View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17467_low_3 (Length: 237)
Name: NF17467_low_3
Description: NF17467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17467_low_3 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 51293412 - 51293632
Alignment:
| Q |
17 |
aaaatcgacatgaaacataagcattacctccacttacaaacctataatgtttagactttatctcattggaatcttaacaattcaaaccgccaaactatat |
116 |
Q |
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| T |
51293412 |
aaaatcgacatgaaacataagcattacctccacttacaaacctataatgtttagactttatctcattggaatcttaacaattcaaaccgccaaactatat |
51293511 |
T |
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| Q |
117 |
cttgttgaataagttacatatagtaatagtagtactaagttaattgatgaaaaattccatagaattattcacatttaatattacgacagaccttctaatc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51293512 |
cttgttgaataagttacatatagtaatagtagtactaagttaattgatgaaaaattccatagaattattcacatttaatattacgacagaccttctaatc |
51293611 |
T |
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| Q |
217 |
ttgttggtgaagtagttagtt |
237 |
Q |
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||||||||||||||||||||| |
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| T |
51293612 |
ttgttggtgaagtagttagtt |
51293632 |
T |
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