View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17468_low_33 (Length: 237)
Name: NF17468_low_33
Description: NF17468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17468_low_33 |
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Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 15 - 218
Target Start/End: Original strand, 29145866 - 29146070
Alignment:
| Q |
15 |
agagaaaattaactaaggtacataacataacaaaagctatagctagctaaaaactaaggtcacaaaacattgacaactatatatttt-ttcctccttggt |
113 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
29145866 |
agagaaaattaactaaggtacataacataataaaagctatagctagctaaaaactaaggtcacaaaacattgacaactatatatttttttcctccttggt |
29145965 |
T |
|
| Q |
114 |
acaatcaattagcactttcaacatgacgtataaacgcattttctaaatctggtgctttaaaaaactctcttacaacaccactacgttggtagttccactt |
213 |
Q |
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|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
29145966 |
acaatcaattagcactttcaacatgacgtataaacacattttctaaatctggtgctttaaaaaactctcttacaacaccactactttggtagttccactt |
29146065 |
T |
|
| Q |
214 |
caaag |
218 |
Q |
| |
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||||| |
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|
| T |
29146066 |
caaag |
29146070 |
T |
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