View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1746_low_3 (Length: 488)

Name: NF1746_low_3
Description: NF1746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1746_low_3
NF1746_low_3
[»] chr1 (8 HSPs)
chr1 (14-477)||(19534387-19534837)
chr1 (14-181)||(51097503-51097671)
chr1 (14-68)||(36682271-36682325)
chr1 (14-67)||(49568894-49568947)
chr1 (84-197)||(28763052-28763166)
chr1 (14-68)||(36681516-36681570)
chr1 (14-44)||(50546086-50546116)
chr1 (14-46)||(19790830-19790862)
[»] chr3 (17 HSPs)
chr3 (49-477)||(36863909-36864324)
chr3 (14-100)||(1093161-1093247)
chr3 (14-131)||(49308118-49308237)
chr3 (28-161)||(37915410-37915545)
chr3 (14-119)||(18387635-18387741)
chr3 (14-68)||(25081551-25081605)
chr3 (24-131)||(53467231-53467340)
chr3 (14-66)||(55296507-55296559)
chr3 (14-68)||(46915784-46915838)
chr3 (14-75)||(49308833-49308895)
chr3 (14-68)||(55336827-55336881)
chr3 (14-68)||(50703731-50703786)
chr3 (14-68)||(55337592-55337647)
chr3 (14-68)||(25080804-25080858)
chr3 (14-75)||(36502383-36502443)
chr3 (14-46)||(34832028-34832060)
chr3 (14-46)||(50704375-50704407)
[»] chr4 (3 HSPs)
chr4 (14-181)||(11380883-11381052)
chr4 (14-161)||(51702655-51702804)
chr4 (15-144)||(49648163-49648294)
[»] chr5 (5 HSPs)
chr5 (28-181)||(29630393-29630547)
chr5 (14-131)||(41609495-41609614)
chr5 (53-153)||(8468905-8469006)
chr5 (14-131)||(14098368-14098487)
chr5 (14-68)||(12420906-12420960)
[»] chr2 (10 HSPs)
chr2 (39-161)||(28682429-28682552)
chr2 (27-100)||(45632395-45632468)
chr2 (14-68)||(44356803-44356857)
chr2 (62-131)||(30266359-30266429)
chr2 (14-144)||(42847920-42848052)
chr2 (14-69)||(13913464-13913519)
chr2 (14-100)||(42848629-42848716)
chr2 (14-60)||(1677558-1677604)
chr2 (14-68)||(44357599-44357653)
chr2 (15-68)||(18098492-18098545)
[»] chr7 (8 HSPs)
chr7 (12-68)||(41115495-41115551)
chr7 (24-100)||(42745632-42745709)
chr7 (14-127)||(32577318-32577433)
chr7 (14-68)||(7831621-7831676)
chr7 (14-68)||(18977830-18977884)
chr7 (14-64)||(44545272-44545322)
chr7 (28-131)||(9146066-9146171)
chr7 (14-66)||(27736858-27736910)
[»] chr6 (4 HSPs)
chr6 (14-68)||(22046416-22046470)
chr6 (14-68)||(22058824-22058878)
chr6 (14-66)||(25531585-25531637)
chr6 (14-68)||(22047212-22047266)
[»] scaffold0136 (1 HSPs)
scaffold0136 (14-100)||(23703-23790)
[»] chr8 (7 HSPs)
chr8 (14-131)||(20105014-20105133)
chr8 (14-68)||(23017254-23017309)
chr8 (14-69)||(36228495-36228550)
chr8 (14-68)||(39320921-39320975)
chr8 (14-68)||(41975599-41975653)
chr8 (62-100)||(44495100-44495138)
chr8 (16-68)||(44384732-44384784)


Alignment Details
Target: chr1 (Bit Score: 402; Significance: 0; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 14 - 477
Target Start/End: Complemental strand, 19534837 - 19534387
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagggattaatttagactgttggatctaaatcaacgg-tcaaattaaaa 112  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19534837 atatatatagagggcatatcaagtaagaggagtggatataatgagagatgagagggattaatttagactgttggatctaaatcaacggctcaaattaaaa 19534738  T
Q  113 tgctctttaaaaagggtcaagtagtgcaacctatacccttcctcttctcaactgcgacgttctctctctttcacgagtaatttctaccgtttcattcttg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19534737 tgctctttaaaaagggtcaagtagtgcaacctatacccttcctcttctcaactgcgacgttctctctctttcacgagtaatttctaccgtttcattcttg 19534638  T
Q  213 tatcttcttcttttcatcattctaatttgtttagattcaatagacaaatctgtcacaaattatttgtttagatgcatcaaaattatttcactatcccaaa 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19534637 tatcttcttcttttcatcattctaatttgtttagattcaatagacaaatctgtcacaaattatttgtttagatgcatcaaaattatttcactatcccaaa 19534538  T
Q  313 tctggcaatcgtgattgtgctttaaaattattggattaaaattattttgtgcttgctccttattcttccttgaagaccccttgtttgctcaactccaaat 412  Q
    ||||||||||||||||||||||||||||              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19534537 tctggcaatcgtgattgtgctttaaaat--------------tattttgtgcttgctccttattcttccttgaagaccccttgtttgctcaactccaaat 19534452  T
Q  413 tggattaaaattaaaagaatatacataaatgggtttgttttatcggtgttcattctctccatatt 477  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19534451 tggattaaaattaaaagaatatacataaatgggtttgttttatcagtgttcattctctccatatt 19534387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 51097503 - 51097671
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagggattaatttagactgttggatctaaatcaacgg-tcaaattaaaa 112  Q
    ||||||||| ||| |||||||||| |||||||| | ||||||||||||||||||| |||||||| ||| ||||||| |||||||| || | | |||||||    
T  51097503 atatatatagaggacatatcaagtgagaggagtagttataatgagagatgagaggaattaatttcgaccgttggatttaaatcaaaggctgagattaaaa 51097602  T
Q  113 tgctctttaaaaagggtcaagtagtgcaacctatacccttcctcttctcaactgcgacgttctctctct 181  Q
    |||||||||||| ||||||||||||||||||||||| |||| ||||||| ||| || | ||||||||||    
T  51097603 tgctctttaaaatgggtcaagtagtgcaacctatacacttcttcttctccacttcgtctttctctctct 51097671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 36682325 - 36682271
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    |||||||||||||||||||||| | |||||||| | |||| ||||||||||||||    
T  36682325 atatatatatagggcatatcaaatgagaggagttgttatagtgagagatgagagg 36682271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 49568894 - 49568947
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagag 67  Q
    ||||||||||||||||||||| || |||||||| | || |||||||||||||||    
T  49568894 atatatatatagggcatatcatgtgagaggagtagttaaaatgagagatgagag 49568947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 28763166 - 28763052
Alignment:
Q  84 ttggatctaaatcaacgg-tcaaattaaaatgctctttaaaaagggtcaagtagtgcaacctatacccttcctcttctcaactgcgacgttctctctctt 182  Q
    ||||||| |||||||||  ||| |||||| || ||||||||||||||||  || | || |||| ||| ||||||||||| ||| |  ||||||||||||     
T  28763166 ttggatcaaaatcaacgcctcagattaaattgttctttaaaaagggtcacatactacatcctacacctttcctcttctctacttcatcgttctctctctc 28763067  T
Q  183 tcacgagtaatttct 197  Q
    |||| ||| ||||||    
T  28763066 tcactagtgatttct 28763052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 36681516 - 36681570
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    ||||||||| ||| |||||||||| |||||||| | |||| ||||||||||||||    
T  36681516 atatatatagaggacatatcaagtgagaggagttgttatagtgagagatgagagg 36681570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 50546116 - 50546086
Alignment:
Q  14 atatatatatagggcatatcaagtaagagga 44  Q
    |||||||||||||||||||||||||||||||    
T  50546116 atatatatatagggcatatcaagtaagagga 50546086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 19790830 - 19790862
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagt 46  Q
    |||||||||||||||||||||||| ||||||||    
T  19790830 atatatatatagggcatatcaagtgagaggagt 19790862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 363; Significance: 0; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 49 - 477
Target Start/End: Original strand, 36863909 - 36864324
Alignment:
Q  49 atataatgagagatgagagggattaatttagactgttggatctaaatcaacgg-tcaaattaaaatgctctttaaaaagggtcaagtagtgcaacctata 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  36863909 atataatgagagatgagagggattaatttagactgttggatctaaatcaacggctcagattaaaatgctctttaaaaagggtcaagtagtgcaacctata 36864008  T
Q  148 cccttcctcttctcaactgcgacgttctctctctttcacgagtaatttctaccgtttcattcttgtatcttcttcttttcatcattctaatttgtttaga 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36864009 cccttcctcttctcaactgcgacgttctctctctttcacgagtaatttctaccgtttcattcttgtatcttcttcttttcatcattctaatttgtttata 36864108  T
Q  248 ttcaatagacaaatctgtcacaaattatttgtttagatgcatcaaaattatttcactatcccaaatctggcaatcgtgattgtgctttaaaattattgga 347  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  
T  36864109 ttcaatagacaaatctgtcacaaattatttgtttagatgcatcaaaattatttcactatcccaaatctggcaatcgtgattgtgct-------------- 36864194  T
Q  348 ttaaaattattttgtgcttgctccttattcttccttgaagaccccttgtttgctcaactccaaattggattaaaattaaaagaatatacataaatgggtt 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36864195 ttaaaattattttgtgcttgctccttattcttccttgaagaccccttgtttgctcaactccaaattggattaaaattaaaagaatatacataaatgggtt 36864294  T
Q  448 tgttttatcggtgttcattctctccatatt 477  Q
    ||||||||| ||||||||||||||||||||    
T  36864295 tgttttatcagtgttcattctctccatatt 36864324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 1093161 - 1093247
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagggattaatttagactgttggatctaaatcaacg 100  Q
    |||||||||||||||||||||||| |||||||| | || |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  1093161 atatatatatagggcatatcaagtgagaggagtagttacaatgagagatgagaggaattaatttagaccgttggatctaaatcaacg 1093247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 49308118 - 49308237
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgaga-gatgagagggattaatttagactgttggatctaaatcaacg-gtcaaattaaa 111  Q
    ||||||||| |||||||||||||| |||||||| | |||||||||| ||||||||| |||||||| ||   ||||||| |||||||||  ||| ||| ||    
T  49308118 atatatatagagggcatatcaagtgagaggagtagttataatgagaggatgagaggaattaatttggatcattggatcaaaatcaacgcttcagatttaa 49308217  T
Q  112 atgctctttaaaaagggtca 131  Q
     |||||||||||||||||||    
T  49308218 ttgctctttaaaaagggtca 49308237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 37915410 - 37915545
Alignment:
Q  28 catatcaagtaagaggagtggatataatgagag-atgagagggattaatttagactgttggatctaaatcaacggt-caaattaaaatgctctttaaaaa 125  Q
    |||||||||| |||||||| | ||||||||||| |||||||| |||||| |||||  ||||||| ||||||||| | || ||| || || ||||||||||    
T  37915410 catatcaagtgagaggagtagttataatgagaggatgagaggaattaatctagaccattggatcaaaatcaacgcttcagatttaattgttctttaaaaa 37915509  T
Q  126 gggtcaagtagtgcaacctatacccttcctcttctc 161  Q
    |||||| | | | ||||||||||| ||| |||||||    
T  37915510 gggtcatgcactacaacctatacctttcatcttctc 37915545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 18387635 - 18387741
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagggattaatttagactgttggatctaaatcaacgg-tcaaattaaaa 112  Q
    |||||||||||||||||||||| | |||||||| | || |||||||||| ||||| |||| ||| ||  ||| |||||||||||| || | | |||||||    
T  18387635 atatatatatagggcatatcaaatgagaggagtagttacaatgagagataagaggaattattttggatggttagatctaaatcaatggctaagattaaaa 18387734  T
Q  113 tgctctt 119  Q
    |||||||    
T  18387735 tgctctt 18387741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 25081605 - 25081551
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    |||||||||||||||||||||||| |||||||| | |||| ||||||||||||||    
T  25081605 atatatatatagggcatatcaagtgagaggagttgttatagtgagagatgagagg 25081551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 53467340 - 53467231
Alignment:
Q  24 agggcatatcaagtaagaggagtggatataatgagag-atgagagggattaatttagactgttggatctaaatcaacggt-caaattaaaatgctcttta 121  Q
    ||||||||||||||  ||||||| | ||||||||||| |||||||| |||||| | ||   ||||||| ||||||||| | |||||| || |||||||||    
T  53467340 agggcatatcaagtgggaggagtagttataatgagaggatgagaggaattaatctggatcattggatcaaaatcaacgcttcaaatttaattgctcttta 53467241  T
Q  122 aaaagggtca 131  Q
    ||||||||||    
T  53467240 aaaagggtca 53467231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 55296507 - 55296559
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgaga 66  Q
    |||||||||||||||||||||| | |||||||||| ||| |||||||||||||    
T  55296507 atatatatatagggcatatcaaatgagaggagtggttattatgagagatgaga 55296559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 46915784 - 46915838
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    ||||||||||| |||||||||||| |||||||| | || ||||||||||||||||    
T  46915784 atatatatatatggcatatcaagtgagaggagttgttaaaatgagagatgagagg 46915838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 49308895 - 49308833
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgaga-gatgagagggattaat 75  Q
    ||||||||| |||||||||||||| |||||||| | |||||||||| ||||||||| ||||||    
T  49308895 atatatatagagggcatatcaagtgagaggagtagttataatgagaggatgagaggaattaat 49308833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 55336827 - 55336881
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||| |||||    
T  55336827 atatatatatagggcatatcaagtgagaggagtaattataatgagagataagagg 55336881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 50703731 - 50703786
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgaga-gatgagagg 68  Q
    |||||||||||||||||||||||| |||||||| | || ||||||| |||||||||    
T  50703731 atatatatatagggcatatcaagtgagaggagtagttaaaatgagaggatgagagg 50703786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 55337647 - 55337592
Alignment:
Q  14 atatatatat-agggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    |||||||||| |||||||||||||| ||||||||   |||||||||||||||||||    
T  55337647 atatatatatgagggcatatcaagtgagaggagtaattataatgagagatgagagg 55337592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 25080804 - 25080858
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    ||||| ||| |||||||||||||| |||||||| | |||| ||||||||||||||    
T  25080804 atatacatagagggcatatcaagtgagaggagttgttatagtgagagatgagagg 25080858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 36502443 - 36502383
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagggattaat 75  Q
    |||||||||||||||||||||||| ||||||||   |||  ||||||||||||||| |||||    
T  36502443 atatatatatagggcatatcaagtgagaggagt-tttattgtgagagatgagagggtttaat 36502383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 34832028 - 34832060
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagt 46  Q
    |||||||||||||||||||||||| ||||||||    
T  34832028 atatatatatagggcatatcaagtgagaggagt 34832060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 50704407 - 50704375
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagt 46  Q
    |||||||||||||||||||||||| ||||||||    
T  50704407 atatatatatagggcatatcaagtgagaggagt 50704375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 11381052 - 11380883
Alignment:
Q  14 atatatatat-agggcatatcaagtaagaggagtggatataatgagagatgagagggattaatttagactgttggatctaaatcaacgg-tcaaattaaa 111  Q
    |||||||||| ||| |||||||||| |||||||| | ||||||||||||||||||| |||||||| ||| ||||||| |||||||| || | | ||||||    
T  11381052 atatatatatgaggacatatcaagtgagaggagtagttataatgagagatgagaggaattaatttcgaccgttggatttaaatcaaaggctgagattaaa 11380953  T
Q  112 atgctctttaaaaagggtcaagtagtgcaacctatacccttcctcttctcaactgcgacgttctctctct 181  Q
    ||||||||||||| ||||||||||||||||||||||| |||| ||||||| ||| || | ||||||||||    
T  11380952 atgctctttaaaatgggtcaagtagtgcaacctatacacttcttcttctccacttcgtctttctctctct 11380883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 51702655 - 51702804
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgaga-gatgagagggattaatttagactgttggatctaaatcaacg-gtcaaattaaa 111  Q
    |||||||||||||||||||||||| |||||||| | ||| |||||| ||||||||| |||||| | ||   ||||||| |||||||||  ||| ||| ||    
T  51702655 atatatatatagggcatatcaagtgagaggagtagttatgatgagaggatgagaggaattaatctggatcattggatcaaaatcaacgtttcagatttaa 51702754  T
Q  112 atgctctttaaaaagggtcaagtagtgcaacctatacccttcctcttctc 161  Q
     ||||||||||||||||||| | | | |||||| |||| ||| |||||||    
T  51702755 ttgctctttaaaaagggtcatgcactacaacctctacctttcatcttctc 51702804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 49648294 - 49648163
Alignment:
Q  15 tatatatatagggcatatcaagtaagaggagtggatataatgaga-gatgagagggattaatttagactgttggatctaaatcaacg-gtcaaattaaaa 112  Q
    |||||||||| |||||||||||| |||||||| | |||||||||| | ||||||| |||||||| |||  ||  |||||||||||||  ||| ||| ||     
T  49648294 tatatatataaggcatatcaagtgagaggagtagttataatgagagggtgagaggaattaatttggaccatttaatctaaatcaacgcttcagatttaat 49648195  T
Q  113 tgctctttaaaaagggtcaagtagtgcaacct 144  Q
    ||| ||||||||||||||| ||| | ||||||    
T  49648194 tgcactttaaaaagggtcatgtacttcaacct 49648163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 29630393 - 29630547
Alignment:
Q  28 catatcaagtaagaggagtggatataatgagagatgagagggattaatttagactgttggatctaaatcaacgg-tcaaattaaaatgctctttaaaaag 126  Q
    |||||||||| |||||||| | ||||||||||||||||||| |||||||||||| |||  || |||||||| || | | ||||||||||||||||||| |    
T  29630393 catatcaagtgagaggagtagttataatgagagatgagaggaattaatttagaccgttaaatttaaatcaaaggctgagattaaaatgctctttaaaatg 29630492  T
Q  127 ggtcaagtagtgcaacctatacccttcctcttctcaactgcgacgttctctctct 181  Q
    |||||||||||||||||||||| |||| ||||||| ||| || | ||||||||||    
T  29630493 ggtcaagtagtgcaacctatacacttcttcttctccacttcgtctttctctctct 29630547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 41609495 - 41609614
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgaga-gatgagagggattaatttagactgttggatctaaatcaacg-gtcaaattaaa 111  Q
    |||||||||||||||||||||||| |||||||| | |||||||||| ||||||||| ||||||||  ||  ||||||| |||||||||  ||| ||| ||    
T  41609495 atatatatatagggcatatcaagtgagaggagtagttataatgagaggatgagaggaattaatttgaaccattggatcaaaatcaacgcatcagatttaa 41609594  T
Q  112 atgctctttaaaaagggtca 131  Q
     |||||||||||||||||||    
T  41609595 ttgctctttaaaaagggtca 41609614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 153
Target Start/End: Original strand, 8468905 - 8469006
Alignment:
Q  53 aatgagagatgagagggattaatttagactgttggatctaaatcaacggtcaa-attaaaatgctctttaaaaagggtcaagtagtgcaacctataccct 151  Q
    |||||||||||||||| |||| ||| ||| ||| |||||||||||| ||  || |||||||||||||| |||||||||||| || |||||| |||| |||    
T  8468905 aatgagagatgagaggaattattttggacggttagatctaaatcaatggctaagattaaaatgctcttcaaaaagggtcaaatactgcaacatatatcct 8469004  T
Q  152 tc 153  Q
    ||    
T  8469005 tc 8469006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 14098487 - 14098368
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgaga-gatgagagggattaatttagactgttggatctaaatcaacg-gtcaaattaaa 111  Q
    ||||||||||| | |||||||||| |||||||| | || ||||||| ||||| ||| |||||||| |||  ||||| | |||||||||  ||| ||| ||    
T  14098487 atatatatatatgacatatcaagtgagaggagtagttacaatgagaggatgacaggaattaatttggaccattggaacaaaatcaacgcttcagatttaa 14098388  T
Q  112 atgctctttaaaaagggtca 131  Q
     |||||||||||||||||||    
T  14098387 ttgctctttaaaaagggtca 14098368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 12420906 - 12420960
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    ||||||||||| ||||| |||| | |||||||||| ||| |||||||||||||||    
T  12420906 atatatatatatggcatttcaaatgagaggagtggttattatgagagatgagagg 12420960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 161
Target Start/End: Original strand, 28682429 - 28682552
Alignment:
Q  39 agaggagtggatataatgagagatgagagggattaatttagactgttggatctaaatcaacg-gtcaaattaaaatgctctttaaaaagggtcaagtagt 137  Q
    |||||||| | |||||||| |||||||| | |||||||||| |||||||||||||||||| |  ||  | |||| ||||||||||||| ||||||||| |    
T  28682429 agaggagtagttataatgaaagatgagatgaattaatttagtctgttggatctaaatcaatgcctcggaataaattgctctttaaaaatggtcaagtact 28682528  T
Q  138 gcaacctatacccttcctcttctc 161  Q
    ||||| ||||||  ||||||||||    
T  28682529 gcaacatatacctctcctcttctc 28682552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 45632468 - 45632395
Alignment:
Q  27 gcatatcaagtaagaggagtggatataatgagagatgagagggattaatttagactgttggatctaaatcaacg 100  Q
    ||||||||||| |||||||| | || |||||||||||||||| ||||||||| || ||||||||||||||||||    
T  45632468 gcatatcaagtgagaggagtagttacaatgagagatgagaggaattaatttaaaccgttggatctaaatcaacg 45632395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 44356803 - 44356857
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    |||||||||||||||||||||||| |||||||| | || ||||||||||||||||    
T  44356803 atatatatatagggcatatcaagtgagaggagttgttaaaatgagagatgagagg 44356857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 30266359 - 30266429
Alignment:
Q  62 tgagagggattaatttagactgttggatctaaatcaac-ggtcaaattaaaatgctctttaaaaagggtca 131  Q
    ||||||| |||||||||||| |||||||||||||||||   ||| ||| || |||||||||||||||||||    
T  30266359 tgagaggaattaatttagaccgttggatctaaatcaacacttcagatttaattgctctttaaaaagggtca 30266429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 42847920 - 42848052
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgaga-gatgagagggattaatttagactgttggatctaaatcaacg-gtcaaattaaa 111  Q
    |||||||||||  ||||||||||| |||||| | | |||||||||| | ||||||| |||| ||| |||  |||||||||||||||||  ||| ||| ||    
T  42847920 atatatatatatagcatatcaagtgagaggaatagttataatgagagggtgagaggaattagtttggaccattggatctaaatcaacgcttcagatttaa 42848019  T
Q  112 atgctctttaaaaagggtcaagtagtgcaacct 144  Q
     ||| ||||||||||| ||| ||| | ||||||    
T  42848020 ttgcactttaaaaaggatcatgtacttcaacct 42848052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 13913519 - 13913464
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagaggg 69  Q
    |||||||||||||||||||||||| ||||||     ||||||||||||||||||||    
T  13913519 atatatatatagggcatatcaagtgagaggacatcttataatgagagatgagaggg 13913464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 42848716 - 42848629
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgaga-gatgagagggattaatttagactgttggatctaaatcaacg 100  Q
    ||||||||||| |||||||||| | |||||||| | ||||| |||| | ||||| | |||||||| ||| |||| |||||||||||||    
T  42848716 atatatatatatggcatatcaaattagaggagtagttataaggagagggtgagaagaattaatttggaccgttgaatctaaatcaacg 42848629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 1677558 - 1677604
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagag 60  Q
    |||||||||||||||||||||||| |||||||| | || ||||||||    
T  1677558 atatatatatagggcatatcaagtgagaggagtagttaaaatgagag 1677604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 44357653 - 44357599
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    ||||||||||||| |||||||||| |||||| | | || ||||||||||||||||    
T  44357653 atatatatataggacatatcaagtgagaggaattgttaaaatgagagatgagagg 44357599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 18098545 - 18098492
Alignment:
Q  15 tatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    |||||||||| ||||| |||| | |||||||||| ||| |||||||||||||||    
T  18098545 tatatatatatggcatttcaaatgagaggagtggttattatgagagatgagagg 18098492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 41115551 - 41115495
Alignment:
Q  12 caatatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    |||||||||||||||||||||||||| |||||||| | || ||||||||||||||||    
T  41115551 caatatatatatagggcatatcaagtgagaggagttgttaaaatgagagatgagagg 41115495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 42745632 - 42745709
Alignment:
Q  24 agggcatatcaagtaagaggagtggatataatgagag-atgagagggattaatttagactgttggatctaaatcaacg 100  Q
    |||||||||||||| |||| ||| | |||||| |||| |||||||| |||||||| ||| ||||||||||||||||||    
T  42745632 agggcatatcaagtgagagtagtagttataataagaggatgagaggaattaatttggaccgttggatctaaatcaacg 42745709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 32577433 - 32577318
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgaga-gatgagagggattaatttagactgttggatctaaatcaacg-gtcaaattaaa 111  Q
    |||||||||||| ||||||||||| |||||||| | || ||||||| ||||||||| |||||| |  ||  ||||||| |||||||||  ||| ||| ||    
T  32577433 atatatatatagtgcatatcaagtgagaggagttgttagaatgagaggatgagaggaattaatctgaaccattggatcaaaatcaacgcttcagatttaa 32577334  T
Q  112 atgctctttaaaaagg 127  Q
     |||||||||||||||    
T  32577333 ttgctctttaaaaagg 32577318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 7831621 - 7831676
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgaga-gatgagagg 68  Q
    ||||||||||| |||||||||||| |||||||| | |||||||||| |||||||||    
T  7831621 atatatatatatggcatatcaagtgagaggagtagttataatgagaggatgagagg 7831676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 18977830 - 18977884
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    ||||||||||| | |||||||||| |||||||| | || ||||||||||||||||    
T  18977830 atatatatatatgacatatcaagttagaggagttgttaaaatgagagatgagagg 18977884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 44545322 - 44545272
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatga 64  Q
    |||||||||||||||||||||||| ||| |||| | || ||||||||||||    
T  44545322 atatatatatagggcatatcaagtgagatgagttgttaaaatgagagatga 44545272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 9146066 - 9146171
Alignment:
Q  28 catatcaagtaagaggagtggatataatgagag-atgagagggattaatttagactgttggatctaaatcaacggt-caaattaaaatgctctttaaaaa 125  Q
    |||||||||| ||||| ||   ||||||||||| |||||||| |||||||| |||  ||||||| ||||||||| | || ||| || || ||||||||||    
T  9146066 catatcaagtgagaggtgtaattataatgagaggatgagaggaattaatttggacatttggatcaaaatcaacgcttcagatttaattgttctttaaaaa 9146165  T
Q  126 gggtca 131  Q
    ||||||    
T  9146166 gggtca 9146171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 27736858 - 27736910
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgaga 66  Q
    ||||||||||||||||| |||| | |||| ||||| ||| |||||||||||||    
T  27736858 atatatatatagggcatttcaaatgagagaagtggttattatgagagatgaga 27736910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 22046416 - 22046470
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    |||||||||||||||||||||||| |||||||| | || ||||||||||||||||    
T  22046416 atatatatatagggcatatcaagtgagaggagttgttaaaatgagagatgagagg 22046470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 22058824 - 22058878
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    |||||||||||||||||||||||| |||||||| | || ||||||||||||||||    
T  22058824 atatatatatagggcatatcaagtgagaggagttgttaaaatgagagatgagagg 22058878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 25531637 - 25531585
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgaga 66  Q
    ||||||||||||||||| |||| | |||||||||| ||| |||||||||||||    
T  25531637 atatatatatagggcatttcaaatgagaggagtggttattatgagagatgaga 25531585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 22047266 - 22047212
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    ||||||||||||| |||||||||| |||||| | | || ||||||||||||||||    
T  22047266 atatatatataggacatatcaagtgagaggaattgttaaaatgagagatgagagg 22047212  T

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Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 23790 - 23703
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgaga-gatgagagggattaatttagactgttggatctaaatcaacg 100  Q
    ||||||||||||| |||||||||| |||| ||| | |||||||||| ||||||||| |||||| ||||   ||||||| |||||||||    
T  23790 atatatatataggacatatcaagtgagagtagtagttataatgagaggatgagaggaattaatatagatcattggatcaaaatcaacg 23703  T

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Target: chr8 (Bit Score: 32; Significance: 0.00000001; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 20105133 - 20105014
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgaga-gatgagagggattaatttagactgttggatctaaatcaacg-gtcaaattaaa 111  Q
    ||||||||| |||||||||||||| |||||| | | |||||||||| ||||||||| |||||| |  |   ||||||| |||||||||  ||| ||| ||    
T  20105133 atatatatagagggcatatcaagtgagaggactagttataatgagaggatgagaggaattaatctgaatcattggatcaaaatcaacgcttcagatttaa 20105034  T
Q  112 atgctctttaaaaagggtca 131  Q
     || ||||||||||||||||    
T  20105033 ttggtctttaaaaagggtca 20105014  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 23017254 - 23017309
Alignment:
Q  14 atatatatatagggcatatc-aagtaagaggagtggatataatgagagatgagagg 68  Q
    |||||||||||||||||||| |||| |||||||| | |||| ||||||||||||||    
T  23017254 atatatatatagggcatatcaaagtgagaggagttgttatagtgagagatgagagg 23017309  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 36228495 - 36228550
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagaggg 69  Q
    |||||||||||||||||||||||||||||||     || |||||||||||||||||    
T  36228495 atatatatatagggcatatcaagtaagaggaccttttaaaatgagagatgagaggg 36228550  T

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Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 39320921 - 39320975
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    |||||||||||||||||||||||| ||| || | | |||| ||||||||||||||    
T  39320921 atatatatatagggcatatcaagtgagatgacttgttatagtgagagatgagagg 39320975  T

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Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 41975653 - 41975599
Alignment:
Q  14 atatatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    ||||||||||||||||| |||| | ||| |||||| ||| |||||||||||||||    
T  41975653 atatatatatagggcatttcaaatgagatgagtggttattatgagagatgagagg 41975599  T

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Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 44495138 - 44495100
Alignment:
Q  62 tgagagggattaatttagactgttggatctaaatcaacg 100  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  44495138 tgagaggaattaatttagaccgttggatctaaatcaacg 44495100  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 44384732 - 44384784
Alignment:
Q  16 atatatatagggcatatcaagtaagaggagtggatataatgagagatgagagg 68  Q
    ||||||||||||||| |||| | |||| ||||| ||| |||||||||||||||    
T  44384732 atatatatagggcatttcaaatgagagaagtggttattatgagagatgagagg 44384784  T

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