View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17466_low_7 (Length: 292)

Name: NF17466_low_7
Description: NF17466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17466_low_7
NF17466_low_7
[»] scaffold0815 (1 HSPs)
scaffold0815 (2-262)||(464-720)
[»] chr7 (24 HSPs)
chr7 (131-273)||(15213668-15213810)
chr7 (140-269)||(9389829-9389958)
chr7 (131-228)||(11085013-11085110)
chr7 (131-242)||(38480237-38480348)
chr7 (131-262)||(8468294-8468425)
chr7 (131-213)||(9320470-9320552)
chr7 (131-262)||(14270167-14270298)
chr7 (131-242)||(36685991-36686102)
chr7 (131-262)||(45847763-45847894)
chr7 (131-212)||(11092767-11092848)
chr7 (141-234)||(12371434-12371527)
chr7 (131-262)||(17232488-17232619)
chr7 (131-242)||(30820997-30821108)
chr7 (132-234)||(8851959-8852061)
chr7 (141-234)||(13148275-13148368)
chr7 (135-262)||(37727672-37727799)
chr7 (141-234)||(11066624-11066717)
chr7 (132-221)||(11391920-11392009)
chr7 (141-234)||(12127967-12128060)
chr7 (134-262)||(18302035-18302163)
chr7 (179-234)||(59232-59287)
chr7 (144-234)||(32434396-32434485)
chr7 (142-197)||(15439330-15439385)
chr7 (164-193)||(39267712-39267741)
[»] chr5 (19 HSPs)
chr5 (131-273)||(36460139-36460281)
chr5 (131-273)||(21741655-21741798)
chr5 (131-242)||(12122262-12122373)
chr5 (131-242)||(21555120-21555231)
chr5 (131-234)||(21557786-21557889)
chr5 (131-213)||(24212397-24212479)
chr5 (131-213)||(35852652-35852734)
chr5 (131-262)||(5889298-5889429)
chr5 (131-262)||(29915196-29915327)
chr5 (134-213)||(30615785-30615864)
chr5 (131-213)||(17875243-17875325)
chr5 (131-242)||(31455690-31455804)
chr5 (131-242)||(31455077-31455191)
chr5 (134-218)||(21871687-21871771)
chr5 (134-218)||(21875967-21876051)
chr5 (135-213)||(5889157-5889235)
chr5 (164-193)||(21871593-21871622)
chr5 (164-193)||(21875873-21875902)
chr5 (164-193)||(22120217-22120246)
[»] scaffold0599 (2 HSPs)
scaffold0599 (131-273)||(166-308)
scaffold0599 (131-273)||(4584-4726)
[»] chr8 (15 HSPs)
chr8 (131-273)||(42560268-42560410)
chr8 (132-262)||(18760515-18760645)
chr8 (131-213)||(32807294-32807376)
chr8 (131-242)||(21579947-21580058)
chr8 (131-262)||(27472419-27472550)
chr8 (131-262)||(1327148-1327279)
chr8 (131-262)||(38550114-38550245)
chr8 (131-242)||(41680863-41680974)
chr8 (131-242)||(29763609-29763719)
chr8 (172-262)||(6102532-6102622)
chr8 (141-234)||(39936813-39936906)
chr8 (135-262)||(20982752-20982879)
chr8 (170-242)||(21415242-21415314)
chr8 (184-234)||(19128110-19128160)
chr8 (172-271)||(39833842-39833942)
[»] chr3 (22 HSPs)
chr3 (131-273)||(11912890-11913032)
chr3 (131-262)||(49969993-49970124)
chr3 (131-273)||(1465533-1465676)
chr3 (131-242)||(31415404-31415515)
chr3 (131-242)||(31224695-31224806)
chr3 (132-234)||(40811994-40812096)
chr3 (131-262)||(20630220-20630351)
chr3 (131-234)||(30175307-30175410)
chr3 (131-213)||(6808166-6808248)
chr3 (141-234)||(40807152-40807245)
chr3 (132-228)||(5841943-5842039)
chr3 (111-262)||(49389776-49389924)
chr3 (141-234)||(22307386-22307479)
chr3 (132-256)||(12269443-12269567)
chr3 (141-234)||(17538263-17538356)
chr3 (131-242)||(15447741-15447849)
chr3 (135-262)||(18439974-18440101)
chr3 (180-262)||(12852531-12852613)
chr3 (138-262)||(45797046-45797169)
chr3 (180-262)||(14501001-14501083)
chr3 (135-208)||(1988977-1989050)
chr3 (164-193)||(12852390-12852419)
[»] chr6 (15 HSPs)
chr6 (131-272)||(34297010-34297151)
chr6 (131-242)||(20734188-20734299)
chr6 (131-262)||(19399738-19399869)
chr6 (131-213)||(2201148-2201230)
chr6 (132-234)||(18927832-18927934)
chr6 (131-213)||(22420996-22421078)
chr6 (131-262)||(25956744-25956875)
chr6 (131-262)||(27851035-27851166)
chr6 (141-234)||(18708656-18708749)
chr6 (141-234)||(23151069-23151162)
chr6 (132-228)||(28708636-28708732)
chr6 (131-262)||(31630650-31630781)
chr6 (141-223)||(27322221-27322303)
chr6 (131-197)||(27851246-27851313)
chr6 (135-242)||(25956602-25956709)
[»] scaffold1137 (1 HSPs)
scaffold1137 (140-273)||(2424-2557)
[»] chr4 (19 HSPs)
chr4 (131-273)||(15099204-15099347)
chr4 (132-234)||(9923305-9923407)
chr4 (131-213)||(15880726-15880808)
chr4 (131-262)||(362113-362244)
chr4 (132-242)||(35812231-35812341)
chr4 (131-211)||(33186133-33186213)
chr4 (132-256)||(46642707-46642831)
chr4 (132-234)||(11479452-11479554)
chr4 (134-262)||(15868825-15868953)
chr4 (134-262)||(630890-631018)
chr4 (141-234)||(19609480-19609573)
chr4 (131-262)||(13844406-13844537)
chr4 (131-220)||(52873280-52873369)
chr4 (138-262)||(32851253-32851377)
chr4 (132-242)||(46642867-46642977)
chr4 (170-263)||(21189803-21189896)
chr4 (164-193)||(630796-630825)
chr4 (164-193)||(13812831-13812860)
chr4 (164-193)||(15868731-15868760)
[»] chr1 (15 HSPs)
chr1 (131-273)||(35981810-35981953)
chr1 (140-273)||(20636704-20636837)
chr1 (131-208)||(12328596-12328673)
chr1 (132-233)||(48301020-48301121)
chr1 (131-262)||(43542977-43543108)
chr1 (131-213)||(51274329-51274411)
chr1 (131-262)||(28194572-28194703)
chr1 (137-262)||(46382684-46382809)
chr1 (130-262)||(43697240-43697372)
chr1 (131-192)||(8885447-8885508)
chr1 (131-193)||(51326892-51326954)
chr1 (141-234)||(41227507-41227600)
chr1 (135-242)||(28194430-28194537)
chr1 (156-197)||(49261407-49261448)
chr1 (158-234)||(20636879-20636955)
[»] scaffold0737 (1 HSPs)
scaffold0737 (131-234)||(6419-6522)
[»] chr2 (13 HSPs)
chr2 (132-262)||(6576354-6576484)
chr2 (131-233)||(24883610-24883712)
chr2 (132-234)||(24436200-24436301)
chr2 (131-234)||(24865511-24865614)
chr2 (131-213)||(22501018-22501100)
chr2 (131-213)||(22508952-22509034)
chr2 (141-234)||(5032127-5032220)
chr2 (141-233)||(24781643-24781735)
chr2 (131-197)||(22501128-22501194)
chr2 (131-197)||(22509062-22509128)
chr2 (131-187)||(2524470-2524526)
chr2 (131-212)||(7672299-7672374)
chr2 (196-262)||(21367986-21368053)
[»] scaffold0080 (1 HSPs)
scaffold0080 (132-234)||(59347-59449)
[»] scaffold0434 (1 HSPs)
scaffold0434 (131-232)||(6800-6901)
[»] scaffold0009 (1 HSPs)
scaffold0009 (131-256)||(85121-85246)
[»] scaffold1351 (1 HSPs)
scaffold1351 (131-242)||(1566-1677)
[»] scaffold0810 (1 HSPs)
scaffold0810 (131-262)||(2912-3043)
[»] scaffold0395 (1 HSPs)
scaffold0395 (131-234)||(10903-11006)
[»] scaffold0371 (1 HSPs)
scaffold0371 (132-233)||(3073-3174)
[»] scaffold0134 (1 HSPs)
scaffold0134 (141-234)||(10029-10122)
[»] scaffold0375 (1 HSPs)
scaffold0375 (142-233)||(9106-9197)
[»] scaffold0116 (3 HSPs)
scaffold0116 (131-262)||(43907-44038)
scaffold0116 (135-242)||(43765-43872)
scaffold0116 (135-242)||(47685-47792)
[»] scaffold0071 (1 HSPs)
scaffold0071 (131-242)||(14340-14451)
[»] scaffold0802 (1 HSPs)
scaffold0802 (132-234)||(5498-5600)
[»] scaffold0335 (1 HSPs)
scaffold0335 (136-234)||(813-911)
[»] scaffold0384 (1 HSPs)
scaffold0384 (141-234)||(8189-8282)
[»] scaffold0679 (1 HSPs)
scaffold0679 (132-228)||(2471-2567)
[»] scaffold0004 (1 HSPs)
scaffold0004 (131-262)||(362872-363003)
[»] scaffold0001 (1 HSPs)
scaffold0001 (132-234)||(76898-77000)
[»] scaffold0513 (1 HSPs)
scaffold0513 (131-231)||(10992-11092)
[»] scaffold0509 (1 HSPs)
scaffold0509 (141-225)||(9561-9645)
[»] scaffold0075 (1 HSPs)
scaffold0075 (134-262)||(8410-8538)
[»] scaffold0100 (1 HSPs)
scaffold0100 (131-218)||(36171-36258)
[»] scaffold0061 (2 HSPs)
scaffold0061 (131-256)||(15468-15592)
scaffold0061 (131-256)||(24526-24650)
[»] scaffold0124 (2 HSPs)
scaffold0124 (134-262)||(24770-24898)
scaffold0124 (164-193)||(24676-24705)
[»] scaffold0586 (1 HSPs)
scaffold0586 (170-242)||(1887-1959)
[»] scaffold0235 (1 HSPs)
scaffold0235 (180-262)||(13441-13523)
[»] scaffold1792 (1 HSPs)
scaffold1792 (156-262)||(309-414)
[»] scaffold0230 (1 HSPs)
scaffold0230 (156-262)||(23486-23591)
[»] scaffold0142 (2 HSPs)
scaffold0142 (180-262)||(7811-7893)
scaffold0142 (164-193)||(7670-7699)
[»] scaffold0192 (1 HSPs)
scaffold0192 (164-193)||(9926-9955)
[»] scaffold0261 (1 HSPs)
scaffold0261 (180-228)||(18498-18546)


Alignment Details
Target: scaffold0815 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 2 - 262
Target Start/End: Complemental strand, 720 - 464
Alignment:
Q  2 tatatacgatttatgtgaagcaatttttaatatatgaggtcaaatgattatattctatttccaaattaagtagtttcatatcgatgataaattataatga 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  720 tatatacgatttatgtgaagcaatttttaatatatgagctcaaatggttatattctatttccaaattaagtagtttcatatggatgataaattataatga 621  T
Q  102 tgaattatttgattaaatgagaaaacatttatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttga 201  Q
    |||||||||||||||||||||||||    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||    
T  620 tgaattatttgattaaatgagaaaa----tatttatatattgtgaaagacgttgatatgaaattataattgttatatatgatgattattattgatggtga 525  T
Q  202 cttgctgcatattatttaatggtgttgccttgcggttgtgacatattaatatcatgaagat 262  Q
    ||||||||||||  |  |||| ||||| ||||| |||||||   ||||||||||| |||||    
T  524 cttgctgcatatgttaaaatgatgttgtcttgctgttgtgatgaattaatatcattaagat 464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 15213810 - 15213668
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15213810 tatttatatattgtgaaagacattgatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 15213711  T
Q  231 ttgcggttgtgacatattaatatcatgaagatcgaatgttggt 273  Q
    ||||||||||||| ||||||||||||||||||| |||||||||    
T  15213710 ttgcggttgtgacgtattaatatcatgaagatctaatgttggt 15213668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 140 - 269
Target Start/End: Original strand, 9389829 - 9389958
Alignment:
Q  140 attgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcggttg 239  Q
    ||||||||||| | | ||||||| | ||||| ||| ||| ||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  9389829 attgtgaaagatgcttatatgaagtcgtaatggttgtatttgacgattattgttgatgttgacttgctacatattatttaatggtgttgccttgcggttg 9389928  T
Q  240 tgacatattaatatcatgaagatcgaatgt 269  Q
    |||| ||||||||||||||||||| |||||    
T  9389929 tgacgtattaatatcatgaagatctaatgt 9389958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 131 - 228
Target Start/End: Complemental strand, 11085110 - 11085013
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttg 228  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||    
T  11085110 tatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgctgcatacgattaaatggtgttg 11085013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 38480348 - 38480237
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||  || |||| ||||| |    
T  38480348 tatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatatttaaatgatgttgtc 38480249  T
Q  231 ttgcggttgtga 242  Q
    |||| |||||||    
T  38480248 ttgctgttgtga 38480237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 8468425 - 8468294
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| ||||||| ||| |||  |||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  8468425 tatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttaatggtgttgcc 8468326  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| | |||||  |||||||||||| |||||    
T  8468325 ttgctgatgtgatgtattaatatcattaagat 8468294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 9320470 - 9320552
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatat 213  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  9320470 tatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgttgcatat 9320552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 14270167 - 14270298
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| ||||||| ||| |||  |||||||||| ||||||||||||||||| | ||||||| |||||||||||    
T  14270167 tatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgcc 14270266  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| | |||||  |||||||||||| |||||    
T  14270267 ttgctgatgtgatgtattaatatcattaagat 14270298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 36685991 - 36686102
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||| | ||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||  || |||| ||||| |    
T  36685991 tatttatatattgtgaaagacgctgatatgaagttttaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatgttgtc 36686090  T
Q  231 ttgcggttgtga 242  Q
    |||| |||||||    
T  36686091 ttgctgttgtga 36686102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 45847763 - 45847894
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| ||||||| ||| |||  |||||||||| ||||||||||||||||| | ||||||| |||||||||||    
T  45847763 tatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgcc 45847862  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| | |||||  |||||||||||| |||||    
T  45847863 ttgctgatgtgatgtattaatatcattaagat 45847894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 11092848 - 11092767
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcata 212  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  11092848 tatttatatattgtgaaagatgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgttgcata 11092767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 12371527 - 12371434
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||||||| ||| ||||||| ||||||| |||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12371527 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatggtgttgccttgc 12371434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 17232619 - 17232488
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| ||| ||| ||| |||  |||||||||| ||| ||||||||||||| ||||||||| |||||||||||    
T  17232619 tatttatatattgtgaaagatgttgatatgaagttggaatggttgtattagatgattattgttgctgttgacttgctgtatattatttgatggtgttgcc 17232520  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| | |||||  |||||||||||| |||||    
T  17232519 ttgctgatgtgatgtattaatatcattaagat 17232488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 30820997 - 30821108
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||  || |||| ||||| |    
T  30820997 tatttatatattgtgaaatacgttgatatgaagttgtaattgttatatatgatgattattattgatggtaacttgctgcatatgtttaaatgatgttgtc 30821096  T
Q  231 ttgcggttgtga 242  Q
    |||  |||||||    
T  30821097 ttgttgttgtga 30821108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 8851959 - 8852061
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    |||||||||||||||||||  || |||| || ||||||| |||||||  |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  8851959 atttatatattgtgaaagattttgatataaagttgtaatggttatatgggatgattattgttgatgttgacttactgcatattatttaatggtgttgcct 8852058  T
Q  232 tgc 234  Q
    |||    
T  8852059 tgc 8852061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 13148275 - 13148368
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||||||| ||| ||||||| ||||||| |||||||  |||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  13148275 ttgtgaaagatgttgatatgaagttgtaatggttatattagatgattattgttgatgttgacttgctgcatattatttaatggtgctgccttgc 13148368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 37727672 - 37727799
Alignment:
Q  135 tatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||| ||||||||  ||  ||||||| ||||||| ||| ||| ||||||||||| ||||||||||||||||| | ||||||| |||||||||||||||    
T  37727672 tatataatgtgaaagttgtagatatgaagttgtaatggttgtatttgatgattattgttgatgttgacttgctgtaaattatttgatggtgttgccttgc 37727771  T
Q  235 ggttgtgacatattaatatcatgaagat 262  Q
     | |||||  |||||||||||| |||||    
T  37727772 tgatgtgatgtattaatatcattaagat 37727799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 11066717 - 11066624
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||||||| ||| ||||||| ||||||| |||||||  |||||| ||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  11066717 ttgtgaaagatgttgatatgaagttgtaatagttatattggatgatcattgttgttgttgacttgctgcatattatttaatggtgctgccttgc 11066624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 11391920 - 11392009
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaat 221  Q
    ||||||||||||||||||| | | ||| ||| ||||||| |||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  11391920 atttatatattgtgaaagatgctcataagaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaat 11392009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 12127967 - 12128060
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||||||| ||| ||||||| ||||||| | |||||  || ||||||| ||||||||||||| |||||||||| ||||||||| ||||||||    
T  12127967 ttgtgaaagatgtttatatgaagttgtaatggatatattggacgattattgttgatgttgacttactgcatattagttaatggtgctgccttgc 12128060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 262
Target Start/End: Complemental strand, 18302163 - 18302035
Alignment:
Q  134 ttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttg 233  Q
    |||||||||||| | || | | ||||||| |||||||  || ||| ||||||||||| ||||||||| |||| || | ||||||| ||| ||||||||||    
T  18302163 ttatatattgtggatgaagatgatatgaagttgtaatgattgtatttgatgattattgttgatgttggcttgttgtaaattatttgatgttgttgccttg 18302064  T
Q  234 cggttgtgacatattaatatcatgaagat 262  Q
    | | |||||  |||||||||||| |||||    
T  18302063 ctgatgtgatgtattaatatcattaagat 18302035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 59232 - 59287
Alignment:
Q  179 atgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||| ||||| |||||||||||||||| |||||||||||||| |||||||||||    
T  59232 atgatgtttattgttgatgttgacttgctccatattatttaatgttgttgccttgc 59287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 32434396 - 32434485
Alignment:
Q  144 tgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    ||||||| ||| ||||||| ||||||| |||||||  ||||||||||  |||||||||||| ||| || ||||||||||||| ||||||||    
T  32434396 tgaaagatgttgatatgaagttgtaatggttatattggatgattattgctgatgttgactt-ctggattttatttaatggtgctgccttgc 32434485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 15439385 - 15439330
Alignment:
Q  142 tgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatg 197  Q
    ||||||||  ||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  15439385 tgtgaaagttgttgatatgaagttgtaattgttatatatgaagattattattgatg 15439330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 39267712 - 39267741
Alignment:
Q  164 ttgtaattgttatatatgatgattattatt 193  Q
    ||||||||||||||||||||||||||||||    
T  39267712 ttgtaattgttatatatgatgattattatt 39267741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 36460281 - 36460139
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  36460281 tatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattaatgttgacttgctgcatattatttaatggtgttgtc 36460182  T
Q  231 ttgcggttgtgacatattaatatcatgaagatcgaatgttggt 273  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  36460181 ttgcggttgtgacatattaatatcatgaagatctaatgttggt 36460139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 131 - 273
Target Start/End: Original strand, 21741655 - 21741798
Alignment:
Q  131 tatttatata-ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgc 229  Q
    |||||||||| |||||||||| | | ||||||||| ||||| ||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  21741655 tatttatataattgtgaaagatgcttatatgaaatcgtaatggttgtatttgacgattattgttgatgttgacttgctgcatattatttaatggtgttgc 21741754  T
Q  230 cttgcggttgtgacatattaatatcatgaagatcgaatgttggt 273  Q
    ||| |||||||||| ||||||||||||||||||| |||||||||    
T  21741755 cttacggttgtgacgtattaatatcatgaagatctaatgttggt 21741798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 12122262 - 12122373
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||  || |||| || || |    
T  12122262 tatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgacttgcggcatatgtttaaatgatgatgtc 12122361  T
Q  231 ttgcggttgtga 242  Q
    |||| |||||||    
T  12122362 ttgctgttgtga 12122373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 21555120 - 21555231
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| | || || |||||||||||||||||||||||||||||||||| |||||||||||||||  || |||| ||||| |    
T  21555120 tatttatatattgtgaaagacgttgacataaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatgttgtc 21555219  T
Q  231 ttgcggttgtga 242  Q
    |||| |||||||    
T  21555220 ttgctgttgtga 21555231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 21557786 - 21557889
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||  || |||| ||||| |    
T  21557786 tatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatagtgacttgctgcatatgtttaaatgatgttgtc 21557885  T
Q  231 ttgc 234  Q
    ||||    
T  21557886 ttgc 21557889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 24212479 - 24212397
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatat 213  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  24212479 tatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattaatattgatggtgacttgctgcatat 24212397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 35852734 - 35852652
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatat 213  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||    
T  35852734 tatttatatattgtgaaagacgttgatatgaaattgtaattgttatatacgatgattattattgatggtggcttgctgcatat 35852652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 5889298 - 5889429
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| | | ||||||| ||||||| ||| ||| ||||||||||| |||||| |||||||||| | ||||||| |||||||||||    
T  5889298 tatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattattgttgatgatgacttgctgtaaattatttgatggtgttgcc 5889397  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| | |||||  |||||||||||| |||||    
T  5889398 ttgctgatgtgatgtattaatatcattaagat 5889429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 29915196 - 29915327
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| ||||||| ||| |||  |||||||||| ||||||||||||||||| | |||||| ||||| ||||||    
T  29915196 tatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattattgaatggcgttgcc 29915295  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| | |||||  |||||||||||| |||||    
T  29915296 ttgctgatgtgatgtattaatatcattaagat 29915327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 30615864 - 30615785
Alignment:
Q  134 ttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatat 213  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||  |||||||||||| ||||| |||||||||||||||    
T  30615864 ttatatattgtgaaagacgttgatatgaagttgtaattgttataattgatgattattaatgatggtgacttgctgcatat 30615785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 17875325 - 17875243
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatat 213  Q
    |||||||||| ||  ||||||||| ||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||    
T  17875325 tatttatataatgataaagacgttgatatgaagttctaattgttatatatgatgattattattgatggtgacttgctgcatat 17875243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 31455804 - 31455690
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatga---tgattattattgatgttgacttgctgcatattatttaatggtgtt 227  Q
    |||||||||||||||||| ||||| ||||||| ||||||| |||||| ||||   ||||||||||||||| |||||||||||||||  || |||| ||||    
T  31455804 tatttatatattgtgaaaaacgttgatatgaagttgtaatcgttataaatgatattgattattattgatggtgacttgctgcatatgtttaaatgatgtt 31455705  T
Q  228 gccttgcggttgtga 242  Q
    | ||||| |||||||    
T  31455704 gtcttgctgttgtga 31455690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 31455191 - 31455077
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatga---tgattattattgatgttgacttgctgcatattatttaatggtgtt 227  Q
    |||||||||||||||||| ||||| |||| || ||||||| |||||| ||||   ||||||||||||||| ||||||| |||||||  || |||| ||||    
T  31455191 tatttatatattgtgaaaaacgttgatattaagttgtaatcgttataaatgatattgattattattgatggtgacttgatgcatatgtttaaatgatgtt 31455092  T
Q  228 gccttgcggttgtga 242  Q
    | ||||| |||||||    
T  31455091 gtcttgctgttgtga 31455077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 21871687 - 21871771
Alignment:
Q  134 ttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattattt 218  Q
    |||||||||||||| || | | ||||||| |||||||  || ||| ||||||||||| ||||||||||||||||||| |||||||    
T  21871687 ttatatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattattgttgatgttgacttgctgcaaattattt 21871771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 21875967 - 21876051
Alignment:
Q  134 ttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattattt 218  Q
    |||||||||||||| || | | ||||||| |||||||  || ||| ||||||||||| ||||||||||||||||||| |||||||    
T  21875967 ttatatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattattgttgatgttgacttgctgcaaattattt 21876051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 5889157 - 5889235
Alignment:
Q  135 tatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatat 213  Q
    |||||| ||||||||  ||| ||||| | ||| |||||||||| |||| |||||||||||||| | |||||||| ||||    
T  5889157 tatataatgtgaaagttgttgatatgtagttgcaattgttatacatgaagattattattgatggttacttgctgtatat 5889235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 21871593 - 21871622
Alignment:
Q  164 ttgtaattgttatatatgatgattattatt 193  Q
    ||||||||||||||||||||||||||||||    
T  21871593 ttgtaattgttatatatgatgattattatt 21871622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 21875873 - 21875902
Alignment:
Q  164 ttgtaattgttatatatgatgattattatt 193  Q
    ||||||||||||||||||||||||||||||    
T  21875873 ttgtaattgttatatatgatgattattatt 21875902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 22120217 - 22120246
Alignment:
Q  164 ttgtaattgttatatatgatgattattatt 193  Q
    ||||||||||||||||||||||||||||||    
T  22120217 ttgtaattgttatatatgatgattattatt 22120246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 308 - 166
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  308 tatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgattattattattgatgttgacttgatgcatattatttaatggtgttgcc 209  T
Q  231 ttgcggttgtgacatattaatatcatgaagatcgaatgttggt 273  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  208 ttgcggttgtgacatattaatttcatgaagatctaatgttggt 166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 4726 - 4584
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  4726 tatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgattattattattgatgttgacttgatgcatattatttaatggtgttgcc 4627  T
Q  231 ttgcggttgtgacatattaatatcatgaagatcgaatgttggt 273  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  4626 ttgcggttgtgacatattaatttcatgaagatctaatgttggt 4584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 131 - 273
Target Start/End: Original strand, 42560268 - 42560410
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42560268 tatttatatattgtgaaatacgttgatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttacc 42560367  T
Q  231 ttgcggttgtgacatattaatatcatgaagatcgaatgttggt 273  Q
    ||||||||||||| ||||||||||||||||||| |||||||||    
T  42560368 ttgcggttgtgacgtattaatatcatgaagatctaatgttggt 42560410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 132 - 262
Target Start/End: Complemental strand, 18760645 - 18760515
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    ||||||||||||||||||| ||| ||||||| || |||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  18760645 atttatatattgtgaaagatgttgatatgaagttataatggttatatttgatgattattgttgatgttgacttgctgcatattatttaatggtgatgcct 18760546  T
Q  232 tgcggttgtgacatattaatatcatgaagat 262  Q
    |||  ||||||  |||||||||||| |||||    
T  18760545 tgctattgtgatgtattaatatcattaagat 18760515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 32807376 - 32807294
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatat 213  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32807376 tatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgctgcatat 32807294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 21579947 - 21580058
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||  || |||| ||||| |    
T  21579947 tatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgataattattattgatggtgacttgctgcatatgtttaaatgatgttgtc 21580046  T
Q  231 ttgcggttgtga 242  Q
    |||| |||||||    
T  21580047 ttgctgttgtga 21580058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 27472419 - 27472550
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| ||||||| ||| |||  |||||||||| ||||||||||||||||| | ||||||| |||||||||||    
T  27472419 tatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgcc 27472518  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| | |||||  |||||||||||| |||||    
T  27472519 ttgctgatgtgatgtattaatatcattaagat 27472550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 1327148 - 1327279
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    ||||||||||||||||| || ||| ||||||| ||||||| ||| |||  |||||||||| ||||||||||||||||| | ||||||| |||||||||||    
T  1327148 tatttatatattgtgaacgatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgcc 1327247  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| | |||||  |||||||||||| |||||    
T  1327248 ttgctgatgtgatgtattaatatcattaagat 1327279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 38550114 - 38550245
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| ||||||| ||| |||  |||||||||| ||||||||||||||||| | ||||||| ||||||||| |    
T  38550114 tatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgtc 38550213  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| | |||||  |||||||||||| |||||    
T  38550214 ttgctgatgtgatgtattaatatcattaagat 38550245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 41680863 - 41680974
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    ||||||||||||||||||||  || |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||  || ||||||| || |    
T  41680863 tatttatatattgtgaaagatattgatatcaaattgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatggtgatgtc 41680962  T
Q  231 ttgcggttgtga 242  Q
    |||  |||||||    
T  41680963 ttgttgttgtga 41680974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 29763609 - 29763719
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||||||  || |||| || || |    
T  29763609 tatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 29763707  T
Q  231 ttgcggttgtga 242  Q
    |||| |||||||    
T  29763708 ttgctgttgtga 29763719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 262
Target Start/End: Original strand, 6102532 - 6102622
Alignment:
Q  172 gttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcggttgtgacatattaatatcatgaagat 262  Q
    ||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||| |||||||  |||||||||||| |||||    
T  6102532 gttatatttgatgattgttgttgatgttgacttgctccatattatttaatggtgttgccttgctgttgtgatgtattaatatcattaagat 6102622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 39936813 - 39936906
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||||||| ||| ||||||| ||||||| |||||||  |||||||||| || ||||||||||||||||||||||||||||||| ||||||||    
T  39936813 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttaatgttgacttgctgcatattatttaatggtgctgccttgc 39936906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 20982752 - 20982879
Alignment:
Q  135 tatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    ||||||||||||||||  || ||||||| ||||||| ||| |||  |||||||||| |||||||||| |||||| | ||||||| |||||||||||||||    
T  20982752 tatatattgtgaaagatattgatatgaagttgtaatggttgtattagatgattattgttgatgttgatttgctgtaaattatttgatggtgttgccttgc 20982851  T
Q  235 ggttgtgacatattaatatcatgaagat 262  Q
     | |||||  |||||||||||| |||||    
T  20982852 tgatgtgatgtattaatatcattaagat 20982879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 21415242 - 21415314
Alignment:
Q  170 ttgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcggttgtga 242  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||||  ||| ||||||||||| |||||||    
T  21415242 ttgttgtatatgatgattattattgttgttgacttgctgcttattattatatgatgttgccttgctgttgtga 21415314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 19128160 - 19128110
Alignment:
Q  184 gattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  19128160 gattattgttgatgttgacttgctgcatattatttaatggtgctgccttgc 19128110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 271
Target Start/End: Complemental strand, 39833942 - 39833842
Alignment:
Q  172 gttatatatgatgattattattgatgttgacttgctgcatattatttaatggtg-ttgccttgcggttgtgacatattaatatcatgaagatcgaatgtt 270  Q
    ||||||||||| |||||||||||||| | ||| |||| ||||  || |||| || ||||||||| | |||||  ||||||||||||||||||| ||||||    
T  39833942 gttatatatgaagattattattgatggttactcgctgtatatgtttaaatgatgattgccttgctgatgtgatgtattaatatcatgaagatctaatgtt 39833843  T
Q  271 g 271  Q
    |    
T  39833842 g 39833842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 3e-63; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 11913032 - 11912890
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  11913032 tatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgattattattattgatgttgacttgatgcatattatttaatggtgttgcc 11912933  T
Q  231 ttgcggttgtgacatattaatatcatgaagatcgaatgttggt 273  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  11912932 ttgcggttgtgacatattaatttcatgaagatctaatgttggt 11912890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 49969993 - 49970124
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| ||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||  ||||    
T  49969993 tatttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgattattgttgatgttgacttgctgcatattatttaatggtactgcc 49970092  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| |||||||  ||||| |||||| |||||    
T  49970093 ttgctgttgtgatgtattattatcattaagat 49970124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 131 - 273
Target Start/End: Original strand, 1465533 - 1465676
Alignment:
Q  131 tatttatata-ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgc 229  Q
    |||||||||| |||||||||| | | ||||||| | ||||| |||  || ||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  1465533 tatttatataattgtgaaagatgcttatatgaagtcgtaatggttggatttgacgattattgttgatgttgacttgctgcatattatttaatggtgttgc 1465632  T
Q  230 cttgcggttgtgacatattaatatcatgaagatcgaatgttggt 273  Q
    |||| ||||||| | ||||||||||||||||||| |||||||||    
T  1465633 cttgtggttgtggcgtattaatatcatgaagatctaatgttggt 1465676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 31415515 - 31415404
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||  || |||| ||||| |    
T  31415515 tatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatgttgtc 31415416  T
Q  231 ttgcggttgtga 242  Q
    |||| |||||||    
T  31415415 ttgctgttgtga 31415404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 31224695 - 31224806
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||  || |||| ||||| |    
T  31224695 tatttatataatgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatgttgtc 31224794  T
Q  231 ttgcggttgtga 242  Q
    |||| |||||||    
T  31224795 ttgctgttgtga 31224806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 40812096 - 40811994
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    ||||||||||||||||||| ||| ||||||| ||||||| |||||||  |||||||||| |||||||||||||||||||||||||||||||||| ||| |    
T  40812096 atttatatattgtgaaagatgttgatatgaagttgtaatggttatatgggatgattattgttgatgttgacttgctgcatattatttaatggtgctgctt 40811997  T
Q  232 tgc 234  Q
    |||    
T  40811996 tgc 40811994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 20630220 - 20630351
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| ||||||| ||| |||  |||||||||| ||||||||||||||||| | ||||||| ||| |||||||    
T  20630220 tatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatgttgttgcc 20630319  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| | |||||  |||||||||||| |||||    
T  20630320 ttgctgatgtgatgtattaatatcattaagat 20630351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 30175307 - 30175410
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||| ||||||||| ||| ||||||| ||||||| | |||||  |||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  30175307 tatttatatactgtgaaagatgttgatatgaagttgtaatggatatatgggatgattattgttgatgttgacttgcttcatattatttaatggtgttgcc 30175406  T
Q  231 ttgc 234  Q
    ||||    
T  30175407 ttgc 30175410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 6808248 - 6808166
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatat 213  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||| || |||||    
T  6808248 tatttatatattgtgaaagacgttgatatgaaattgtaattgttatatataatgattattattgatggtgacttccttcatat 6808166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 40807245 - 40807152
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||||||| ||| ||||||| ||||||| |||||||  |||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  40807245 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatggtgctgccttgc 40807152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 5842039 - 5841943
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttg 228  Q
    ||||||||||||||||||| | | ||| ||| ||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  5842039 atttatatattgtgaaagatgctcataagaagttgtaatggttatatttgatgattattgttgatgttgacttgctgcatattatttaatagtgttg 5841943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 262
Target Start/End: Original strand, 49389776 - 49389924
Alignment:
Q  111 tgattaaatgagaaaacatttatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgca 210  Q
    |||||||||| ||||| |||||   |||||||||||| |  ||| ||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| |    
T  49389776 tgattaaatgtgaaaatatttag--atatattgtgaa-gttgttgatatgaagttgtaattgttatatttgatgattattgttgatgttgacttgctgta 49389872  T
Q  211 tattatttaatggtgttgccttgcggttgtgacatattaatatcatgaagat 262  Q
     ||||||| ||||||||||||||| | |||||  | |||||||||| |||||    
T  49389873 aattatttgatggtgttgccttgctgatgtgatgtgttaatatcattaagat 49389924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 22307386 - 22307479
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||||||| ||| ||||||| |||||||  ||||||  |||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  22307386 ttgtgaaagatgttgatatgaagttgtaatgattatattggatgattattgttgatgttgacttgctgcatattatttaatggtgctgccttgc 22307479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 132 - 256
Target Start/End: Complemental strand, 12269567 - 12269443
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    ||||||| ||| |||| |||||| ||||||| |||||||  |||||| ||||||||||| ||||||||||| |||||||||||| ||||| |||||||||    
T  12269567 atttataaattttgaaggacgttgatatgaagttgtaatgattatatttgatgattattgttgatgttgacgtgctgcatattagttaatagtgttgcct 12269468  T
Q  232 tgcggttgtgacatattaatatcat 256  Q
    ||| || |||   ||||||||||||    
T  12269467 tgcagtcgtggtctattaatatcat 12269443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 17538356 - 17538263
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||||||| ||| ||||||| ||||| |  ||||||  |||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  17538356 ttgtgaaagatgttgatatgaagttgtattgattatattggatgattattgttgatgttgacttgctgcatattatttaatggtgctgccttgc 17538263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 15447741 - 15447849
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||| ||||| ||||||||||||| ||||||| |||||||||||||||   |||||||||||||||| ||||||| |||||||  || |||| ||||| |    
T  15447741 tattcatataatgtgaaagacgttgatatgaagttgtaattgttatat---atgattattattgatggtgacttgatgcatatgtttaaatgatgttgtc 15447837  T
Q  231 ttgcggttgtga 242  Q
    |||| |||||||    
T  15447838 ttgctgttgtga 15447849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 18439974 - 18440101
Alignment:
Q  135 tatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||||||||||||| | | ||||||| ||||||| ||| ||| ||||||||||| |||||| |||| ||||| | ||||||| ||||||||| |||||    
T  18439974 tatatattgtgaaagatgatgatatgaagttgtaatggttgtatttgatgattattgttgatgatgacctgctgtaaattatttgatggtgttgtcttgc 18440073  T
Q  235 ggttgtgacatattaatatcatgaagat 262  Q
     |  ||||  |||||||||||| |||||    
T  18440074 tgaggtgatgtattaatatcattaagat 18440101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 12852531 - 12852613
Alignment:
Q  180 tgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcggttgtgacatattaatatcatgaagat 262  Q
    ||||||||||| ||||||||||||||||| | ||||||| ||| ||||||||||| | |||||  |||||||||||| |||||    
T  12852531 tgatgattattgttgatgttgacttgctgtaaattatttgatgttgttgccttgctgatgtgatgtattaatatcattaagat 12852613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 262
Target Start/End: Complemental strand, 45797169 - 45797046
Alignment:
Q  138 atattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcggt 237  Q
    |||||||||| || | | ||||||| |||||||   | ||| ||||||||||| |||||||||||||| |||| ||||| | ||| ||||||||||| |     
T  45797169 atattgtgaatgatgatgatatgaagttgtaatgaatgtatttgatgattattgttgatgttgacttgttgca-attatatgatgttgttgccttgctga 45797071  T
Q  238 tgtgacatattaatatcatgaagat 262  Q
    ||||| ||||||||||||| |||||    
T  45797070 tgtgatatattaatatcattaagat 45797046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 14501083 - 14501001
Alignment:
Q  180 tgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcggttgtgacatattaatatcatgaagat 262  Q
    ||||||||||| |||||||||||||| |||| ||||| | ||| |||||||||||   ||||| ||||||||||||| |||||    
T  14501083 tgatgattattgttgatgttgacttgttgcaaattatatgatgttgttgccttgctaatgtgatatattaatatcattaagat 14501001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 1988977 - 1989050
Alignment:
Q  135 tatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctg 208  Q
    |||||| ||||||||  ||| ||||||| ||||||| ||| ||| ||||||||||| |||||||||||||||||    
T  1988977 tatataatgtgaaagttgttgatatgaagttgtaatggttgtatttgatgattattgttgatgttgacttgctg 1989050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 12852390 - 12852419
Alignment:
Q  164 ttgtaattgttatatatgatgattattatt 193  Q
    ||||||||||||||||||||||||||||||    
T  12852390 ttgtaattgttatatatgatgattattatt 12852419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 1e-62; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 131 - 272
Target Start/End: Original strand, 34297010 - 34297151
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  34297010 tatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattaatgttgacttgctgcatattatttaatggtgtttcc 34297109  T
Q  231 ttgcggttgtgacatattaatatcatgaagatcgaatgttgg 272  Q
    ||||||||||||| ||||||||||||||||||| ||||||||    
T  34297110 ttgcggttgtgacgtattaatatcatgaagatctaatgttgg 34297151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 20734188 - 20734299
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  || |||||||||| |    
T  20734188 tatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatggtgttgtc 20734287  T
Q  231 ttgcggttgtga 242  Q
    |||| |||||||    
T  20734288 ttgctgttgtga 20734299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 19399869 - 19399738
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| ||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||  ||||    
T  19399869 tatttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgattattgttgatgttgacttgctgcatattatttaatggttctgcc 19399770  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    ||||  ||||||  ||||| |||||| |||||    
T  19399769 ttgcttttgtgatgtattattatcattaagat 19399738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 2201230 - 2201148
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatat 213  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2201230 tatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgctgcatat 2201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 18927934 - 18927832
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    ||||||||||||||||||| ||| ||||||| ||||||| |||||||  |||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  18927934 atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatggtgctgcct 18927835  T
Q  232 tgc 234  Q
    |||    
T  18927834 tgc 18927832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 22421078 - 22420996
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatat 213  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  22421078 tatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatagtgacttgttgcatat 22420996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 25956744 - 25956875
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| | | ||||||| ||||||| ||| ||| ||||||||||| |||||| |||||||||| | ||||||| ||| |||||||    
T  25956744 tatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattattgttgatgatgacttgctgtaaattatttgatgatgttgcc 25956843  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| | |||||  |||||||||||| |||||    
T  25956844 ttgctgatgtgatgtattaatatcattaagat 25956875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 27851166 - 27851035
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| | | ||||||| ||||| | ||| ||| ||||||||||| | ||||||||||||||||| ||||||| |||||||||||    
T  27851166 tatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgattattgtcgatgttgacttgctgcaaattatttgatggtgttgcc 27851067  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    || | | |||||  |||||||||||| |||||    
T  27851066 ttactgatgtgatgtattaatatcattaagat 27851035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 18708749 - 18708656
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||||||| ||| ||||||| ||||||| |||||||  |||||||||| || ||||||||||||||||||||||||||||||| ||||||||    
T  18708749 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgtttatgttgacttgctgcatattatttaatggtgatgccttgc 18708656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 23151069 - 23151162
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||||||| ||| ||||||| ||||||| |||||||  |||||||||| || ||||||||||||||||||||||||||||||| ||||||||    
T  23151069 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttaatgttgacttgctgcatattatttaatggtgctgccttgc 23151162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 28708732 - 28708636
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttg 228  Q
    ||||||||||||||||||| | | ||| ||| ||||||| |||||||  |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  28708732 atttatatattgtgaaagatgctcataagaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatagtgttg 28708636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 31630650 - 31630781
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| || |||| ||| |||  |||||||||| ||||||||||||||||| | ||||||| ||||||||| |    
T  31630650 tatttatatattgtgaaagatgttgatatgaagttataatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgtc 31630749  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||  | |||||  |||||||||||| |||||    
T  31630750 ttgttgatgtgatgtattaatatcattaagat 31630781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 27322221 - 27322303
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatgg 223  Q
    |||||||||| ||| ||||||| ||||||| |||||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  27322221 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatgg 27322303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 27851313 - 27851246
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaa-ttgttatatatgatgattattattgatg 197  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  27851313 tatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaagattattattgatg 27851246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 242
Target Start/End: Original strand, 25956602 - 25956709
Alignment:
Q  135 tatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||| ||||||||  ||| ||||| | ||| || |||||||||||| |||||||||||||| | |||||||| ||||  || |||| ||||| |||||    
T  25956602 tatataatgtgaaagttgttgatatggagttgcaaatgttatatatgaagattattattgatggttacttgctgtatatgtttaaatgatgttgtcttgc 25956701  T
Q  235 ggttgtga 242  Q
     |||||||    
T  25956702 tgttgtga 25956709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 2424 - 2557
Alignment:
Q  140 attgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcggttg 239  Q
    ||||||||||| ||| ||||||| | ||||| ||| ||| ||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  2424 attgtgaaagatgtttatatgaagtcgtaatggttgtatttgacgattattgttgatgttgacttgctgcattttatttaatggtgttgccttgcggttg 2523  T
Q  240 tgacatattaatatcatgaagatcgaatgttggt 273  Q
    |||| ||||||||||||||||||| |||||||||    
T  2524 tgacgtattaatatcatgaagatctaatgttggt 2557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 6e-40; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 15099347 - 15099204
Alignment:
Q  131 tatttatata-ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgc 229  Q
    |||||||||| |||||||||| | | ||||||| | ||||| ||| ||| ||| ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  15099347 tatttatataattgtgaaagatgcttatatgaagtcgtaatggttgtatttgacgattattgttgatgttgacttgctgcatactatttaatggtgttgc 15099248  T
Q  230 cttgcggttgtgacatattaatatcatgaagatcgaatgttggt 273  Q
    |||||||||||||| ||||||||||||||||||| |||||||||    
T  15099247 cttgcggttgtgacgtattaatatcatgaagatctaatgttggt 15099204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 9923407 - 9923305
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    ||||||||||||||||||| ||| ||||||| ||||||| |||||||  |||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  9923407 atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatggtgctgcct 9923308  T
Q  232 tgc 234  Q
    |||    
T  9923307 tgc 9923305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 15880808 - 15880726
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatat 213  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  15880808 tatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgctacatat 15880726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 362244 - 362113
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| ||||||| || |||| ||| |||  |||||||||| ||||||||||||||||| | ||||||| |||||||||||    
T  362244 tatttatatattgtgaaagacgttgatatgaagttataatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgcc 362145  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| | |||||  |||||||||||| |||||    
T  362144 ttgctgatgtgatgtattaatatcattaagat 362113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 35812231 - 35812341
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    ||||||||||||||||||| ||| ||||||| ||||||| |||||||  |||||||||| ||||||||||||||||||||||||| ||||| ||||| ||    
T  35812231 atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatctaatgatgttgtct 35812330  T
Q  232 tgcggttgtga 242  Q
    ||| |||||||    
T  35812331 tgctgttgtga 35812341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 33186213 - 33186133
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcat 211  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  33186213 tatttatatattatgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcat 33186133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 256
Target Start/End: Complemental strand, 46642831 - 46642707
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    ||||||| | ||||||||||||| ||||||| ||||||| ||||||| ||||||||||| ||||||||||| |||||||||||| ||||| |||||||||    
T  46642831 atttataaactgtgaaagacgttgatatgaagttgtaatggttatatttgatgattattgttgatgttgacgtgctgcatattagttaatagtgttgcct 46642732  T
Q  232 tgcggttgtgacatattaatatcat 256  Q
    ||| || |||   ||||||||||||    
T  46642731 tgccgtcgtggtgtattaatatcat 46642707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 11479452 - 11479554
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    ||||||||||||||||||| ||| ||||||| ||||||| |||||||  |||||||||| |||||||||||||||||||||||| ||||||| | |||||    
T  11479452 atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattacttaatggcgctgcct 11479551  T
Q  232 tgc 234  Q
    |||    
T  11479552 tgc 11479554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 262
Target Start/End: Original strand, 15868825 - 15868953
Alignment:
Q  134 ttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttg 233  Q
    |||||||||||||| || | | ||||||| |||||||  |||||| ||||||||||| ||||||||||||||||||| ||||||| ||| ||||||||||    
T  15868825 ttatatattgtgaatgatgatgatatgaagttgtaatgattatatctgatgattattgttgatgttgacttgctgcaaattatttgatgttgttgccttg 15868924  T
Q  234 cggttgtgacatattaatatcatgaagat 262  Q
    | | |||||  |||||||||||| |||||    
T  15868925 ctgatgtgatgtattaatatcattaagat 15868953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 134 - 262
Target Start/End: Original strand, 630890 - 631018
Alignment:
Q  134 ttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttg 233  Q
    |||||||||||||| || | | ||||||| |||||||  || ||| ||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||    
T  630890 ttatatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattattattgatgttgacttgctgcaaattatttgattttgttgccttg 630989  T
Q  234 cggttgtgacatattaatatcatgaagat 262  Q
    | | |||||  |||||||||||| |||||    
T  630990 ctgatgtgatgtattaatatcattaagat 631018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 19609573 - 19609480
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||||||| ||| ||||||| ||||||| |||||||  |||||||||| |||||||||||||| | ||||||||||||||||| ||||||||    
T  19609573 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgttacatattatttaatggtgctgccttgc 19609480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 13844537 - 13844406
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| | | ||||||| ||||||| ||| ||| |||| |||||| |||||| |||||||||  | ||||||| |||||||||||    
T  13844537 tatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgattattattgttgatgatgacttgctataaattatttgatggtgttgcc 13844438  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||  | |||||  |||||||||||| |||||    
T  13844437 ttgttgatgtgatgtattaatatcattaagat 13844406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 52873280 - 52873369
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaa 220  Q
    |||||||||||||||||||| ||| ||||||| ||||||| ||| |||  |||||||||| ||||||||||||||||| | |||||||||    
T  52873280 tatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttaa 52873369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 262
Target Start/End: Complemental strand, 32851377 - 32851253
Alignment:
Q  138 atattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcggt 237  Q
    |||||||||| || | | ||||||| |||||||   | ||| ||||||||||| |||||||||||||| |||| ||||| | ||| ||||||||||| |     
T  32851377 atattgtgaatgatgatgatatgaagttgtaatgaatgtatttgatgattattgttgatgttgacttgttgcaaattatatgatgttgttgccttgctga 32851278  T
Q  238 tgtgacatattaatatcatgaagat 262  Q
    ||||| ||||||||||||| |||||    
T  32851277 tgtgatatattaatatcattaagat 32851253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 242
Target Start/End: Complemental strand, 46642977 - 46642867
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    ||||||||||||||||||  ||||||||||| |||||||||||| |||||| || |||||||| || | ||||| || ||||  || |||| || |||||    
T  46642977 atttatatattgtgaaagttgttaatatgaagttgtaattgttacatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgctgcct 46642878  T
Q  232 tgcggttgtga 242  Q
    ||| |||||||    
T  46642877 tgctgttgtga 46642867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 21189803 - 21189896
Alignment:
Q  170 ttgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcggttgtgacatattaatatcatgaagatc 263  Q
    ||||| ||||||||||||||||||| || ||||||||||| ||||||| | |  ||||||||||  ||||| |  ||||||| |||| ||||||    
T  21189803 ttgttgtatatgatgattattattgttggtgacttgctgcttattattaactaatgttgccttgttgttgtaaagtattaatgtcattaagatc 21189896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 630796 - 630825
Alignment:
Q  164 ttgtaattgttatatatgatgattattatt 193  Q
    ||||||||||||||||||||||||||||||    
T  630796 ttgtaattgttatatatgatgattattatt 630825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 13812831 - 13812860
Alignment:
Q  164 ttgtaattgttatatatgatgattattatt 193  Q
    ||||||||||||||||||||||||||||||    
T  13812831 ttgtaattgttatatatgatgattattatt 13812860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 15868731 - 15868760
Alignment:
Q  164 ttgtaattgttatatatgatgattattatt 193  Q
    ||||||||||||||||||||||||||||||    
T  15868731 ttgtaattgttatatatgatgattattatt 15868760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 6e-40; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 131 - 273
Target Start/End: Original strand, 35981810 - 35981953
Alignment:
Q  131 tatttatata-ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgc 229  Q
    |||||||||| |||||||||| | | ||||||| | ||||| ||| ||| ||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  35981810 tatttatataattgtgaaagatgcttatatgaagtcgtaatggttgtatttgacgattattgttgatgttgacttgttgcatattatttaatggtgttgc 35981909  T
Q  230 cttgcggttgtgacatattaatatcatgaagatcgaatgttggt 273  Q
    |||||||||||||| ||||||||||||||||||| |||||||||    
T  35981910 cttgcggttgtgacgtattaatatcatgaagatctaatgttggt 35981953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 140 - 273
Target Start/End: Complemental strand, 20636837 - 20636704
Alignment:
Q  140 attgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcggttg 239  Q
    ||||||||||| ||| ||||||| | ||||| ||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||  ||||    
T  20636837 attgtgaaagatgtttatatgaagtcgtaatggttgtatttgacgattattgttgatgttgacttgctgcatattatttaatggtgttgccctgttgttg 20636738  T
Q  240 tgacatattaatatcatgaagatcgaatgttggt 273  Q
    |||  ||||||||||||||||||| |||||||||    
T  20636737 tgatgtattaatatcatgaagatctaatgttggt 20636704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 12328596 - 12328673
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctg 208  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  12328596 tatttatatattgtgaaagacgttgatatgaagatgtaattgttatatatgatgattattattgatggtgacttgctg 12328673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 48301121 - 48301020
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    ||||||||||||||||||| ||| ||||||| ||||||| |||| ||  ||| |||||| ||||||||||||||||||||||||||||||||||||| ||    
T  48301121 atttatatattgtgaaagatgttgatatgaagttgtaatggttacatgagattattattgttgatgttgacttgctgcatattatttaatggtgttgtct 48301022  T
Q  232 tg 233  Q
    ||    
T  48301021 tg 48301020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 43543108 - 43542977
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| |||||||  || |||  |||||||||| ||||||||||||||||| | ||||||| |||||||||||    
T  43543108 tatttatatattgtgaaagatgttgatatgaagttgtaatgattgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgcc 43543009  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| | ||| |  |||||||||||| |||||    
T  43543008 ttgctgatgtcatgtattaatatcattaagat 43542977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 51274329 - 51274411
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatat 213  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  51274329 tatttatatattgtgaaagatgttgatatgaagttgtaattgttatataagatgattattattgatggtgacttgatgcatat 51274411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 28194572 - 28194703
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| ||||||| ||| ||| ||||||||||| |||||| | || ||||| | ||||||| |||||||||||    
T  28194572 tatttatatattgtgaaagatgttgatatgaagttgtaatggttgtatttgatgattattgttgatgataacctgctgtaaattatttgatggtgttgcc 28194671  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| |  ||||  |||||||||||| |||||    
T  28194672 ttgctgaggtgatgtattaatatcattaagat 28194703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 46382684 - 46382809
Alignment:
Q  137 tatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcgg 236  Q
    |||||||||||||| ||| ||||||| ||||||| ||| |||  |||||||||| ||||||||||||||||| | ||||||| ||||||||||| ||| |    
T  46382684 tatattgtgaaagatgttgatatgaagttgtaatggttttattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgccatgctg 46382783  T
Q  237 ttgtgacatattaatatcatgaagat 262  Q
     ||| |  |||||||||||| |||||    
T  46382784 atgtaatgtattaatatcattaagat 46382809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 262
Target Start/End: Complemental strand, 43697372 - 43697240
Alignment:
Q  130 ttatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgc 229  Q
    ||||| ||||||||||||||| | | ||||||| ||||||| ||| ||| ||||||||||| |||||| |||||||||| | ||||||| |||||||| |    
T  43697372 ttattgatatattgtgaaagatgctgatatgaagttgtaatggttttatttgatgattattgttgatgatgacttgctgtaaattatttgatggtgttac 43697273  T
Q  230 cttgcggttgtgacatattaatatcatgaagat 262  Q
    ||||  | |||||  |||||||||||| |||||    
T  43697272 cttgttgatgtgatgtattaatatcattaagat 43697240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 8885508 - 8885447
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattat 192  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  8885508 tatttatatattgtgaaagacgttgatatgaaattgtaattgtaatatatgatgattgttat 8885447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 51326954 - 51326892
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattatt 193  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||| |||||||||||    
T  51326954 tatttatatattatgaaagacgttgatatgaagttgtaattgttatatatgttgattattatt 51326892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 41227507 - 41227600
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||||||| ||| ||||||| || |||| |||||||  |||||||||| || |||||||||||||||||| |||||||| ||| ||||||||    
T  41227507 ttgtgaaagatgtttatatgaagttttaatggttatattggatgattattgttaatgttgacttgctgcataatatttaattgtgctgccttgc 41227600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 242
Target Start/End: Original strand, 28194430 - 28194537
Alignment:
Q  135 tatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||| ||||||||  ||| ||||| | ||| || |||||||||||| |||||||||||||| | |||||||| ||||  || |||| ||||| |||||    
T  28194430 tatataatgtgaaagttgttgatatgtagttgcaaatgttatatatgaagattattattgatggttacttgctgtatatgtttaaatgatgttgtcttgc 28194529  T
Q  235 ggttgtga 242  Q
     |||||||    
T  28194530 tgttgtga 28194537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 49261448 - 49261407
Alignment:
Q  156 atatgaaattgtaattgttatatatgatgattattattgatg 197  Q
    ||||||| |||||||||||||| |||| ||||||||||||||    
T  49261448 atatgaagttgtaattgttatacatgaagattattattgatg 49261407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 20636955 - 20636879
Alignment:
Q  158 atgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    ||||| |||||||||||||| ||||  ||||||||||||| | |||||||| ||||  || |||| ||||| |||||    
T  20636955 atgaagttgtaattgttatacatgaatattattattgatggttacttgctgtatatgtttaaatgatgttgtcttgc 20636879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 6419 - 6522
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  || |||||||||| |    
T  6419 tatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatggtgttgtc 6518  T
Q  231 ttgc 234  Q
    ||||    
T  6519 ttgc 6522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 6e-37; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 132 - 262
Target Start/End: Complemental strand, 6576484 - 6576354
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    ||||||||||||||||||| ||| ||||||| ||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  6576484 atttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgattattgttgatgttgacttgctgcatattatttaatggtgctgcct 6576385  T
Q  232 tgcggttgtgacatattaatatcatgaagat 262  Q
    |||  ||||||  || ||||||||| |||||    
T  6576384 tgctattgtgatgtaataatatcattaagat 6576354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 24883712 - 24883610
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| ||||||| |||||||  |||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  24883712 tatttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatggtgctgcc 24883613  T
Q  231 ttg 233  Q
    |||    
T  24883612 ttg 24883610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 24436301 - 24436200
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||| ||  ||||||| || |||||||||||||||||||||||||||||||||| |||||    
T  24436301 atttatatattgtgaaagatgttgatatgaaattgtaatggttacattggatgatt-ttgttgatgttgacttgctgcatattatttaatggtgctgcct 24436203  T
Q  232 tgc 234  Q
    |||    
T  24436202 tgc 24436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 24865511 - 24865614
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||| |||||||  || |||| ||||| |    
T  24865511 tatttatatattgtgaaagatgttgatatgaagttgtaattgttatataagatgattattattgatggtgacttgatgcatatgtttaaatgatgttgtc 24865610  T
Q  231 ttgc 234  Q
    ||||    
T  24865611 ttgc 24865614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 22501100 - 22501018
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatat 213  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||| |||||||| |||||||| | |||||||||||||    
T  22501100 tatttatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatggtaacttgctgcatat 22501018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 22509034 - 22508952
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatat 213  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||| |||||||| |||||||| | |||||||||||||    
T  22509034 tatttatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatggtaacttgctgcatat 22508952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 5032127 - 5032220
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||||| | ||| ||||||| || |||| |||||||  |||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  5032127 ttgtgaaaaatgttgatatgaagttataatggttatattggatgattattgttgatgttgacttgctgcatattatttaatgttgttgccttgc 5032220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 233
Target Start/End: Original strand, 24781643 - 24781735
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttg 233  Q
    |||||||||  ||| ||||||| ||||||| |||||||  |||||||||| ||||||||||||||||||||||||||||||| || |||||||    
T  24781643 ttgtgaaagttgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatgatgctgccttg 24781735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 22501194 - 22501128
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatg 197  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||| |||||||| ||||||||    
T  22501194 tatttatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatg 22501128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 22509128 - 22509062
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatg 197  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||| |||||||| ||||||||    
T  22509128 tatttatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatg 22509062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 2524470 - 2524526
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgatt 187  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  2524470 tatttatatattgtgaaagacgttgatatcaaattgtaattgttacatatgatgatt 2524526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 7672299 - 7672374
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcata 212  Q
    |||||||||||||||||||||||| ||||||| ||||      |||||| ||||||||||||||||| ||||||| ||||||    
T  7672299 tatttatatattgtgaaagacgttgatatgaagttgt------tatataagatgattattattgatggtgacttgatgcata 7672374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 21368053 - 21367986
Alignment:
Q  196 tgttgacttgctgcatattatttaatggtgttgcct-tgcggttgtgacatattaatatcatgaagat 262  Q
    |||||||||| ||||| |||||||||| || ||||| |||||||||||  |||||||||||| |||||    
T  21368053 tgttgacttgttgcatgttatttaatgttgctgcctctgcggttgtgatttattaatatcattaagat 21367986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 59347 - 59449
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||||  |||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  59347 atttatatattgtgaaagatgttgatatgaagttgtaattgttatattggatgattattgttgatgttgacttgctgcatattttttaatggtgttgcct 59446  T
Q  232 tgc 234  Q
    |||    
T  59447 tgc 59449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 6800 - 6901
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| ||||| | |||||||  |||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||    
T  6800 tatttatatattgtgaaagacgttgatatggagttgtaatgattatatttgatgattattgttcatgttgacttgctgcatattatttaatggtgctgcc 6899  T
Q  231 tt 232  Q
    ||    
T  6900 tt 6901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 131 - 256
Target Start/End: Complemental strand, 85246 - 85121
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| ||||||| ||| ||| ||||||||||| ||||||||||||||||||| |||| || |||||||||||    
T  85246 tatttatatattgtgaaagatgttgatatgaagttgtaatagttgtatttgatgattattgttgatgttgacttgctgcaaattaattgatggtgttgcc 85147  T
Q  231 ttgcggttgtgacatattaatatcat 256  Q
    |||| | | |||  ||||||||||||    
T  85146 ttgctgatttgatgtattaatatcat 85121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 1677 - 1566
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||| |||||||  || |||| ||||| |    
T  1677 tatttatatattgtgaaagacgttgatatgaagttgtaattgttatataagatgattattattgatggtgacttgatgcatatgtttaaatgatgttgtc 1578  T
Q  231 ttgcggttgtga 242  Q
    |||  |||||||    
T  1577 ttgttgttgtga 1566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 3043 - 2912
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| ||| ||||||| ||||||| ||| ||| ||||||||||| |||||| |||||||||| | ||||| | |||||||||||    
T  3043 tatttatatattgtgaaagatgttgatatgaagttgtaatggttgtatttgatgattattgttgatgatgacttgctgtaaattatatgatggtgttgcc 2944  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| | |||||  |||||||||||| |||||    
T  2943 ttgctgatgtgatgtattaatatcattaagat 2912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 11006 - 10903
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||  |||||||||||||||  || |||| ||||| |    
T  11006 tatttatatattgtgaaagacgttgatatgaatttttaattgttatatatgatgattattattgattgtgacttgctgcatatgtttaaatgatgttgtc 10907  T
Q  231 ttgc 234  Q
    ||||    
T  10906 ttgc 10903  T

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Target: scaffold0371 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 3174 - 3073
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    |||||||||| |||||| | ||| ||||||| ||||||| |||||||  |||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  3174 atttatatatcgtgaaaaatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatgttgttgcct 3075  T
Q  232 tg 233  Q
    ||    
T  3074 tg 3073  T

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Target: scaffold0134 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 10029 - 10122
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||||||| ||| ||||||| ||||||| |||||||  |||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  10029 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatggtgctgccttgc 10122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 233
Target Start/End: Original strand, 9106 - 9197
Alignment:
Q  142 tgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttg 233  Q
    ||||||||| ||| ||||||| ||||||| |||||||  |||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  9106 tgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatggtgctgccttg 9197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 43907 - 44038
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||||| | | ||||||| ||||||| ||| ||| ||||||||||| |||||| |||||||||| | ||||||| ||| |||||||    
T  43907 tatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattattgttgatgatgacttgctgtaaattatttgatgatgttgcc 44006  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| | |||||  |||||||||||| |||||    
T  44007 ttgctgatgtgatgtattaatatcattaagat 44038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 242
Target Start/End: Original strand, 43765 - 43872
Alignment:
Q  135 tatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||| ||||||||  ||| ||||| | ||| || |||||||||||| |||||||||||||| | |||||||| ||||  || |||| ||||| |||||    
T  43765 tatataatgtgaaagttgttgatatggagttgcaaatgttatatatgaagattattattgatggttacttgctgtatatgtttaaatgatgttgtcttgc 43864  T
Q  235 ggttgtga 242  Q
     |||||||    
T  43865 tgttgtga 43872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 242
Target Start/End: Original strand, 47685 - 47792
Alignment:
Q  135 tatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||| ||||||||  ||| ||||| | ||| || |||||||||||| |||||||||||||| | ||||| || ||||  || |||| ||||| |||||    
T  47685 tatataatgtgaaagttgttgatatgtagttgcaaatgttatatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttgtcttgc 47784  T
Q  235 ggttgtga 242  Q
     |||||||    
T  47785 tgttgtga 47792  T

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Target: scaffold0071 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 14451 - 14340
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||| ||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||| |||||||  || |||| ||||| |    
T  14451 tattcatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattattattgatggtgacttgatgcatatgtttaaatgatgttgtc 14352  T
Q  231 ttgcggttgtga 242  Q
    |||| |||||||    
T  14351 ttgctgttgtga 14340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 5498 - 5600
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    ||||||||||||||||||  ||| ||||||| |||||||  ||||||  |||||||||| |||||||| ||||||||||||||||||||||||| |||||    
T  5498 atttatatattgtgaaaggtgttgatatgaagttgtaatgtttatattggatgattattgttgatgttaacttgctgcatattatttaatggtgctgcct 5597  T
Q  232 tgc 234  Q
    |||    
T  5598 tgc 5600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 911 - 813
Alignment:
Q  136 atatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    ||||||||||||||| ||| ||||||| ||||||| |||||||  |||||||||| ||||||||||||||||||||||||| |||| ||| ||||||||    
T  911 atatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatctaatcgtgctgccttgc 813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 8189 - 8282
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 234  Q
    |||||||||| ||| ||||||| ||||||| |||||||  ||||||| || |||||||||||||||||||||||||||||||||| ||||||||    
T  8189 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattgttgttgatgttgacttgctgcatattatttaatggtgctgccttgc 8282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 132 - 228
Target Start/End: Original strand, 2471 - 2567
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttg 228  Q
    ||||||||||||||||||| | | ||| ||| ||||||| |||||||  |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  2471 atttatatattgtgaaagatgctcataagaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatagtgttg 2567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 363003 - 362872
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||| ||||||| ||| ||||||| |||||||  || |||  |||||||||| ||||||||||||||||| | |||| || |||||||||||    
T  363003 tatttatatattttgaaagatgttgatatgaagttgtaatgattgtattagatgattattgttgatgttgacttgctgtaaattaattgatggtgttgcc 362904  T
Q  231 ttgcggttgtgacatattaatatcatgaagat 262  Q
    |||| | |||||  |||||||||||| |||||    
T  362903 ttgctgatgtgatgtattaatatcattaagat 362872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 77000 - 76898
Alignment:
Q  132 atttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcct 231  Q
    ||||||||||||||||||| ||  ||||||| ||||||| |||||||  |||||||||| ||||| |||| ||||| ||||||||||||||||| |||||    
T  77000 atttatatattgtgaaagatgtggatatgaagttgtaatggttatattggatgattattgttgattttgatttgctacatattatttaatggtgctgcct 76901  T
Q  232 tgc 234  Q
    |||    
T  76900 tgc 76898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 10992 - 11092
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||| ||||| ||| ||||||| ||||||| ||| |||  |||||||||| ||||||||||||||||| | ||||||| |||||||||||    
T  10992 tatttatatattgtaaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgcc 11091  T
Q  231 t 231  Q
    |    
T  11092 t 11092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 9561 - 9645
Alignment:
Q  141 ttgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtg 225  Q
    |||||||||| ||||||||||| ||||||| |||||||  ||||||||   ||||||||||||||||||||||||||||||||||    
T  9561 ttgtgaaagatgttaatatgaagttgtaatggttatattggatgattaccgttgatgttgacttgctgcatattatttaatggtg 9645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 262
Target Start/End: Original strand, 8410 - 8538
Alignment:
Q  134 ttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttg 233  Q
    |||||||||||||| || | | ||||||| |||||||  || ||| ||||||||||| |||||||||||||| |||| ||||||| ||| ||||||||||    
T  8410 ttatatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattattgttgatgttgacttgttgcaaattatttgatgttgttgccttg 8509  T
Q  234 cggttgtgacatattaatatcatgaagat 262  Q
    | | |||||  |||||||||||| |||||    
T  8510 ctgatgtgatgtattaatatcattaagat 8538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 36171 - 36258
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattattt 218  Q
    |||||||||||||||||||| ||| ||||||| ||||||| |||||||  |||||||||| ||||||||||||||||| | |||||||    
T  36171 tatttatatattgtgaaagatgttgatatgaagttgtaatggttatattagatgattattgttgatgttgacttgctgtaaattattt 36258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 256
Target Start/End: Original strand, 15468 - 15592
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||| | ||| ||||||| |||  ||||||||||  ||||||||| ||||||||||| |||||||||| ||||||||| || ||||    
T  15468 tatttatatattgtgaaaaatgttgatatgaagttgcgattgttatattcgatgattatcattgatgttgatttgctgcata-tatttaatgttgatgcc 15566  T
Q  231 ttgcggttgtgacatattaatatcat 256  Q
    |||  |||||||   |||||||||||    
T  15567 ttgttgttgtgatgcattaatatcat 15592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 256
Target Start/End: Original strand, 24526 - 24650
Alignment:
Q  131 tatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgcc 230  Q
    |||||||||||||||||| | ||| ||||||| |||  ||||||||||  ||||||||| ||||||||||| |||||||||| ||||||||| || ||||    
T  24526 tatttatatattgtgaaaaatgttgatatgaagttgcgattgttatattcgatgattatcattgatgttgatttgctgcata-tatttaatgttgatgcc 24624  T
Q  231 ttgcggttgtgacatattaatatcat 256  Q
    |||  |||||||   |||||||||||    
T  24625 ttgttgttgtgatgcattaatatcat 24650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 134 - 262
Target Start/End: Original strand, 24770 - 24898
Alignment:
Q  134 ttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttg 233  Q
    |||||||||||| | || | | ||||||| |||||||  || ||| ||||||||||| ||||||||||||||||| | ||||||| ||| ||||||||||    
T  24770 ttatatattgtggatgatgatgatatgaagttgtaatgattgtatttgatgattattgttgatgttgacttgctgtaaattatttgatgttgttgccttg 24869  T
Q  234 cggttgtgacatattaatatcatgaagat 262  Q
    | | |||||  |||||||||||| |||||    
T  24870 ctgatgtgatgtattaatatcattaagat 24898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 24676 - 24705
Alignment:
Q  164 ttgtaattgttatatatgatgattattatt 193  Q
    ||||||||||||||||||||||||||||||    
T  24676 ttgtaattgttatatatgatgattattatt 24705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 1959 - 1887
Alignment:
Q  170 ttgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcggttgtga 242  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||||  ||| ||||||||||| |||||||    
T  1959 ttgttgtatatgatgattattattgttgttgacttgctgcttattattagatgatgttgccttgctgttgtga 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 13523 - 13441
Alignment:
Q  180 tgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcggttgtgacatattaatatcatgaagat 262  Q
    ||||||||||| |||||||||||||| |||| ||||| | ||| ||||||||||| | | ||| ||||||||||||| |||||    
T  13523 tgatgattattgttgatgttgacttgttgcaaattatatgatgttgttgccttgctgatctgatatattaatatcattaagat 13441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 262
Target Start/End: Complemental strand, 414 - 309
Alignment:
Q  156 atatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcggttgtgacatattaatatca 255  Q
    ||||||| || ||||  |||||| ||||||||||| |||||||||||||| || | ||||||  ||||||||||| ||| | |||||  |||||||||||    
T  414 atatgaagttataatgattatatttgatgattattgttgatgttgacttgttgtaaattattcgatggtgttgcc-tgctgatgtgatgtattaatatca 316  T
Q  256 tgaagat 262  Q
    | |||||    
T  315 ttaagat 309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 262
Target Start/End: Original strand, 23486 - 23591
Alignment:
Q  156 atatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcggttgtgacatattaatatca 255  Q
    ||||||| || ||||  |||||| ||||||||||| |||||||||||||| || | ||||||  ||||||||||| ||| | |||||  |||||||||||    
T  23486 atatgaagttataatgattatatttgatgattattgttgatgttgacttgttgtaaattattcgatggtgttgcc-tgctgatgtgatgtattaatatca 23584  T
Q  256 tgaagat 262  Q
    | |||||    
T  23585 ttaagat 23591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 7811 - 7893
Alignment:
Q  180 tgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcggttgtgacatattaatatcatgaagat 262  Q
    ||||||||||| |||| ||||||||||||   ||||||| ||| ||||||||||| | |||||  |||||||||||| |||||    
T  7811 tgatgattattgttgacgttgacttgctgtgaattatttgatgttgttgccttgctgatgtgatgtattaatatcattaagat 7893  T

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Target: scaffold0142; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 7670 - 7699
Alignment:
Q  164 ttgtaattgttatatatgatgattattatt 193  Q
    ||||||||||||||||||||||||||||||    
T  7670 ttgtaattgttatatatgatgattattatt 7699  T

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Target: scaffold0192 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 9955 - 9926
Alignment:
Q  164 ttgtaattgttatatatgatgattattatt 193  Q
    ||||||||||||||||||||||||||||||    
T  9955 ttgtaattgttatatatgatgattattatt 9926  T

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Target: scaffold0261 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 18498 - 18546
Alignment:
Q  180 tgatgattattattgatgttgacttgctgcatattatttaatggtgttg 228  Q
    ||||||||||| |||||||||||||| |||| ||||||| ||| |||||    
T  18498 tgatgattattgttgatgttgacttgttgcaaattatttgatgttgttg 18546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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