View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17465_high_4 (Length: 404)

Name: NF17465_high_4
Description: NF17465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17465_high_4
NF17465_high_4
[»] chr5 (11 HSPs)
chr5 (14-387)||(1744757-1745124)
chr5 (14-387)||(1739414-1739784)
chr5 (167-387)||(1725212-1725429)
chr5 (77-231)||(1744649-1744803)
chr5 (77-240)||(1739306-1739469)
chr5 (77-217)||(1724717-1724857)
chr5 (79-227)||(1724857-1725005)
chr5 (190-335)||(1715552-1715700)
chr5 (89-200)||(1760559-1760670)
chr5 (15-61)||(1715658-1715704)
chr5 (258-326)||(1760718-1760786)
[»] chr3 (6 HSPs)
chr3 (77-297)||(3167534-3167739)
chr3 (81-297)||(2023090-2023306)
chr3 (196-342)||(3156507-3156653)
chr3 (196-297)||(3138820-3138921)
chr3 (25-62)||(3156616-3156653)
chr3 (25-62)||(3167638-3167675)
[»] chr7 (5 HSPs)
chr7 (190-320)||(7490802-7490926)
chr7 (170-231)||(9011746-9011807)
chr7 (90-153)||(7484206-7484269)
chr7 (14-60)||(9011746-9011792)
chr7 (17-62)||(7490883-7490928)
[»] chr8 (1 HSPs)
chr8 (196-297)||(23852503-23852607)


Alignment Details
Target: chr5 (Bit Score: 347; Significance: 0; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 14 - 387
Target Start/End: Original strand, 1744757 - 1745124
Alignment:
Q  14 aattctaggatttggtggtgcaattacttcaaggattgaagatggtacacatagcagaattagtggccctttagggtatggtaatggtgctttatgtttg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||    
T  1744757 aattctaggatttggtggtgcaattacttcaaggattgaagatggtacacatagcagaattagtggccctt------atggtaatggtgctttatgtttg 1744850  T
Q  114 aaagatatatcaaacccttcactttttagtttgagaaatacgaagggtagcaatagtaatagtgggactggaattttaggatttggtggtgcaactgctt 213  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1744851 aaagatatattaaacccttcactttttagtttgagaaatacgaagggtagcaatagtaatagtgggactggaattttaggatttggtggtgcaactgctt 1744950  T
Q  214 caaggattgaagatggtatgaataacaagattggtgctattactaaatttggagattcttctacaaatgttgccacaagttcaagcacaatcataaacaa 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1744951 caaggattgaagatggtatgaataacaagattggtgctattactaaatttggagattcttctacaaatgttgccacaagttcaagcacaatcataaacaa 1745050  T
Q  314 taaaaatagtgtggatcctactactaccagcaaggatgatattgatttgtcgaagttcaacgcagaagaagaat 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1745051 taaaaatagtgtggatcctactactaccagcaaggatgatattgatttgtcgaagttcaacgcagaagaagaat 1745124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 14 - 387
Target Start/End: Original strand, 1739414 - 1739784
Alignment:
Q  14 aattctaggatttggtggtgcaattacttcaaggattgaagatggtacacatagcagaattagtggccctttagggtatggtaatggtgctttatgtttg 113  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||| |||| |||||||||||||||||||||||||||||||    
T  1739414 aattctaggatttggtggttcaactacttcaaggattgaagatggtacaaataacagaattaggggccatttagggtatggtaatggtgctttatgtttg 1739513  T
Q  114 aaagatatatcaaacccttcactttttagtttgagaaatacgaagggtagcaatagtaatagtgggactggaattttaggatttggtggtgcaactgctt 213  Q
    |||||||||| ||||||||| ||| ||||||||||||||| | ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  1739514 aaagatatattaaacccttcgcttgttagtttgagaaatatggagggtagcaatagtaatagtggggctggaattctaggatttggtggtgcaactgctt 1739613  T
Q  214 caaggattgaagatggtatgaataacaagattggtgctattactaaatttggagattcttctacaaatgttgccacaagttcaagcacaatcataaacaa 313  Q
    | |||||||||||||||| |||| ||||||||||||||||||  |||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  1739614 cgaggattgaagatggtacgaatgacaagattggtgctattataaaatctggagattcttctacaaatgttgctacaagttcaagtacaatcataaacaa 1739713  T
Q  314 taaaaatagtgtggatcctactactaccagcaaggatgatattgatttgtcgaagttcaacgcagaagaagaat 387  Q
    ||||||||||| ||||| |||||||||   ||||||| |||||||| |||| ||||| ||| | ||||||||||    
T  1739714 taaaaatagtgaggatcatactactac---caaggataatattgatctgtctaagtttaactcggaagaagaat 1739784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 167 - 387
Target Start/End: Original strand, 1725212 - 1725429
Alignment:
Q  167 tagtaatagtgggactggaattttaggatttggtggtgcaactgcttcaaggattgaagatggtatgaataacaagattggtgctattactaaatttgga 266  Q
    |||| ||| |||| |||||||| ||||  ||||||||| |||| ||||||||||||||||||  |  ||||| || ||||||||||||  |||||  |||    
T  1725212 tagttataatggggctggaattctaggtattggtggtggaactacttcaaggattgaagatgacacaaataataaaattggtgctatttttaaatgggga 1725311  T
Q  267 gattcttctacaaatgttgccacaagttcaagcacaatcataaacaataaaaatagtgtggatcctactactaccagcaaggatgatattgatttgtcga 366  Q
    |||||||||| | ||||||| |||||||||| | |||||||||| |||||||||| ||||||   | ||||||||| |||||||||||||||| ||||||    
T  1725312 gattcttctaaacatgttgctacaagttcaaacgcaatcataaaaaataaaaatattgtgga---tgctactaccaccaaggatgatattgatatgtcga 1725408  T
Q  367 agttcaacgcagaagaagaat 387  Q
    ||||||| || ||||||||||    
T  1725409 agttcaaagctgaagaagaat 1725429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 77 - 231
Target Start/End: Original strand, 1744649 - 1744803
Alignment:
Q  77 tggccctttagggtatggtaatggtgctttatgtttgaaagatatatcaaacccttcactttttagtttgagaaatacgaagggtagcaatagtaatagt 176  Q
    ||||||||| | |||| ||||||||| |||   ||| |||||||||| ||| ||||| ||| ||||||||||||| | | || |||| ||||||||| ||    
T  1744649 tggcccttttgagtatagtaatggtgattttcatttaaaagatatattaaatccttctcttattagtttgagaaacatggagagtagtaatagtaatcgt 1744748  T
Q  177 gggactggaattttaggatttggtggtgcaactgcttcaaggattgaagatggta 231  Q
    |||   |||||| |||||||||||||||||| | |||||||||||||||||||||    
T  1744749 ggggtaggaattctaggatttggtggtgcaattacttcaaggattgaagatggta 1744803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 77 - 240
Target Start/End: Original strand, 1739306 - 1739469
Alignment:
Q  77 tggccctttagggtatggtaatggtgctttatgtttgaaagatatatcaaacccttcactttttagtttgagaaatacgaagggtagcaatagtaatagt 176  Q
    ||||||||| | |||| ||||||||| |||   |||||||||||||| ||| ||||| ||| || |||||||||| | | || |||| ||||||||  ||    
T  1739306 tggcccttttgagtatagtaatggtgatttgcatttgaaagatatattaaatccttctcttgttggtttgagaaacatggagagtagtaatagtaaccgt 1739405  T
Q  177 gggactggaattttaggatttggtggtgcaactgcttcaaggattgaagatggtatgaataaca 240  Q
    |||   |||||| |||||||||||||| ||||| |||||||||||||||||||||  |||||||    
T  1739406 ggggtgggaattctaggatttggtggttcaactacttcaaggattgaagatggtacaaataaca 1739469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 217
Target Start/End: Original strand, 1724717 - 1724857
Alignment:
Q  77 tggccctttagggtatggtaatggtgctttatgtttgaaagatatatcaaacccttcactttttagtttgagaaatacgaagggtagcaatagtaatagt 176  Q
    ||||||||| ||||||  ||||||||||||  ||||| |||| || | ||||||||| ||| ||||||||||||||| | ||||||| |||| |||||||    
T  1724717 tggcccttttgggtataataatggtgctttgggtttgcaagagatgttaaacccttctcttgttagtttgagaaatatggagggtagtaataataatagt 1724816  T
Q  177 gggactggaattttaggatttggtggtgcaactgcttcaag 217  Q
    ||   ||| ||| ||||  ||||||||| |||| |||||||    
T  1724817 ggagttgggattctaggtattggtggtggaactacttcaag 1724857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 227
Target Start/End: Original strand, 1724857 - 1725005
Alignment:
Q  79 gccctttagggtatggtaatggtgctttatgtttgaaagatatatcaaacccttcactttttagtttgagaaatacgaagggtagcaatagtaatagtgg 178  Q
    ||||||| |||||| |||||||| ||||  ||||| |||| || | |||||||||  || ||||||||| ||||| | ||||||| ||||||| ||||||    
T  1724857 gcccttttgggtatagtaatggtactttgggtttgcaagagatgttaaacccttcttttgttagtttgaaaaatatggagggtagtaatagtactagtgg 1724956  T
Q  179 gactggaattttaggatttggtggtgcaactgcttcaaggattgaagat 227  Q
       |||  || ||||  ||||||||| ||||||||||||||||||||||    
T  1724957 agttggggttctaggtattggtggtggaactgcttcaaggattgaagat 1725005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 335
Target Start/End: Complemental strand, 1715700 - 1715552
Alignment:
Q  190 taggatttggtggtgcaactgcttcaaggattgaagatggtatgaataacaagattggtgctattactaaatttggagattc---ttctacaaatgttgc 286  Q
    |||||||||| ||||||| |  ||||| ||||||||||||||  |||||||| ||||| | | |||  ||||||||||||||   |||| |||| |||||    
T  1715700 taggatttgggggtgcaattatttcaaagattgaagatggtaccaataacaaaattggagttcttataaaatttggagattcttcttctgcaaacgttgc 1715601  T
Q  287 cacaagttcaagcacaatcataaacaataaaaatagtgtggatcctact 335  Q
     | ||||||||   ||||||| || ||||||||||| ||||||||||||    
T  1715600 tataagttcaaattcaatcatgaaaaataaaaatagcgtggatcctact 1715552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 200
Target Start/End: Original strand, 1760559 - 1760670
Alignment:
Q  89 gtatggtaatggtgctttatgtttgaaagatatatcaaacccttcactttttagtttgagaaatacgaagggtagcaatagtaatagtgggactggaatt 188  Q
    |||| ||||||||| |||  |||||||||| |||| ||||||||| ||| ||||| ||||||||    ||||| | ||||||||||||||| ||| || |    
T  1760559 gtatagtaatggtgttttgagtttgaaagagatattaaacccttctcttgttagtctgagaaattttgagggttgtaatagtaatagtggggctgaaaat 1760658  T
Q  189 ttaggatttggt 200  Q
    ||||||||||||    
T  1760659 ttaggatttggt 1760670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 1715704 - 1715658
Alignment:
Q  15 attctaggatttggtggtgcaattacttcaaggattgaagatggtac 61  Q
    |||||||||||||| |||||||||| ||||| |||||||||||||||    
T  1715704 attctaggatttgggggtgcaattatttcaaagattgaagatggtac 1715658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 326
Target Start/End: Original strand, 1760718 - 1760786
Alignment:
Q  258 aaatttggagattcttctacaaatgttgccacaagttcaagcacaatcataaacaataaaaatagtgtg 326  Q
    ||||| ||| |||||||||||||| |||  |||||||||| | |||||||| |||||||||||| ||||    
T  1760718 aaattcggatattcttctacaaatattgatacaagttcaaactcaatcatacacaataaaaataatgtg 1760786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 7e-25; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 77 - 297
Target Start/End: Original strand, 3167534 - 3167739
Alignment:
Q  77 tggccctttagggtatggtaatggtgctttatgtttgaaagatatatcaaacccttcactttttagtttgagaaatacgaagggtagcaatagtaatagt 176  Q
    ||||||||| ||||||| |||||||||||||| |||| |||| |||| ||||||||||||| ||||||||||||||| |||               |  |    
T  3167534 tggcccttttgggtatgataatggtgctttatctttgcaagagatattaaacccttcacttgttagtttgagaaataagaa---------------tcat 3167618  T
Q  177 gggactggaattttaggatttggtggtgcaactgcttcaaggattgaagatggtatgaataacaagattggtgctattactaaatttggagattcttcta 276  Q
    |||  ||||||| | ||  |||||||||||| | |||||||||| ||||||||||  ||||| || ||||||||||||   ||||| |||||||||||||    
T  3167619 ggggttggaattcttggtattggtggtgcaagtacttcaaggatagaagatggtacaaataataaaattggtgctattctaaaattaggagattcttcta 3167718  T
Q  277 caaatgttgccacaagttcaa 297  Q
    |||||||||| ||||||||||    
T  3167719 caaatgttgctacaagttcaa 3167739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 81 - 297
Target Start/End: Original strand, 2023090 - 2023306
Alignment:
Q  81 cctttagggtatggtaatggtgctttatgtttgaaagatatatcaaacccttcactttttagtttgagaaatacgaagggtagcaatagtaatagtggga 180  Q
    ||||| |||||||||||||||| |||  ||||| |||| |||| ||||||||| ||| ||||||||||||||| | |||| || |||||||||  | ||     
T  2023090 ccttttgggtatggtaatggtggtttgggtttgcaagagatattaaacccttctcttgttagtttgagaaatatggagggcagtaatagtaattctaggg 2023189  T
Q  181 ctggaattttaggatttggtggtgcaactgcttcaaggattgaagatggtatgaataacaagattggtgctattactaaa-tttggagattcttctacaa 279  Q
     ||||||| ||||    || | ||||||| ||| ||||||||||||||||   ||||| || |||||| ||| | ||||| |||| ||||||||||||||    
T  2023190 ttggaattctaggtaccggggatgcaactactttaaggattgaagatggtgaaaataataaaattggtactaat-ctaaagtttgaagattcttctacaa 2023288  T
Q  280 atgttgccacaagttcaa 297  Q
    ||||| | ||||||||||    
T  2023289 atgttacaacaagttcaa 2023306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 3156653 - 3156507
Alignment:
Q  196 ttggtggtgcaactgcttcaaggattgaagatggtatgaataacaagattggtgctattactaaatttggagattcttctacaaatgttgccacaagttc 295  Q
    |||||||||||| | |||||||||||||||||||||  ||||| || || |||||||||   ||||| |||||||||||||||||||||||  |||||||    
T  3156653 ttggtggtgcaagtacttcaaggattgaagatggtacaaataataaaataggtgctattctaaaattaggagattcttctacaaatgttgctgcaagttc 3156554  T
Q  296 aagcacaatcataaacaataaaaatagtgtggatcctactactacca 342  Q
    || | ||| |||| | ||  ||| || ||||| ||||||| ||||||    
T  3156553 aaactcaaacatagaaaagcaaattattgtggctcctacttctacca 3156507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 297
Target Start/End: Complemental strand, 3138921 - 3138820
Alignment:
Q  196 ttggtggtgcaactgcttcaaggattgaagatggtatgaataacaagattggtgctattactaaatttggagattcttctacaaatgttgccacaagttc 295  Q
    |||||||||||||| |||||| ||| ||| ||||||   |||| || ||||||||||||    |||| ||||||||||||||||| ||||| |||| |||    
T  3138921 ttggtggtgcaactacttcaaagatcgaatatggtacatataataaaattggtgctattttagaattgggagattcttctacaaaggttgctacaatttc 3138822  T
Q  296 aa 297  Q
    ||    
T  3138821 aa 3138820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 3156653 - 3156616
Alignment:
Q  25 ttggtggtgcaattacttcaaggattgaagatggtaca 62  Q
    |||||||||||| |||||||||||||||||||||||||    
T  3156653 ttggtggtgcaagtacttcaaggattgaagatggtaca 3156616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 3167638 - 3167675
Alignment:
Q  25 ttggtggtgcaattacttcaaggattgaagatggtaca 62  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  3167638 ttggtggtgcaagtacttcaaggatagaagatggtaca 3167675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 320
Target Start/End: Complemental strand, 7490926 - 7490802
Alignment:
Q  190 taggatttggtggtgcaactgcttcaaggattgaagatggtatgaataacaagattggtgctattactaaatttggagattcttctacaaatgttgccac 289  Q
    |||| |||||||| |||| | ||||||| |||||||||||||  ||||| || ||||||||||||   ||| |||||||||||||||      |||| ||    
T  7490926 taggttttggtggagcaagtacttcaagaattgaagatggtacaaataataaaattggtgctattctaaaacttggagattcttcta------ttgctac 7490833  T
Q  290 aagttcaagcacaatcataaacaataaaaat 320  Q
    |||||||||| ||| || |||||| ||||||    
T  7490832 aagttcaagctcaaacacaaacaagaaaaat 7490802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 9011807 - 9011746
Alignment:
Q  170 taatagtgggactggaattttaggatttggtggtgcaactgcttcaaggattgaagatggta 231  Q
    |||||| ||| |||||||| |||| |||||||||||||||  ||||| ||||||||||||||    
T  9011807 taatagaggggctggaattctagggtttggtggtgcaactagttcaaagattgaagatggta 9011746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 7484269 - 7484206
Alignment:
Q  90 tatggtaatggtgctttatgtttgaaagatatatcaaacccttcactttttagtttgagaaata 153  Q
    |||||| ||||||||||  ||||||| ||| ||| | ||||||||||||||| |||||||||||    
T  7484269 tatggttatggtgctttgcgtttgaatgatgtattacacccttcactttttaatttgagaaata 7484206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 9011792 - 9011746
Alignment:
Q  14 aattctaggatttggtggtgcaattacttcaaggattgaagatggta 60  Q
    ||||||||| ||||||||||||| || ||||| ||||||||||||||    
T  9011792 aattctagggtttggtggtgcaactagttcaaagattgaagatggta 9011746  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 7490928 - 7490883
Alignment:
Q  17 tctaggatttggtggtgcaattacttcaaggattgaagatggtaca 62  Q
    |||||| |||||||| |||| ||||||||| |||||||||||||||    
T  7490928 tctaggttttggtggagcaagtacttcaagaattgaagatggtaca 7490883  T

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Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 23852503 - 23852607
Alignment:
Q  196 ttggtggtgcaactgcttcaaggattgaagatggtatgaataacaaga---ttggtgctattactaaatttggagattcttctacaaatgttgccacaag 292  Q
    |||| ||||||||| ||||||| || ||||||||||  ||||| || |   |||||||||||   ||||| |||||||||||||||||| |||| |||||    
T  23852503 ttggcggtgcaactacttcaagaatcgaagatggtacaaataataataaaattggtgctattttaaaattgggagattcttctacaaatattgctacaag 23852602  T
Q  293 ttcaa 297  Q
    |||||    
T  23852603 ttcaa 23852607  T

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