View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17468_low_16 (Length: 352)
Name: NF17468_low_16
Description: NF17468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17468_low_16 |
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Alignment Details
Target: chr5 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 43 - 343
Target Start/End: Original strand, 14089273 - 14089573
Alignment:
| Q |
43 |
aacaataatgaatcgtttcgtgggactccaacatatgagagaatgtttgtgccagtcatacacaatatagatcatatgtatttccttactctatagtcta |
142 |
Q |
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| T |
14089273 |
aacaataatgaatcgtttcgtgggactccaacatatgagagaatgtttgtgccagtcatacacaatatagatcatatgtatttccttactctatagtcta |
14089372 |
T |
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| Q |
143 |
taagcaagaatgtgcatttccttactctaccctcaattatagatcctatgtatgaattaagatctcaatacgttgcaagttgcaaccctcaattcttgat |
242 |
Q |
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| T |
14089373 |
taaccaagaatgtgcatttccttactctaccctcaattatagatcctatgtatgaattaagatctcaatgcgttgcaagttgcaaccctcaattcttgat |
14089472 |
T |
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| Q |
243 |
aatataaatgatgattcgtatactattacaatttgagagaggcttcttttggttcttctcgtgaagtaatggttcacagtctactatagcctttgcttct |
342 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
14089473 |
aatataaatgatgattcgtatactattacaatttgagagagggttcttttggttcttctcgtgaagtaatggttcacagtctactatagcctttgtttct |
14089572 |
T |
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| Q |
343 |
c |
343 |
Q |
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| T |
14089573 |
c |
14089573 |
T |
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