View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1746_low_5 (Length: 363)
Name: NF1746_low_5
Description: NF1746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1746_low_5 |
 |  |
|
| [»] scaffold0061 (1 HSPs) |
 |  |  |
|
| [»] scaffold0017 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 318; Significance: 1e-179; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 16 - 353
Target Start/End: Original strand, 35899968 - 35900305
Alignment:
| Q |
16 |
gggacaacttccttcctcattaaagaattgctcaaacttggctttattggatcttggagaaaatatgtttcatggtccattacctttatggattggagac |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
35899968 |
gggacaacttccttcctcattaaagaattgctcaaacttggctttattggatcttggagaaaatatatttcatggtccattacctttatggattggagat |
35900067 |
T |
 |
| Q |
116 |
agtttacaccaattaataatcttaagtcttcggttcaataaattcaatggaagtctaccttcaaatctctgttatttgagaaatcttcatgtcttagatt |
215 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35900068 |
agtttgcaccaattaataatcttaagccttcggttcaataaattcaatggaagtctaccttcaaatctctgttatttgagaaatcttcatgtcttagatt |
35900167 |
T |
 |
| Q |
216 |
tgtcacttaatagcttatcaggaggaatcccaacttgtgtaaagaatcttactttaatggctcaggagttcattaattcaacttcatcatttctacctgt |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35900168 |
tgtcacttaatagcttatcaggaggaatcccaacttgtgtaaagaatcttactttaatggctcaggagttcattaattcaacttcatcatttctacctgt |
35900267 |
T |
 |
| Q |
316 |
ggtttcactcaacaactggtcttttaatttaccctatg |
353 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
35900268 |
gatttcactcaacaactggtcttttaatttaccctatg |
35900305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 17 - 282
Target Start/End: Original strand, 44145856 - 44146127
Alignment:
| Q |
17 |
ggacaacttccttcctcattaaagaattgctcaaac---ttggctttattggatcttggagaaaatatgtttcatggtccattaccttt---atggattg |
110 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
44145856 |
ggacaacttccttcttcattgaagaattgctcaaacaagttggctttgttggatcttggagaaaatatgtttcatggtctgttaccttcttcatggattg |
44145955 |
T |
 |
| Q |
111 |
gagacagtttacaccaattaataatcttaagtcttcggttcaataaattcaatggaagtctaccttcaaatctctgttatttgagaaat-cttcatgtct |
209 |
Q |
| |
|
|||| ||||||||||||||| |||||||||| || | |||||||| ||||||||||||||||||||||||||||| ||||||| |||| || || |||| |
|
|
| T |
44145956 |
gagatagtttacaccaattagtaatcttaagcctccaattcaataacttcaatggaagtctaccttcaaatctctg-tatttgaaaaatcctccaagtct |
44146054 |
T |
 |
| Q |
210 |
tagatttgtcacttaatagcttatcaggaggaatcccaacttgtgtaaagaatcttactttaatggctcagga |
282 |
Q |
| |
|
| ||| ||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||||| |||||| |
|
|
| T |
44146055 |
tggatctgtcactaaatagcttatcaggaggaatcccaacttgtgtaaataattttacttcaatggatcagga |
44146127 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 17 - 268
Target Start/End: Complemental strand, 17810912 - 17810658
Alignment:
| Q |
17 |
ggacaacttccttcctcattaaagaattgctcaaact---tggctttattggatcttggagaaaatatgtttcatggtccattacctttatggattggag |
113 |
Q |
| |
|
||||||||| |||||||||| ||||| ||||| || ||||||| ||||| || |||||||||| |||||||||||||||||||| |||| |||||| |
|
|
| T |
17810912 |
ggacaacttacttcctcattgaagaaatgctccgacaagctggctttgttggacctcggagaaaataagtttcatggtccattaccttcatgggttggag |
17810813 |
T |
 |
| Q |
114 |
acagtttacaccaattaataatcttaagtcttcggttcaataaattcaatggaagtctaccttcaaatctctgttatttgagaaatcttcatgtcttaga |
213 |
Q |
| |
|
||| ||||||||||||| |||||||||||||||| |||||||| || | ||||||| ||||||||||| | |||||||||||||| |||| || || || |
|
|
| T |
17810812 |
acaatttacaccaattagtaatcttaagtcttcgattcaataatttaagtggaagtataccttcaaatgtatgttatttgagaaaacttcgagtattgga |
17810713 |
T |
 |
| Q |
214 |
tttgtcacttaatagcttatcaggaggaatcccaacttgtgtaaagaatcttact |
268 |
Q |
| |
|
| ||||||| |||| ||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
17810712 |
tctgtcactaaataacttatcaggaggaatcccaacttgtgtaatgaattttact |
17810658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 17 - 296
Target Start/End: Original strand, 44613592 - 44613874
Alignment:
| Q |
17 |
ggacaacttccttcctcattaaagaattgctcaaac---ttggctttattggatcttggagaaaatatgtttcatggtccattacctttatggattggag |
113 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
44613592 |
ggacaacttccttcctctttgaagaattgctcaaacaagttggctttgttggatcttggagaaaataagtttcatggtccattaccttcatggattggag |
44613691 |
T |
 |
| Q |
114 |
acagtttacaccaattaataatcttaagtcttcggttcaataaattcaatggaagtctaccttcaaatctctgttatttgagaaatcttcatgtcttaga |
213 |
Q |
| |
|
| || ||||| | ||| ||||||||| ||||| | |||||| ||| |||||||| ||||||||||||||||||| |||| ||| ||||| ||||| || |
|
|
| T |
44613692 |
atagcttacaaaatttagaaatcttaagccttcgatccaataacttctatggaagtttaccttcaaatctctgttacttgacaaaacttcaagtcttgga |
44613791 |
T |
 |
| Q |
214 |
tttgtcacttaatagcttatcaggaggaatcccaacttgtgtaaagaatcttactttaatggctcaggagttcattaattcaa |
296 |
Q |
| |
|
||||||||| || | | |||||||| |||||||||||||| |||| ||| |||| | |||| || |||| || |||| ||||| |
|
|
| T |
44613792 |
tttgtcactgaacaacatatcaggaagaatcccaacttgtataaacaattttacatcaatgtcttaggacttgattagttcaa |
44613874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 267
Target Start/End: Complemental strand, 44794746 - 44794493
Alignment:
| Q |
17 |
ggacaacttccttcctcattaaagaattgctcaaac---ttggctttattggatcttggagaaaatatgtttcatggtccattacctttatggattggag |
113 |
Q |
| |
|
||||||||||||||||| || ||||||| ||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
44794746 |
ggacaacttccttcctctttgaagaatttctcaaacaagttggctttgttggatcttggagaaaataagtttcatggtccattaccttcatggattggag |
44794647 |
T |
 |
| Q |
114 |
acagtttacaccaattaataatcttaagtcttcggttcaataaattcaatggaagtctaccttcaaatctctgttatttgagaaatcttcatgtcttaga |
213 |
Q |
| |
|
| || ||||| | ||| ||||||||| ||||| | |||||| ||| |||||||| ||||||||||||||||||| |||| ||| ||||| ||||| || |
|
|
| T |
44794646 |
atagcttacaaaatttagaaatcttaagccttcgatccaataacttctatggaagtttaccttcaaatctctgttacttgacaaaacttcaagtcttgga |
44794547 |
T |
 |
| Q |
214 |
tttgtcacttaatagcttatcaggaggaatcccaacttgtgtaaagaatcttac |
267 |
Q |
| |
|
||||||||| || | | |||||||| |||||||||||||| |||| ||| |||| |
|
|
| T |
44794546 |
tttgtcactgaacaacatatcaggaagaatcccaacttgtataaacaattttac |
44794493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 17 - 241
Target Start/End: Complemental strand, 11543687 - 11543460
Alignment:
| Q |
17 |
ggacaacttccttcctcattaaagaattgctcaaac---ttggctttattggatcttggagaaaatatgtttcatggtccattacctttatggattggag |
113 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||| || |||||| | ||||| ||||||||||||| |||||||||||| ||||||| ||||||||||| |
|
|
| T |
11543687 |
ggacaacttccttcttcattgaagaattgctcagacaagttggctatcttggaccttggagaaaatacgtttcatggtccgttaccttcatggattggag |
11543588 |
T |
 |
| Q |
114 |
acagtttacaccaattaataatcttaagtcttcggttcaataaattcaatggaagtctaccttcaaatctctgttatttgagaaatcttcatgtcttaga |
213 |
Q |
| |
|
||||||||| ||| || |||||||||| ||| | |||||| |||| ||||||| |||||||||||||||||||||| ||||| || ||| ||||||| |
|
|
| T |
11543587 |
gcagtttacaacaactagtaatcttaagcctttgagccaataacttcagtggaagtataccttcaaatctctgttatttaagaaaactgcatatcttaga |
11543488 |
T |
 |
| Q |
214 |
tttgtcacttaatagcttatcaggagga |
241 |
Q |
| |
|
| ||||||| |||||||||||||||||| |
|
|
| T |
11543487 |
tatgtcactaaatagcttatcaggagga |
11543460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 28386 - 28121
Alignment:
| Q |
20 |
caacttccttcctcattaaagaattgctcaaac---ttggctttattggatcttggagaaaatatgtttcatggtccattacctttatggattggagaca |
116 |
Q |
| |
|
|||||||||||||| || ||||||| ||||||| |||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
28386 |
caacttccttcctctttgaagaatttctcaaacaagttggctatgttggatcttggagaaaatatgtttcaaggtccattaccttcatggattggagaca |
28287 |
T |
 |
| Q |
117 |
gtttacaccaattaataatcttaagtcttcggttcaataaattcaatggaagtctaccttcaaatctctgttatttgagaaatcttcatgtcttagattt |
216 |
Q |
| |
|
|||| |||||| |||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||| | |
|
|
| T |
28286 |
acttacgacaattagtaatcttaagccttcgattcaataacttcaatggaagtctaccttcaaatctatgttatttgacaaaacttcatgtcttagatat |
28187 |
T |
 |
| Q |
217 |
gtcacttaatagcttatcaggaggaatcccaacttgtgtaaagaatcttactttaatggctcagga |
282 |
Q |
| |
|
|||||| |||| ||||||||||||||||| ||||||||||| ||| | |||| |||||||||||| |
|
|
| T |
28186 |
gtcactaaataatttatcaggaggaatccccacttgtgtaaacaatttaacttcaatggctcagga |
28121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 144; Significance: 1e-75; HSPs: 2)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 170406 - 170671
Alignment:
| Q |
20 |
caacttccttcctcattaaagaattgctcaaac---ttggctttattggatcttggagaaaatatgtttcatggtccattacctttatggattggagaca |
116 |
Q |
| |
|
|||||||||||||| || ||||||| ||||||| |||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
170406 |
caacttccttcctctttgaagaatttctcaaacaagttggctatgttggatcttggagaaaatatgtttcaaggtccattaccttcatggattggagaca |
170505 |
T |
 |
| Q |
117 |
gtttacaccaattaataatcttaagtcttcggttcaataaattcaatggaagtctaccttcaaatctctgttatttgagaaatcttcatgtcttagattt |
216 |
Q |
| |
|
|||| |||||| |||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||| | |
|
|
| T |
170506 |
acttacgacaattagtaatcttaagccttcgattcaataacttcaatggaagtctaccttcaaatctatgttatttgacaaaacttcatgtcttagatat |
170605 |
T |
 |
| Q |
217 |
gtcacttaatagcttatcaggaggaatcccaacttgtgtaaagaatcttactttaatggctcagga |
282 |
Q |
| |
|
|||||| |||| ||||||||||||||||| ||||||||||| ||| | |||| |||||||||||| |
|
|
| T |
170606 |
gtcactaaataatttatcaggaggaatccccacttgtgtaaacaatttaacttcaatggctcagga |
170671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 20 - 280
Target Start/End: Original strand, 181493 - 181756
Alignment:
| Q |
20 |
caacttccttcctcattaaagaattgctcaaac---ttggctttattggatcttggagaaaatatgtttcatggtccattacctttatggattggagaca |
116 |
Q |
| |
|
||||||||||||| || |||||||||| |||| |||||| | ||||||||||||||||||| ||||||||||||||||||| |||||||||| | | |
|
|
| T |
181493 |
caacttccttcctgtttgaagaattgctaaaacaagttggctctgttggatcttggagaaaataagtttcatggtccattacctgcatggattggacaaa |
181592 |
T |
 |
| Q |
117 |
gtttacaccaattaataatcttaagtcttcggttcaataaattcaatggaagtctaccttcaaatctctgttatttgagaaatcttcatgtcttagattt |
216 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| ||||| || |||||||||| ||| |||||||||||||||||||||| ||| ||||||||||| ||| | |
|
|
| T |
181593 |
gtttacaccaattagtaatcttaagccttcgattcaacaacttcaatggaattcttccttcaaatctctgttatttgacaaaacttcatgtcttggatct |
181692 |
T |
 |
| Q |
217 |
gtcacttaatagcttatcaggaggaatcccaacttgtgtaaagaatcttactttaatggctcag |
280 |
Q |
| |
|
||| | ||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||| |
|
|
| T |
181693 |
gtccgtaaatagcttatcaggaggaatcccaacttgtgtaaagaattttacttcaatgactcag |
181756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 17 - 281
Target Start/End: Complemental strand, 29506778 - 29506511
Alignment:
| Q |
17 |
ggacaacttccttcctcattaaagaattgctcaaac---ttggctttattggatcttggagaaaatatgtttcatggtccattacctttatggattggag |
113 |
Q |
| |
|
|||||| |||||||||| || |||||||| |||||| |||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
29506778 |
ggacaatttccttcctccttgaagaattgttcaaacaaattggctttgttggaccttggagaaaatatgtttcatggtccaataccttcatggattggag |
29506679 |
T |
 |
| Q |
114 |
acagtttacaccaattaataatcttaagtcttcggttcaataaattcaatggaagtctaccttcaaatctctgttatttgagaaatcttcatgtcttaga |
213 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||| ||||| | ||||| | ||| || |||||||| || |||||||||||| | ||||| ||||| || |
|
|
| T |
29506678 |
acagtttacaccagttaataatcttaagccttcgactcaatgatttcaacgaaagcctgccttcaaacctatgttatttgagagaacttcaagtcttgga |
29506579 |
T |
 |
| Q |
214 |
tttgtcacttaatagcttatcaggaggaatcccaacttgtgtaaagaatcttactttaatggctcagg |
281 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||| |
|
|
| T |
29506578 |
tttgtcactaaatagcttatcaggaggaatcccaacatgtgtaaagaattttacttcaatggctcagg |
29506511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 116; Significance: 6e-59; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 17 - 255
Target Start/End: Original strand, 26729139 - 26729380
Alignment:
| Q |
17 |
ggacaacttccttcctcattaaagaattgctcaaac---ttggctttattggatcttggagaaaatatgtttcatggtccattacctttatggattggag |
113 |
Q |
| |
|
||||||||| |||||||||| |||||||| |||||| |||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
26729139 |
ggacaacttacttcctcattgaagaattgttcaaacaagttggctttgttggaccttggagaaaatatgtttcatggtccattacctgcatggattggag |
26729238 |
T |
 |
| Q |
114 |
acagtttacaccaattaataatcttaagtcttcggttcaataaattcaatggaagtctaccttcaaatctctgttatttgagaaatcttcatgtcttaga |
213 |
Q |
| |
|
| ||||||| ||||||||||| ||||| |||||||||||||| ||| |||||||| ||||||||||| | |||||||||||||| ||| ||||| || |
|
|
| T |
26729239 |
agagtttacggcaattaataatattaagccttcggttcaataacttctatggaagtataccttcaaatatttgttatttgagaaaccttagagtcttgga |
26729338 |
T |
 |
| Q |
214 |
tttgtcacttaatagcttatcaggaggaatcccaacttgtgt |
255 |
Q |
| |
|
| | || || |||| ||||||||||||||||||||| ||||| |
|
|
| T |
26729339 |
tctttccctaaataacttatcaggaggaatcccaacatgtgt |
26729380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 8343546 - 8343790
Alignment:
| Q |
17 |
ggacaacttccttcctcattaaagaattgctcaaac---ttggctttattggatcttggagaaaatatgtttcatggtccattacctttatggattggag |
113 |
Q |
| |
|
||||||||||||||||| || || ||||||||||| ||| |||| ||||| |||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
8343546 |
ggacaacttccttcctccttgaaaaattgctcaaaaaagttgactttgttggaaattggagaaaataagtttcatggtccattaccttcatggattggag |
8343645 |
T |
 |
| Q |
114 |
acagtttacaccaattaataatcttaagtcttcggttcaataaattcaatggaagtctaccttcaaatctctgttatttgagaaatcttcatgtcttaga |
213 |
Q |
| |
|
||| ||||| |||||| |||||||||| |||| ||||||| |||||||||||| ||||||||||||| |||||||||||||| ||||||||||| || |
|
|
| T |
8343646 |
acaacttacatcaattagtaatcttaagcattcgagtcaataacttcaatggaagtataccttcaaatctttgttatttgagaaaacttcatgtcttgga |
8343745 |
T |
 |
| Q |
214 |
tttgtcacttaatagcttatcaggaggaatcccaacttgtgtaaa |
258 |
Q |
| |
|
| |||| || |||| |||||||||||| || ||| | |||||||| |
|
|
| T |
8343746 |
tctgtcgctaaataacttatcaggagggattccaccatgtgtaaa |
8343790 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 87 - 274
Target Start/End: Complemental strand, 29228046 - 29227859
Alignment:
| Q |
87 |
atggtccattacctttatggattggagacagtttacaccaattaataatcttaagtcttcggttcaataaattcaatggaagtctaccttcaaatctctg |
186 |
Q |
| |
|
||||| |||| ||||||||||||||||||||| |||| || | |||||||||| ||||| | || | ||||||||||||||| ||||||||||||| |
|
|
| T |
29228046 |
atggtgcattgcctttatggattggagacagtctacaaggatcactaatcttaagccttcgatctaacagcttcaatggaagtctagcttcaaatctctg |
29227947 |
T |
 |
| Q |
187 |
ttatttgagaaatcttcatgtcttagatttgtcacttaatagcttatcaggaggaatcccaacttgtgtaaagaatcttactttaatg |
274 |
Q |
| |
|
|||||||||| | ||||| || |||||| ||||||| |||||||| ||||||||||| ||| | ||||| |||||| |||||| |||| |
|
|
| T |
29227946 |
ttatttgagagaacttcaagtattagatctgtcactaaatagcttctcaggaggaattccatcatgtgttaagaattttacttcaatg |
29227859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 87 - 274
Target Start/End: Complemental strand, 29341345 - 29341158
Alignment:
| Q |
87 |
atggtccattacctttatggattggagacagtttacaccaattaataatcttaagtcttcggttcaataaattcaatggaagtctaccttcaaatctctg |
186 |
Q |
| |
|
||||| |||| ||||||||||||||||||||| |||| || | |||||||||| ||||| | || | ||||||||||||||| ||||||||||||| |
|
|
| T |
29341345 |
atggtgcattgcctttatggattggagacagtctacaaggatcactaatcttaagccttcgatctaacagcttcaatggaagtctagcttcaaatctctg |
29341246 |
T |
 |
| Q |
187 |
ttatttgagaaatcttcatgtcttagatttgtcacttaatagcttatcaggaggaatcccaacttgtgtaaagaatcttactttaatg |
274 |
Q |
| |
|
|||||||||| | ||||| || |||||| ||||||| |||||||| ||||||||||| ||| | ||||| |||||| |||||| |||| |
|
|
| T |
29341245 |
ttatttgagagaacttcaagtattagatctgtcactaaatagcttctcaggaggaattccatcatgtgttaagaattttacttcaatg |
29341158 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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