View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17468_low_40 (Length: 202)
Name: NF17468_low_40
Description: NF17468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17468_low_40 |
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Alignment Details
Target: chr6 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 11 - 191
Target Start/End: Original strand, 2566279 - 2566459
Alignment:
| Q |
11 |
gagacacagaccatttactcgaatgctataaccattatctaagctcttttgaacaaaaaaccaatatcaaagctgcttcaaaaagaaaatcgaataccaa |
110 |
Q |
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| T |
2566279 |
gagacacaaaccatttactcgaatgctataaccattatctaagctcttttgaacaaaaaaccaatatcaaagctgcttcaaaaagaaaatctaataccaa |
2566378 |
T |
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| Q |
111 |
cgcttcattgtnnnnnnntaattcaaaaactaagaaaattagttagaattctgctacaaatgattttcatacctcattctt |
191 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2566379 |
ggcttcattgtaaaaaaataattcaaaaactaagaaaattagttagaattctgctacaaatgattttcatacctcattctt |
2566459 |
T |
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