand, 22307808 - 22307689
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||| ||  | |||| |||||| |||| ||||| | || ||||||||| || ||||||||||||||||||||||||||| || ||||||||||    
T  22307808 tttttgtaacagattatgacggcagggactaaaaccaaaatgcttataacttacaagggttgttttagaacaaaaaacgatacagggactaaaaccaaaa 22307709  T
Q  316 acacgcggacatacatggac 335  Q
    ||| ||| || |||| ||||    
T  22307708 acatgcgaacttacagggac 22307689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 234 - 316
Target Start/End: Complemental strand, 55947479 - 55947397
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaa 316  Q
    |||||||||||||||||||||| |||  ||||||| ||||  ||||||| ||||||||| |||||||| ||||||||||||||    
T  55947479 acgggagggacgaaaatcaaaaagttattaacttataggggctgttttataacaaaaaaagatacagggacgaaaaccaaaaa 55947397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 22309085 - 22309186
Alignment:
Q  241 ggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacgattt 340  Q
    |||| |||| ||||| | || |||||||||||| ||||||||||| |||||| |||||||| || ||||||||||||||||| || |||| |||| ||||    
T  22309085 ggactaaaaccaaaatgcttataacttacaggggttgttttagaataaaaaaagatacagggactaaaaccaaaaacacgcgaacttacagggaccattt 22309184  T
Q  341 ac 342  Q
    ||    
T  22309185 ac 22309186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 9561948 - 9561857
Alignment:
Q  251 caaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacgatttac 342  Q
    |||||| ||| |||||||||| | ||||||||||  |||||| |||||||  |||||||||||||||||||| || |||| |||||||||||    
T  9561948 caaaacatttataacttacagaggttgttttagataaaaaaaagatacagagacgaaaaccaaaaacacgcgaacttacagggacgatttac 9561857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 234 - 342
Target Start/End: Original strand, 10338108 - 10338218
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaac--aaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacat 331  Q
    |||||||||||||||| ||||| |||  |||||||||||| |||||||| |||  |||||| |||||||  || ||||||||||||||||  |  |||||    
T  10338108 acgggagggacgaaaagcaaaaagttattaacttacaggggttgttttaaaacaaaaaaaaagatacagagacaaaaaccaaaaacacgcaaaattacat 10338207  T
Q  332 ggacgatttac 342  Q
    |||||||||||    
T  10338208 ggacgatttac 10338218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 263 - 342
Target Start/End: Complemental strand, 38157110 - 38157031
Alignment:
Q  263 aacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacgatttac 342  Q
    |||||||| |||||||||||||||||||||   |||||| |||||||||||||||||||| || |||| ||| |||||||    
T  38157110 aacttacaaggtttgttttagaacaaaaaaaattacagggacgaaaaccaaaaacacgcgaacttacagggatgatttac 38157031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 290
Target Start/End: Complemental strand, 36887101 - 36887016
Alignment:
Q  205 acacgtcagcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaa 290  Q
    |||| ||||||||||||||||| ||| ||||||||| ||||||||| ||||| ||  ||||||| ||| |||||||||||| ||||    
T  36887101 acacatcagcatttttgtaacagatgttaacgggagagacgaaaatgaaaacattattaacttataggatttgttttagaaaaaaa 36887016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 214 - 322
Target Start/End: Original strand, 9563255 - 9563363
Alignment:
Q  214 catttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaa 313  Q
    ||||||||||| | ||| | |||||| | || |||| |||||| ||| |||||| ||||| |||||| ||||||||||| |||||||| |||||||| ||    
T  9563255 catttttgtaaaagatgatgacgggatgaaccaaaaccaaaacatttataactttcaggggttgtttaagaacaaaaaaagatacagggacgaaaacaaa 9563354  T
Q  314 aaacacgcg 322  Q
    ||| |||||    
T  9563355 aaatacgcg 9563363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 48711977 - 48711869
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||| ||||||||||||||| |||   ||||| ||||| || ||||||||||||||| |||||| | |||||||| ||||||||||  |  |||| ||    
T  48711977 acgggaaggacgaaaatcaaaatgttatcaacttgcaggggttattttagaacaaaaaaagatacaaggacgaaaacaaaaaacacgcaaaattacaagg 48711878  T
Q  334 acgatttac 342  Q
    |||||||||    
T  48711877 acgatttac 48711869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 54536618 - 54536745
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaac-aaaaaacgatacaggaacgaaaaccaaa 314  Q
    ||||||||||| ||| | || | |||||| |||| |||||||||| ||| ||||| ||| ||||||||||| |||||| |||||| | || ||||||||     
T  54536618 tttttgtaacagatggtgacagcagggaccaaaagcaaaacgtttataatttacatggtctgttttagaacaaaaaaaagatacatggacaaaaaccaag 54536717  T
Q  315 aacacgcggacatacatggacgatttac 342  Q
    |||||||| |  |||| |||||||||||    
T  54536718 aacacgcgaatttacagggacgatttac 54536745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 232 - 321
Target Start/End: Original strand, 39654612 - 39654699
Alignment:
Q  232 taacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||||||||||||||||| ||||| |||   |||||||| |||||||||||||| ||||||  ||||||  ||||||||||||| |||||    
T  39654612 taacgggagggacgaaaaccaaaaggttaacaacttacatggtttgttttagaaaaaaaaa--atacagtgacgaaaaccaaaatcacgc 39654699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 53355219 - 53355161
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaa 292  Q
    |||||||||||||||||||||| |||  |||||||||||| ||||||||||||| ||||    
T  53355219 acgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacacaaaa 53355161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 21354613 - 21354666
Alignment:
Q  138 tccctgtaatctttcctggaaggacacataagcatgttttgccaagtcaaacaa 191  Q
    |||||||||||||||||  |||||||||||||| |||||||||| |||||||||    
T  21354613 tccctgtaatctttcctaaaaggacacataagcctgttttgccacgtcaaacaa 21354666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 335
Target Start/End: Original strand, 33609311 - 33609385
Alignment:
Q  263 aacttacagggtttgttttagaac--aaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggac 335  Q
    |||||||||||||||||||||||   |||||| |||||| | |||||||||||||||||||| || |||| ||||    
T  33609311 aacttacagggtttgttttagaaagaaaaaaaagatacaaggacgaaaaccaaaaacacgcgaacttacagggac 33609385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 342
Target Start/End: Complemental strand, 55017831 - 55017751
Alignment:
Q  263 aacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaac-caaaaacacgcggacatacatggacgatttac 342  Q
    |||||||| ||||| |||||||||||||||   ||||| |||||||||  ||||||||||| || |||| |||||||||||    
T  55017831 aacttacaaggtttattttagaacaaaaaaaattacagaaacgaaaacaaaaaaacacgcgaacttacagggacgatttac 55017751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 25351745 - 25351825
Alignment:
Q  239 agggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||||| |||| |||||||||| |||||||||||| || ||||||||||||||| |||||| | || |||| |||| ||||||    
T  25351745 agggaccaaaaccaaaacgtttataacttacaggg-ttattttagaacaaaaaa-gatacaaggacaaaaatcaaacacacgc 25351825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 25350599 - 25350558
Alignment:
Q  251 caaaacgtttgtaacttacagggtttgttttagaacaaaaaa 292  Q
    |||||| ||| |||||| ||||||||||||||||||||||||    
T  25350599 caaaacatttataacttccagggtttgttttagaacaaaaaa 25350558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 6e-32; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 27756707 - 27756833
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||||||||| |||| |||||| |||| ||||| |||| ||| ||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  27756707 tttttgtaacaaatgctgacggcagggaccaaaagcaaaatgtttataatttacagggtttgttttagaacaaaaaaagatacagggacgaaaacaaaaa 27756806  T
Q  316 acacgcggacatacatggacgatttac 342  Q
    ||||||| || || | |||||||||||    
T  27756807 acacgcgaacttagagggacgatttac 27756833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 16310021 - 16310147
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||| ||||| |||| |||||| |||| ||||| |||| ||||||||| ||| |||||||||||||||||  ||| |||||||||||||||||    
T  16310021 tttttgtaacagatgctgacggcagggaccaaaagcaaaatgtttataacttacaaggtctgttttagaacaaaaaaatatataggaacgaaaaccaaaa 16310120  T
Q  316 acacgcggacatacatggacgatttac 342  Q
    |||  || || ||||||||||||||||    
T  16310121 acatacgaacttacatggacgatttac 16310147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 30333947 - 30334034
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||||||||||||||||||||| |||  |||||||||||| |||||||||||||||||| |||||||| || ||||||||||||||||    
T  30333947 acgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggacaaaaaccaaaaacacgc 30334034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 213 - 342
Target Start/End: Original strand, 17554922 - 17555052
Alignment:
Q  213 gcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacg-aaaacc 311  Q
    |||||||||||||  | | | |||||||||||||||||||||| |||  |||||| ||||| ||||||||||||||||||  ||||||| ||| ||||||    
T  17554922 gcatttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttgcaggggttgttttagaacaaaaaataatacagggacgaaaaacc 17555021  T
Q  312 aaaaacacgcggacatacatggacgatttac 342  Q
    ||||||||||| || ||||||||| ||||||    
T  17555022 aaaaacacgcgaacttacatggacaatttac 17555052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 234 - 335
Target Start/End: Complemental strand, 38624835 - 38624734
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  ||||||| |||| |||||||||||||||||| ||||| || |||||||||||||||||||| || |||| ||    
T  38624835 acgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacgcgaacttacaggg 38624736  T
Q  334 ac 335  Q
    ||    
T  38624735 ac 38624734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 342
Target Start/End: Original strand, 25916218 - 25916326
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    ||||||||||||||||| |||| |||  ||||||| |||| |||||||||||||||||| |||||||| || ||||||||||||||||  |  |||||||    
T  25916218 acgggagggacgaaaattaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacaaaaaccaaaaacacgccaaattacatgg 25916317  T
Q  334 acgatttac 342  Q
    |||||||||    
T  25916318 acgatttac 25916326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 216 - 342
Target Start/End: Complemental strand, 16308703 - 16308576
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaac-gatacaggaacgaaaaccaaa 314  Q
    ||||||||||| ||| | |||| |||||| |||| || || | || ||||||||||||| |||||||||||||||||  |||||||| ||||||||||||    
T  16308703 tttttgtaacagatgatgacggtagggaccaaaagcacaaggcttataacttacagggtctgttttagaacaaaaaaaagatacagggacgaaaaccaaa 16308604  T
Q  315 aacacgcggacatacatggacgatttac 342  Q
    |||||||| || |||| |||||||||||    
T  16308603 aacacgcgaacttacagggacgatttac 16308576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 320
Target Start/End: Original strand, 1418876 - 1418962
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacg 320  Q
    |||||||||||||||||||||| |||  ||||||| |||| |||||||||||||||||| |||||||| |||||||| |||||||||    
T  1418876 acgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacgaaaacaaaaaacacg 1418962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 11772643 - 11772727
Alignment:
Q  237 ggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    ||||||||||||||||||| |||  ||||||||| || |||||||||||||||||| ||||| || |||||||||||||||||||    
T  11772643 ggagggacgaaaatcaaaaagttattaacttacaagggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacgc 11772727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 8872633 - 8872552
Alignment:
Q  240 gggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||||||||| ||||| |||  |||||||  ||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  8872633 gggacgaaaagcaaaaagttattaacttatgggggttgttttagaacaaaaaaagatacaggaacgaaaaccaaaaacacgc 8872552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 342
Target Start/End: Complemental strand, 30332399 - 30332294
Alignment:
Q  237 ggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacg 336  Q
    ||||||||||||||||||| |||  ||||||| |||| |||||||||||||||||| |||||||| |||||||| ||||| ||||  |  |||| |||||    
T  30332399 ggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacgaaaacaaaaaatacgccaaattacagggacg 30332300  T
Q  337 atttac 342  Q
    ||||||    
T  30332299 atttac 30332294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 335
Target Start/End: Original strand, 38626110 - 38626211
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||| |||||||||| |||||| |||   |||||||||||||||||||||||||||||| |||||| | |||||||||||||||| ||| || |||| ||    
T  38626110 acggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacatggacgaaaaccaaaaacatgcgaacttacaggg 38626209  T
Q  334 ac 335  Q
    ||    
T  38626210 ac 38626211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 234 - 342
Target Start/End: Original strand, 39103351 - 39103459
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||  ||||| |||  ||||||| | || |||||||||||||||||| ||||| ||||||||||||||||||||||  |  |||| ||    
T  39103351 acgggagggacgaaacgcaaaaagttattaacttatacgggttgttttagaacaaaaaaagatactggaacgaaaaccaaaaacacgccaaattacaagg 39103450  T
Q  334 acgatttac 342  Q
    |||||||||    
T  39103451 acgatttac 39103459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 317
Target Start/End: Complemental strand, 39101834 - 39101751
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaac 317  Q
    |||||||||||||||| ||||| |||  |||| ||||||| |||||||||||||||||| || |||| ||||||||||||||||    
T  39101834 acgggagggacgaaaagcaaaaagttattaacatacaggggttgttttagaacaaaaaaagacacagaaacgaaaaccaaaaac 39101751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 318
Target Start/End: Original strand, 8874218 - 8874298
Alignment:
Q  238 gagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaaca 318  Q
    ||||||| |||| ||||| |||  |||||||||||| ||||||||||||||||||  ||||||| ||||||||||||||||    
T  8874218 gagggacaaaaagcaaaaagttattaacttacaggggttgttttagaacaaaaaaatatacagggacgaaaaccaaaaaca 8874298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 11771312 - 11771230
Alignment:
Q  239 agggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||||||||| |||||| |||   |||||||||||||||||||| || |||||| |||||||| ||||||| |||||||||||    
T  11771312 agggacgaaattcaaaaagttatcaacttacagggtttgttttaaaaaaaaaaaagatacagggacgaaaatcaaaaacacgc 11771230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 36619685 - 36619576
Alignment:
Q  213 gcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaa-aaaacgatacaggaacgaaaacc 311  Q
    |||||||||||||| |   | |||||||||||||||| ||||| | |  ||||||| |||| |||||||||||||| |||| |||||||| ||||||| |    
T  36619685 gcatttttgtaacagagtttgacgggagggacgaaaagcaaaaagctattaacttataggggttgttttagaacaaaaaaaagatacagggacgaaaatc 36619586  T
Q  312 aaaaacacgc 321  Q
    ||||||||||    
T  36619585 aaaaacacgc 36619576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 216 - 322
Target Start/End: Original strand, 37498817 - 37498923
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||| ||| | || | |||||| |||| |||||||| || | |||||| ||||||||||  || |||||| |||||| | |||||||||||||    
T  37498817 tttttgtaacagatgatgacagtagggaccaaaagcaaaacgtgtgcatcttacaaggtttgttttgcaataaaaaaagatacatggacgaaaaccaaaa 37498916  T
Q  316 acacgcg 322  Q
    |||||||    
T  37498917 acacgcg 37498923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 1417530 - 1417462
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttaca-gggtttgttttagaacaaaaaacgatacagg 301  Q
    ||||||||||||||||| |||| |||  ||||||||| ||| |||||||||||||||||| ||||||||    
T  1417530 acgggagggacgaaaataaaaaagttattaacttacagggggttgttttagaacaaaaaaagatacagg 1417462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 28803762 - 28803691
Alignment:
Q  246 aaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaaca 318  Q
    |||| |||||||||| |||||||| | |||||||||||||||||||| |||||| | |||||||  |||||||    
T  28803762 aaaaccaaaacgtttataacttacggtgtttgttttagaacaaaaaa-gatacatggacgaaaataaaaaaca 28803691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 33084079 - 33084134
Alignment:
Q  263 aacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacac 319  Q
    |||||||||| ||| ||||||||||||||| |||||||| | |||||||||||||||    
T  33084079 aacttacagg-tttattttagaacaaaaaaagatacagggatgaaaaccaaaaacac 33084134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 234 - 314
Target Start/End: Original strand, 36621166 - 36621246
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaa 314  Q
    |||||||||||||||| ||||| |||  |||  |||| || |||||||||||||||||| |||||  | ||||||||||||    
T  36621166 acgggagggacgaaaagcaaaaagttattaatgtacaagggttgttttagaacaaaaaaagatacgtggacgaaaaccaaa 36621246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 25914609 - 25914523
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    ||||||||||||||||| |||| |||  ||||| |||||| |||||||| ||||||||| ||||||   ||| |||| ||||||||||    
T  25914609 acgggagggacgaaaataaaaaagttattaactaacaggggttgttttaaaacaaaaaa-gatacaaagacggaaacaaaaaacacgc 25914523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 335
Target Start/End: Complemental strand, 28592220 - 28592095
Alignment:
Q  210 tcagcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaa-aaaacgatacaggaacgaaa 308  Q
    ||||| ||||||||||| | | |||||  ||| || |||| |||||| ||| ||||||||| |||| |||||||||||| ||||  ||||||| ||||||    
T  28592220 tcagcgtttttgtaacagaagttaacgttaggaactaaaaccaaaacatttataacttacacggtt-gttttagaacaaaaaaaaaatacagggacgaaa 28592122  T
Q  309 accaaaaacacgcggacatacatggac 335  Q
    |  ||||||||||| || |||| ||||    
T  28592121 ataaaaaacacgcgaacttacaaggac 28592095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 28804839 - 28804907
Alignment:
Q  251 caaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacac 319  Q
    |||||||||| ||| ||| | ||||||||||| ||||||| | ||||||  || |||||||||||||||    
T  28804839 caaaacgtttataatttaaacggtttgttttaaaacaaaagaagatacatcaatgaaaaccaaaaacac 28804907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 30700437 - 30700327
Alignment:
Q  212 agcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaacc 311  Q
    ||||||||||||||| ||||| |||| |||||| |||| ||||| |||| ||||||||||||| ||||||||||||||||| |||||| | |||||||||    
T  30700437 agcatttttgtaacagatgctgacggcagggaccaaaagcaaaatgtttataacttacagggtgtgttttagaacaaaaaaagatacaaggacgaaaacc 30700338  T
Q  312 aaaaacacgcg 322  Q
    |||||||||||    
T  30700337 aaaaacacgcg 30700327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 41880071 - 41879958
Alignment:
Q  205 acacgtcagcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaac 304  Q
    |||| ||||||||||| ||||| ||||| | |||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||  ||    
T  41880071 acacatcagcatttttataacagatgctgatgggagg-acgaaaatcaaaacgtttataacttacaaggtttgttttagaacaaaaaaagatacagagac 41879973  T
Q  305 gaaaaccaaaaacac 319  Q
    |||||||||||||||    
T  41879972 gaaaaccaaaaacac 41879958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 236 - 342
Target Start/End: Original strand, 33734444 - 33734550
Alignment:
Q  236 gggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggac 335  Q
    |||||||||||||||||||| |||  |||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||  |  |||| ||||    
T  33734444 gggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacaggaaccaaaaccaaaaacacgctaaattacagggac 33734543  T
Q  336 gatttac 342  Q
    |||||||    
T  33734544 gatttac 33734550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 234 - 335
Target Start/End: Original strand, 31796774 - 31796875
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  |||||||||||| |||||||||||||||||| ||||| || |||||||||||||||||||| || |||| ||    
T  31796774 acgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacgcgaacttacaggg 31796873  T
Q  334 ac 335  Q
    ||    
T  31796874 ac 31796875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 53528089 - 53528002
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||||||||||||||||||||| |||  |||||||||||  |||||||||||||||||| |||||||| |||||||||||||||||||    
T  53528089 acgggagggacgaaaatcaaaaagttattaacttacaggagttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgc 53528002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 234 - 335
Target Start/End: Original strand, 40499192 - 40499293
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||||||||| |||  |||||||| ||| |||||||||||||||||| ||||| || |||||||||||||||||||| || |||| ||    
T  40499192 acgggagggacgaaaatcaaaaagttattaacttaccggggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacgcgaacttacaggg 40499291  T
Q  334 ac 335  Q
    ||    
T  40499292 ac 40499293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 234 - 335
Target Start/End: Complemental strand, 41081921 - 41081820
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||| |||||||||| |||||| |||   |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || |||| ||    
T  41081921 acggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgcgaacttacaggg 41081822  T
Q  334 ac 335  Q
    ||    
T  41081821 ac 41081820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 33733084 - 33732976
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||| ||||||||||||||| |||  ||||||| |||| ||||||||||||||||||  |||||||||||||||||||||||||||  |  |||| ||    
T  33733084 acgggaaggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaaaatacaggaacgaaaaccaaaaacacgccaaattacaggg 33732985  T
Q  334 acgatttac 342  Q
    |||||||||    
T  33732984 acgatttac 33732976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 322
Target Start/End: Original strand, 48568470 - 48568558
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcg 322  Q
    |||||||||||||||||||||| |||  |||||||||||| ||||||||||||||||||  |||| || ||||||||||||||||||||    
T  48568470 acgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaaaatacggggacgaaaaccaaaaacacgcg 48568558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 234 - 335
Target Start/End: Complemental strand, 31795492 - 31795391
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||| |||||||||| |||||| |||   |||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||| || |||| ||    
T  31795492 acggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggccgaaaaccaaaaacacgcgaacttacaggg 31795393  T
Q  334 ac 335  Q
    ||    
T  31795392 ac 31795391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 41083210 - 41083298
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaac-aaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||||||||||||||||||||| |||  |||||||||||| |||||||||||| |||||| ||||| || |||||||||||||||||||    
T  41083210 acgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaaagatacggggacgaaaaccaaaaacacgc 41083298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 48567115 - 48567028
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||| |||||||||| |||||| |||   |||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||    
T  48567115 acggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagtgacgaaaaccaaaaacacgc 48567028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 213 - 342
Target Start/End: Original strand, 53529453 - 53529582
Alignment:
Q  213 gcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaacca 312  Q
    |||||||||||||  | | | |||||||||||||||||||||| |||  ||||||| ||||  | ||||||||||||||| |||||||| |||||||| |    
T  53529453 gcatttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggctattttagaacaaaaaaagatacagggacgaaaacta 53529552  T
Q  313 aaaacacgcggacatacatggacgatttac 342  Q
    |||| ||||  |  |||| |||||||||||    
T  53529553 aaaatacgccaaattacagggacgatttac 53529582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 322
Target Start/End: Original strand, 30701763 - 30701868
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||||||| | |||  |||||| |||| || || | || ||||||||| | | ||||||||||||||||| |||||||| |||||||||||||    
T  30701763 tttttgtaacaaatgatgacgttagggaccaaaagcataaggcttataacttacatgatctgttttagaacaaaaaaagatacagg-acgaaaaccaaaa 30701861  T
Q  316 acacgcg 322  Q
    |||||||    
T  30701862 acacgcg 30701868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 342
Target Start/End: Complemental strand, 22942475 - 22942347
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaa--aaaacgatacaggaacgaaaaccaa 313  Q
    ||||||||||| ||| | ||||  ||||| |||| |||||||||| |||||||||  | ||||||||||||||  ||||  ||||||| | |||||||||    
T  22942475 tttttgtaacagatgatgacggatgggaccaaaaccaaaacgtttataacttacataggttgttttagaacaaaaaaaaatatacagggatgaaaaccaa 22942376  T
Q  314 aaacacgcggacatacatggacgatttac 342  Q
    ||||| ||| || |||| |||||||||||    
T  22942375 aaacaagcgaacttacagggacgatttac 22942347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 234 - 318
Target Start/End: Complemental strand, 31657073 - 31656988
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaa-aaaacgatacaggaacgaaaaccaaaaaca 318  Q
    |||||||||||||||| ||||| |||  |||||||||||| |||||||||||||| ||||  ||||| | ||||||||||||||||    
T  31657073 acgggagggacgaaaagcaaaaagttattaacttacagggattgttttagaacaaaaaaaaaatacaaggacgaaaaccaaaaaca 31656988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 32559009 - 32558937
Alignment:
Q  263 aacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggac 335  Q
    ||||||||| ||||||||| |||||||||| | |||||| |||||||| ||||||||||| || |||| ||||    
T  32559009 aacttacagagtttgttttcgaacaaaaaaagttacagggacgaaaacaaaaaacacgcgaacttacagggac 32558937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 322
Target Start/End: Complemental strand, 32613973 - 32613915
Alignment:
Q  263 aacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcg 322  Q
    |||||||||||||| |||||||||||||||   |||||| ||||||||||||||||||||    
T  32613973 aacttacagggtttattttagaacaaaaaa-actacagggacgaaaaccaaaaacacgcg 32613915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 335
Target Start/End: Original strand, 32615590 - 32615687
Alignment:
Q  239 agggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaac-aaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggac 335  Q
    |||||| |||||||||| |||   |||||||| | ||||||||||||| |||||| | |||||| || ||||| ||||||||||| || |||| ||||    
T  32615590 agggactaaaatcaaaaagttaacaacttacatgatttgttttagaacaaaaaaaagttacagggacaaaaacaaaaaacacgcgaacttacagggac 32615687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 9e-28; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 136 - 320
Target Start/End: Complemental strand, 1443642 - 1443450
Alignment:
Q  136 ggtccctgtaatctttcctggaaggacacataagcatgttttgccaagtcaaacaacgccacgtcagccac--------acgtcagcatttttgtaacaa 227  Q
    ||||||||||||||||||| ||| ||||||||||| |||||||||| ||||||||| | |||| |||||||        || ||| | ||||| ||||||    
T  1443642 ggtccctgtaatctttcctagaaagacacataagcctgttttgccacgtcaaacaatgtcacgccagccaccgttagacacatcaacgtttttttaacaa 1443543  T
Q  228 atgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacg 320  Q
    | | |||||  |||||| |||| ||||| |||   ||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  1443542 aagttaacgttagggactaaaaccaaaaagttaacaacttaccgggtttgttttagaacaaaaaaaaatacagggacgaaaaccaaaaacacg 1443450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 321
Target Start/End: Original strand, 8752722 - 8752827
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    |||||||||||||   | |||||||||||||||| ||||| |||  |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  8752722 tttttgtaacaaagtttgacgggagggacgaaaagcaaaaggttattaacttgcaggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 8752821  T
Q  316 acacgc 321  Q
    ||||||    
T  8752822 acacgc 8752827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 19084060 - 19084147
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||||||||||||||||||||| |||  |||| ||||||| |||||||||||||||||| |||||||| || ||||||||||||||||    
T  19084060 acgggagggacgaaaatcaaaaagttattaacatacaggggttgttttagaacaaaaaaagatacagggacaaaaaccaaaaacacgc 19084147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 8745551 - 8745443
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatgg 333  Q
    |||||||||||||||| ||||| |||  |||||||| ||| |||||||||||||||||| |||| ||| |||||||||||||||||||  |  |||| ||    
T  8745551 acgggagggacgaaaagcaaaaagttattaacttacgggggttgttttagaacaaaaaaagatatagggacgaaaaccaaaaacacgccaaattacaggg 8745452  T
Q  334 acgatttac 342  Q
    |||||||||    
T  8745451 acgatttac 8745443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 342
Target Start/End: Complemental strand, 1256854 - 1256725
Alignment:
Q  213 gcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaacca 312  Q
    |||||||||||||| |   | ||||||||||||||||  |||| |||  ||||||| |||| ||||||||||| |||||| |||||||| ||||||||||    
T  1256854 gcatttttgtaacagagtttgacgggagggacgaaaagtaaaaagttattaacttataggggttgttttagaataaaaaaagatacagggacgaaaacca 1256755  T
Q  313 aaaacacgcggacatacatggacgatttac 342  Q
    |||||||||  |  |||| |||||||||||    
T  1256754 aaaacacgccaaattacaaggacgatttac 1256725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 342
Target Start/End: Original strand, 1258379 - 1258488
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgt-aacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatg 332  Q
    |||||||||||||||| ||||| |||| | ||| || |||| |||||||||||||||||| |||||||| |||||||||||||||||||  |  |||| |    
T  1258379 acgggagggacgaaaagcaaaaagtttattaacctataggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacagg 1258478  T
Q  333 gacgatttac 342  Q
    ||||||||||    
T  1258479 gacgatttac 1258488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 332
Target Start/End: Complemental strand, 10699344 - 10699251
Alignment:
Q  239 agggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatg 332  Q
    |||||| ||||||||||||||| |||||||||| | |||||||||||||||||| |||||| ||| |||||  ||||||||||| || ||||||    
T  10699344 agggaccaaaatcaaaacgtttataacttacagaggttgttttagaacaaaaaaagatacatgaaggaaaataaaaaacacgcgaacttacatg 10699251  T

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Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 234 - 319
Target Start/End: Original strand, 2956175 - 2956260
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacac 319  Q
    |||||||||||||||| ||||| |||  |||||||| ||  |||||||||||||||||| |||||| | |||||||||||||||||    
T  2956175 acgggagggacgaaaagcaaaaagttattaacttacgggagttgttttagaacaaaaaaagatacaaggacgaaaaccaaaaacac 2956260  T

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Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 214 - 320
Target Start/End: Original strand, 4296326 - 4296431
Alignment:
Q  214 catttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaa 313  Q
    ||||||||||| | ||| | |||| | |||| |||| |||||||||| ||||||||| ||||| ||||||||||||||| |||||| |||||||||  ||    
T  4296326 catttttgtaatagatgatgacggcatggaccaaaaccaaaacgtttataacttacacggtttattttagaacaaaaaa-gatacatgaacgaaaataaa 4296424  T
Q  314 aaacacg 320  Q
    |||||||    
T  4296425 aaacacg 4296431  T

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Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 212 - 319
Target Start/End: Original strand, 33469717 - 33469825
Alignment:
Q  212 agcatttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttg-taacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaac 310  Q
    |||||||||||||||||||   |||  || ||| |||| ||||||||||  ||||||||||||| ||||||| ||||| ||| ||||||||||||||||     
T  33469717 agcatttttgtaacaaatgacgacgacagagaccaaaagcaaaacgttttataacttacagggtctgttttaaaacaagaaaagatacaggaacgaaaat 33469816  T
Q  311 caaaaacac 319  Q
     ||||||||    
T  33469817 aaaaaacac 33469825  T

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Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 10699891 - 10699967
Alignment:
Q  246 aaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcg 322  Q
    |||| |||||||||| ||||||||| || |||||||||||||||||| |||||| | || || || |||||||||||    
T  10699891 aaaaccaaaacgtttataacttacaagggttgttttagaacaaaaaaagatacatggacaaatacaaaaaacacgcg 10699967  T

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Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 19082785 - 19082713
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacga 306  Q
    |||||||||||||||||||||| |||  ||||||| | || |||||||||||||||||| | |||||| ||||    
T  19082785 acgggagggacgaaaatcaaaaagttattaacttatatgggttgttttagaacaaaaaaagttacagggacga 19082713  T

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Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 7678565 - 7678622
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacaggg 273  Q
    ||||||||||| | |||||||||||||||||||| |||||||||   |||||||||||    
T  7678565 tttttgtaacagaagctaacgggagggacgaaaagcaaaacgttaacaacttacaggg 7678622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 4496615 - 4496516
Alignment:
Q  241 ggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacgattt 340  Q
    |||| |||| ||||||| |  ||||||||| ||||||||||||||||||  |  ||||| | |||||||||||||||||| | || ||||  ||||||||    
T  4496615 ggaccaaaaccaaaacgatgataacttacatggtttgttttagaacaaatta--atacatggacgaaaaccaaaaacacgtgaacttacaatgacgattt 4496518  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 341
Target Start/End: Complemental strand, 10707786 - 10707688
Alignment:
Q  239 agggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgcggacatacatggacgat 338  Q
    |||||| |||| |||||||||| |||||||| ||| ||||| ||||| |||||    |||||| |||||||  ||||||||||| || |||| |||| ||    
T  10707786 agggaccaaaaccaaaacgtttataacttacgggggttgttatagaaaaaaaa----tacagggacgaaaataaaaaacacgcgaacttacagggacaat 10707691  T

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Target: scaffold1176 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 216 - 335
Target Start/End: Complemental strand, 2188 - 2069
Alignment:
Q  216 tttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaa 315  Q
    ||||||||||| | | |||||  |||||| |||| |||||||||| |||||||| ||| |||||||||||||||||| |||||||| ||| |||||||||    
T  2188 tttttgtaacagaagttaacgttagggactaaaaccaaaacgtttataacttacgggggttgttttagaacaaaaaaagatacagggacggaaaccaaaa 2089  T
Q  316 acacgcggacatacatggac 335  Q
    ||||||| || |||| ||||    
T  2088 acacgcgaacttacaaggac 2069  T

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Target: scaffold1118 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold1118
Description:

Target: scaffold1118; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 214 - 335
Target Start/End: Complemental strand, 2551 - 2430
Alignment:
Q  214 catttttgtaacaaatgctaacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaa 313  Q
    ||||||||||||| | | |||||  |||||| |||| |||||||  | |||||||||||| |||||||| || |||||| |||| ||| |||||||||||    
T  2551 catttttgtaacagaagttaacgttagggactaaaaccaaaacgcgtataacttacaggggttgttttaaaataaaaaaagatatagggacgaaaaccaa 2452  T
Q  314 aaacacgcggacatacatggac 335  Q
    ||||||||| || |||| ||||    
T  2451 aaacacgcgaacttacagggac 2430  T

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Target: scaffold0633 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 6834 - 6921
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    ||||||| |||||||| ||||| |||  |||||||||| | ||||||||||||||||||  ||||||  |||||||||||||||||||    
T  6834 acgggagagacgaaaagcaaaaagttattaacttacagaggttgttttagaacaaaaaaatatacagagacgaaaaccaaaaacacgc 6921  T

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Target: scaffold0489 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0489
Description:

Target: scaffold0489; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 6755 - 6842
Alignment:
Q  234 acgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaacgatacaggaacgaaaaccaaaaacacgc 321  Q
    |||||||||  ||||||||||| |||  |||| |||||||  | ||||||||||||||| ||||||||||| ||||||||||||||||    
T  6755 acgggagggtagaaaatcaaaaagttattaacatacaggggatattttagaacaaaaaaagatacaggaacaaaaaccaaaaacacgc 6842  T

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Target: scaffold0280 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 263 - 322
Target Start/End: Complemental strand, 12222 - 12162
Alignment:
Q  263 aacttacagggtttgttttagaac-aaaaaacgatacaggaacgaaaaccaaaaacacgcg 322  Q
    |||||||||||||||||||||||  |||||| |||||||| ||||||||||||||||||||    
T  12222 aacttacagggtttgttttagaaagaaaaaaagatacagggacgaaaaccaaaaacacgcg 12162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 291
Target Start/End: Original strand, 475 - 526
Alignment:
Q  240 gggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaa 291  Q
    ||||| |||| |||||||||| ||||||||||||| ||||||||||||||||    
T  475 gggaccaaaaccaaaacgtttataacttacagggtctgttttagaacaaaaa 526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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