View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17465_low_6 (Length: 357)

Name: NF17465_low_6
Description: NF17465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17465_low_6
NF17465_low_6
[»] chr3 (43 HSPs)
chr3 (88-339)||(45206785-45207034)
chr3 (1-83)||(7459993-7460075)
chr3 (1-90)||(18659051-18659140)
chr3 (1-91)||(43137849-43137939)
chr3 (1-82)||(8559178-8559259)
chr3 (1-82)||(38833671-38833752)
chr3 (215-339)||(45203302-45203424)
chr3 (4-89)||(54840304-54840389)
chr3 (1-89)||(37832900-37832988)
chr3 (1-80)||(51062399-51062478)
chr3 (1-79)||(51392465-51392543)
chr3 (3-89)||(52668660-52668746)
chr3 (1-90)||(1327310-1327399)
chr3 (1-74)||(45167314-45167387)
chr3 (1-89)||(21906996-21907084)
chr3 (2-90)||(34827321-34827409)
chr3 (1-83)||(10571317-10571399)
chr3 (1-82)||(46483558-46483639)
chr3 (1-89)||(38492052-38492140)
chr3 (1-83)||(49057862-49057944)
chr3 (1-89)||(27848952-27849040)
chr3 (1-89)||(29728271-29728359)
chr3 (1-89)||(48707016-48707104)
chr3 (1-91)||(15503023-15503113)
chr3 (1-90)||(53066374-53066462)
chr3 (1-89)||(25097360-25097448)
chr3 (1-64)||(28690541-28690604)
chr3 (1-64)||(32285349-32285412)
chr3 (2-61)||(45093748-45093807)
chr3 (1-89)||(32951309-32951397)
chr3 (1-91)||(3547593-3547683)
chr3 (1-89)||(10435134-10435222)
chr3 (1-61)||(35718028-35718088)
chr3 (1-64)||(7671486-7671549)
chr3 (1-64)||(9145527-9145590)
chr3 (1-62)||(4238793-4238854)
chr3 (4-61)||(10437310-10437367)
chr3 (1-62)||(17052891-17052952)
chr3 (1-83)||(47638061-47638143)
chr3 (1-58)||(36665050-36665107)
chr3 (285-330)||(45211799-45211844)
chr3 (30-90)||(16365449-16365509)
chr3 (9-89)||(52550797-52550877)
[»] chr5 (38 HSPs)
chr5 (1-92)||(29627265-29627356)
chr5 (1-89)||(35448170-35448258)
chr5 (1-92)||(38697960-38698051)
chr5 (1-89)||(23988579-23988667)
chr5 (1-89)||(40512853-40512941)
chr5 (1-89)||(42148307-42148395)
chr5 (3-89)||(32334815-32334901)
chr5 (1-88)||(5364421-5364508)
chr5 (1-91)||(39894779-39894869)
chr5 (1-91)||(5213095-5213185)
chr5 (1-91)||(32002187-32002277)
chr5 (1-91)||(37843748-37843838)
chr5 (1-90)||(4925011-4925100)
chr5 (1-90)||(35290285-35290374)
chr5 (1-89)||(37516144-37516232)
chr5 (1-82)||(14475407-14475488)
chr5 (1-90)||(39036409-39036498)
chr5 (1-89)||(41411331-41411419)
chr5 (1-82)||(43517233-43517314)
chr5 (1-89)||(1830654-1830742)
chr5 (1-89)||(16048083-16048171)
chr5 (1-89)||(40316121-40316209)
chr5 (1-64)||(19889679-19889742)
chr5 (1-62)||(4300005-4300066)
chr5 (1-62)||(42421712-42421773)
chr5 (5-89)||(30779922-30780006)
chr5 (4-83)||(43067235-43067314)
chr5 (1-62)||(970165-970226)
chr5 (1-62)||(22613882-22613943)
chr5 (1-61)||(15268138-15268198)
chr5 (1-89)||(39405764-39405852)
chr5 (1-60)||(21961256-21961315)
chr5 (30-91)||(16954688-16954749)
chr5 (1-61)||(19868858-19868918)
chr5 (1-56)||(24520242-24520296)
chr5 (1-60)||(32300599-32300658)
chr5 (6-64)||(25563525-25563583)
chr5 (4-61)||(19087946-19088003)
[»] chr2 (37 HSPs)
chr2 (1-90)||(18718238-18718327)
chr2 (1-90)||(14372076-14372165)
chr2 (1-90)||(23671375-23671464)
chr2 (1-92)||(40425422-40425513)
chr2 (1-91)||(42038521-42038611)
chr2 (1-90)||(34826911-34827000)
chr2 (1-89)||(27559575-27559663)
chr2 (4-83)||(14707710-14707789)
chr2 (1-94)||(4045406-4045499)
chr2 (1-90)||(41172930-41173019)
chr2 (1-89)||(3987405-3987493)
chr2 (1-91)||(20517417-20517507)
chr2 (1-74)||(44330399-44330472)
chr2 (1-89)||(7443064-7443152)
chr2 (1-89)||(44283452-44283540)
chr2 (1-88)||(41463690-41463777)
chr2 (1-83)||(16941984-16942066)
chr2 (1-83)||(17012649-17012731)
chr2 (1-90)||(9877256-9877345)
chr2 (1-90)||(30708727-30708816)
chr2 (1-90)||(32776073-32776162)
chr2 (11-82)||(38588072-38588143)
chr2 (1-74)||(36199124-36199197)
chr2 (1-89)||(40598128-40598216)
chr2 (4-62)||(4083234-4083292)
chr2 (1-90)||(38963518-38963607)
chr2 (5-62)||(38137707-38137764)
chr2 (1-62)||(40898667-40898728)
chr2 (1-80)||(24283131-24283210)
chr2 (1-39)||(30776366-30776404)
chr2 (1-38)||(43925254-43925291)
chr2 (19-82)||(5030462-5030525)
chr2 (1-35)||(332330-332364)
chr2 (4-62)||(42951367-42951425)
chr2 (1-62)||(39418193-39418254)
chr2 (1-61)||(4045878-4045938)
chr2 (1-61)||(13399278-13399338)
[»] chr8 (31 HSPs)
chr8 (1-89)||(45081812-45081900)
chr8 (1-92)||(38845197-38845288)
chr8 (1-89)||(29790942-29791030)
chr8 (1-91)||(40013649-40013739)
chr8 (1-90)||(30289923-30290012)
chr8 (1-92)||(3293275-3293366)
chr8 (4-83)||(43066133-43066212)
chr8 (1-91)||(2805649-2805739)
chr8 (1-90)||(37709898-37709987)
chr8 (1-89)||(1580938-1581026)
chr8 (1-89)||(38739657-38739745)
chr8 (1-92)||(30380527-30380618)
chr8 (1-81)||(6470853-6470933)
chr8 (1-89)||(13138305-13138393)
chr8 (1-90)||(8351053-8351142)
chr8 (1-91)||(2986337-2986426)
chr8 (1-83)||(23248783-23248865)
chr8 (1-89)||(39361128-39361213)
chr8 (1-91)||(44123671-44123761)
chr8 (1-61)||(12893559-12893619)
chr8 (1-92)||(14522377-14522468)
chr8 (3-64)||(9302528-9302589)
chr8 (1-89)||(23764624-23764713)
chr8 (1-61)||(31127978-31128038)
chr8 (1-64)||(886240-886303)
chr8 (1-91)||(45253747-45253838)
chr8 (1-50)||(18809315-18809364)
chr8 (1-62)||(25256361-25256422)
chr8 (1-62)||(11854551-11854612)
chr8 (4-89)||(14847210-14847295)
chr8 (1-61)||(10658006-10658066)
[»] chr4 (53 HSPs)
chr4 (1-92)||(3901312-3901403)
chr4 (1-91)||(46212523-46212613)
chr4 (1-90)||(46803630-46803719)
chr4 (1-89)||(5744256-5744344)
chr4 (1-83)||(6494594-6494676)
chr4 (1-90)||(5735270-5735359)
chr4 (1-90)||(28166273-28166362)
chr4 (1-90)||(45198513-45198602)
chr4 (1-90)||(47579286-47579375)
chr4 (1-89)||(3442517-3442605)
chr4 (1-89)||(21859092-21859180)
chr4 (1-89)||(21914955-21915043)
chr4 (1-91)||(26205877-26205967)
chr4 (1-89)||(4264134-4264222)
chr4 (1-89)||(39786529-39786617)
chr4 (1-92)||(28151988-28152079)
chr4 (1-83)||(37688206-37688288)
chr4 (1-83)||(49768451-49768533)
chr4 (1-82)||(7738992-7739073)
chr4 (1-83)||(20678760-20678842)
chr4 (1-89)||(18360146-18360234)
chr4 (1-89)||(36602694-36602782)
chr4 (1-93)||(55190887-55190979)
chr4 (1-89)||(4209363-4209451)
chr4 (1-89)||(23255935-23256023)
chr4 (1-72)||(1377049-1377120)
chr4 (4-63)||(53568380-53568439)
chr4 (1-91)||(50033018-50033108)
chr4 (1-91)||(50035537-50035627)
chr4 (1-90)||(5123330-5123419)
chr4 (1-90)||(19634021-19634110)
chr4 (1-92)||(19652428-19652519)
chr4 (1-64)||(19731338-19731401)
chr4 (4-70)||(19525890-19525956)
chr4 (5-91)||(51737130-51737216)
chr4 (1-58)||(3443560-3443617)
chr4 (1-62)||(6923113-6923174)
chr4 (1-90)||(19170712-19170801)
chr4 (1-58)||(19631339-19631396)
chr4 (1-62)||(25644386-25644447)
chr4 (6-61)||(23603825-23603880)
chr4 (1-64)||(26659865-26659928)
chr4 (1-80)||(39260304-39260383)
chr4 (19-89)||(39195672-39195742)
chr4 (6-67)||(55014284-55014345)
chr4 (1-61)||(42187152-42187212)
chr4 (1-57)||(55997146-55997202)
chr4 (1-60)||(39193941-39194000)
chr4 (1-61)||(51736822-51736882)
chr4 (1-60)||(10181017-10181076)
chr4 (30-64)||(14958033-14958067)
chr4 (1-58)||(50971491-50971547)
chr4 (2-38)||(27976744-27976780)
[»] chr7 (32 HSPs)
chr7 (1-89)||(36819696-36819784)
chr7 (1-90)||(32619115-32619204)
chr7 (1-89)||(19072769-19072857)
chr7 (1-89)||(42086811-42086899)
chr7 (1-83)||(44479893-44479975)
chr7 (1-90)||(2400284-2400373)
chr7 (1-82)||(23474142-23474223)
chr7 (1-90)||(28185581-28185670)
chr7 (1-90)||(37951118-37951207)
chr7 (1-89)||(47080980-47081068)
chr7 (1-89)||(47713675-47713763)
chr7 (4-89)||(31466534-31466619)
chr7 (1-90)||(36859381-36859470)
chr7 (1-89)||(36905526-36905614)
chr7 (1-88)||(31110625-31110710)
chr7 (1-89)||(34478184-34478272)
chr7 (4-90)||(4612263-4612349)
chr7 (4-89)||(42834468-42834553)
chr7 (1-61)||(48531350-48531410)
chr7 (26-89)||(47713777-47713840)
chr7 (1-62)||(21392045-21392106)
chr7 (1-61)||(10464288-10464348)
chr7 (1-89)||(37231737-37231825)
chr7 (1-67)||(31497876-31497942)
chr7 (1-86)||(4033294-4033379)
chr7 (1-89)||(35500920-35501008)
chr7 (1-80)||(47537932-47538011)
chr7 (1-50)||(36643201-36643250)
chr7 (14-64)||(38198506-38198556)
chr7 (1-55)||(39982287-39982341)
chr7 (1-90)||(40348409-40348498)
chr7 (4-60)||(42493806-42493862)
[»] chr6 (16 HSPs)
chr6 (1-89)||(643604-643692)
chr6 (1-89)||(31854818-31854906)
chr6 (1-91)||(24150739-24150829)
chr6 (1-74)||(22020291-22020364)
chr6 (1-89)||(8796050-8796138)
chr6 (1-89)||(11114565-11114653)
chr6 (1-89)||(29403644-29403732)
chr6 (1-89)||(33121542-33121630)
chr6 (1-64)||(29986331-29986394)
chr6 (1-91)||(25435410-25435499)
chr6 (1-89)||(13207126-13207214)
chr6 (1-89)||(18991904-18991992)
chr6 (1-83)||(20662232-20662315)
chr6 (1-62)||(7098046-7098107)
chr6 (1-89)||(30237165-30237254)
chr6 (2-50)||(25163203-25163251)
[»] chr1 (38 HSPs)
chr1 (1-89)||(25531778-25531866)
chr1 (1-89)||(48219815-48219903)
chr1 (1-92)||(50539257-50539348)
chr1 (1-91)||(39354437-39354527)
chr1 (1-89)||(32988522-32988610)
chr1 (1-89)||(48264984-48265072)
chr1 (1-89)||(52378989-52379077)
chr1 (1-89)||(50876364-50876452)
chr1 (1-83)||(38458735-38458817)
chr1 (4-88)||(49805428-49805512)
chr1 (1-92)||(3529173-3529264)
chr1 (1-91)||(23569847-23569937)
chr1 (1-91)||(30529223-30529313)
chr1 (1-90)||(32565745-32565834)
chr1 (1-74)||(42708519-42708592)
chr1 (4-83)||(45235021-45235100)
chr1 (4-70)||(47222233-47222299)
chr1 (1-78)||(29161853-29161930)
chr1 (4-62)||(1849726-1849784)
chr1 (1-83)||(16266168-16266250)
chr1 (2-64)||(16751627-16751689)
chr1 (1-79)||(37281102-37281180)
chr1 (1-91)||(50481276-50481366)
chr1 (1-62)||(16265060-16265121)
chr1 (1-62)||(26441664-26441725)
chr1 (3-64)||(38738153-38738214)
chr1 (3-64)||(48376183-48376244)
chr1 (1-89)||(43680069-43680157)
chr1 (4-83)||(4605004-4605083)
chr1 (6-60)||(14075764-14075818)
chr1 (1-62)||(24982378-24982439)
chr1 (1-62)||(31971560-31971621)
chr1 (1-89)||(3898744-3898832)
chr1 (1-61)||(31698761-31698821)
chr1 (1-42)||(23330499-23330540)
chr1 (1-60)||(27990887-27990945)
chr1 (1-48)||(41501781-41501828)
chr1 (4-58)||(38737554-38737608)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-89)||(44281-44369)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-89)||(41390-41478)
[»] scaffold0459 (1 HSPs)
scaffold0459 (1-89)||(12752-12840)
[»] scaffold0366 (2 HSPs)
scaffold0366 (1-89)||(10393-10481)
scaffold0366 (1-89)||(14059-14147)
[»] scaffold0027 (1 HSPs)
scaffold0027 (6-89)||(117321-117404)
[»] scaffold0340 (1 HSPs)
scaffold0340 (4-89)||(14345-14430)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-89)||(15389-15477)
[»] scaffold0111 (1 HSPs)
scaffold0111 (1-61)||(38533-38593)


Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 88 - 339
Target Start/End: Complemental strand, 45207034 - 45206785
Alignment:
Q  88 tatttaacaa-tttaagttattatgttttaaatcaattttcattaaattgtactcacacaaataaatggataaaagtcaatacttgtctgtcagtatgaa 186  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||  |||||||| |||||||||| |||||||||||| |||||||    
T  45207034 tatttaacaactttaaattattatgttttaaatcaattttaattaaattgtactcaca--aataaatgcataaaagtcattacttgtctgtc-gtatgaa 45206938  T
Q  187 ttataaatgcatgaaaatactaactcagagtgaaaatgtatatcattacaggacaaaacataacaatcgagcatagaagattgattgtttgatatgattt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||    
T  45206937 ttataaatgcatgaaaatactaactcagagtgaaaatgtatatcattacaagacaaaacataacaatcgagcagagaagattgattatttgatatgattt 45206838  T
Q  287 tgagaaagggtgaatttcaaacagaacagattcgattgcaaattggttcatca 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45206837 tgagaaagggtgaatttcaaacagaacagattcgattgcaaattggttcatca 45206785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7459993 - 7460075
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  7459993 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggag 7460075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 18659140 - 18659051
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  18659140 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagtat 18659051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 43137939 - 43137849
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  43137939 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagtatt 43137849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 8559178 - 8559259
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacgga 82  Q
    ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  8559178 tagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacgga 8559259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 38833752 - 38833671
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacgga 82  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  38833752 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacgga 38833671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 215 - 339
Target Start/End: Complemental strand, 45203424 - 45203302
Alignment:
Q  215 agtgaaaatgtatatcattacaggacaaaacataacaatcgagcatagaagattgattgtttgatatgattttgagaaagggtgaatttcaaacagaaca 314  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    |||  |||| ||||||||||| ||| ||| |||| |||||    
T  45203424 agtgaaaatgtatatcattacaagacaaaacataacaatcgagaatagaagattgaaaaattg--atgagtttgagaaaggttgattttgaaactgaaca 45203327  T
Q  315 gattcgattgcaaattggttcatca 339  Q
     ||||||||||||||||||||||||    
T  45203326 aattcgattgcaaattggttcatca 45203302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 54840304 - 54840389
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||| |||||    
T  54840304 agaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggatggagggagta 54840389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 37832988 - 37832900
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||| |||||    
T  37832988 tagagaattgaagatatcaaaaataaaacatatgcattggtatgtgtgtcagagtcaactatgtcatttatttagggacggagggagta 37832900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 51062478 - 51062399
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacg 80  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  51062478 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacg 51062399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 51392465 - 51392543
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggac 79  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  51392465 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagagtcaactaggtcatttatttagggac 51392543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 52668660 - 52668746
Alignment:
Q  3 gagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||    
T  52668660 gagaattgaaaatatcaaagataaaatatatgcattgatatgtgtgtcagagccaactaggtcatttatttagggacggagggagta 52668746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 1327399 - 1327310
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||| | |||||||||||||||||| ||||||    
T  1327399 tagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtaagagtcaactagatcatttatttagggacggagggagtat 1327310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 45167387 - 45167314
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttattta 74  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||    
T  45167387 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattta 45167314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21907084 - 21906996
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | ||||||| |||||||||| |||||    
T  21907084 tagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttattgagggacggagggagta 21906996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 34827409 - 34827321
Alignment:
Q  2 agagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||| | ||||| |||||||||| ||||||    
T  34827409 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagtat 34827321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10571317 - 10571399
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| ||||||  ||||||||||    
T  10571317 tagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaggtcatttatcgagggacggag 10571399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 46483639 - 46483558
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacgga 82  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||| || |||| |||||||||    
T  46483639 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacgga 46483558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38492140 - 38492052
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    ||||||||||||||||| |||||| |||||||||||||| || ||||||||||||||||||||| | ||||| |||||||||| |||||    
T  38492140 tagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagta 38492052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 49057944 - 49057862
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||  |||||||||||| ||||||| ||||||||||    
T  49057944 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaggtcatttattgagggacggag 49057862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 27849040 - 27848952
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||||||| || || | |||||||||| |||||    
T  27849040 tagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcaaagtcaactaggtcatctaatgagggacggagggagta 27848952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 29728271 - 29728359
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||| ||||||||||||| ||||| |||||||||||||| ||  |||||||||||||||||||| ||||||| |||||||||| |||||    
T  29728271 tagaaaattgaagatatctaagataaaacatatgcattggtacttgtgtcagagtcaactaggtcatttattgagggacggagggagta 29728359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 48707016 - 48707104
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||||| |||||||  | | |||||||||||||||| |||||    
T  48707016 tagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagaatcaactaaatcacttatttagggacggagggagta 48707104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 15503113 - 15503023
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||| ||||||||||| ||||||||||||||||| || |||| ||||||| ||||| || |||| |||||||||| |||||||    
T  15503113 tagagaattgaatatatcaaagataaaacatatgcattgatacgtatgtcggagtcaattaggtcatctattgagggacggagggagtatt 15503023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 53066462 - 53066374
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||| ||||||||||||||||||| |||||||||||||| || |||||||||||||||||| || || |||| |||||||||| ||||||    
T  53066462 tagataattgaagatatcaaagataaaacatatgcattggtaagtgtgtcagagtcaacta-gtcatctattgagggacggagggagtat 53066374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 25097360 - 25097448
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||| ||||||||||| || || |||| ||| |||||| |||||    
T  25097360 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgttagagtcaactaagtcatctattgaggtacggagggagta 25097448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28690604 - 28690541
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggt 64  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||    
T  28690604 tagagcattgaagatatcaaagataaaacatatgcattggtatgtgtgtcggagtcaactaggt 28690541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 32285349 - 32285412
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggt 64  Q
    |||||||||||||||||||||||| ||||||||| |||| || |||||||||||||||||||||    
T  32285349 tagagaattgaagatatcaaagataaaacatatgtattggtacgtgtgtcagagtcaactaggt 32285412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 45093807 - 45093748
Alignment:
Q  2 agagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||    
T  45093807 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaacta 45093748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32951309 - 32951397
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||||||  |||||||||| | ||||| |  ||||||||| |||||    
T  32951309 tagagaattgaagataccaaagataaaacatatgcattggtatgtgtgtcgaagtcaactagatcatttaatatgggacggagggagta 32951397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 3547593 - 3547683
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||| ||||||||||||||||||| |||||||||||||| || ||||||| ||||||| ||||| || || |  ||||||||| |||||||    
T  3547593 tagataattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaattaggtcatctaatatgggacggagggagtatt 3547683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 10435222 - 10435134
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    ||||||||||||||||| |||||| |||||||||||||| || |||||||  |||||||||| | ||||| |  |||||||| ||||||    
T  10435222 tagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggatagagta 10435134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35718028 - 35718088
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    |||| ||||||||||||||| ||| |||||||||||||| || ||||||||||||||||||    
T  35718028 tagaaaattgaagatatcaaggataaaacatatgcattggtacgtgtgtcagagtcaacta 35718088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7671486 - 7671549
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggt 64  Q
    |||||||||||||||||||||||| |||||||||||||||||  || ||| || ||||||||||    
T  7671486 tagagaattgaagatatcaaagataaaacatatgcattgatacatgcgtctgaatcaactaggt 7671549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9145590 - 9145527
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggt 64  Q
    |||| |||| |||||||||||||| |||||||||||||| || ||||||| |||||||||||||    
T  9145590 tagaaaattcaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggt 9145527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4238793 - 4238854
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    ||||||||||||||||| |||||| |||||||||||||| || |||||||  ||||||||||    
T  4238793 tagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcgaagtcaactag 4238854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 10437367 - 10437310
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    ||||||||||||||||||||| ||||||||  |||| || ||||||||||||||||||    
T  10437367 agaattgaagatatcaaagataaaacatataaattggtacgtgtgtcagagtcaacta 10437310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17052952 - 17052891
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    |||| ||||||||||||||||||| |||||||||||||| || |||||||  ||||||||||    
T  17052952 tagaaaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactag 17052891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 47638143 - 47638061
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    ||||||||||||||||| |||||| |||||||||||||| || |||| ||||| |||| || || || |||| || |||||||    
T  47638143 tagagaattgaagatattaaagataaaacatatgcattggtacgtgtatcagaatcaattaagtcatctattgagtgacggag 47638061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36665107 - 36665050
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaa 58  Q
    ||||||| |||||||||||||||| |||||||||||||| || |||| || |||||||    
T  36665107 tagagaaatgaagatatcaaagataaaacatatgcattggtacgtgtatcggagtcaa 36665050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 45211799 - 45211844
Alignment:
Q  285 tttgagaaagggtgaatttcaaacagaacagattcgattgcaaatt 330  Q
    ||||||||| ||||||||| ||||  ||||||||||||||||||||    
T  45211799 tttgagaaatggtgaatttgaaacccaacagattcgattgcaaatt 45211844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 16365449 - 16365509
Alignment:
Q  30 atatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||| || ||||||||||||||||||| |  | |||| |||||| ||||||||||    
T  16365449 atatgcattggtacgtgtgtcagagtcaactagatcgtctattgagggacagagagagtat 16365509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 52550797 - 52550877
Alignment:
Q  9 tgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||| ||||| |||||||||||||  || || |||| |||||||||| || || || |  |||||||||||||||    
T  52550797 tgaagatatcgaagataaaacatatgcattagtacgtatgtcggagtcaactaagtcatctaatatgggacggagagagta 52550877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 29627356 - 29627265
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtattt 92  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  29627356 tagagaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtattt 29627265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 35448170 - 35448258
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  35448170 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 35448258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38698051 - 38697960
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtattt 92  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||| ||||||||    
T  38698051 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaattaggtcatttatttagggacggagggagtattt 38697960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 23988667 - 23988579
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  23988667 tagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 23988579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 40512853 - 40512941
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||| |||||    
T  40512853 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 40512941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 42148395 - 42148307
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||||||||||||||| |||||    
T  42148395 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 42148307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 32334815 - 32334901
Alignment:
Q  3 gagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||| |||||    
T  32334815 gagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacagagggagta 32334901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5364508 - 5364421
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagt 88  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||| ||||    
T  5364508 tagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagt 5364421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 39894869 - 39894779
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||| | | |||||||||||||||| |||||||    
T  39894869 tagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaactagatcacttatttagggacggagggagtatt 39894779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5213095 - 5213185
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    ||||||||||||||||| |||||| |||||||||||||| || ||||||||||||||||||||| | ||||| |||||||||| |||||||    
T  5213095 tagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagtatt 5213185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 32002187 - 32002277
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| ||| | ||||||||| |||||||| |||||||    
T  32002187 tagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaagtagatcatttatttaaggacggagggagtatt 32002277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 37843748 - 37843838
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    ||||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||||| || |||| ||||||| ||||||||||    
T  37843748 tagagaattgaagatatcaaatataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacgaagagagtatt 37843838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 4925011 - 4925100
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||| ||||||||||| || |||| |||||||||| ||||||    
T  4925011 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagggtcaactaggtcatctattgagggacggagggagtat 4925100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 35290374 - 35290285
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||||| || |||| |||||||||| ||||||    
T  35290374 tagagaattgaagatatcaaagataaaatatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacggagggagtat 35290285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 37516232 - 37516144
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||| | || |||| |||||||||| |||||    
T  37516232 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagatcatctattgagggacggagggagta 37516144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14475407 - 14475488
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacgga 82  Q
    |||||||||||||||||||||||| |||||||||||||  || ||||||| ||||||||||||| || |||| |||||||||    
T  14475407 tagagaattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcggagtcaactaggtcatctattaagggacgga 14475488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 39036498 - 39036409
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||||| || || |||| || ||||||| ||||||    
T  39036498 tagagaattgaagatatcaaagataaaacatatacattggtacgtgtgtcagagtcaactatgtcatctattgagagacggagggagtat 39036409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 41411331 - 41411419
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||  ||||||||| || || |||| |||||||||| |||||    
T  41411331 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaagtcatctattgagggacggagggagta 41411419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 43517233 - 43517314
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacgga 82  Q
    ||||||||||| |||||||||||| |||||||||||||  || ||||||||||||||||||||| || |||| |||| ||||    
T  43517233 tagagaattgatgatatcaaagataaaacatatgcattagtacgtgtgtcagagtcaactaggtcatctattgaggggcgga 43517314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 1830742 - 1830654
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||  ||||||  ||||||||| || || |||| |||||||||| |||||    
T  1830742 tagagaattgaagatatcaaagataaaacatatgcattggtacatgtgtcgaagtcaactaagtcatctattgagggacggagggagta 1830654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16048171 - 16048083
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||  |||||||||| | ||||  |  |||||||||||||||    
T  16048171 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttgatatgggacggagagagta 16048083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 40316209 - 40316121
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||  ||||||  ||||||||| || || |||| |||||||||| |||||    
T  40316209 tagagaattgaagatatcaaagataaaacatatgcattggtacatgtgtcgaagtcaactaagtcatctattgagggacggagggagta 40316121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19889742 - 19889679
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggt 64  Q
    |||||||||||||||||||||||| |||||||||||||| || |||| || |||||||||||||    
T  19889742 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcggagtcaactaggt 19889679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4300005 - 4300066
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||  ||||||||||    
T  4300005 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactag 4300066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42421773 - 42421712
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    |||||||||||||||||||||||| |||||||||||| | || ||||||| |||||||||||    
T  42421773 tagagaattgaagatatcaaagataaaacatatgcataggtacgtgtgtcggagtcaactag 42421712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 30779922 - 30780006
Alignment:
Q  5 gaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    ||||||||||||| |||||| ||||||||| |||| || ||||||| ||||||||||||| || |||| ||| |||||| |||||    
T  30779922 gaattgaagatatgaaagataaaacatatgtattggtacgtgtgtcggagtcaactaggtcatctattgaggaacggagggagta 30780006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 43067314 - 43067235
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    ||||||||||||||||||||| |||||||||||||| || |||||||  |||||||||| | ||||| |  |||||||||    
T  43067314 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggag 43067235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 970226 - 970165
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    |||||||||||||||| ||||||| |||||||||||||| || |||||||  ||||||||||    
T  970226 tagagaattgaagataacaaagataaaacatatgcattggtacgtgtgtcgaagtcaactag 970165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22613882 - 22613943
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    |||| ||||||||||||||||||| |||||||||||||| || |||||||  ||||||||||    
T  22613882 tagaaaattgaagatatcaaagataaaacatatgcattggtacgtgtgtctaagtcaactag 22613943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15268198 - 15268138
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    ||||||||||||||||| ||| || ||||||||||||| ||| ||||||| ||||||||||    
T  15268198 tagagaattgaagatattaaaaataaaacatatgcattaatacgtgtgtcggagtcaacta 15268138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 39405852 - 39405764
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    ||||||||||||||||| |||||| |||||||||||||| || |||| ||  |||||||||| | ||||| |  ||||||||| |||||    
T  39405852 tagagaattgaagatattaaagataaaacatatgcattggtacgtgtctcgaagtcaactagatcatttaatatgggacggagggagta 39405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21961315 - 21961256
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaact 60  Q
    |||| |||| ||||||| |||||| ||||||||| ||||||||||||| |||||||||||    
T  21961315 tagataattaaagatattaaagataaaacatatgaattgatatgtgtgacagagtcaact 21961256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 16954749 - 16954688
Alignment:
Q  30 atatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||| || |||||||||||||||||| || || |||| |||||||||| |||||||    
T  16954749 atatgcattggtacgtgtgtcagagtcaactaagtcatctattgagggacggagggagtatt 16954688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19868858 - 19868918
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    |||| ||||||| ||| ||||||| |||||||||||||| || ||||||| ||||||||||    
T  19868858 tagacaattgaaaatagcaaagataaaacatatgcattggtacgtgtgtcggagtcaacta 19868918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24520296 - 24520242
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtc 56  Q
    ||||||||||||||||||||| || |||||||| |||||||| ||||||| |||||    
T  24520296 tagagaattgaagatatcaaa-ataaaacatatacattgatacgtgtgtcggagtc 24520242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 32300658 - 32300599
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaact 60  Q
    |||| |||| ||||||| |||||| ||| |||||||||||||| |||| |||||||||||    
T  32300658 tagataattaaagatattaaagataaaaaatatgcattgatatttgtgacagagtcaact 32300599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 25563583 - 25563525
Alignment:
Q  6 aattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggt 64  Q
    ||||||||||||||||||| ||||||||||||||  | ||||||   ||||||||||||    
T  25563583 aattgaagatatcaaagataaaacatatgcattggaacgtgtgttgaagtcaactaggt 25563525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 19087946 - 19088003
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    |||||||||||||||| | || |||| ||||||||| || ||||||| ||||||||||    
T  19087946 agaattgaagatatcataaataaaacttatgcattggtacgtgtgtcggagtcaacta 19088003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 18718327 - 18718238
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  18718327 tagagaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 18718238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 14372165 - 14372076
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  14372165 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 14372076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 23671464 - 23671375
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  23671464 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 23671375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 40425422 - 40425513
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtattt 92  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  40425422 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttatttagggacggagggagtattt 40425513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 42038611 - 42038521
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||| |||||||    
T  42038611 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagtatt 42038521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 34827000 - 34826911
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  34827000 tagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 34826911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 27559663 - 27559575
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  27559663 tagagaattgaagatatcaaagataaaacatatacattgatatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 27559575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 14707710 - 14707789
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  14707710 agaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggag 14707789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 4045406 - 4045499
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatttaa 94  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |  | |||||||||||||||||| ||||||||||    
T  4045406 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaaccaaatcatttatttagggacggagggagtatttaa 4045499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 41172930 - 41173019
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  41172930 tagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaagtaggtcatttatttagggacggagggagtat 41173019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3987405 - 3987493
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||| | |||||||||||||||||| |||||    
T  3987405 tagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 3987493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 20517507 - 20517417
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| || || |||||||||| ||||||| |||||||    
T  20517507 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaattatgtcatttatttagagacggagggagtatt 20517417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 44330472 - 44330399
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttattta 74  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||    
T  44330472 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattta 44330399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7443064 - 7443152
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||| | ||||| |||||||||| |||||    
T  7443064 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagta 7443152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 44283452 - 44283540
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||||||||||| |||||||||| ||||||||| |||||||| |||||    
T  44283452 tagagaattgaagatatcaaagataaaatatatgcattggtatgtgtgtcagaatcaactaggtcatttatttaaggacggagggagta 44283540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41463690 - 41463777
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagt 88  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||| ||||||||||||| ||||||| |||||||||| ||||    
T  41463690 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcatttattgagggacggagggagt 41463777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 16941984 - 16942066
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||||||| |||||||    
T  16941984 tagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagcgacggag 16942066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17012649 - 17012731
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||||||| |||||||    
T  17012649 tagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagcgacggag 17012731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 9877256 - 9877345
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    ||||||||| |||||||||||||| ||||||||||||| | | ||||||||||||||||||||| || |||| |||||||||| ||||||    
T  9877256 tagagaattaaagatatcaaagataaaacatatgcattcacacgtgtgtcagagtcaactaggtcatctattgagggacggagggagtat 9877345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 30708816 - 30708727
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||| |||||||||||| | ||||| || ||||||| ||||||    
T  30708816 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaaagtcaactaggtcacttattcagagacggagggagtat 30708727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 32776073 - 32776162
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||||||||| || |||| || ||||||||||||| || |||| |||||||||| ||||||    
T  32776073 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcggagtcaactaggtcatctattaagggacggagggagtat 32776162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 38588072 - 38588143
Alignment:
Q  11 aagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacgga 82  Q
    |||||||||||||| |||||||||||||| ||||||| |||||||||||||| | |||||||||||||||||    
T  38588072 aagatatcaaagataaaacatatgcattggtatgtgtatcagagtcaactagatcatttatttagggacgga 38588143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36199124 - 36199197
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttattta 74  Q
    |||||||| ||||||||||||||| |||||||||||||  |||||||||||||||||||||| | |||||||||    
T  36199124 tagagaatcgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactagatcatttattta 36199197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 40598216 - 40598128
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||  |||||||||| | ||||| |  ||||||||| |||||    
T  40598216 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggagggagta 40598128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 4083292 - 4083234
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    |||||| ||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  4083292 agaattaaagatattaaagataaaacatatgcattgatatgtgtgtcggagtcaactag 4083234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 38963607 - 38963518
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||| ||||||||| |||||||||||||| || |||||||  ||| |||||||| || |||| ||| |||||| ||||||    
T  38963607 tagagaattgaagaaatcaaagataaaacatatgcattggtacgtgtgtcgaagttaactaggtcatctattaaggaacggagggagtat 38963518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 38137707 - 38137764
Alignment:
Q  5 gaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    |||||||||||||||||||| |||||||||||||  || ||||||| |||||||||||    
T  38137707 gaattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcggagtcaactag 38137764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40898728 - 40898667
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    |||||||||||||||||||||||| |||||||| ||||  || ||||||| |||||||||||    
T  40898728 tagagaattgaagatatcaaagataaaacatatacattagtacgtgtgtcggagtcaactag 40898667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 24283131 - 24283210
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacg 80  Q
    |||||||||||||||||||||||| ||||||||||||   || ||||||| ||  ||||||||| || |||| |||||||    
T  24283131 tagagaattgaagatatcaaagataaaacatatgcatcagtacgtgtgtcggaaacaactaggtcatctattgagggacg 24283210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30776366 - 30776404
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattg 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  30776366 tagagaattgaagatatcaaagataaaacatatgcattg 30776404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 43925254 - 43925291
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcatt 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  43925254 tagagaattgaagatatcaaagataaaacatatgcatt 43925291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 5030462 - 5030525
Alignment:
Q  19 aaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacgga 82  Q
    |||||| ||| |||||||||| ||||||||||| |||||||||||| || |||| | |||||||    
T  5030462 aaagataaaaaatatgcattggtatgtgtgtcaaagtcaactaggtcatctattaacggacgga 5030525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 332364 - 332330
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgc 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  332364 tagagaattgaagatatcaaagataaaacatatgc 332330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 42951425 - 42951367
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    ||||| ||| |||||||| || |||||||| |||||||| ||||||| |||||||||||    
T  42951425 agaatagaaaatatcaaaaataaaacatatacattgatacgtgtgtcggagtcaactag 42951367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39418193 - 39418254
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    |||| ||||||||||||||||||| ||| ||||| |||| || |||||||  ||||||||||    
T  39418193 tagataattgaagatatcaaagataaaatatatgtattggtaagtgtgtcgaagtcaactag 39418254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4045938 - 4045878
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    |||| |||| |||||||||||||| |||||||||||||  || || ||||||| |||||||    
T  4045938 tagaaaattaaagatatcaaagataaaacatatgcattagtacgtatgtcagaatcaacta 4045878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13399278 - 13399338
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    ||||||||||||||||| ||| || |||| ||||||||| ||  ||| |||||||||||||    
T  13399278 tagagaattgaagatataaaaaataaaacgtatgcattggtacatgtatcagagtcaacta 13399338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 45081900 - 45081812
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45081900 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggttatttatttagggacggagggagta 45081812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38845288 - 38845197
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtattt 92  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  38845288 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtattt 38845197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 29791030 - 29790942
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  29791030 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 29790942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 40013739 - 40013649
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||| |||||||    
T  40013739 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattaagggacggagggagtatt 40013649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 30290012 - 30289923
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||| ||||||    
T  30290012 tagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaactaggtcatttatttagggacggagggagtat 30289923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3293275 - 3293366
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtattt 92  Q
    |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| | |||||||||||||||||| ||||||||    
T  3293275 tagagaattgaagatatcaaagataaaacatatgcattggtatatgtgtcagagtcaactagatcatttatttagggacggagggagtattt 3293366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 43066212 - 43066133
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  43066212 agaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggag 43066133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2805649 - 2805739
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| ||| |||||||||||||||||| |||||||    
T  2805649 tagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaactgggtcatttatttagggacggagggagtatt 2805739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 37709987 - 37709898
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  37709987 tagagaattgaagatatcaaagataaaacatatacattggtatgtgtgttagagtcaactaggtcatttatttagggacggagggagtat 37709898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1580938 - 1581026
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| |||||    
T  1580938 tagagaattgaagatatcaaagataaaatatatgcattgatacgtgtgtcagagtcaactaggtcatttattcagggacggagggagta 1581026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38739745 - 38739657
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  38739745 tagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaaggacggagggagta 38739657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 30380618 - 30380527
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtattt 92  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| | | |||||||||||||||| ||||||||    
T  30380618 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaattagatcacttatttagggacggagggagtattt 30380527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 6470933 - 6470853
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacgg 81  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| || |||| ||||||||    
T  6470933 tagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagagtcaactaggtcatatattgagggacgg 6470853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13138305 - 13138393
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||| |||||| ||| |||||    
T  13138305 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatttattgagggacagagggagta 13138393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 8351053 - 8351142
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| ||||||||||| || || ||||||||||||||||||| | | |||||||||||||||| ||||||    
T  8351053 tagagaattgaagatatcaaagataaaacatatgcactggtacgtgtgtcagagtcaactagatcacttatttagggacggagggagtat 8351142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 2986426 - 2986337
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||| | ||||| || ||||||| |||||||    
T  2986426 tagagaattgaagatatcaa-gataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttattcagagacggagggagtatt 2986337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 23248865 - 23248783
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    |||||||||||| ||||||||||| |||||||||||||||||| ||||| |||||||||||||| ||||||||| ||| ||||    
T  23248865 tagagaattgaatatatcaaagataaaacatatgcattgatatatgtgttagagtcaactaggtcatttatttaaggagggag 23248783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 39361213 - 39361128
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    ||||||||||||||||||||| || |||||||||||||| |||||||||||||||   |||| | ||||||||||| ||||||||||||    
T  39361213 tagagaattgaagatatcaaaaataaaacatatgcattggtatgtgtgtcagagt---ctagatcatttatttaggaacggagagagta 39361128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 44123761 - 44123671
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    ||||||||||||||| |||||||| ||||||||||||||||| ||||||| ||||||||||| | || || |  |||||||||||||||||    
T  44123761 tagagaattgaagatttcaaagataaaacatatgcattgatacgtgtgtcggagtcaactagatcatctaatatgggacggagagagtatt 44123671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12893619 - 12893559
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  12893619 tagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcggagtcaacta 12893559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14522468 - 14522377
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtattt 92  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | | |||||||| | || |||| ||||| | || ||||||||    
T  14522468 tagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgttaaaatcaactagatcatctattgagggatgaagggagtattt 14522377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 9302528 - 9302589
Alignment:
Q  3 gagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggt 64  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||| ||||||||| |||||    
T  9302528 gagaattgaagatatcaaagataaaacatatacatttatatgtgtgccagagtcaattaggt 9302589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 23764624 - 23764713
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatg-tgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||| |||||||| || |||||||||||||| || | ||||||  |||||||||| ||||||||  ||||||||||||||||    
T  23764624 tagagaattgaatatatcaaatataaaacatatgcattggtacgttgtgtcgaagtcaactagattatttatcgagggacggagagagta 23764713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31127978 - 31128038
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||  |||||||||    
T  31127978 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaacta 31128038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 886240 - 886303
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggt 64  Q
    ||||||||| |||||||||||||| |||||||||||||| || ||||||| |||||||| ||||    
T  886240 tagagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaaccaggt 886303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 45253838 - 45253747
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgt-gtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    ||||||||||||||||||||| || |||||||||||||| || |||| ||| ||||||||||| | || |||| |||||| ||| |||||||    
T  45253838 tagagaattgaagatatcaaaaataaaacatatgcattggtacgtgtcgtcggagtcaactagatcatctattaagggacagagggagtatt 45253747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18809364 - 18809315
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtc 50  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||    
T  18809364 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtc 18809315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25256422 - 25256361
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    |||||||||||||||||||||||| |||||| ||||||| |||  ||||| |||||||||||    
T  25256422 tagagaattgaagatatcaaagataaaacatttgcattggtataagtgtcggagtcaactag 25256361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11854612 - 11854551
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    ||||||||||||||||||||| || ||| |||||||||| || |||||||  ||||||||||    
T  11854612 tagagaattgaagatatcaaaaataaaatatatgcattggtacgtgtgtcgaagtcaactag 11854551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 14847295 - 14847210
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||| |||||||||||||| |||||||||||||| |  ||||||| || |||||||||| || |||  ||||||| || |||||    
T  14847295 agaattaaagatatcaaagataaaacatatgcattggtgcgtgtgtcggaatcaactaggtcatctatcgagggacgtagggagta 14847210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10658066 - 10658006
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    |||||||||||||||||||||||| |||||||||  ||| ||  |||||| ||||||||||    
T  10658066 tagagaattgaagatatcaaagataaaacatatgtgttggtacatgtgtcggagtcaacta 10658006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 4e-35; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3901312 - 3901403
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtattt 92  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  3901312 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtattt 3901403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 46212523 - 46212613
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  46212523 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 46212613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 46803719 - 46803630
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  46803719 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 46803630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5744256 - 5744344
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  5744256 tagagaattgaagatatcaaagataaaacatatacattgatatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 5744344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6494676 - 6494594
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6494676 tagagaattgaagatattaaagataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagggacggag 6494594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 5735359 - 5735270
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  5735359 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagtat 5735270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 28166362 - 28166273
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  28166362 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagtat 28166273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 45198513 - 45198602
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  45198513 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagtat 45198602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 47579375 - 47579286
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  47579375 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagagtcaactaggtcatttatttagggacggagggagtat 47579286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3442517 - 3442605
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||| |||||    
T  3442517 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactatgtcatttatttagggacggagggagta 3442605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21859092 - 21859180
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21859092 tagagaattgaaaatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaggttatttatttagggacggagggagta 21859180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21914955 - 21915043
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21914955 tagagaattgaaaatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaggttatttatttagggacggagggagta 21915043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 26205877 - 26205967
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||| |||||||    
T  26205877 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagagtcaactagatcatttatttagggacggagggagtatt 26205967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4264222 - 4264134
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  4264222 tagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattgagggacggagggagta 4264134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 39786529 - 39786617
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| || |||| |||||||||| |||||    
T  39786529 tagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagagtcaactaggtcatctattgagggacggagggagta 39786617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 28152079 - 28151988
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtattt 92  Q
    ||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||| ||| ||||    
T  28152079 tagagaattgaagatatcaaatataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaaggacggagggaggattt 28151988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 37688206 - 37688288
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||| | ||||||||||||||||||    
T  37688206 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcatctagatcatttatttagggacggag 37688288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 49768533 - 49768451
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| || ||||||||||||||||||    
T  49768533 tagagaattgaagatatcaaagataaaacatatgcattgatatgtatgtcatagtcaactaagtcatttatttagggacggag 49768451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7738992 - 7739073
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacgga 82  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  7738992 tagagaattgaatatatcaaagataaaacatatgcattgatacgtgtgtcggagtcaactaggtcatttatttagggacgga 7739073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 20678760 - 20678842
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    |||||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  20678760 tagagaattgaaaatatcaaagataaaatatatgcattgatatatgtgtcagagtcaactagatcatttatttagggacggag 20678842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 18360146 - 18360234
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| || ||| ||||||||||||||||| || |||| |||||||||| |||||    
T  18360146 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgcgtcagagtcaactaggtcatctattgagggacggagggagta 18360234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36602782 - 36602694
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| || ||| ||||||||||||||||| || |||| |||||||||| |||||    
T  36602782 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgcgtcagagtcaactaggtcatctattgagggacggagggagta 36602694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 55190887 - 55190979
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtattta 93  Q
    |||| ||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||| || |||| ||||||||||  ||||||||    
T  55190887 tagataattgaagatatcaaagataaaacatatgcattggtaagtgtgtcagagtcaactaggtcatctattgagggacggaggaagtattta 55190979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4209451 - 4209363
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| ||||||||| |||| || ||||||||||||||||||| | || |||| |||||||||| |||||    
T  4209451 tagagaattgaagatatcaaagataaaacatatgtattggtacgtgtgtcagagtcaactagatcatctattgagggacggagggagta 4209363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 23256023 - 23255935
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    ||||||||||||||||||||| || ||| |||||||||| || ||||||||||||||||||||| || |||| |||||||||| |||||    
T  23256023 tagagaattgaagatatcaaatataaaatatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacggagggagta 23255935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 1377120 - 1377049
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatt 72  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| || |||||||    
T  1377120 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcatagtcaactacgtcatttatt 1377049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 53568439 - 53568380
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactagg 63  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  53568439 agaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcggagtcaactagg 53568380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 50033108 - 50033018
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||| |||||||||| || || || |  |||||||||||||||||    
T  50033108 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaagtcatctaatatgggacggagagagtatt 50033018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 50035627 - 50035537
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    ||||||||||||||| |||||||| ||||||||||||||||| ||||||| ||||||||||| | || || |  |||||||||||||||||    
T  50035627 tagagaattgaagatttcaaagataaaacatatgcattgatacgtgtgtcggagtcaactagatcatctaatatgggacggagagagtatt 50035537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 5123330 - 5123419
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||| ||||||||||||||||||| |||||||||||||| || |||||||||||||||||| || || |||| ||||| |||| ||||||    
T  5123330 tagataattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaagtcatctattgagggatggagggagtat 5123419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 19634021 - 19634110
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| ||||||||| |||| || ||||||| ||||||||||| | || |||| ||||||| || ||||||    
T  19634021 tagagaattgaagatatcaaagataaaacatatgaattggtacgtgtgtcggagtcaactagatcatctattaagggacgaagggagtat 19634110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 19652428 - 19652519
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtattt 92  Q
    |||||||||||||||||||||||| ||||||||| |||| || || |||| ||||||||||| | || |||| ||||||||||  |||||||    
T  19652428 tagagaattgaagatatcaaagataaaacatatgaattggtacgtatgtcggagtcaactagatcatatattgagggacggaggaagtattt 19652519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19731338 - 19731401
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggt 64  Q
    ||||| |||||||||||||||||| |||||||||||||| || ||||||| |||||||||||||    
T  19731338 tagagcattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggt 19731401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 19525890 - 19525956
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttattta 70  Q
    ||||||||||||||||||||| |||||||||||||| || |||||||  |||||||||||| |||||    
T  19525890 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaggtcattta 19525956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 51737130 - 51737216
Alignment:
Q  5 gaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||| |||| |||||| |||||||||||||| || ||||||| |||||||| ||||||| || |  |||||||||||||||||    
T  51737130 gaattgaaaatataaaagataaaacatatgcattggtacgtgtgtcggagtcaacaaggttatctaatatgggacggagagagtatt 51737216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3443560 - 3443617
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaa 58  Q
    |||||||||||||||||||||||| |||||||||||||  || |||||||||||||||    
T  3443560 tagagaattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcagagtcaa 3443617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6923113 - 6923174
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||  ||||||||||    
T  6923113 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactag 6923174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 19170712 - 19170801
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    ||||||||||||||||| |||||| ||| |||||||||| ||  ||||||  |||||||||||| || |||| |||||||||| ||||||    
T  19170712 tagagaattgaagatattaaagataaaatatatgcattggtacatgtgtcgaagtcaactaggtcatctattgagggacggagcgagtat 19170801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19631396 - 19631339
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaa 58  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||| |||||||    
T  19631396 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaa 19631339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25644447 - 25644386
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||  ||||||||||    
T  25644447 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactag 25644386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 23603825 - 23603880
Alignment:
Q  6 aattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    ||||||||||||||||||| ||||| |||||||| || ||||||||||||||||||    
T  23603825 aattgaagatatcaaagataaaacagatgcattggtacgtgtgtcagagtcaacta 23603880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 26659928 - 26659865
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggt 64  Q
    |||||||||||||||||||||| | ||||||||||| |||||  |||||| |||||||||||||    
T  26659928 tagagaattgaagatatcaaagctaaaacatatgcagtgatacatgtgtcggagtcaactaggt 26659865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 39260304 - 39260383
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacg 80  Q
    |||||||||||||||||||||||| ||| ||||| |||| ||  |||||||||||||||||| | || |||| |||||||    
T  39260304 tagagaattgaagatatcaaagataaaatatatgtattggtacatgtgtcagagtcaactagatcatctattgagggacg 39260383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 39195672 - 39195742
Alignment:
Q  19 aaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||| || || | ||||||| || |||||    
T  39195672 aaagataaaaaatatgcattgatatgtgtgtcagagtcaactaggtcatctaataagggacgaagggagta 39195742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 55014345 - 55014284
Alignment:
Q  6 aattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttat 67  Q
    ||||||| ||||||||||| |||||||||||||  || ||||||| ||||||||||||||||    
T  55014345 aattgaatatatcaaagataaaacatatgcattagtacgtgtgtcggagtcaactaggttat 55014284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42187152 - 42187212
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    ||||||||| |||||||||||||| ||| |||||||||| || || |||||||||||||||    
T  42187152 tagagaattaaagatatcaaagataaaatatatgcattggtacgtatgtcagagtcaacta 42187212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 55997202 - 55997146
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtca 57  Q
    |||||||||||||||||||||||| |||| ||||||||| || ||||||| ||||||    
T  55997202 tagagaattgaagatatcaaagataaaacgtatgcattggtacgtgtgtcggagtca 55997146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 39194000 - 39193941
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaact 60  Q
    ||||||||  ||||||| |||||| ||| |||||||||||||| ||||||||||||||||    
T  39194000 tagagaatgaaagatattaaagataaaagatatgcattgatatatgtgtcagagtcaact 39193941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 51736882 - 51736822
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    |||| |||| || |||| |||||| ||| ||||||||| ||||||||||||||||||||||    
T  51736882 tagataattaaacatattaaagatcaaatatatgcattaatatgtgtgtcagagtcaacta 51736822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 10181076 - 10181017
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaact 60  Q
    |||| ||||||| |||| |||||| ||||||||| |||| |||||||| |||||||||||    
T  10181076 tagataattgaaaatattaaagataaaacatatgtattggtatgtgtgacagagtcaact 10181017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 14958067 - 14958033
Alignment:
Q  30 atatgcattgatatgtgtgtcagagtcaactaggt 64  Q
    |||||||||| ||||||||||||||||||||||||    
T  14958067 atatgcattggtatgtgtgtcagagtcaactaggt 14958033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50971547 - 50971491
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaa 58  Q
    ||||||||| || |||||||| || |||||||||||||| || |||||||||||||||    
T  50971547 tagagaattaaatatatcaaa-ataaaacatatgcattggtacgtgtgtcagagtcaa 50971491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 27976744 - 27976780
Alignment:
Q  2 agagaattgaagatatcaaagatgaaacatatgcatt 38  Q
    |||||||||||||||| |||||| |||||||||||||    
T  27976744 agagaattgaagatattaaagataaaacatatgcatt 27976780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36819784 - 36819696
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  36819784 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 36819696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 32619115 - 32619204
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||    
T  32619115 tagagaattgaagatatcaaaaataaaacatatgcattgatatgtgtgtcagagtcaactaagtcatttatttagggacggagggagtat 32619204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 19072857 - 19072769
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| |||||    
T  19072857 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttatttagggacggagggagta 19072769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 42086811 - 42086899
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||| |||||    
T  42086811 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggatggagggagta 42086899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44479893 - 44479975
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||    
T  44479893 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggag 44479975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 2400373 - 2400284
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||| ||||||||||||||| |||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  2400373 tagagaatggaagatatcaaagataaaacatatgcattggtatatgtgtcagagtcaactaggtcatttatttagggacggagggagtat 2400284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23474142 - 23474223
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacgga 82  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||    
T  23474142 tagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagagtcaactaggtcacttatttagggacgga 23474223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 28185581 - 28185670
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    ||||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  28185581 tagagaattaaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 28185670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 37951118 - 37951207
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||| ||||||||| |||||||| ||||||    
T  37951118 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgcgtcagagtcaactaggtcatttatttatggacggagggagtat 37951207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 47081068 - 47080980
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  47081068 tagagaatttaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcattcatttagggacggagggagta 47080980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 47713675 - 47713763
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||| |||||    
T  47713675 tagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 47713763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 31466534 - 31466619
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    ||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||| | |||||||||||||||| |||||    
T  31466534 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 31466619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 36859381 - 36859470
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| ||||| ||||||||||| |||||| ||||||    
T  36859381 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgttagagtcaattaggtcatttatttaggaacggagggagtat 36859470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36905614 - 36905526
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||  | |||||||||||||||||| |||||    
T  36905614 tagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaaatcatttatttagggacggagggagta 36905526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 31110710 - 31110625
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagt 88  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||  ||||||||||||||| |||||||||||||||||| ||||    
T  31110710 tagagaattgaaaatatcaaagataaaacatatgcattgagatgtgt--cagagtcaactaggtcatttatttagggacggagggagt 31110625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 34478184 - 34478272
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||  |||||||||||||||||| |  ||||||||| |||||    
T  34478184 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaggttatttaatatgggacggagggagta 34478272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 4612263 - 4612349
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||| || ||| |||||||||| ||| |||||||||||||||| ||| ||||||||||||||| || ||||||    
T  4612263 agaattgaagatatcaaacataaaatatatgcattggtatttgtgtcagagtcaactgggtcatttatttagggacgtagggagtat 4612349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 42834468 - 42834553
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||| ||| |||||| ||||| |||||||||| ||||||| |||||    
T  42834468 agaattgaagatatcaaagataaaacatatacattggtatgtgtatcaaagtcaaataggtcatttatttagagacggagggagta 42834553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 48531410 - 48531350
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||    
T  48531410 tagagaattgaagatatcaaagataaaatatatgcattgatacgtgtgtcagagtcaacta 48531350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 47713777 - 47713840
Alignment:
Q  26 aaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||| |||||    
T  47713777 aaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 47713840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21392106 - 21392045
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    ||||||||| |||||||||||||| |||||||||||||| || |||||||||||||||||||    
T  21392106 tagagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactag 21392045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10464288 - 10464348
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||| |||||||||    
T  10464288 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaaagtcaacta 10464348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 37231737 - 37231825
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||  |||||||||| | ||||| |  ||||||||| |||||    
T  37231737 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggagggagta 37231825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31497876 - 31497942
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttat 67  Q
    |||| ||||||||||||||||||| ||||||||| |||  |||||||||| ||||||||||||||||    
T  31497876 tagataattgaagatatcaaagataaaacatatgtattagtatgtgtgtcggagtcaactaggttat 31497942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 4033379 - 4033294
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagaga 86  Q
    |||| |||| || |||| |||||| ||| ||||||||||||||||||||||||||||||||| | || || | |||||||||||||    
T  4033379 tagataattaaatatattaaagataaaaaatatgcattgatatgtgtgtcagagtcaactagatcatctaataagggacggagaga 4033294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 35500920 - 35501008
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||  ||| |||||| | ||||| |  ||||||||| |||||    
T  35500920 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagttaactagatcatttaatatgggacggagggagta 35501008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 47538011 - 47537932
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacg 80  Q
    |||||||||||||||||||||||| |||||||||||||| || || | ||||| |||| ||| | ||||||| |||||||    
T  47538011 tagagaattgaagatatcaaagataaaacatatgcattggtacgtatatcagaatcaattagatcatttattgagggacg 47537932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36643250 - 36643201
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtc 50  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||    
T  36643250 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtc 36643201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 38198556 - 38198506
Alignment:
Q  14 atatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggt 64  Q
    |||| |||||| ||| |||||||||||||||||| ||||||||||||||||    
T  38198556 atattaaagataaaaaatatgcattgatatgtgtatcagagtcaactaggt 38198506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39982287 - 39982341
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagt 55  Q
    ||||||||||||||||| |||||| |||||||||||||  |||||||| ||||||    
T  39982287 tagagaattgaagatattaaagataaaacatatgcattattatgtgtgacagagt 39982341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 40348498 - 40348409
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||| |||| || |||| |||||| ||| ||||||||||||||| ||||| |||||||||| ||||| || |  ||||||||| ||||||    
T  40348498 tagataattaaatatattaaagataaaaaatatgcattgatatgagtgtctgagtcaactacgttatctaatatgggacggagggagtat 40348409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 42493806 - 42493862
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaact 60  Q
    |||||| ||||||| |||||| ||| |||| |||||||||||||| |||||||||||    
T  42493806 agaattaaagatattaaagataaaaaatatacattgatatgtgtgacagagtcaact 42493862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 643604 - 643692
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  643604 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 643692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 31854906 - 31854818
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||| ||| |||||||||||||||||| |||||    
T  31854906 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtatcagagtcaactgggtcatttatttagggacggagggagta 31854818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 24150829 - 24150739
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||  |||||||    
T  24150829 tagagaattgaagatatcaaagataaaatatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaggaacggatggagtatt 24150739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22020364 - 22020291
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttattta 74  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||    
T  22020364 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattta 22020291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 8796138 - 8796050
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    ||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||||| | |||||||||||||||||| |||||    
T  8796138 tagagaattaaagatatcaaagataaaacatatacattggtatgtgtgtcagagtcaactagatgatttatttagggacggagtgagta 8796050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11114653 - 11114565
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||||||||||| |||||||||| ||||||| |||||||||| |||||    
T  11114653 tagagaatcgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttattgagggacggagggagta 11114565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 29403732 - 29403644
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||| || ||||||| | ||||||||||||||    
T  29403732 tagagaattgaagatatcaaagataaaacatacgcattggtatgtgtgtcagagtcaactaagtcatttattaaaggacggagagagta 29403644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 33121630 - 33121542
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||  |||||||||||| ||||||| |||||||||| |||||    
T  33121630 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaggtcatttattaagggacggagggagta 33121542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29986331 - 29986394
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggt 64  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  29986331 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggt 29986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 25435499 - 25435410
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| | ||||||| ||| |||||| |||||||    
T  25435499 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtca-agtcaactagatcatttattgaggaacggagggagtatt 25435410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13207126 - 13207214
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||| || || |   ||||||||||||||    
T  13207126 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctaatgtaggacggagagagta 13207214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 18991992 - 18991904
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||| |||||||||||||||| || |||||||||||||| || ||||||||||||||||||||| | ||||| |||||||||| |||||    
T  18991992 tagaaaattgaagatatcaaaaataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagta 18991904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 20662232 - 20662315
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttattt-agggacggag 83  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||| |||||||| ||||||||| |||||||| ||||||||||    
T  20662232 tagagaattgaagatattaaagataaaacatatgcattggtatgtatgtcagaggcaactaggtcatttatttgagggacggag 20662315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7098046 - 7098107
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  7098046 tagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactag 7098107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 30237254 - 30237165
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaa-catatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||| ||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||| || |||| |||||||||| |||||    
T  30237254 tagagaatcgaagatatcaaagataaaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacggagggagta 30237165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 25163251 - 25163203
Alignment:
Q  2 agagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtc 50  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||||    
T  25163251 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtc 25163203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 3e-33; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 25531866 - 25531778
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  25531866 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 25531778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 48219815 - 48219903
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  48219815 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 48219903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 50539348 - 50539257
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtattt 92  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  50539348 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagtattt 50539257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 39354437 - 39354527
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||| || |||||||    
T  39354437 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacgtagggagtatt 39354527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32988522 - 32988610
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||| |||||    
T  32988522 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 32988610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 48264984 - 48265072
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  48264984 tagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 48265072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 52379077 - 52378989
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||||||||||||||| |||||    
T  52379077 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 52378989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 50876452 - 50876364
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  50876452 tagagaattgaagatatcaaagataaaacatatgcattggtatatgtgttagagtcaactaggtcatttatttagggacggagggagta 50876364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 38458817 - 38458735
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||| ||||||| ||||||||||    
T  38458817 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttattgagggacggag 38458735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 49805428 - 49805512
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagt 88  Q
    ||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||| | |||||||||||||||||| ||||    
T  49805428 agaattgaagatatcaaagataaaacatatgcattggtatgtttgtcagagtcaactagatcatttatttagggacggagggagt 49805512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 3529264 - 3529173
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtattt 92  Q
    |||||||||||| ||||||||||| |||||||||||||| || ||||||||||||||||||| | ||| ||| |||||||||| ||||||||    
T  3529264 tagagaattgaatatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagatcattaattaagggacggagggagtattt 3529173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 23569847 - 23569937
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||  |||||||||| | ||||||| |||||||||| |||||||    
T  23569847 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttattgagggacggagggagtatt 23569937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 30529223 - 30529313
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||| ||||||||||||| ||||| |||||||||||||| ||  |||||||||||||||||||| ||||||| |||||||||| |||||||    
T  30529223 tagaaaattgaagatatctaagataaaacatatgcattggtacttgtgtcagagtcaactaggtcatttattgagggacggagggagtatt 30529313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 32565834 - 32565745
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtat 90  Q
    |||||||||||||||||||||||  |||||||||||||| || |||||||||||||||||| || || |||| | |||||||| ||||||    
T  32565834 tagagaattgaagatatcaaagagaaaacatatgcattggtacgtgtgtcagagtcaactaagtcatctattgaaggacggagggagtat 32565745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42708592 - 42708519
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttattta 74  Q
    ||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||  | |||||||||    
T  42708592 tagagaattgaagatatcaaatataaaacatatgcattggtatgtgtgtcagagtcaactaaatcatttattta 42708519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 45235021 - 45235100
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    ||||||||||||||||||||| |||||||||||||| || |||||||||||||||||| || | ||||| || |||||||    
T  45235021 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaagtcacttattcagagacggag 45235100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 47222299 - 47222233
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttattta 70  Q
    ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||||||||| |||||    
T  47222299 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcattta 47222233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29161930 - 29161853
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttaggga 78  Q
    |||| ||||||||||||||||||| ||||||||| |||| || ||||||||||||||||||| | ||||||| |||||    
T  29161930 tagaaaattgaagatatcaaagataaaacatatgaattggtacgtgtgtcagagtcaactagatcatttattgaggga 29161853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 1849784 - 1849726
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    ||||||||||||||||||||| |||||||||||||| ||| ||||| ||||||||||||    
T  1849784 agaattgaagatatcaaagataaaacatatgcattggtatatgtgttagagtcaactag 1849726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 16266250 - 16266168
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||  |||||||||| | ||||| |  |||||||||    
T  16266250 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggag 16266168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 16751627 - 16751689
Alignment:
Q  2 agagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggt 64  Q
    |||||||| |||||||||||||| |||||||||||||| || ||||||| |||||||||||||    
T  16751627 agagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggt 16751689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 37281180 - 37281102
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggac 79  Q
    ||||||||||||||||| |||||| ||||| |||||||  ||||| |||||||||||||||||| || |||| ||||||    
T  37281180 tagagaattgaagatataaaagataaaacacatgcatttgtatgtttgtcagagtcaactaggtcatctattgagggac 37281102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 50481366 - 50481276
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagtatt 91  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||| || ||||||| || || || |  ||||||||| |||||||    
T  50481366 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggaatcaactaagtcatctaatatgggacggagggagtatt 50481276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16265121 - 16265060
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||  ||||||||||    
T  16265121 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactag 16265060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26441725 - 26441664
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||  ||||||||||    
T  26441725 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactag 26441664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 38738153 - 38738214
Alignment:
Q  3 gagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggt 64  Q
    |||||||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||||    
T  38738153 gagaattgaacatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggt 38738214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 48376244 - 48376183
Alignment:
Q  3 gagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggt 64  Q
    |||||||||||||||||||||| |||||||||||||| || |||||||| ||| ||||||||    
T  48376244 gagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaaagttaactaggt 48376183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43680157 - 43680069
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| || | |||||  |||||||||| | ||||| |  ||||||||| |||||    
T  43680157 tagagaattgaagatatcaaagataaaacatatgcattggtacgcgtgtcgaagtcaactagatcatttaatatgggacggagggagta 43680069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 4605083 - 4605004
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggag 83  Q
    |||||| |||||||||||||| |||||||||||||| || ||||||| ||||||||||| | || |||  ||||||||||    
T  4605083 agaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactagatcatctatcgagggacggag 4605004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 14075818 - 14075764
Alignment:
Q  6 aattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaact 60  Q
    |||||||||||||||| || |||||||||||||| |||||||||| |||||||||    
T  14075818 aattgaagatatcaaatataaaacatatgcattggtatgtgtgtcggagtcaact 14075764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24982439 - 24982378
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    ||||||||||||||||||||| || |||||||||||||| || |||||||  ||||||||||    
T  24982439 tagagaattgaagatatcaaatataaaacatatgcattggtacgtgtgtcgaagtcaactag 24982378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31971560 - 31971621
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactag 62  Q
    |||||| ||||| ||||||||||| |||||||||||||| ||  ||||||||||||||||||    
T  31971560 tagagagttgaatatatcaaagataaaacatatgcattggtacatgtgtcagagtcaactag 31971621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3898744 - 3898832
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||| ||||||||||||||||||| |||||||||||||| || || ||||  |||||||||| | ||||| |  ||||||||| |||||    
T  3898744 tagaaaattgaagatatcaaagataaaacatatgcattggtacgtctgtcgaagtcaactagatcatttaatatgggacggagggagta 3898832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31698761 - 31698821
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    |||| |||| || |||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  31698761 tagataattaaatatattaaagattaaatatatgcattgatatgtgtgtcagagtcaacta 31698821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23330540 - 23330499
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgata 42  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  23330540 tagagaattgaagatatgaaagataaaacatatgcattgata 23330499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27990887 - 27990945
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaact 60  Q
    ||||||||||||||||| |||||||||| |||| ||||| |||||||| ||| |||||||    
T  27990887 tagagaattgaagatattaaagatgaaa-atatacattggtatgtgtgacagcgtcaact 27990945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41501781 - 41501828
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtg 48  Q
    |||||||||||| ||||||||||| |||||||||||||| || |||||    
T  41501781 tagagaattgaatatatcaaagataaaacatatgcattggtacgtgtg 41501828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 38737554 - 38737608
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaa 58  Q
    |||||| ||||||| ||| || ||| |||||||||||||| ||||||||||||||    
T  38737554 agaattaaagatattaaatataaaaaatatgcattgatatatgtgtcagagtcaa 38737608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 44281 - 44369
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| |||||    
T  44281 tagagaattgaagatatcaaagataaaacatatgcattggtatgcgtgtcagagtcaactaggtcatttatttagggacggagggagta 44369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 41390 - 41478
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  41390 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattgagggacggagggagta 41478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12840 - 12752
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||| | |||||||||||||||| |||||    
T  12840 tagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 12752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 10481 - 10393
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||| | |||||||||||||||| |||||    
T  10481 tagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 10393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14147 - 14059
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||||||||||||||| |||||||||||||| || |||| |||||||||||||||| | |||||||||||||||| |||||    
T  14147 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcagagtcaactaggtcacttatttagggacggagggagta 14059  T

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Target: scaffold0027 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 117404 - 117321
Alignment:
Q  6 aattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  117404 aattgaagatattaaagataaaacatatgcattgatatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 117321  T

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Target: scaffold0340 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 14430 - 14345
Alignment:
Q  4 agaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    ||||||||||||||||||||| ||||||||| |||  || || |||| || |||||||| ||||||||| |||||| ||| |||||    
T  14430 agaattgaagatatcaaagataaaacatatgtattagtaagtatgtcggaatcaactagattatttattgagggaccgagggagta 14345  T

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Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15389 - 15477
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaactaggttatttatttagggacggagagagta 89  Q
    ||||||||||||||||||||   | || ||||||||||| || |||||| |||||||||||||| | ||||| |||||| ||| |||||    
T  15389 tagagaattgaagatatcaacagtaaatcatatgcattggtacgtgtgttagagtcaactaggtcagttattcagggaccgagggagta 15477  T

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Target: scaffold0111 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38533 - 38593
Alignment:
Q  1 tagagaattgaagatatcaaagatgaaacatatgcattgatatgtgtgtcagagtcaacta 61  Q
    |||| ||||||||||||||||||| |||||||||||||| || || ||||  |||||||||    
T  38533 tagataattgaagatatcaaagataaaacatatgcattggtacgtatgtcgaagtcaacta 38593  T

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