View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17469_low_19 (Length: 262)
Name: NF17469_low_19
Description: NF17469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17469_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 28 - 240
Target Start/End: Original strand, 15502986 - 15503198
Alignment:
| Q |
28 |
taccttatcatacaactgttcttaattaatctactccatgtcacatgctacttgcttaattcatcttgaagaagtcctaactcaccactaaatcaatcta |
127 |
Q |
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| T |
15502986 |
taccttatcatacaactgttcttaattaatctactccatgtcacatgctacttgcttaattcatcttgaagaagtcctaactcaccactacatcaatcta |
15503085 |
T |
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| Q |
128 |
taatttttatttctaaattgaagtaagcaataaagttaataactgttgggtctaactggttcgacccaactcgtccaattagtcacacaatcaacaaaag |
227 |
Q |
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| T |
15503086 |
taatttttatttctaaattgaagtaagcaataaagttaaaaactgttgggtctaactgactcgacctaattcgtccaattagtcacacaatcaacaaaag |
15503185 |
T |
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| Q |
228 |
actcattctttct |
240 |
Q |
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| T |
15503186 |
attcattctttct |
15503198 |
T |
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