View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17470_low_2 (Length: 336)

Name: NF17470_low_2
Description: NF17470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17470_low_2
NF17470_low_2
[»] chr7 (37 HSPs)
chr7 (202-328)||(35983150-35983276)
chr7 (202-328)||(36004562-36004688)
chr7 (202-328)||(41378357-41378483)
chr7 (202-328)||(21993513-21993639)
chr7 (202-328)||(41585865-41585991)
chr7 (205-328)||(5995041-5995165)
chr7 (206-327)||(48227221-48227342)
chr7 (205-329)||(41037167-41037291)
chr7 (202-305)||(26927951-26928054)
chr7 (205-328)||(3203276-3203403)
chr7 (202-328)||(3961220-3961346)
chr7 (202-327)||(35221651-35221776)
chr7 (207-328)||(45100014-45100135)
chr7 (202-328)||(24611459-24611585)
chr7 (216-324)||(31953206-31953314)
chr7 (202-318)||(46003718-46003834)
chr7 (206-288)||(28333753-28333835)
chr7 (206-317)||(27131051-27131162)
chr7 (206-296)||(14656529-14656619)
chr7 (234-309)||(43077511-43077586)
chr7 (202-310)||(9522452-9522557)
chr7 (218-312)||(3350016-3350110)
chr7 (202-291)||(32392223-32392313)
chr7 (253-328)||(24251872-24251946)
chr7 (241-291)||(48624971-48625021)
chr7 (216-291)||(20009181-20009256)
chr7 (214-317)||(48709033-48709136)
chr7 (253-312)||(38368219-38368277)
chr7 (214-309)||(27946821-27946916)
chr7 (253-309)||(42373496-42373551)
chr7 (219-312)||(20568317-20568411)
chr7 (218-295)||(6559503-6559581)
chr7 (272-306)||(7596851-7596885)
chr7 (253-295)||(9401625-9401667)
chr7 (202-295)||(3875215-3875307)
chr7 (248-292)||(3407179-3407222)
chr7 (207-290)||(7596870-7596953)
[»] chr5 (29 HSPs)
chr5 (202-333)||(17689328-17689458)
chr5 (202-328)||(37172381-37172507)
chr5 (206-329)||(9741768-9741891)
chr5 (202-328)||(23204420-23204546)
chr5 (206-327)||(28813051-28813172)
chr5 (202-309)||(18015705-18015812)
chr5 (206-328)||(38758614-38758735)
chr5 (206-322)||(26730298-26730413)
chr5 (214-318)||(19323701-19323805)
chr5 (202-328)||(19995322-19995445)
chr5 (226-328)||(19325050-19325153)
chr5 (237-328)||(28038227-28038319)
chr5 (242-328)||(16994168-16994254)
chr5 (218-291)||(16490924-16490997)
chr5 (205-309)||(38293470-38293574)
chr5 (202-328)||(27365759-27365885)
chr5 (239-328)||(20269277-20269366)
chr5 (218-329)||(15978845-15978954)
chr5 (214-291)||(16490719-16490795)
chr5 (208-312)||(13960372-13960476)
chr5 (237-310)||(5497767-5497840)
chr5 (207-280)||(25593283-25593356)
chr5 (268-312)||(16273620-16273664)
chr5 (240-284)||(19323945-19323989)
chr5 (202-292)||(19863097-19863187)
chr5 (253-295)||(17232887-17232929)
chr5 (214-291)||(23129598-23129675)
chr5 (268-296)||(25593337-25593365)
chr5 (253-309)||(31042564-31042619)
[»] chr6 (20 HSPs)
chr6 (202-328)||(15081164-15081290)
chr6 (197-328)||(12159430-12159561)
chr6 (205-328)||(6322533-6322656)
chr6 (202-309)||(10075055-10075162)
chr6 (205-328)||(17347036-17347159)
chr6 (202-328)||(18102494-18102614)
chr6 (202-322)||(14975393-14975511)
chr6 (214-328)||(18096374-18096482)
chr6 (218-294)||(24553210-24553286)
chr6 (253-329)||(19104318-19104394)
chr6 (240-308)||(25090546-25090614)
chr6 (218-285)||(29427237-29427304)
chr6 (206-309)||(7190666-7190761)
chr6 (220-322)||(9533418-9533519)
chr6 (253-309)||(9891435-9891491)
chr6 (205-291)||(19143648-19143732)
chr6 (217-304)||(32645707-32645794)
chr6 (214-291)||(28295569-28295649)
chr6 (214-291)||(28516424-28516504)
chr6 (253-296)||(11742503-11742546)
[»] chr4 (41 HSPs)
chr4 (202-328)||(32626052-32626178)
chr4 (202-328)||(34728210-34728336)
chr4 (202-328)||(27907033-27907159)
chr4 (202-328)||(42434219-42434345)
chr4 (207-328)||(51702500-51702621)
chr4 (205-328)||(32868028-32868151)
chr4 (206-328)||(13372415-13372537)
chr4 (206-328)||(13382616-13382738)
chr4 (206-328)||(51682553-51682675)
chr4 (205-325)||(40875258-40875378)
chr4 (205-324)||(34041185-34041304)
chr4 (206-328)||(6137303-6137425)
chr4 (214-328)||(13387027-13387141)
chr4 (202-328)||(20835750-20835876)
chr4 (216-329)||(19329402-19329515)
chr4 (206-327)||(20503477-20503598)
chr4 (220-328)||(38427078-38427185)
chr4 (205-328)||(32089956-32090079)
chr4 (230-328)||(6944578-6944676)
chr4 (214-328)||(11020350-11020464)
chr4 (206-327)||(33117558-33117679)
chr4 (202-309)||(40479909-40480016)
chr4 (202-317)||(43837680-43837795)
chr4 (202-295)||(28589227-28589320)
chr4 (214-291)||(7645884-7645961)
chr4 (205-317)||(47960288-47960400)
chr4 (205-328)||(48860719-48860839)
chr4 (207-329)||(52719102-52719226)
chr4 (245-328)||(5975699-5975782)
chr4 (204-318)||(38962460-38962572)
chr4 (230-328)||(16467175-16467273)
chr4 (202-328)||(52344537-52344664)
chr4 (255-329)||(28755430-28755504)
chr4 (214-309)||(13387925-13388020)
chr4 (208-312)||(53773681-53773786)
chr4 (215-292)||(849240-849317)
chr4 (218-292)||(38792273-38792347)
chr4 (252-296)||(29102171-29102215)
chr4 (218-292)||(45875909-45875984)
chr4 (251-292)||(26335925-26335966)
chr4 (253-290)||(26889493-26889529)
[»] chr3 (53 HSPs)
chr3 (205-328)||(3283265-3283388)
chr3 (202-328)||(54253785-54253911)
chr3 (202-328)||(13700240-13700366)
chr3 (202-328)||(41355457-41355583)
chr3 (218-327)||(38101195-38101304)
chr3 (214-327)||(54411794-54411907)
chr3 (205-309)||(34673337-34673441)
chr3 (205-328)||(4126017-4126140)
chr3 (205-328)||(52945613-52945736)
chr3 (214-328)||(20513033-20513147)
chr3 (202-328)||(21395851-21395977)
chr3 (214-328)||(45408290-45408404)
chr3 (209-328)||(8351096-8351210)
chr3 (214-329)||(19228606-19228721)
chr3 (202-328)||(35280452-35280578)
chr3 (205-328)||(8674580-8674703)
chr3 (205-328)||(11238710-11238833)
chr3 (205-328)||(50090823-50090946)
chr3 (208-328)||(19855508-19855625)
chr3 (207-309)||(39328475-39328577)
chr3 (205-328)||(42092851-42092975)
chr3 (202-309)||(27037973-27038080)
chr3 (214-328)||(35711832-35711944)
chr3 (202-328)||(54160432-54160556)
chr3 (205-312)||(6125830-6125938)
chr3 (202-291)||(46969888-46969977)
chr3 (202-309)||(27026627-27026734)
chr3 (214-328)||(5232616-5232733)
chr3 (230-309)||(36418776-36418855)
chr3 (214-328)||(9665353-9665467)
chr3 (237-317)||(37702595-37702675)
chr3 (253-312)||(21481949-21482008)
chr3 (253-312)||(36227851-36227909)
chr3 (202-309)||(52089105-52089213)
chr3 (253-309)||(53518910-53518966)
chr3 (218-308)||(46354080-46354170)
chr3 (267-328)||(27432089-27432150)
chr3 (207-328)||(35180617-35180738)
chr3 (274-329)||(4043918-4043973)
chr3 (216-290)||(46770514-46770588)
chr3 (216-291)||(51614613-51614688)
chr3 (253-295)||(27418804-27418845)
chr3 (258-295)||(53518873-53518910)
chr3 (209-291)||(1375977-1376060)
chr3 (216-262)||(39866794-39866840)
chr3 (251-292)||(8814950-8814991)
chr3 (251-292)||(8815160-8815201)
chr3 (209-293)||(12127670-12127755)
chr3 (251-292)||(22894526-22894567)
chr3 (268-309)||(34673462-34673503)
chr3 (268-309)||(34673524-34673565)
chr3 (263-312)||(45408393-45408441)
chr3 (268-312)||(27418734-27418778)
[»] chr8 (43 HSPs)
chr8 (202-328)||(26912310-26912435)
chr8 (202-322)||(19922560-19922680)
chr8 (202-328)||(253937-254063)
chr8 (202-328)||(661795-661921)
chr8 (202-328)||(22812309-22812435)
chr8 (202-328)||(33568055-33568181)
chr8 (207-328)||(14916654-14916775)
chr8 (202-328)||(10078348-10078471)
chr8 (202-328)||(847593-847719)
chr8 (202-328)||(16930791-16930917)
chr8 (214-328)||(23472557-23472671)
chr8 (209-328)||(30774169-30774288)
chr8 (202-328)||(44873956-44874083)
chr8 (202-328)||(9478755-9478881)
chr8 (202-328)||(28539207-28539333)
chr8 (218-328)||(28969103-28969213)
chr8 (230-328)||(38498265-38498363)
chr8 (205-322)||(42806261-42806378)
chr8 (202-328)||(12295146-12295279)
chr8 (202-291)||(3210854-3210943)
chr8 (240-328)||(39077308-39077396)
chr8 (221-328)||(5224343-5224449)
chr8 (214-328)||(9479458-9479572)
chr8 (206-291)||(16645471-16645556)
chr8 (202-312)||(12176193-12176303)
chr8 (202-312)||(12420621-12420731)
chr8 (237-322)||(38092151-38092236)
chr8 (202-291)||(41624638-41624727)
chr8 (206-329)||(31272765-31272888)
chr8 (237-309)||(14041393-14041465)
chr8 (218-309)||(40067555-40067646)
chr8 (205-309)||(16784393-16784489)
chr8 (218-295)||(1983481-1983558)
chr8 (253-291)||(39589976-39590014)
chr8 (202-265)||(44508892-44508955)
chr8 (253-291)||(39077162-39077200)
chr8 (202-263)||(40067469-40067530)
chr8 (263-328)||(41829567-41829632)
chr8 (248-312)||(13326964-13327027)
chr8 (209-295)||(1201640-1201727)
chr8 (253-291)||(40301372-40301409)
chr8 (237-309)||(1271044-1271116)
chr8 (254-287)||(42556946-42556979)
[»] chr2 (32 HSPs)
chr2 (202-328)||(9548194-9548320)
chr2 (202-328)||(10664675-10664801)
chr2 (202-328)||(12725701-12725827)
chr2 (202-328)||(18924523-18924649)
chr2 (202-328)||(29471618-29471744)
chr2 (230-329)||(42090457-42090556)
chr2 (204-329)||(24314257-24314382)
chr2 (205-328)||(12895372-12895495)
chr2 (205-328)||(21950683-21950806)
chr2 (205-328)||(1749903-1750028)
chr2 (206-328)||(39089091-39089213)
chr2 (202-291)||(10862595-10862684)
chr2 (205-291)||(34450334-34450420)
chr2 (214-291)||(14747354-14747431)
chr2 (218-309)||(44539843-44539934)
chr2 (202-290)||(6231240-6231328)
chr2 (206-291)||(36779792-36779879)
chr2 (202-291)||(27097052-27097141)
chr2 (104-196)||(29511697-29511788)
chr2 (214-312)||(4206492-4206590)
chr2 (202-309)||(16719710-16719818)
chr2 (254-309)||(2969684-2969739)
chr2 (214-291)||(27175468-27175545)
chr2 (240-309)||(33740297-33740366)
chr2 (205-321)||(5534276-5534392)
chr2 (258-295)||(2969636-2969673)
chr2 (215-291)||(29511834-29511911)
chr2 (209-295)||(34125539-34125625)
chr2 (251-295)||(29512259-29512303)
chr2 (237-291)||(5601710-5601764)
chr2 (205-295)||(39961525-39961615)
chr2 (214-295)||(25880656-25880737)
[»] chr1 (42 HSPs)
chr1 (206-328)||(43939443-43939565)
chr1 (206-328)||(1838651-1838774)
chr1 (202-329)||(24992852-24992979)
chr1 (202-328)||(30414089-30414215)
chr1 (205-328)||(14463363-14463486)
chr1 (202-328)||(1627662-1627787)
chr1 (202-328)||(8549549-8549675)
chr1 (202-328)||(25670969-25671090)
chr1 (202-312)||(26897313-26897422)
chr1 (205-328)||(25825288-25825411)
chr1 (202-328)||(10769756-10769882)
chr1 (207-328)||(44720109-44720229)
chr1 (214-328)||(2964861-2964975)
chr1 (243-329)||(7336086-7336172)
chr1 (202-287)||(26284494-26284579)
chr1 (213-328)||(42470800-42470915)
chr1 (202-291)||(1469682-1469771)
chr1 (202-291)||(26842829-26842918)
chr1 (206-295)||(49660364-49660453)
chr1 (206-329)||(1406752-1406875)
chr1 (214-328)||(40461025-40461139)
chr1 (202-328)||(9005472-9005596)
chr1 (214-328)||(17168199-17168313)
chr1 (214-288)||(4105587-4105661)
chr1 (205-295)||(42470577-42470667)
chr1 (255-328)||(15661119-15661192)
chr1 (204-328)||(5226843-5226967)
chr1 (253-309)||(47921623-47921679)
chr1 (264-327)||(17452945-17453008)
chr1 (214-328)||(26213698-26213812)
chr1 (214-291)||(2752655-2752732)
chr1 (202-251)||(15660863-15660912)
chr1 (273-317)||(30819571-30819615)
chr1 (253-292)||(20201672-20201711)
chr1 (219-292)||(3273482-3273556)
chr1 (253-295)||(16005749-16005791)
chr1 (253-295)||(28454889-28454931)
chr1 (203-269)||(48875094-48875160)
chr1 (255-312)||(10835608-10835664)
chr1 (251-292)||(13264734-13264775)
chr1 (208-284)||(38509637-38509713)
chr1 (251-295)||(28764519-28764562)
[»] scaffold0002 (2 HSPs)
scaffold0002 (205-328)||(94799-94921)
scaffold0002 (243-328)||(478353-478438)
[»] scaffold0001 (1 HSPs)
scaffold0001 (209-328)||(392449-392568)
[»] scaffold0168 (1 HSPs)
scaffold0168 (219-328)||(35097-35206)
[»] scaffold0093 (1 HSPs)
scaffold0093 (205-328)||(9195-9317)
[»] scaffold0246 (1 HSPs)
scaffold0246 (202-309)||(17848-17955)
[»] scaffold0004 (1 HSPs)
scaffold0004 (237-328)||(121655-121746)
[»] scaffold0086 (1 HSPs)
scaffold0086 (202-291)||(8515-8604)
[»] scaffold0057 (1 HSPs)
scaffold0057 (202-292)||(75002-75092)
[»] scaffold0091 (1 HSPs)
scaffold0091 (221-318)||(3771-3867)
[»] scaffold0006 (1 HSPs)
scaffold0006 (240-329)||(231154-231243)
[»] scaffold0112 (1 HSPs)
scaffold0112 (207-291)||(35891-35975)
[»] scaffold0003 (2 HSPs)
scaffold0003 (202-312)||(103232-103343)
scaffold0003 (230-290)||(88185-88245)
[»] scaffold0009 (1 HSPs)
scaffold0009 (257-301)||(49890-49934)


Alignment Details
Target: chr7 (Bit Score: 99; Significance: 8e-49; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 35983276 - 35983150
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    |||| |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  35983276 cacctatgaaggtgtcttttagcaacccacaccttaaggtgtgattttcactttttagttataactttgctaaaagataccttcataaaaattaattggt 35983177  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||||| |||||||||||||||    
T  35983176 gtcttttagcaaatgctcatagaataa 35983150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 36004688 - 36004562
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    |||| |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  36004688 cacctatgaaggtgtcttttagcaacccacaccttaaggtgtgattttcactttttagttataactttgctaaaagataccttcataaaaattaattggt 36004589  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||||| |||||||||||||||    
T  36004588 gtcttttagcaaatgctcatagaataa 36004562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 41378357 - 41378483
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41378357 cacccatgaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattaattggt 41378456  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||||| ||| |||||||||||    
T  41378457 gtcttttagcaaatgttcatagaataa 41378483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 21993639 - 21993513
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||    
T  21993639 cacccatgaagttgtcttttagcaacccacacctcaaggtgtgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggt 21993540  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||  | ||||| |||||||||    
T  21993539 gtcttttaaaaaatgctaatagaataa 21993513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 41585865 - 41585991
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||  ||||    
T  41585865 cacccatgaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataattttgctaaaagacaccttcataaaaattagttggt 41585964  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || ||||| |||||||||    
T  41585965 gtcttttaacaaatgctaatagaataa 41585991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 205 - 328
Target Start/End: Original strand, 5995041 - 5995165
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttca-ttttttagttataactttgctaaaagacaccttcataaaaattaaatggtgt 303  Q
    |||||||| ||||||||||||| |||||||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||  ||||||    
T  5995041 ccatgaaggtgtcttttagcaatctacacctcaaggtgtgatttacacttttttagttataattttgctaaaagacaccttcataaaaattagttggtgt 5995140  T
Q  304 cttttagcatatgctcatagaataa 328  Q
    ||||||||| ||||||||| |||||    
T  5995141 cttttagcaaatgctcatataataa 5995165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 206 - 327
Target Start/End: Original strand, 48227221 - 48227342
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtct 305  Q
    ||||||| ||||||||||||||| |||| | |||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  48227221 catgaaggtgtcttttagcaacccacacttcaaggtgtgatttccactttttagttataactttgctaaaagacacctttataaaaattagttggtgtct 48227320  T
Q  306 tttagcatatgctcatagaata 327  Q
    ||||||| ||| ||||||||||    
T  48227321 tttagcaaatgatcatagaata 48227342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 329
Target Start/End: Complemental strand, 41037291 - 41037167
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| ||||||||| ||||| ||| || |||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||  | |||||    
T  41037291 ccatgaaggtgtcttttaacaacccacatctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaacttagtttgtgtc 41037192  T
Q  305 ttttagcatatgctcatagaataat 329  Q
    ||||| || ||||||||||||||||    
T  41037191 ttttaccaaatgctcatagaataat 41037167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 26927951 - 26928054
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||  |||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||    
T  26927951 cacccatgaaggtgtcttttagcaactcacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggt 26928050  T
Q  302 gtct 305  Q
    ||||    
T  26928051 gtct 26928054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 328
Target Start/End: Original strand, 3203276 - 3203403
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataacttt----gctaaaagacaccttcataaaaattaaatgg 300  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||||| ||||||||||||| |||    ||||||||||||||||||||||||||  |||    
T  3203276 ccatgaaggtgtcttttagcaacccacacctcaaggtgtgattttcactttttagttataaatttgctagctaaaagacaccttcataaaaattagttgg 3203375  T
Q  301 tgtcttttagcatatgctcatagaataa 328  Q
    ||||||| | || |||||||||||||||    
T  3203376 tgtctttaaacaaatgctcatagaataa 3203403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 3961346 - 3961220
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| |||||| ||| ||| ||||||| ||||||||||||| |||||||||| ||||||| ||||||||||  ||||    
T  3961346 cacccatgaaggtgtcttttagcaacccacacctcaagatgtcattttcaatttttagttataattttgctaaaaaacaccttaataaaaattagttggt 3961247  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || ||| |||||||||||    
T  3961246 gtcttttaacaaatgatcatagaataa 3961220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 327
Target Start/End: Original strand, 35221651 - 35221776
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    |||| |||||| ||||||||||||||| |||||| ||||||  ||||  | |||||||||||||||| ||||||||||||||||||||||||||  ||||    
T  35221651 caccaatgaaggtgtcttttagcaacccacacctcaaggtgaaatttctactttttagttataacttagctaaaagacaccttcataaaaattagttggt 35221750  T
Q  302 gtcttttagcatatgctcatagaata 327  Q
    |||||||| || ||||||||||||||    
T  35221751 gtcttttaacaaatgctcatagaata 35221776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 328
Target Start/End: Complemental strand, 45100135 - 45100014
Alignment:
Q  207 atgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctt 306  Q
    |||||| ||||||||||||||| || ||| ||| |||||||| || ||||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  45100135 atgaaggtgtcttttagcaacccacgcctcaagatgtgatttacactttttagttgtaactttgctaaaagacaccttcataaaaattagttggtgtctt 45100036  T
Q  307 ttagcatatgctcatagaataa 328  Q
    ||| || |||||||| ||||||    
T  45100035 ttaacaaatgctcattgaataa 45100014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 24611585 - 24611459
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    |||| |||||| ||||||||||||||| |||||| || |||||||||||| |||||||||||||||||| |||||||||| |||||||||||||  ||||    
T  24611585 cacctatgaaggtgtcttttagcaacccacacctcaatgtgtgattttcactttttagttataactttgttaaaagacactttcataaaaattagttggt 24611486  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
     |||||||  | ||||||| |||||||    
T  24611485 atcttttaataaatgctcagagaataa 24611459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 324
Target Start/End: Complemental strand, 31953314 - 31953206
Alignment:
Q  216 tcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatat 315  Q
    ||||||||||||  |||||| |||||||||||| || |||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||| || ||    
T  31953314 tcttttagcaacacacacctcaaggtgtgatttccactttttagttataactttgttaaaaaacaccttcataaaaattaattgatgtcttttaacaaat 31953215  T
Q  316 gctcataga 324  Q
    |||||||||    
T  31953214 gctcataga 31953206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 46003718 - 46003834
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||  |||||||||||||   ||| |||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||  || |    
T  46003718 cacccatgaatgtgtcttttagcaagtcacatcttaaggtgtaattttcactttttagttataactttgctaaaagacacctttataaaaattagttgat 46003817  T
Q  302 gtcttttagcatatgct 318  Q
    ||||||||||| |||||    
T  46003818 gtcttttagcaaatgct 46003834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 28333753 - 28333835
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcata 288  Q
    ||||||| ||||||||||||||| |||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28333753 catgaaggtgtcttttagcaaccaacacgtcaaggtgtgattttcactttttagttataactttgctaaaagacaccttcata 28333835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 27131162 - 27131051
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcat-tttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    ||||||| ||||||||||||| | |||||| ||||||||||| |||  |||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  27131162 catgaaggtgtcttttagcaatccacacctcaaggtgtgattatcaactttttagttataactt-gctaaaagacaccttcataaaaattagttggtgtc 27131064  T
Q  305 ttttagcatatgc 317  Q
    |||||||| ||||    
T  27131063 ttttagcaaatgc 27131051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 14656619 - 14656529
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaa 296  Q
    ||||||| |||||||||| |||| |||||| || ||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  14656619 catgaaggtgtcttttagaaacccacacctcaatgtgtgattttcaccttttagttataactttgttaaaagacaccttcataaaaattaa 14656529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 43077511 - 43077586
Alignment:
Q  234 cttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||||||    
T  43077511 cttaaggtgtgatattcattttttagttataactttgctaaaagaaaccttgataaaaattagttggtgtctttta 43077586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 310
Target Start/End: Original strand, 9522452 - 9522557
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||| ||||||| | |||||| |||||||||||| || |||||||||||||||||| ||||||||||||   |||||||||  ||||    
T  9522452 cacccatgaaggtgtctcttagcaatccacacctcaaggtgtgatttccactttttagttataactttgataaaagacacct---taaaaattagttggt 9522548  T
Q  302 gtcttttag 310  Q
    |||||||||    
T  9522549 gtcttttag 9522557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 312
Target Start/End: Original strand, 3350016 - 3350110
Alignment:
Q  218 ttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagca 312  Q
    ||||||||||| ||| || |||||||||||| || ||||||||||||| ||||||||||||||||||||| |||| ||  ||||||||| |||||    
T  3350016 ttttagcaacccacatctcaaggtgtgatttccactttttagttataattttgctaaaagacaccttcattaaaagtagttggtgtcttctagca 3350110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 32392223 - 32392313
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||| ||||||||||||||| |||||| |||||| |||| || | |||||||||||||  ||||||||||||||||||||||||    
T  32392223 cacccatgaaggtgtcttttagcaacccacacctcaaggtgagattatccactttttagttataaacttgctaaaagacaccttcataaaa 32392313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 24251946 - 24251872
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataa 328  Q
    |||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||| ||||| |||| ||||    
T  24251946 tttttagttataactt-gttaaaagacaccttcataaaaattaattggtgtcttttagcaaatgcttataggataa 24251872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 48624971 - 48625021
Alignment:
Q  241 tgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48624971 tgtgatttccattttttagttataactttgctaaaagacaccttcataaaa 48625021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 291
Target Start/End: Original strand, 20009181 - 20009256
Alignment:
Q  216 tcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||||  | |||| ||| ||||||||| | |||||||||||||||||| ||||||||||||||||||||    
T  20009181 tcttttagcaactcatacctcaagatgtgatttttactttttagttataactttgttaaaagacaccttcataaaa 20009256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 317
Target Start/End: Original strand, 48709033 - 48709136
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagca 312  Q
    ||||||| ||||| | |||||| ||||||||| | || | |||||||| ||||||| ||||||||||||||||||||||||||  | |||||||||||||    
T  48709033 tgtctttcagcaatccacacctcaaggtgtgactatccactttttagtaataactt-gctaaaagacaccttcataaaaattagttagtgtcttttagca 48709131  T
Q  313 tatgc 317  Q
     ||||    
T  48709132 aatgc 48709136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 38368277 - 38368219
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagca 312  Q
    |||||||||||||||| ||||||| ||||||||||||||||||  |||||||||||||||    
T  38368277 tttttagttataactt-gctaaaatacaccttcataaaaattagttggtgtcttttagca 38368219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 27946821 - 27946916
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttca-ttttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    |||||||||||||   ||| |||||| | ||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||  |||||| |||||    
T  27946821 tgtcttttagcaattcacatcttaagatatgattatcaattttttagttataa-tttgttaaaagacaccttcataaaaattagttggtgtgtttta 27946916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 42373496 - 42373551
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  42373496 tttttagttagaactt-gctaaaagacatcttcataaaaattaattggtgtctttta 42373551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 312
Target Start/End: Complemental strand, 20568411 - 20568317
Alignment:
Q  219 tttagcaacctacaccttaaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaaaa-ttaaatggtgtcttttagca 312  Q
    |||||||| | |||||| ||||||||||| || | ||||||||||||| ||||||| |||||||||| ||||||| |||  |||||||||||||||    
T  20568411 tttagcaatccacacctcaaggtgtgattatccactttttagttataa-tttgctacaagacaccttgataaaaaattacttggtgtcttttagca 20568317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 6559503 - 6559581
Alignment:
Q  218 ttttagcaacctacaccttaaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    |||||||||| | |||||||||||||  ||  | |||||||||||||| ||||||||||| ||||||| ||||||||||    
T  6559503 ttttagcaacattcaccttaaggtgtatttaacaattttttagttatatctttgctaaaacacaccttaataaaaatta 6559581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 306
Target Start/End: Complemental strand, 7596885 - 7596851
Alignment:
Q  272 taaaagacaccttcataaaaattaaatggtgtctt 306  Q
    ||||||||||||||||||||| |||||||||||||    
T  7596885 taaaagacaccttcataaaaactaaatggtgtctt 7596851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 9401667 - 9401625
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||    
T  9401667 tttttagttatatctttgctaaaacacaccttaataaaaatta 9401625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 3875307 - 3875215
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    ||||||||||  ||||||||| ||| | | |||| ||||||||||| |||  ||||  ||||||||| | ||||||| ||||||||||||||||    
T  3875307 cacccatgaaagtgtcttttaacaatccatacctcaaggtgtgattatcaactttttattataactt-gttaaaagaaaccttcataaaaatta 3875215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 3407179 - 3407222
Alignment:
Q  248 ttcattttttagttataactttgctaaaagacaccttcataaaaa 292  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||    
T  3407179 ttcactttttagttataactt-gctaaaagacagcttcataaaaa 3407222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 7596870 - 7596953
Alignment:
Q  207 atgaagttgtcttttagcaacctacaccttaaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaa 290  Q
    |||||| ||||||||| |||   |||||| || |||||||| || | ||||||||||||| |||| |||||||||||||||||||    
T  7596870 atgaaggtgtcttttaacaattcacacctcaatgtgtgattatccactttttagttataa-tttgttaaaagacaccttcataaa 7596953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 1e-44; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 202 - 333
Target Start/End: Original strand, 17689328 - 17689458
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||| ||| ||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||    
T  17689328 cacccattaaggtgtcttttagcaatccacaccttaaggtgtgattttcactttttagttataactttgctaaaagacaccttcataaaaatt-agtggt 17689426  T
Q  302 gtcttttagcatatgctcatagaataatctac 333  Q
    ||||||||||| ||||||||||||||| ||||    
T  17689427 gtcttttagcaaatgctcatagaataacctac 17689458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 37172381 - 37172507
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||| | | |||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||  ||||    
T  37172381 cacccatgaaggtgtcttttagcaatccataccttaaggtgtgattttcactttttagttataatttttctaaaagacaccttcataaaaattagttggt 37172480  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||||| |||||| ||||||||    
T  37172481 gtcttttagcaaatgctcgtagaataa 37172507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 206 - 329
Target Start/End: Complemental strand, 9741891 - 9741768
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtct 305  Q
    ||||||| ||||||||||||||| ||| || |||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||  |||||| |    
T  9741891 catgaaggtgtcttttagcaacccacatctcaaggtgtgatttccactttttagttataactttgctaaaaaacaccttcataaaaattagttggtgttt 9741792  T
Q  306 tttagcatatgctcatagaataat 329  Q
    ||||||| ||||||||||||||||    
T  9741791 tttagcaaatgctcatagaataat 9741768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 23204546 - 23204420
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| |||||||||||||   |||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  || |    
T  23204546 cacccatgaaggtgtcttttagcaagtcacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttgat 23204447  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || |||||||||||||||    
T  23204446 gtcttttaacaaatgctcatagaataa 23204420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 206 - 327
Target Start/End: Original strand, 28813051 - 28813172
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtct 305  Q
    ||||||| ||||||||||||||| |||||| |||||||||||| || ||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  28813051 catgaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacgcctttataaaaattagttggtgtct 28813150  T
Q  306 tttagcatatgctcatagaata 327  Q
    ||||||| ||| ||||||||||    
T  28813151 tttagcaaatgatcatagaata 28813172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 18015812 - 18015705
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||  ||||    
T  18015812 cacccatgaagatgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataactttgctaaaaaacaccttcataaaaattagttggt 18015713  T
Q  302 gtctttta 309  Q
    ||||||||    
T  18015712 gtctttta 18015705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 206 - 328
Target Start/End: Original strand, 38758614 - 38758735
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtct 305  Q
    ||||||| ||||||||||||||| ||| || ||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |  ||||||||    
T  38758614 catgaaggtgtcttttagcaacccacatctcaaggtgtgattttcactttttagttataactttgttaaaagacacctttataaaaatcagttggtgtct 38758713  T
Q  306 tttagcatatgctcatagaataa 328  Q
    ||||||| |||||||||||||||    
T  38758714 tttagca-atgctcatagaataa 38758735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 206 - 322
Target Start/End: Original strand, 26730298 - 26730413
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtct 305  Q
    ||||||| ||| |||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  26730298 catgaaggtgtgttttagcaacctacacctcaaggtttgattttcactttt-agttataactttgctaaaagacaccttcataaaaattagttggtgtct 26730396  T
Q  306 tttagcatatgctcata 322  Q
    |||| || |||||||||    
T  26730397 tttaacaaatgctcata 26730413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 19323701 - 19323805
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcat 313  Q
    |||||||||||||   ||||||||||||||||| | || ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||     
T  19323701 tgtcttttagcaaggcacaccttaaggtgtgatatccactttttagttataactttgctaaaagacactttcataaaaattaattggtgtcttttaacaa 19323800  T
Q  314 atgct 318  Q
    |||||    
T  19323801 atgct 19323805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 19995445 - 19995322
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    |||||||||||  |||||||||||| | |||||| |||||||||||| || |||||||||||||||||||||||||||||||||||   |||||  ||||    
T  19995445 cacccatgaaggggtcttttagcaatccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcat---aattagttggt 19995349  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    || ||||| || |||||||||||||||    
T  19995348 gttttttaacaaatgctcatagaataa 19995322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 226 - 328
Target Start/End: Original strand, 19325050 - 19325153
Alignment:
Q  226 acctacaccttaaggtgtgattttcattttttagttataa-ctttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcataga 324  Q
    |||| ||||| |||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||  |||| |||||||||| |||||||||||    
T  19325050 accttcacctcaaggtgtgatttccactttttagttataaactttgctaaaagacaccttcataaaaattagttggtttcttttagcaaatgctcataga 19325149  T
Q  325 ataa 328  Q
    ||||    
T  19325150 ataa 19325153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 237 - 328
Target Start/End: Original strand, 28038227 - 28038319
Alignment:
Q  237 aaggtgtgatttt-cattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataa 328  Q
    ||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||  |||||| |||||||| |||||||||||||||    
T  28038227 aaggtgtgatttttcactttttagttataactttactaaaagacaccttcataaaaattagttggtgtgttttagcaaatgctcatagaataa 28038319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 242 - 328
Target Start/End: Original strand, 16994168 - 16994254
Alignment:
Q  242 gtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataa 328  Q
    ||||||| || |||||||||||||||||||||||||||| ||||||||||||||  |||||||||||| || |||||||||||||||    
T  16994168 gtgatttgcactttttagttataactttgctaaaagacatcttcataaaaattagttggtgtcttttaacaaatgctcatagaataa 16994254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 218 - 291
Target Start/End: Original strand, 16490924 - 16490997
Alignment:
Q  218 ttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16490924 ttttagcaatccacacctcaaggtgtgattttcactttttagttataactttgctaaaagacaccttcataaaa 16490997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 205 - 309
Target Start/End: Original strand, 38293470 - 38293574
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| ||||||||| ||| | |||||| | |||||||||| || |||||||||||||||||| |||||||||| |||||||||||||  |||||||    
T  38293470 ccatgaagatgtcttttaacaatccacacctcatggtgtgatttccactttttagttataactttgttaaaagacacgttcataaaaattagttggtgtc 38293569  T
Q  305 tttta 309  Q
    |||||    
T  38293570 tttta 38293574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 27365885 - 27365759
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcat-tttttagttataactttgctaaaagacaccttcataaaaattaaatgg 300  Q
    ||||||||||| ||| ||||||||| | |||||| ||||||||||| |||  |||||||||||||||| ||||||||||||||| ||||||  ||  |||    
T  27365885 cacccatgaaggtgttttttagcaatccacacctcaaggtgtgattatcaactttttagttataactt-gctaaaagacacctttataaaacctaggtgg 27365787  T
Q  301 tgtcttttagcatatgctcatagaataa 328  Q
    ||||||||| || |||||||||||||||    
T  27365786 tgtcttttaacaaatgctcatagaataa 27365759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 20269366 - 20269277
Alignment:
Q  239 ggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataa 328  Q
    |||||||||| || ||||||||||||| |||  ||||||||||||||||||||||||| || |||||||||||| ||| |||||||||||    
T  20269366 ggtgtgatttccactttttagttataattttattaaaagacaccttcataaaaattaattgttgtcttttagcaaatgttcatagaataa 20269277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 329
Target Start/End: Complemental strand, 15978954 - 15978845
Alignment:
Q  218 ttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgc 317  Q
    ||||||||||  |||||| ||||||||||||| | ||||||||||||| |||| |||||||||| || ||||||||||  ||||||||||||||| || |    
T  15978954 ttttagcaac--acacctcaaggtgtgatttttactttttagttataattttgttaaaagacacttttataaaaattagttggtgtcttttagcaaatac 15978857  T
Q  318 tcatagaataat 329  Q
    ||||||| ||||    
T  15978856 tcatagattaat 15978845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 291
Target Start/End: Original strand, 16490719 - 16490795
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||| |||||||||| ||||||||| ||||||||||    
T  16490719 tgtcttttagcaacccacaccttaaggtgtgatttccactttttag-tataactttggtaaaagacatcttcataaaa 16490795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 13960372 - 13960476
Alignment:
Q  208 tgaagttgtcttttagcaacctacaccttaaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctt 306  Q
    ||||| ||| ||||||||| | |||||| ||| ||||||| || | |||||||| ||||  ||||||||||||||||||||||||||||  | |||||||    
T  13960372 tgaaggtgttttttagcaatcaacacctcaagatgtgattatccactttttagtcataaacttgctaaaagacaccttcataaaaattagct-gtgtctt 13960470  T
Q  307 ttagca 312  Q
    ||||||    
T  13960471 ttagca 13960476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 310
Target Start/End: Original strand, 5497767 - 5497840
Alignment:
Q  237 aaggtgtgattttcat-tttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttag 310  Q
    ||||||||||| |||  |||||||||||||||| ||| |||||||| |||||||||||||  |||||||||||||    
T  5497767 aaggtgtgattatcaactttttagttataactt-gctgaaagacactttcataaaaattagttggtgtcttttag 5497840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 280
Target Start/End: Complemental strand, 25593356 - 25593283
Alignment:
Q  207 atgaagttgtcttttagcaacctacaccttaaggtgtgatt-ttcattttttagttataactttgctaaaagaca 280  Q
    |||||| ||||||||||||||  |||||||||||||| ||| | || |||||||||||||| |||||||||||||    
T  25593356 atgaaggtgtcttttagcaactcacaccttaaggtgtaattatccactttttagttataac-ttgctaaaagaca 25593283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 312
Target Start/End: Original strand, 16273620 - 16273664
Alignment:
Q  268 ttgctaaaagacaccttcataaaaattaaatggtgtcttttagca 312  Q
    ||||||||||||||||||||||||||||  | |||||||||||||    
T  16273620 ttgctaaaagacaccttcataaaaattagtttgtgtcttttagca 16273664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 19323945 - 19323989
Alignment:
Q  240 gtgtgattttcattttttagttataactttgctaaaagacacctt 284  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||    
T  19323945 gtgtgatttccattttttagttataattatgctaaaagacacctt 19323989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 292
Target Start/End: Original strand, 19863097 - 19863187
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgatt-ttcattttttagttataactttgctaaaagacaccttcataaaaa 292  Q
    ||||||||||| ||||||||||||| | ||| || || |||||||| | || ||||||||| |||| ||| ||||||||||||||| |||||    
T  19863097 cacccatgaaggtgtcttttagcaatccacatctcaaagtgtgattatccactttttagttttaac-ttgttaaaagacaccttcacaaaaa 19863187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 17232929 - 17232887
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||    
T  17232929 tttttagttatatctttgctaaaatacaccttaataaaaatta 17232887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 291
Target Start/End: Original strand, 23129598 - 23129675
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcatt-ttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||||| | |||||| ||| ||||||| |||   ||||||||||||||| | ||||||||||||||||||||    
T  23129598 tgtcttttagcaatccacacctcaagatgtgattatcaaccttttagttataactt-gttaaaagacaccttcataaaa 23129675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 296
Target Start/End: Original strand, 25593337 - 25593365
Alignment:
Q  268 ttgctaaaagacaccttcataaaaattaa 296  Q
    |||||||||||||||||||||||||||||    
T  25593337 ttgctaaaagacaccttcataaaaattaa 25593365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 31042564 - 31042619
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    ||||| |||||||||| |||||||||||| || ||||||||||  ||||||||||||    
T  31042564 ttttttgttataactt-gctaaaagacactttaataaaaattagttggtgtctttta 31042619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 5e-44; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 15081290 - 15081164
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  15081290 cacccatgaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataacaattaattggt 15081191  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || |||||||||||||||    
T  15081190 gtcttttaacaaatgctcatagaataa 15081164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 197 - 328
Target Start/End: Original strand, 12159430 - 12159561
Alignment:
Q  197 atatgcacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaa 296  Q
    |||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  12159430 atatacacccatgaaggtgtcttttagcaacccacacctcaaggtgtgattttcactttttagttataactttgctaaaagacaccttcataaaaattag 12159529  T
Q  297 atggtgtcttttagcatatgctcatagaataa 328  Q
     ||||||||| || || ||||| ||| |||||    
T  12159530 ttggtgtcttctaacaaatgctaatataataa 12159561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 205 - 328
Target Start/End: Complemental strand, 6322656 - 6322533
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| ||||||||||||| | ||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||| | ||||     
T  6322656 ccatgaaggtgtcttttagcaatccacaccttaaggtgtggtttccactttttagttataactttgctaaaagacaccttcataaaaattaatttgtgtt 6322557  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    ||||| || ||||| |||||||||    
T  6322556 ttttaacaaatgctaatagaataa 6322533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 10075162 - 10075055
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||| ||| ||||||||||||||  |||||| |||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||  ||||    
T  10075162 cacccataaaggtgtcttttagcaactcacacctcaaggtgtgatttccactttttaattataactttgttaaaagacaccttcataaaaattagttggt 10075063  T
Q  302 gtctttta 309  Q
    ||||||||    
T  10075062 gtctttta 10075055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 205 - 328
Target Start/End: Original strand, 17347036 - 17347159
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| ||| ||||||||| | | || |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  17347036 ccatgaaggtgttttttagcaatccatactttaaggtgtgatttccactttttagttataactttgctaaaagacatcttcataaaaattagttggtgtc 17347135  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    ||||| || ||||| ||| |||||    
T  17347136 ttttaacaaatgctaatataataa 17347159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 18102614 - 18102494
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||||| || ||||||||||||||| |||||      ||||||||||||||||  ||||    
T  18102614 cacccatgaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataactctgcta------accttcataaaaattagttggt 18102521  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || |||||||||||||||    
T  18102520 gtcttttaacaaatgctcatagaataa 18102494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 322
Target Start/End: Original strand, 14975393 - 14975511
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| |||||||||||| |||||||||  |||||||||||| |||||||||| |||||||||| |||||||  ||||    
T  14975393 cacccatgaaggtgtcttttagcaacccacaccttaaggtatgattttcaccttttagttataa-tttgctaaaaaacaccttcat-aaaattagttggt 14975490  T
Q  302 gtcttttagcatatgctcata 322  Q
    ||||||||  | |||||||||    
T  14975491 gtcttttaaaaaatgctcata 14975511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 18096482 - 18096374
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcat 313  Q
    ||||||||||||||| |||||| |||||||||||| || ||||||||||||||| |||||      ||||||||||||||||  |||||||||||| ||     
T  18096482 tgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataactctgcta------accttcataaaaattagttggtgtcttttaacaa 18096389  T
Q  314 atgctcatagaataa 328  Q
    |||||||||||||||    
T  18096388 atgctcatagaataa 18096374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 24553210 - 24553286
Alignment:
Q  218 ttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaatt 294  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||||||  ||||| |||||||||||||||||    
T  24553210 ttttagcaacctacaccttaaggtatgatttccactttttagttataactttattaaaaaacaccttcataaaaatt 24553286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 253 - 329
Target Start/End: Original strand, 19104318 - 19104394
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataat 329  Q
    |||||||||||||||||||||||| |||||||| |||||||||  |||||||||||| || ||||||||| ||||||    
T  19104318 tttttagttataactttgctaaaacacaccttcgtaaaaattagttggtgtcttttaacaaatgctcataaaataat 19104394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 25090546 - 25090614
Alignment:
Q  240 gtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttt 308  Q
    ||||||||| || |||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  25090546 gtgtgatttccactttttagttataactttgctgaaagacaccttcataaaaattaattggtgtttttt 25090614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 29427237 - 29427304
Alignment:
Q  218 ttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttc 285  Q
    ||||||||| | |||||| |||||||||||| || |||||||||||||||||||||||||||||||||    
T  29427237 ttttagcaatccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttc 29427304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 309
Target Start/End: Complemental strand, 7190761 - 7190666
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtct 305  Q
    ||||||| ||||||||||||| | ||||||||||||||||||||||  ||||||| ||||||||        ||||||||||||||||||  ||||||||    
T  7190761 catgaaggtgtcttttagcaaaccacaccttaaggtgtgattttcaccttttagtcataacttt--------acaccttcataaaaattagttggtgtct 7190670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 322
Target Start/End: Complemental strand, 9533519 - 9533418
Alignment:
Q  220 ttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctc 319  Q
    ||||||| | |||||| |||||||||||| || |||| | ||||||||||| |||||||||||||||||||||||   | |||||||||| || ||||||    
T  9533519 ttagcaatccacacctcaaggtgtgatttccacttttaa-ttataactttgttaaaagacaccttcataaaaatttgttagtgtcttttaacaaatgctc 9533421  T
Q  320 ata 322  Q
    |||    
T  9533420 ata 9533418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 9891491 - 9891435
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    ||||||||||||| ||||||||||||||| |||||||||||||  ||||||||||||    
T  9891491 tttttagttataaatttgctaaaagacacattcataaaaattagttggtgtctttta 9891435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 19143732 - 19143648
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    |||||||| | |||||||| || | | |||| |||||||||||| || ||||||||||||  |||||||||||||||||||||||||    
T  19143732 ccatgaaggtttcttttagaaatccatacctcaaggtgtgatttccactttttagttata--tttgctaaaagacaccttcataaaa 19143648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 304
Target Start/End: Complemental strand, 32645794 - 32645707
Alignment:
Q  217 cttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||||| | |||||| ||||| |||| | || |||||||| | ||||||| |||||||||| |||||||||||||  |||||||    
T  32645794 cttttagcaagccacacctcaaggtatgatatccactttttagtaagaactttgttaaaagacactttcataaaaattagttggtgtc 32645707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 291
Target Start/End: Complemental strand, 28295649 - 28295569
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgct---aaaagacaccttcataaaa 291  Q
    ||||||||||||| | |||||| |||||||||| | || ||||| |||||||||||| |   |||||||||||||||||||    
T  28295649 tgtcttttagcaagccacacctcaaggtgtgatatccactttttggttataactttgttaaaaaaagacaccttcataaaa 28295569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 291
Target Start/End: Original strand, 28516424 - 28516504
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgct---aaaagacaccttcataaaa 291  Q
    ||||||||||||| | |||||| |||||||||| | || ||||| |||||||||||| |   |||||||||||||||||||    
T  28516424 tgtcttttagcaagccacacctcaaggtgtgatatccactttttggttataactttgttaaaaaaagacaccttcataaaa 28516504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 11742503 - 11742546
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaattaa 296  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||    
T  11742503 tttttagttatatctttgctaaaatacaccttaataaaaattaa 11742546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 5e-44; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 32626052 - 32626178
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  32626052 cacccatgaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaacttcataaaaattagttggt 32626151  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||||| |||||||||||||||    
T  32626152 gtcttttagcaaatgctcatagaataa 32626178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 34728210 - 34728336
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||    
T  34728210 cacccatgaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggt 34728309  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||||| ||||| |||||||||    
T  34728310 gtcttttagcaaatgcttatagaataa 34728336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 27907159 - 27907033
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| |||||||||||| || |||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||    
T  27907159 cacccatgaaggtgtcttttagcagcccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggt 27907060  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || |||||||||||||||    
T  27907059 gtcttttaacaaatgctcatagaataa 27907033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 42434219 - 42434345
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||  ||||||||||||  | |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||    
T  42434219 cacccatgaaagtgtcttttagcattccacacctcaaggtgtgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggt 42434318  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || |||||||||||||||    
T  42434319 gtcttttaacaaatgctcatagaataa 42434345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 207 - 328
Target Start/End: Complemental strand, 51702621 - 51702500
Alignment:
Q  207 atgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctt 306  Q
    |||||| ||||||||||||||| |||||| |||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||  |||| ||||    
T  51702621 atgaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataactttgttaaaagacaccttcataaaaattagttggtttctt 51702522  T
Q  307 ttagcatatgctcatagaataa 328  Q
    |||||| |||||||||||||||    
T  51702521 ttagcaaatgctcatagaataa 51702500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 205 - 328
Target Start/End: Complemental strand, 32868151 - 32868028
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| | |||||||| || | |||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  32868151 ccatgaaggtatcttttagtaatccacacctcaaggtgtgattttcactttttagttataactttgctaaaacacaccttcataaaaattagttggtgtc 32868052  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    |||||||| |||||||||||||||    
T  32868051 ttttagcaaatgctcatagaataa 32868028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 206 - 328
Target Start/End: Complemental strand, 13372537 - 13372415
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtct 305  Q
    ||||||| ||||||||| |||||||||||| ||||| |||||| || ||||| |||||||||||||||||||||||||||||||||||||  ||||||||    
T  13372537 catgaaggtgtcttttaacaacctacacctcaaggtatgatttccacttttttgttataactttgctaaaagacaccttcataaaaattagttggtgtct 13372438  T
Q  306 tttagcatatgctcatagaataa 328  Q
    ||||||| |||||||| ||||||    
T  13372437 tttagcaaatgctcatggaataa 13372415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 206 - 328
Target Start/End: Complemental strand, 13382738 - 13382616
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtct 305  Q
    ||||||| ||||||||| |||||||||||| ||||| |||||| || ||||| |||||||||||||||||||||||||||||||||||||  ||||||||    
T  13382738 catgaaggtgtcttttaacaacctacacctcaaggtatgatttccacttttttgttataactttgctaaaagacaccttcataaaaattagttggtgtct 13382639  T
Q  306 tttagcatatgctcatagaataa 328  Q
    ||||||| |||||||| ||||||    
T  13382638 tttagcaaatgctcatggaataa 13382616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 206 - 328
Target Start/End: Original strand, 51682553 - 51682675
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtct 305  Q
    ||||||| ||||||||||||||| |||||| |||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||  ||||||||    
T  51682553 catgaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataactttgttaaaagacaccttcataaaaattagttggtgtct 51682652  T
Q  306 tttagcatatgctcatagaataa 328  Q
    |||| || ||| |||||||||||    
T  51682653 tttaacaaatgttcatagaataa 51682675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 205 - 325
Target Start/End: Complemental strand, 40875378 - 40875258
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||| ||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  40875378 ccataaaggtgtcttttagcaacccacaccttaaggtttgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtc 40875279  T
Q  305 ttttagcatatgctcatagaa 325  Q
    ||| | || || |||||||||    
T  40875278 tttgaacaaatactcatagaa 40875258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 205 - 324
Target Start/End: Original strand, 34041185 - 34041304
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| ||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  34041185 ccatgaaggtgtcttttagcaacccacacctcaagttgtgattttcactttttagttataactttgctaaaagacaccttcattaaaattacttggtgtc 34041284  T
Q  305 ttttagcatatgctcataga 324  Q
    ||||| || ||||| |||||    
T  34041285 ttttaacaaatgcttataga 34041304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 206 - 328
Target Start/End: Complemental strand, 6137425 - 6137303
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtct 305  Q
    ||||||| ||||||||||||||  |||||| || ||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  6137425 catgaaggtgtcttttagcaactcacacctcaatgtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtct 6137326  T
Q  306 tttagcatatgctcatagaataa 328  Q
    |||| || ||||| |||||||||    
T  6137325 tttaacaaatgctaatagaataa 6137303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 13387141 - 13387027
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcat 313  Q
    ||||||||| ||||  |||||| |||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||     
T  13387141 tgtcttttaacaacacacacctcaaggtgtgattttcacattttagttataactatgctaaaagacaccttcataaaaattagttggtgtcttttagcaa 13387042  T
Q  314 atgctcatagaataa 328  Q
    |||||||||||||||    
T  13387041 atgctcatagaataa 13387027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 20835876 - 20835750
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| |||||| |||| ||||||| |||||||||||||||||||||||||||||||||||| ||||| |||  ||||    
T  20835876 cacccatgaaggtgtcttttagcaacccacacctcaaggggtgatttccattttttagttataactttgctaaaagacaccttcgtaaaatttagttggt 20835777  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
     ||||||| || ||||| |||||||||    
T  20835776 atcttttaacaaatgctaatagaataa 20835750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 216 - 329
Target Start/End: Complemental strand, 19329515 - 19329402
Alignment:
Q  216 tcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatat 315  Q
    ||||||||||||| ||| || |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  |||||||||||| || ||    
T  19329515 tcttttagcaacccacatctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaat 19329416  T
Q  316 gctcatagaataat 329  Q
    | ||||||||||||    
T  19329415 gatcatagaataat 19329402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 206 - 327
Target Start/End: Complemental strand, 20503598 - 20503477
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtct 305  Q
    ||||||| ||| ||||||||||| || ||| |||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  20503598 catgaaggtgttttttagcaacccacgcctcaaggtgtgatttccactttttagttataactttgctaaaagacacctttataaaaattagttggtgtct 20503499  T
Q  306 tttagcatatgctcatagaata 327  Q
    ||||||| ||| ||||||||||    
T  20503498 tttagcaaatgatcatagaata 20503477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 220 - 328
Target Start/End: Original strand, 38427078 - 38427185
Alignment:
Q  220 ttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctc 319  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||| || ||| |     
T  38427078 ttagcaacc-acaccttaaggtgtgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgtta 38427176  T
Q  320 atagaataa 328  Q
    |||||||||    
T  38427177 atagaataa 38427185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 328
Target Start/End: Original strand, 32089956 - 32090079
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| ||||||||||||||| ||||||  |||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||  |||||||    
T  32089956 ccatgaagatgtcttttagcaacccacacctcgaggtgtgattttcactttttagttataactttgttaaaagacacattcataaaaattagttggtgtc 32090055  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    ||||| || ||||| ||| |||||    
T  32090056 ttttaacaaatgctaataaaataa 32090079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 230 - 328
Target Start/End: Original strand, 6944578 - 6944676
Alignment:
Q  230 acaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataa 328  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||| |||||||||||||||    
T  6944578 acaccttaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaacttagttggtgtcgtttagcaaatgctcatagaataa 6944676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 214 - 328
Target Start/End: Original strand, 11020350 - 11020464
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcat 313  Q
    ||||||||||||||| ||| || |||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| ||     
T  11020350 tgtcttttagcaacccacatctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaaataattggtatcttttaacaa 11020449  T
Q  314 atgctcatagaataa 328  Q
    ||| |||||||||||    
T  11020450 atgttcatagaataa 11020464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 206 - 327
Target Start/End: Complemental strand, 33117679 - 33117558
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtct 305  Q
    ||||||| |||||||||| |||| ||||||||| |||||  ||||| |||||||||||||||||| ||||||||||||| ||||||||||  ||||| ||    
T  33117679 catgaaggtgtcttttagaaacccacaccttaaagtgtgcatttcactttttagttataactttgttaaaagacacctttataaaaattagttggtgact 33117580  T
Q  306 tttagcatatgctcatagaata 327  Q
    ||||||| ||| ||||||||||    
T  33117579 tttagcaaatgatcatagaata 33117558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 40480016 - 40479909
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||  || ||| |||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||  || |    
T  40480016 cacccatgaaggtgtcttttagcaactcacgcctcaaggtgtgatttccactttttagttataactttgctaaaaaacaccttcataaaaattagttgat 40479917  T
Q  302 gtctttta 309  Q
    ||||||||    
T  40479916 gtctttta 40479909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 317
Target Start/End: Original strand, 43837680 - 43837795
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaaaattaaatgg 300  Q
    ||||||||||| ||||||||||||| | |||||| ||||||||||| || | |||||||||||||||| |||||| |||||||||||||||||||  |||    
T  43837680 cacccatgaaggtgtcttttagcaatccacacctcaaggtgtgattatccactttttagttataactt-gctaaaggacaccttcataaaaattagttgg 43837778  T
Q  301 tgtcttttagcatatgc 317  Q
    |||||||||||| ||||    
T  43837779 tgtcttttagcaaatgc 43837795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 28589227 - 28589320
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    ||||||||||| ||||||||| ||| | | |||| ||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  28589227 cacccatgaaggtgtcttttaacaatccatacctcaaggtgtgattttcactttttagttataactttgctaaaaaacatcttcataaaaatta 28589320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 214 - 291
Target Start/End: Original strand, 7645884 - 7645961
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||||||| ||  || ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  7645884 tgtcttttagcaacccacggctcaaggtgtgattttcactttttagttataactttgctaaaagataccttcataaaa 7645961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 205 - 317
Target Start/End: Original strand, 47960288 - 47960400
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaaaattaaatggtgt 303  Q
    |||||||  |||||||||||||   |||||| |||||| |||| || |||||||||||||||||| ||||||||||||||||||||||||||  ||||||    
T  47960288 ccatgaaagtgtcttttagcaattcacacctcaaggtgagattatccattttttagttataactt-gctaaaagacaccttcataaaaattagttggtgt 47960386  T
Q  304 cttttagcatatgc 317  Q
    ||||||||| ||||    
T  47960387 cttttagcaaatgc 47960400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 205 - 328
Target Start/End: Original strand, 48860719 - 48860839
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| ||| |||||||||   ||| || ||||| |||||| |||||||||||||||||||||| |||||||||||||||   |||||  |||||||    
T  48860719 ccatgaaggtgttttttagcaattcacatctcaaggtttgatttccattttttagttataactttgcgaaaagacaccttcat---aattagttggtgtc 48860815  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    ||||| || |||||||||||||||    
T  48860816 ttttaacaaatgctcatagaataa 48860839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 207 - 329
Target Start/End: Complemental strand, 52719226 - 52719102
Alignment:
Q  207 atgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaag--acaccttcataaaaattaaatggtgtc 304  Q
    |||||| |||||||||||||| ||||| | ||| ||||||||||| ||||||||||||| |||| ||||||  |||||||| |||||||||  || ||||    
T  52719226 atgaagatgtcttttagcaacttacacttcaagatgtgattttcactttttagttataattttgttaaaagacacaccttcgtaaaaattagttgatgtc 52719127  T
Q  305 ttttagcatatgctcatagaataat 329  Q
    ||||| || ||||| ||||||||||    
T  52719126 ttttaacaaatgctaatagaataat 52719102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 245 - 328
Target Start/End: Complemental strand, 5975782 - 5975699
Alignment:
Q  245 attttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataa 328  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||| | || ||||| ||| |||||    
T  5975782 attttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtctttcaacaaatgctaatataataa 5975699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 204 - 318
Target Start/End: Complemental strand, 38962572 - 38962460
Alignment:
Q  204 cccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgt 303  Q
    ||||||||| ||| ||||| ||||| |||||| ||||||||||||||| |||||| ||||||||||||||||  ||| ||| ||||||||||  ||||||    
T  38962572 cccatgaaggtgttttttaacaacccacacctcaaggtgtgattttcactttttatttataactttgctaaa--acatctttataaaaattagttggtgt 38962475  T
Q  304 cttttagcatatgct 318  Q
    |||||| || |||||    
T  38962474 cttttaacaaatgct 38962460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 328
Target Start/End: Original strand, 16467175 - 16467273
Alignment:
Q  230 acaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataa 328  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||  |||||  ||||| || ||| ||||| |||||    
T  16467175 acacctcaaggtgtgattttcactttttagttataactttgttaaaagataccttcataaaaattagttggtgctttttaacaaatgttcatataataa 16467273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 52344664 - 52344537
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaaaattaaatgg 300  Q
    ||||||||| | ||||||||||||||| |||||| |||||| |||  || | |||||| ||||||  |||||||||||||| |||||||| ||||  |||    
T  52344664 cacccatgatggtgtcttttagcaacccacacctcaaggtgagatcatccactttttaattataaacttgctaaaagacacattcataaatattagttgg 52344565  T
Q  301 tgtcttttagcatatgctcatagaataa 328  Q
    ||||||||| || ||||| |||||||||    
T  52344564 tgtcttttaacaaatgcttatagaataa 52344537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 28755504 - 28755430
Alignment:
Q  255 tttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataat 329  Q
    ||||||||||| |||  ||||||||| ||||||||||||||| |||||||||||| || ||||||||| ||||||    
T  28755504 tttagttataattttattaaaagacaacttcataaaaattaattggtgtcttttaacaaatgctcataaaataat 28755430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 309
Target Start/End: Complemental strand, 13388020 - 13387925
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    |||||||||||||   | |||| |||||||||| | || ||||||||||||| ||||||||||| |||||| |||||||||   ||||||||||||    
T  13388020 tgtcttttagcaagtcatacctcaaggtgtgatatccactttttagttataattttgctaaaaggcacctttataaaaatttgttggtgtctttta 13387925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 53773681 - 53773786
Alignment:
Q  208 tgaagttgtcttttagcaacctacaccttaaggtgtgattttcat-tttttagttataactttgctaaaa-gacaccttcataaaaattaaatggtgtct 305  Q
    ||||| ||||||||||||| | |||| | ||||||||||| |||  |||||||||||||||| ||||||| |||||| ||||||||||||  ||||||||    
T  53773681 tgaaggtgtcttttagcaatcaacacttcaaggtgtgattatcaactttttagttataactt-gctaaaaagacaccatcataaaaattagttggtgtct 53773779  T
Q  306 tttagca 312  Q
    | |||||    
T  53773780 tctagca 53773786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 849240 - 849317
Alignment:
Q  215 gtcttttagcaacctacaccttaaggtgtgattt-tcattttttagttataactttgctaaaagacaccttcataaaaa 292  Q
    ||||||||||||||||||| | ||| ||| |||  ||| |||||||||||||||| |||||||||||||||| ||||||    
T  849240 gtcttttagcaacctacacttcaagatgtaattactcactttttagttataactt-gctaaaagacaccttcctaaaaa 849317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 38792273 - 38792347
Alignment:
Q  218 ttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaa 292  Q
    ||||||||||| | | || ||||||| |||| ||  ||||||||||||||||||||||||| ||||| |||||||    
T  38792273 ttttagcaacccatatctcaaggtgtaatttccaccttttagttataactttgctaaaagatacctttataaaaa 38792347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 29102171 - 29102215
Alignment:
Q  252 ttttttagttataactttgctaaaagacaccttcataaaaattaa 296  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||    
T  29102171 ttttttagttatatctttgctaaaacacaccttaataaaaattaa 29102215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 45875909 - 45875984
Alignment:
Q  218 ttttagcaacctacaccttaaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaaaa 292  Q
    |||||||||| | |||||||||||||  ||  | |||||||||||||| ||||||||||| ||||||| |||||||    
T  45875909 ttttagcaacattcaccttaaggtgtatttaacaattttttagttatatctttgctaaaacacaccttaataaaaa 45875984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 26335925 - 26335966
Alignment:
Q  251 attttttagttataactttgctaaaagacaccttcataaaaa 292  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  26335925 attttttagttatatctttgctaaaatacaccttaataaaaa 26335966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 290
Target Start/End: Complemental strand, 26889529 - 26889493
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaa 290  Q
    |||||||||||||||| |||||||||||||||||||||    
T  26889529 tttttagttataactt-gctaaaagacaccttcataaa 26889493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 3e-42; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 205 - 328
Target Start/End: Original strand, 3283265 - 3283388
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  3283265 ccatgaaggtgtcttttagcaacccacacctcaaggtgtgatttttactttttagttatagctttgctaaaagacaccttcataaaaattagttggtgtc 3283364  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    |||||||| |||||||||||||||    
T  3283365 ttttagcaaatgctcatagaataa 3283388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 54253785 - 54253911
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||  ||||    
T  54253785 cacccatgaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataactttgttaaaagacaccttcataaaaattagttggt 54253884  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||| | |||||||||||||||    
T  54253885 gtcttttaggaaatgctcatagaataa 54253911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 13700240 - 13700366
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| |||||| || ||||||||| || |||||||||||||||||| ||||||| ||||||||||||||||  ||||    
T  13700240 cacccatgaaggtgtcttttagcaacccacacctcaatgtgtgatttccactttttagttataactttgttaaaagataccttcataaaaattagttggt 13700339  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||||| ||||||| |||||||    
T  13700340 gtcttttagcaaatgctcaaagaataa 13700366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 41355583 - 41355457
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| ||| || |||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||  ||||    
T  41355583 cacccatgaaggtgtcttttagcaacccacaactcaaggtgtgatttccactttttagttataactttgctataagacaccttcataaaaattagttggt 41355484  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || |||||||| ||||||    
T  41355483 gtcttttaacaaatgctcattgaataa 41355457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 218 - 327
Target Start/End: Original strand, 38101195 - 38101304
Alignment:
Q  218 ttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgc 317  Q
    |||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| |||     
T  38101195 ttttagcaacctacacctcaaggtgtgatttccactttttagttataactttgctaaaagacacctttataaaaattagttggtgtcttttagcaaatga 38101294  T
Q  318 tcatagaata 327  Q
    ||||||||||    
T  38101295 tcatagaata 38101304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 214 - 327
Target Start/End: Original strand, 54411794 - 54411907
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcat 313  Q
    |||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||| ||||||| ||||||||||  |||||||||||||||     
T  54411794 tgtcttttagcaacctacacctcaaggtgtgatttccactttttagttataactttgctaaaaaacacctttataaaaattagttggtgtcttttagcaa 54411893  T
Q  314 atgctcatagaata 327  Q
    ||| ||||||||||    
T  54411894 atgatcatagaata 54411907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 309
Target Start/End: Original strand, 34673337 - 34673441
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| ||||||||||||||| |||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  || ||||    
T  34673337 ccatgaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttgatgtc 34673436  T
Q  305 tttta 309  Q
    |||||    
T  34673437 tttta 34673441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 328
Target Start/End: Complemental strand, 4126140 - 4126017
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| |||||||||| || | |||||| |||||||||||| || |||||| ||||||||||||||||||| || |||||||||||||| || ||||    
T  4126140 ccatgaaggtgtcttttagtaatccacacctcaaggtgtgatttccactttttaattataactttgctaaaagatacattcataaaaattaattgatgtc 4126041  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    |||||||| |||||||||||||||    
T  4126040 ttttagcaaatgctcatagaataa 4126017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 328
Target Start/End: Complemental strand, 52945736 - 52945613
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| ||||||||||||||  |||||| || ||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||| |    
T  52945736 ccatgaaggtgtcttttagcaactcacacctcaaagtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgcc 52945637  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    ||||| || |||||||| ||||||    
T  52945636 ttttaccaaatgctcattgaataa 52945613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 214 - 328
Target Start/End: Original strand, 20513033 - 20513147
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcat 313  Q
    ||||||||||||||| ||||   |||||||||||| || |||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||| ||     
T  20513033 tgtcttttagcaacccacactccaaggtgtgatttccactttttagttataactttgttaaaaaacaccttcataaaaattaattggtgtcttttaacaa 20513132  T
Q  314 atgctcatagaataa 328  Q
    |||||||||||||||    
T  20513133 atgctcatagaataa 20513147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 21395851 - 21395977
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||  ||||| || ||| ||||||||||||||| ||||||||||||||||||||||||||||| || |||||| |||  ||||    
T  21395851 cacccatgaaggtgtcttttgacaacccacgcctcaaggtgtgattttcactttttagttataactttgctaaaagacacatttataaaatttagttggt 21395950  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || |||||||||||||||    
T  21395951 gtcttttaacaaatgctcatagaataa 21395977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 45408404 - 45408290
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcat 313  Q
    ||||||||||||||  |||||| |||||||||||| || ||||||||||||| |||| ||||||||||||||||||||||||  | |||||||||||||     
T  45408404 tgtcttttagcaacgcacacctcaaggtgtgatttccactttttagttataattttggtaaaagacaccttcataaaaattagtttgtgtcttttagcaa 45408305  T
Q  314 atgctcatagaataa 328  Q
    |||||||||||||||    
T  45408304 atgctcatagaataa 45408290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 209 - 328
Target Start/End: Complemental strand, 8351210 - 8351096
Alignment:
Q  209 gaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttt 308  Q
    |||| ||||||||||||||| |||||||     ||||||| ||||||||||||||||||||| |||||||||| |||||||||||||  |||||||||||    
T  8351210 gaaggtgtcttttagcaacccacacctt-----gtgatttccattttttagttataactttgttaaaagacacattcataaaaattagttggtgtctttt 8351116  T
Q  309 agcatatgctcatagaataa 328  Q
    |||| |||||||||||||||    
T  8351115 agcaaatgctcatagaataa 8351096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 214 - 329
Target Start/End: Complemental strand, 19228721 - 19228606
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcat 313  Q
    |||||||||| |||  |||| | ||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||  |||||||||||||||     
T  19228721 tgtcttttagaaactcacacttcaaggtgtgattttcactttttaattataattttgttaaaagacaccttcataaaaattagttggtgtcttttagcaa 19228622  T
Q  314 atgctcatagaataat 329  Q
    ||||||||||||||||    
T  19228621 atgctcatagaataat 19228606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 35280578 - 35280452
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||| ||||||||||| ||| || |||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||  | ||    
T  35280578 cacccatgaaggtgtgttttagcaacccacaactcaaggtgtgatttccactttttagttataactttgctaaaaaacaccttcataaaaattagtttgt 35280479  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
     ||||||| || ||||||||| |||||    
T  35280478 atcttttaacaaatgctcatataataa 35280452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 205 - 328
Target Start/End: Complemental strand, 8674703 - 8674580
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| |||||||||||||   | |||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |  |||| |     
T  8674703 ccatgaaggtgtcttttagcaattcatacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaatcagttggtctg 8674604  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    |||||||| ||||||||| |||||    
T  8674603 ttttagcaaatgctcataaaataa 8674580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 205 - 328
Target Start/End: Complemental strand, 11238833 - 11238710
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||  ||||||||||||||| |||||| ||||||||||||  | |||||||||||||||||| ||||| ||| ||||||||||||||  || ||||    
T  11238833 ccatgaatgtgtcttttagcaacccacacctcaaggtgtgatttctactttttagttataactttgttaaaatacatcttcataaaaattagttgatgtc 11238734  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    ||||| || |||||||||||||||    
T  11238733 ttttaacaaatgctcatagaataa 11238710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 205 - 328
Target Start/End: Original strand, 50090823 - 50090946
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| ||||||||||||| | ||||||||||||||||||| || ||||||||||||| |||||||||| |||| |||||||||||||  |||||||    
T  50090823 ccatgaaggtgtcttttagcaatccacaccttaaggtgtgatttccactttttagttataattttgctaaaaaacactttcataaaaattagttggtgtc 50090922  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    ||| | || ||| | |||||||||    
T  50090923 tttcaccaaatgttaatagaataa 50090946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 328
Target Start/End: Complemental strand, 19855625 - 19855508
Alignment:
Q  208 tgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttt 307  Q
    ||||| ||||||||||||| | ||||||    ||||||||| || ||||||||||||| |||||||||||||||||||||||||||||  ||||||||||    
T  19855625 tgaaggtgtcttttagcaatccacacctc---gtgtgatttccactttttagttataattttgctaaaagacaccttcataaaaattagttggtgtcttt 19855529  T
Q  308 tagcatatgctcatagaataa 328  Q
    ||||| |||||| ||||||||    
T  19855528 tagcaaatgctcgtagaataa 19855508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 207 - 309
Target Start/End: Complemental strand, 39328577 - 39328475
Alignment:
Q  207 atgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctt 306  Q
    |||||| ||||||||| ||| | |||||| |||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||  |||||||||    
T  39328577 atgaaggtgtcttttaacaatccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacactttcataaaaattagttggtgtctt 39328478  T
Q  307 tta 309  Q
    |||    
T  39328477 tta 39328475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 205 - 328
Target Start/End: Complemental strand, 42092975 - 42092851
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgct-aaaagacaccttcataaaaattaaatggtgt 303  Q
    |||||||| ||| ||||||||| | |||||| ||||| |||||| ||||||||||||||||||||||| |||| ||||||| ||||||||||| ||||||    
T  42092975 ccatgaaggtgttttttagcaatccacacctcaaggtatgatttccattttttagttataactttgctaaaaaaacacctttataaaaattaattggtgt 42092876  T
Q  304 cttttagcatatgctcatagaataa 328  Q
    |||||| || |  ||||||||||||    
T  42092875 cttttaacaaagactcatagaataa 42092851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 27037973 - 27038080
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| |||||||||| ||||  ||||| |||| ||||||| || ||||||||||||| ||||||||||||||||||||||||||| |  ||||    
T  27037973 cacccatgaaggtgtcttttagaaacccccacctcaaggcgtgatttccactttttagttataattttgctaaaagacaccttcataaaaatgagttggt 27038072  T
Q  302 gtctttta 309  Q
    ||||||||    
T  27038073 gtctttta 27038080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 328
Target Start/End: Original strand, 35711832 - 35711944
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcat 313  Q
    |||||||||| |||| |||||| ||  |||||||| || ||||||| |||| |||||||||||||||||||||||||| |||  |||||||||||||||     
T  35711832 tgtcttttagtaacccacacctcaa--tgtgatttccactttttagctatagctttgctaaaagacaccttcataaaagttagctggtgtcttttagcaa 35711929  T
Q  314 atgctcatagaataa 328  Q
    |||||||||||||||    
T  35711930 atgctcatagaataa 35711944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 54160556 - 54160432
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    |||| |||||| |||||||||| || | |||||| ||||||  ||||||| ||||| |||||||||||| ||||||||||||||||||||||||  ||||    
T  54160556 caccaatgaagatgtcttttagtaatccacacctcaaggtg--attttcacttttttgttataactttgttaaaagacaccttcataaaaattagttggt 54160459  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || ||||| |||||||||    
T  54160458 gtcttttaacaaatgcttatagaataa 54160432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 205 - 312
Target Start/End: Complemental strand, 6125938 - 6125830
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttca--ttttttagttataactttgctaaaagacaccttcataaaaattaaatggtg 302  Q
    |||||||| ||| |||||||||| ||||||| ||||||||||| ||   ||||||||||||||||| ||||||||||||||||||||||||||  |||||    
T  6125938 ccatgaaggtgttttttagcaacttacacctcaaggtgtgattatccacttttttagttataactt-gctaaaagacaccttcataaaaattagttggtg 6125840  T
Q  303 tcttttagca 312  Q
    ||||||||||    
T  6125839 tcttttagca 6125830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 46969888 - 46969977
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||| ||||||||||||||| |||| | ||||| |||||| || ||||||||||||| |||||||||||||||||||||||||    
T  46969888 cacccatgaaggtgtcttttagcaacccacacatcaaggtatgatttccactttttagttataattttgctaaaagacaccttcataaaa 46969977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 27026627 - 27026734
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||  |||||||||| ||||  ||||| ||||||| |||| || ||||||||||||| ||||||||||||||||||| |||||||||  ||||    
T  27026627 cacccatgaatgtgtcttttagaaacccccacctcaaggtgtaatttccactttttagttataattttgctaaaagacaccttcctaaaaattagttggt 27026726  T
Q  302 gtctttta 309  Q
    ||||||||    
T  27026727 gtctttta 27026734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 214 - 328
Target Start/End: Original strand, 5232616 - 5232733
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaag---acaccttcataaaaattaaatggtgtcttttag 310  Q
    ||||||||||||||| ||||||||||||||||||  || ||||||||| |||||||||||| ||   ||||||| ||||||||||  ||||||||||||     
T  5232616 tgtcttttagcaacccacaccttaaggtgtgattcccactttttagttgtaactttgctaacagagtacacctttataaaaattagttggtgtcttttaa 5232715  T
Q  311 catatgctcatagaataa 328  Q
    || |||||  ||||||||    
T  5232716 caaatgcttctagaataa 5232733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 230 - 309
Target Start/End: Complemental strand, 36418855 - 36418776
Alignment:
Q  230 acaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    ||||||||||||||||| | || |||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  36418855 acaccttaaggtgtgatatccactttttaattataactttgctaaaagacaccttgataaaaaataattggtgtctttta 36418776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 9665467 - 9665353
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcat 313  Q
    ||||||||||||||| | |||| || |||||||||||| ||||||||||||||||||| |||  ||||||||||||||||||  |  ||||||||| ||     
T  9665467 tgtcttttagcaacccatacctcaatgtgtgattttcactttttagttataactttgcaaaagaacaccttcataaaaattagttaatgtcttttaacaa 9665368  T
Q  314 atgctcatagaataa 328  Q
    ||| | |||||||||    
T  9665367 atgttaatagaataa 9665353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 237 - 317
Target Start/End: Original strand, 37702595 - 37702675
Alignment:
Q  237 aaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgc 317  Q
    |||||||||| | || |||||||||||||||||||||||| ||||||||||||||||||  |||||||| |||||| ||||    
T  37702595 aaggtgtgatatccactttttagttataactttgctaaaaaacaccttcataaaaattagttggtgtctattagcaaatgc 37702675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 21482008 - 21481949
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagca 312  Q
    |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  21482008 tttttagttataactttgttaaaagacaccttcataaaaattagctggtgtcttttagca 21481949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 36227909 - 36227851
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagca 312  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  36227909 tttttagttataactt-gctaaaagacaccttcataaaaattaattggtgtcttttagca 36227851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 52089213 - 52089105
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaaaattaaatgg 300  Q
    ||||||||||| ||||||||||||||| ||| || ||||||  ||| || | |||||||||||||  ||||||||||||||||||||||| ||||  |||    
T  52089213 cacccatgaaggtgtcttttagcaacccacatctcaaggtgatattatccactttttagttataaacttgctaaaagacaccttcataaatattagttgg 52089114  T
Q  301 tgtctttta 309  Q
    ||| |||||    
T  52089113 tgtttttta 52089105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 53518910 - 53518966
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    |||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  53518910 tttttagttataactttgttaaaagacactttcataaaaattaattggtgtctttta 53518966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 46354170 - 46354080
Alignment:
Q  218 ttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttt 308  Q
    ||||||||||| ||| |||||| ||| ||||| | ||||||||||||| |||  |||||||||| |||||||||||||  |||||| ||||    
T  46354170 ttttagcaacccacatcttaagatgtaatttttactttttagttataattttattaaaagacactttcataaaaattagttggtgtttttt 46354080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 328
Target Start/End: Complemental strand, 27432150 - 27432089
Alignment:
Q  267 tttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataa 328  Q
    |||||||||| ||||||||||||||||||  ||||||||||||| | |||| ||||||||||    
T  27432150 tttgctaaaaaacaccttcataaaaattatttggtgtcttttagtaaatgcccatagaataa 27432089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 328
Target Start/End: Complemental strand, 35180738 - 35180617
Alignment:
Q  207 atgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctt 306  Q
    |||||| |||||||||  |||  | |||| ||||||||||||  | |||||| ||||||||||| |||||||||  |||||||||||||| || ||| ||    
T  35180738 atgaaggtgtcttttaaaaactcatacctcaaggtgtgatttctactttttaattataactttgttaaaagacaatttcataaaaattaattgatgtatt 35180639  T
Q  307 ttagcatatgctcatagaataa 328  Q
    ||| || ||||| ||| |||||    
T  35180638 ttaacaaatgctaataaaataa 35180617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 4043973 - 4043918
Alignment:
Q  274 aaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataat 329  Q
    |||||| |||||||||||||||  |||||||||||| || ||||||||||||||||    
T  4043973 aaagacgccttcataaaaattagttggtgtcttttaacagatgctcatagaataat 4043918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 46770588 - 46770514
Alignment:
Q  216 tcttttagcaacctacaccttaaggtgtgattttcat-tttttagttataactttgctaaaagacaccttcataaa 290  Q
    ||||||||||| | |||||| ||| ||||||| |||  |||||||||||||||| |||||||||||||||||||||    
T  46770588 tcttttagcaatccacacctcaagttgtgattatcaactttttagttataactt-gctaaaagacaccttcataaa 46770514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 291
Target Start/End: Original strand, 51614613 - 51614688
Alignment:
Q  216 tcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||| | |||||| || |||||||||  | ||||||||||||| ||| |||||||||||||| ||||||    
T  51614613 tcttttagcaatccacacctcaatgtgtgatttggactttttagttataattttactaaaagacacctttataaaa 51614688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 27418804 - 27418845
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  27418804 tttttagttataactt-gctaaaagacaccttcataaaaatta 27418845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 295
Target Start/End: Complemental strand, 53518910 - 53518873
Alignment:
Q  258 agttataactttgctaaaagacaccttcataaaaatta 295  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  53518910 agttataactttgctaagagacaccttcataaaaatta 53518873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 1376060 - 1375977
Alignment:
Q  209 gaagttgtcttttagcaacctacaccttaaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaaa 291  Q
    |||| ||| |||||||||| | |||||||||||||  ||  | |||||||||||||| ||||||||||| ||||||| ||||||    
T  1376060 gaaggtgtgttttagcaacattcaccttaaggtgtatttaacaattttttagttatatctttgctaaaacacaccttaataaaa 1375977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 262
Target Start/End: Original strand, 39866794 - 39866840
Alignment:
Q  216 tcttttagcaacctacaccttaaggtgtgattttcattttttagtta 262  Q
    ||||||||||||| |||||| |||||||||||| || ||||||||||    
T  39866794 tcttttagcaacccacacctcaaggtgtgatttccactttttagtta 39866840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 8814950 - 8814991
Alignment:
Q  251 attttttagttataactttgctaaaagacaccttcataaaaa 292  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  8814950 attttttagttatatctttgctaaaatacaccttaataaaaa 8814991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 8815160 - 8815201
Alignment:
Q  251 attttttagttataactttgctaaaagacaccttcataaaaa 292  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  8815160 attttttagttatatctttgctaaaatacaccttaataaaaa 8815201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 12127670 - 12127755
Alignment:
Q  209 gaagttgtcttttagcaacctacaccttaaggtgtgattttcat-tttttagttataactttgctaaaagacaccttcataaaaat 293  Q
    |||| ||| |||||||||| | |||||||||||||  ||  ||  |||||||||||| ||||||||||| ||||||| ||||||||    
T  12127670 gaaggtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaacacaccttaataaaaat 12127755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 22894567 - 22894526
Alignment:
Q  251 attttttagttataactttgctaaaagacaccttcataaaaa 292  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  22894567 attttttagttatatctttgctaaaacacaccttaataaaaa 22894526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 34673462 - 34673503
Alignment:
Q  268 ttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    ||||||||||||||||||||||||||||  || |||||||||    
T  34673462 ttgctaaaagacaccttcataaaaattagttgatgtctttta 34673503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 34673524 - 34673565
Alignment:
Q  268 ttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    ||||||||||||||||||||||||||||  || |||||||||    
T  34673524 ttgctaaaagacaccttcataaaaattagttgatgtctttta 34673565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 45408441 - 45408393
Alignment:
Q  263 taactttgctaaaagacaccttcataaaaattaaatggtgtcttttagca 312  Q
    |||||||| |||||||||| |||||||||||||  |||||||||||||||    
T  45408441 taactttgttaaaagacac-ttcataaaaattagttggtgtcttttagca 45408393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 312
Target Start/End: Complemental strand, 27418778 - 27418734
Alignment:
Q  268 ttgctaaaagacaccttcataaaaattaaatggtgtcttttagca 312  Q
    ||||||||||||||||||||||||| |||  |||||||| |||||    
T  27418778 ttgctaaaagacaccttcataaaaactaataggtgtcttctagca 27418734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 26912310 - 26912435
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||| ||||||||||| |||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||  ||||    
T  26912310 cacccatgaaggtgt-ttttagcaacccacacctcaaggtgtgattttcacttttcagttataactttgctaaaagacaccttcataaaaattagttggt 26912408  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||||| |||||||||||||||    
T  26912409 gtcttttagcaaatgctcatagaataa 26912435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 202 - 322
Target Start/End: Complemental strand, 19922680 - 19922560
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19922680 cacccatgaaggtgtcttttagcaacccacacctcaaggtgtgatttccaccttttagttataactttgctaaaagacaccttcataaaaattaattggt 19922581  T
Q  302 gtcttttagcatatgctcata 322  Q
    |||||||| || |||||||||    
T  19922580 gtcttttaacaaatgctcata 19922560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 253937 - 254063
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    |||| |||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||  ||||    
T  253937 cacctatgaaggtgtcttttagcaacctacacctcaaggtgtgattttcactttttagttataactttgctaaaagacactttcctaaaaattagttggt 254036  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || ||| |||||||||||    
T  254037 gtcttttaacaaatgttcatagaataa 254063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 661921 - 661795
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    |||| |||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||  ||||    
T  661921 cacctatgaaggtgtcttttagcaacctacacctcaaggtgtgattttcactttttagttataactttgctaaaagacactttcctaaaaattagttggt 661822  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || ||| |||||||||||    
T  661821 gtcttttaacaaatgttcatagaataa 661795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 22812309 - 22812435
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| || |||||||||||| |||||| ||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||  ||||    
T  22812309 cacccatgaaggtgccttttagcaacccacacctcaagatgtgattttcactttttagttataactttgttaaaagacaccttcataaaaattagttggt 22812408  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || |||||||||||||||    
T  22812409 gtcttttaacaaatgctcatagaataa 22812435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 33568055 - 33568181
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||| ||||||||| | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||  ||||    
T  33568055 cacccatgaaggtgttttttagcaatccacacctcaaggtgtgatttttattttttagttataactttgctaaaagacaccttcataaaaactagttggt 33568154  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || |||||||||||||||    
T  33568155 gtcttttaacaaatgctcatagaataa 33568181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 207 - 328
Target Start/End: Original strand, 14916654 - 14916775
Alignment:
Q  207 atgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctt 306  Q
    |||||| ||||||||||||||  |||||||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||||||||||  |||| ||||    
T  14916654 atgaaggtgtcttttagcaactcacaccttaaggtgtgattttcacttttttgttataactttgttaaaagataccttcataaaaattagttggtatctt 14916753  T
Q  307 ttagcatatgctcatagaataa 328  Q
    |||||| |||||||||||||||    
T  14916754 ttagcaaatgctcatagaataa 14916775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 10078471 - 10078348
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    |||||| |||| ||||||||||||||| |||||| |||||||||||| || ||||||||||   ||||||||||||||||||||||||||||||  ||||    
T  10078471 cacccaagaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttagtta---ctttgctaaaagacaccttcataaaaattagttggt 10078375  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||||| |||||||||||||||    
T  10078374 gtcttttagcaaatgctcatagaataa 10078348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 847719 - 847593
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    |||| |||||| |||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| | | |||||||||  ||||    
T  847719 cacctatgaaggtgtcttttagcaacctacacctcaaggtgtgattttcactttttagttttaactttgctaaaagacacttccctaaaaattagttggt 847620  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || ||| |||||||||||    
T  847619 gtcttttaacaaatgttcatagaataa 847593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 16930791 - 16930917
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||| | |||||| |||||||||||| || |||||||||||||||||||||||| |||| |||||||||||||  ||||    
T  16930791 cacccatgaaggtgtcttttagcaatccacacctcaaggtgtgatttccactttttagttataactttgctaaaaaacactttcataaaaattagttggt 16930890  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||  | |||||||||||||||    
T  16930891 gtcttttaaaaaatgctcatagaataa 16930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 23472671 - 23472557
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcat 313  Q
    ||||||||||||| ||||| || |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||     
T  23472671 tgtcttttagcaatctacaactcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtatcttttagcaa 23472572  T
Q  314 atgctcatagaataa 328  Q
    || ||||||||||||    
T  23472571 atcctcatagaataa 23472557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 209 - 328
Target Start/End: Complemental strand, 30774288 - 30774169
Alignment:
Q  209 gaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttt 308  Q
    |||| ||||||||||||||| ||||||||||||||||||| || |||||||||||| ||||| |||| || ||||||||||||||||  |||| ||||||    
T  30774288 gaaggtgtcttttagcaacccacaccttaaggtgtgatttccactttttagttatacctttgttaaaggataccttcataaaaattagttggtatctttt 30774189  T
Q  309 agcatatgctcatagaataa 328  Q
    |||| |||||||||||||||    
T  30774188 agcaaatgctcatagaataa 30774169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 44874083 - 44873956
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcatttt-ttagttataactttgctaaaagacaccttcataaaaattaaatgg 300  Q
    ||||||||||| ||||||||||||| | ||||| |||||| |||||| || ||  ||| ||||||||||||||||||||||||||||||||||||  |||    
T  44874083 cacccatgaaggtgtcttttagcaatccacaccctaaggtttgatttccacttcattaattataactttgctaaaagacaccttcataaaaattagctgg 44873984  T
Q  301 tgtcttttagcatatgctcatagaataa 328  Q
    |||||||||||| |||||||||||||||    
T  44873983 tgtcttttagcaaatgctcatagaataa 44873956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 9478881 - 9478755
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| | ||||||||||||| |||||| || ||||||||| || |||||||||||||||||| ||||||||||||||||||||||||  ||||    
T  9478881 cacccatgaagatatcttttagcaacccacacctcaaagtgtgatttccactttttagttataactttgttaaaagacaccttcataaaaattagttggt 9478782  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || ||| | |||||||||    
T  9478781 gtcttttaacaaatgttaatagaataa 9478755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 28539333 - 28539207
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    |||| |||||| ||||||||||||||| ||| || || || ||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||    
T  28539333 cacctatgaaggtgtcttttagcaacccacatctcaatgtttgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggt 28539234  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
     ||||||| || ||||||||| |||||    
T  28539233 atcttttaacaaatgctcataaaataa 28539207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 218 - 328
Target Start/End: Original strand, 28969103 - 28969213
Alignment:
Q  218 ttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgc 317  Q
    ||||||||||| |||| | |||||||||||| || |||||||||||||||||| ||||||| || |||||||||||||| |||||||||||| || ||||    
T  28969103 ttttagcaacccacacttcaaggtgtgatttccactttttagttataactttgttaaaagatactttcataaaaattaattggtgtcttttaacaaatgc 28969202  T
Q  318 tcatagaataa 328  Q
    |||||||||||    
T  28969203 tcatagaataa 28969213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 230 - 328
Target Start/End: Original strand, 38498265 - 38498363
Alignment:
Q  230 acaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataa 328  Q
    |||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||| | |||||||||    
T  38498265 acacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattaattggtgtcttttaacaaatgttaatagaataa 38498363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 205 - 322
Target Start/End: Complemental strand, 42806378 - 42806261
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||  ||||||||||||| | |||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  | |||||    
T  42806378 ccatgaaagtgtcttttagcaatccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagtttgtgtc 42806279  T
Q  305 ttttagcatatgctcata 322  Q
    || || || |||||||||    
T  42806278 ttctaacaaatgctcata 42806261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 12295146 - 12295279
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacacc-------ttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaatt 294  Q
    ||||||||||| ||||||||||||||| |||||       | |||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||    
T  12295146 cacccatgaaggtgtcttttagcaacccacaccccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaattt 12295245  T
Q  295 aaatggtgtcttttagcatatgctcatagaataa 328  Q
    || |||| ||||||| || ||||| |||||||||    
T  12295246 aattggtatcttttaacaaatgctaatagaataa 12295279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 3210854 - 3210943
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||| ||||||||||||||| |||||| ||||||| |||| || |||||| ||||||||||||||||||||||||||||||||    
T  3210854 cacccatgaaggtgtcttttagcaacccacacctcaaggtgttatttccactttttaattataactttgctaaaagacaccttcataaaa 3210943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 240 - 328
Target Start/End: Original strand, 39077308 - 39077396
Alignment:
Q  240 gtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataa 328  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||  |||||||||||| || ||| |||||||||||    
T  39077308 gtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataa 39077396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 221 - 328
Target Start/End: Complemental strand, 5224449 - 5224343
Alignment:
Q  221 tagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctca 320  Q
    |||||||  |||||| |||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| || ||| |||    
T  5224449 tagcaactcacacctcaaggtgtgatttccactttttagttataactttgctaaaa-acaccttcataaaaattagttggtgtcttttaacaaatgttca 5224351  T
Q  321 tagaataa 328  Q
    ||||||||    
T  5224350 tagaataa 5224343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 9479572 - 9479458
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcat 313  Q
    ||||||||| ||||  || ||||||  |||||||| || |||||||||||||||||| |||||||||| |||||||||||||  | |||||||||||||     
T  9479572 tgtcttttaacaactcaccccttaaattgtgatttccactttttagttataactttgttaaaagacactttcataaaaattagtttgtgtcttttagcaa 9479473  T
Q  314 atgctcatagaataa 328  Q
    |||||||||||||||    
T  9479472 atgctcatagaataa 9479458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 16645471 - 16645556
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||| ||||||||||||||| | |||| |||||||||||| || ||||||||||||||||| |||||||||||||||||||||    
T  16645471 catgaaggtgtcttttagcaacccatacctcaaggtgtgatttccactttttagttataactttactaaaagacaccttcataaaa 16645556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 12176193 - 12176303
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcat-tttttagttataactttgctaaaagacaccttcataaaaattaaatgg 300  Q
    ||||||||||| ||||||||||||| | |||||| ||||||||||| |||  |||||||||||||| | ||||||||||||||| ||||||||||  |||    
T  12176193 cacccatgaaggtgtcttttagcaatccacacctcaaggtgtgattatcaactttttagttataacct-gctaaaagacaccttgataaaaattatttgg 12176291  T
Q  301 tgtcttttagca 312  Q
    ||||||||||||    
T  12176292 tgtcttttagca 12176303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 12420621 - 12420731
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcat-tttttagttataactttgctaaaagacaccttcataaaaattaaatgg 300  Q
    ||||||||||| ||||||||||||| | |||||| ||||||||||| |||  |||||||||||||| | ||||||||||||||| ||||||||||  |||    
T  12420621 cacccatgaaggtgtcttttagcaatccacacctcaaggtgtgattatcaactttttagttataacct-gctaaaagacaccttgataaaaattatttgg 12420719  T
Q  301 tgtcttttagca 312  Q
    ||||||||||||    
T  12420720 tgtcttttagca 12420731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 38092236 - 38092151
Alignment:
Q  237 aaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcata 322  Q
    |||||||||||| || |||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||| || |||||||||    
T  38092236 aaggtgtgatttccactttttagttataactttgttaaatgacacgttcataaaaattaattggtgtcttttaacaaatgctcata 38092151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 41624638 - 41624727
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||  ||||||||||||||  |||||| ||||||||||||| | |||||||||||||||||| |||||||||||||| |||||    
T  41624638 cacccatgaaagtgtcttttagcaactcacacctcaaggtgtgatttttactttttagttataactttgttaaaagacaccttcgtaaaa 41624727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 206 - 329
Target Start/End: Original strand, 31272765 - 31272888
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtct 305  Q
    ||||||| ||||||||||||||  | | || ||| |||||||| || ||||||||||||| |||||||||||||| ||| ||||||||||  || |||||    
T  31272765 catgaaggtgtcttttagcaactcatatctcaagatgtgatttccactttttagttataattttgctaaaagacatctttataaaaattagttgttgtct 31272864  T
Q  306 tttagcatatgctcatagaataat 329  Q
    |||| || || |||||||||||||    
T  31272865 tttaacaaatactcatagaataat 31272888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 14041465 - 14041393
Alignment:
Q  237 aaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    |||||||||| | || |||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||    
T  14041465 aaggtgtgatatccactttttagttataactttgttaaaagacaccttcataaaaattaattggtgtttttta 14041393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 40067555 - 40067646
Alignment:
Q  218 ttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    ||||||||||  |||||| ||| |||||||| || ||||||||||||| |||| ||||| ||||||||||||||||||  ||||||||||||    
T  40067555 ttttagcaactcacacctcaagatgtgatttccactttttagttataattttgttaaaatacaccttcataaaaattagttggtgtctttta 40067646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 309
Target Start/End: Complemental strand, 16784489 - 16784393
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| ||| ||||||||||| |||||| |||||||||||| |||||||||||||||||||||||       ||||||||||||||||  |||||||    
T  16784489 ccatgaaggtgt-ttttagcaacccacacctcaaggtgtgatttccattttttagttataactttgct-------accttcataaaaattagttggtgtc 16784398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 1983481 - 1983558
Alignment:
Q  218 ttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    ||||||||| |||||| | || ||||||||||||  ||||||||||| |||||||||||||||| |||||||||||||    
T  1983481 ttttagcaatctacacatcaatgtgtgattttcacattttagttatagctttgctaaaagacactttcataaaaatta 1983558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 291
Target Start/End: Original strand, 39589976 - 39590014
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaa 291  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39589976 tttttagttataactttgctaaaagacaccttcataaaa 39590014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 44508892 - 44508955
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataa 265  Q
    ||||||||||| ||||||||||||||  | |||| |||||||||||||||  ||||||||||||    
T  44508892 cacccatgaaggtgtcttttagcaactcatacctcaaggtgtgattttcaccttttagttataa 44508955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 291
Target Start/End: Complemental strand, 39077200 - 39077162
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  39077200 tttttagttataactttgctaaaagacacattcataaaa 39077162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 40067469 - 40067530
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttat 263  Q
    ||||||||||| |||||||||| |||| ||| || |||||||||||| || |||||||||||    
T  40067469 cacccatgaagatgtcttttagtaacccacatctcaaggtgtgatttccactttttagttat 40067530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 41829567 - 41829632
Alignment:
Q  263 taactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataa 328  Q
    |||||||| ||||||||| ||||||||||||||  | |||||||||| || ||| |||||||||||    
T  41829567 taactttgttaaaagacatcttcataaaaattagtttgtgtcttttaacaaatgttcatagaataa 41829632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 312
Target Start/End: Original strand, 13326964 - 13327027
Alignment:
Q  248 ttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagca 312  Q
    |||| |||||||||||||||| | ||||||||| ||||||||||||||  ||| |||||||||||    
T  13326964 ttcactttttagttataactt-gataaaagacaacttcataaaaattagttggcgtcttttagca 13327027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 1201727 - 1201640
Alignment:
Q  209 gaagttgtcttttagcaacctacaccttaaggtgtgattttcat-tttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    |||| ||| |||||||||| | ||| |||||||||  ||| ||  |||||||||||| ||||||||||| ||||||| ||||||||||    
T  1201727 gaaggtgtgttttagcaacattcactttaaggtgtattttacaactttttagttatatctttgctaaaacacaccttaataaaaatta 1201640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 291
Target Start/End: Complemental strand, 40301409 - 40301372
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaa 291  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  40301409 tttttagttataactt-gctaaaagacaccttcataaaa 40301372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 1271044 - 1271116
Alignment:
Q  237 aaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    ||||||||||| || | |||||| ||||||||| | ||||||||||||||||||||||||  |||||| |||||    
T  1271044 aaggtgtgattatccactttttaattataactt-gttaaaagacaccttcataaaaattagttggtgtatttta 1271116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 287
Target Start/End: Complemental strand, 42556979 - 42556946
Alignment:
Q  254 ttttagttataactttgctaaaagacaccttcat 287  Q
    |||||||||||| |||||||||||||||||||||    
T  42556979 ttttagttataattttgctaaaagacaccttcat 42556946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 9548194 - 9548320
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| |||||| ||| |||||||| || |||||||||||||||| ||||||||||||||||||||||||||  ||||    
T  9548194 cacccatgaaggtgtcttttagcaacccacacctcaagatgtgatttccactttttagttataacttcgctaaaagacaccttcataaaaattagttggt 9548293  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||||| |||||||||||||||    
T  9548294 gtcttttagcaaatgctcatagaataa 9548320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 10664675 - 10664801
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    |||| |||||| |||||||||| |||| |||||| |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||  ||||    
T  10664675 caccgatgaaggtgtcttttagtaacccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacgccttcataaaaattagttggt 10664774  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||||| |||||||||||||||    
T  10664775 gtcttttagcaaatgctcatagaataa 10664801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 12725701 - 12725827
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||  | |||||| || ||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||    
T  12725701 cacccatgaaggtgtcttttagcaggccacacctcaaagtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggt 12725800  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||| | |||||||||||||||    
T  12725801 gtcttttagtaaatgctcatagaataa 12725827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 18924523 - 18924649
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| | |||| |||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||  ||||    
T  18924523 cacccatgaaggtgtcttttagcaacccatacctcaaggtgtgatttccactttttagttataactttgctaaaggacaccttcataaaaattagttggt 18924622  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || ||| |||||||||||    
T  18924623 gtcttttaacaaatgttcatagaataa 18924649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 29471618 - 29471744
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||| | |||||| |||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||  | ||    
T  29471618 cacccatgaaggtgtcttttagcaatccacacctcaaggagtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagtttgt 29471717  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||||| ||| |||||||||||    
T  29471718 gtcttttagcaaatgttcatagaataa 29471744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 42090556 - 42090457
Alignment:
Q  230 acaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataat 329  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| || ||| ||||||||||||    
T  42090556 acaccttaagatgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataat 42090457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 204 - 329
Target Start/End: Complemental strand, 24314382 - 24314257
Alignment:
Q  204 cccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgt 303  Q
    ||||||||| |||||||||||||   |||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  24314382 cccatgaaggtgtcttttagcaattcacacctcaaggtgtgatttccacattttagttataactttgctaaaagacaccttcataaaaattagttggtgt 24314283  T
Q  304 cttttagcatatgctcatagaataat 329  Q
    |||||| || ||||||||| ||||||    
T  24314282 cttttaacaaatgctcataaaataat 24314257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 328
Target Start/End: Complemental strand, 12895495 - 12895372
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| ||||||||||||| | |||||| ||| ||||||||||| |||||||||||| | ||| ||||||||||||||||||||||||  |||||||    
T  12895495 ccatgaaggtgtcttttagcaatccacacctcaagatgtgattttcactttttagttatagcattgttaaaagacaccttcataaaaattagttggtgtc 12895396  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    ||||| || |||||||||||||||    
T  12895395 ttttaacaaatgctcatagaataa 12895372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 328
Target Start/End: Complemental strand, 21950806 - 21950683
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||  ||||||||||||||| |||||| ||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||  ||||||     
T  21950806 ccatgaaagtgtcttttagcaacccacacctcaaggtatgattttcactttttagttataactttgctaaaagacacattcataaatattagttggtgtt 21950707  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    ||||| || |||||||||||||||    
T  21950706 ttttaacaaatgctcatagaataa 21950683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 205 - 328
Target Start/End: Original strand, 1749903 - 1750028
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacac--cttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtg 302  Q
    |||||||| ||| ||||||||||||||||  || ||||||| |||| || ||||||||||||| |||||||||||||||||||||||||||||  |||||    
T  1749903 ccatgaaggtgttttttagcaacctacacacctcaaggtgtaatttccactttttagttataattttgctaaaagacaccttcataaaaattagttggtg 1750002  T
Q  303 tcttttagcatatgctcatagaataa 328  Q
    ||||||| || ||||| |||||||||    
T  1750003 tcttttaacaaatgctaatagaataa 1750028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 206 - 328
Target Start/End: Original strand, 39089091 - 39089213
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtct 305  Q
    ||||||| ||| ||||||||| | |||||| ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  39089091 catgaaggtgttttttagcaatccacacctcaaggtatgatttccattttttagttataactttgctaaaagacatcttcataaaaattagttggtgtct 39089190  T
Q  306 tttagcatatgctcatagaataa 328  Q
    |||| || ||| | |||||||||    
T  39089191 tttaacaaatgttaatagaataa 39089213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 10862684 - 10862595
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||||| || ||||||||||||| |||||||||||||||||||||||||    
T  10862684 cacccatgaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataattttgctaaaagacaccttcataaaa 10862595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 34450420 - 34450334
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    |||||||| ||||||||||||||| |||||| |||||||||||| || |||||| ||||||||||||||||||||||||||||||||    
T  34450420 ccatgaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttatttataactttgctaaaagacaccttcataaaa 34450334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 214 - 291
Target Start/End: Original strand, 14747354 - 14747431
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||    
T  14747354 tgtcttttagcaacccacaccttaaggtgtgattttcattttttaattataattttgccaaaagacaccttcataaaa 14747431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 44539843 - 44539934
Alignment:
Q  218 ttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    ||||||||| | ||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||  |||| |||||||    
T  44539843 ttttagcaagccacaccttaaggtgtgatatccattttttagttataactttgctaaaatacaccttcataaaaattagttggtatctttta 44539934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 6231328 - 6231240
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaa 290  Q
    ||||||||||  ||| ||||||||||  |||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6231328 cacccatgaatgtgttttttagcaactcacattttaaggtgtgattttcactttttagttataactttgctaaaagacaccttcataaa 6231240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 36779792 - 36779879
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttca--ttttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||||||||||||| |||||||| || ||||||||| ||  ||||||||||| ||||||||||||||||||||||||||||    
T  36779792 catgaagttgtcttttagcaatctacacctcaatgtgtgatttccactttttttagttaaaactttgctaaaagacaccttcataaaa 36779879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 27097141 - 27097052
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||| |||||||| |||||| |||||| |||||||||||| || ||||||||||||||||| |||||  ||||||||||||||    
T  27097141 cacccatgaaggtgtcttttggcaacccacacctcaaggtgtgatttccactttttagttataactttcctaaataacaccttcataaaa 27097052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 29511697 - 29511788
Alignment:
Q  104 ttgaataatagaaagagataaaaataaggttgtcacaagagttgttgattttacaaatatcaatactcttcttaaaagggtggactctttcac 196  Q
    |||||||||||||||||||||||| ||| || ||| | || | ||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  29511697 ttgaataatagaaagagataaaaagaag-ttatcatatgaatagttgattttacaaatatcattactctttttaaaagggtggactctttcac 29511788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 312
Target Start/End: Complemental strand, 4206590 - 4206492
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgatt-ttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagca 312  Q
    ||||||||||||| | |||||||||||||||||| | || |||||||||||||| |||||||||||||| |||||||||||||  |||| ||| ||||||    
T  4206590 tgtcttttagcaagccacaccttaaggtgtgattatccactttttagttataac-ttgctaaaagacacattcataaaaattagttggtttctgttagca 4206492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 16719710 - 16719818
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcatttttt-agttataactttgctaaaagacaccttcataaaaattaaatgg 300  Q
    ||||||||||| |||||||||||||   ||| || | | ||||||||| ||||||| ||| |||||||| |||||||||||||||||||||||||  | |    
T  16719710 cacccatgaagatgtcttttagcaattcacatctcaggctgtgatttttatttttttagtgataactttactaaaagacaccttcataaaaattagtttg 16719809  T
Q  301 tgtctttta 309  Q
    |||||||||    
T  16719810 tgtctttta 16719818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 2969684 - 2969739
Alignment:
Q  254 ttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||| |||||||    
T  2969684 ttttagttataactttgctaaaagacaccttcataaaaattagttggtatctttta 2969739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 291
Target Start/End: Original strand, 27175468 - 27175545
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||||| | |||||| ||||||||||| || | |||||||||||||||| ||||||||||||||||||||||    
T  27175468 tgtcttttagcaagcaacacctcaaggtgtgattatccactttttagttataactt-gctaaaagacaccttcataaaa 27175545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 33740366 - 33740297
Alignment:
Q  240 gtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    ||||||| |||| ||| ||||||||||||||||||||||||| || ||||||||||  ||||||||||||    
T  33740366 gtgtgatattcactttctagttataactttgctaaaagacacatttataaaaattagttggtgtctttta 33740297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 321
Target Start/End: Original strand, 5534276 - 5534392
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| | | |||||| || | |||||| ||| ||||||||  | |||||| ||||||||||||||||| | ||||||||||||||||| |||| |     
T  5534276 ccatgaaggtattttttagtaatccacacctcaagatgtgatttcaactttttaattataactttgctaaaaaataccttcataaaaattaattggtatt 5534375  T
Q  305 ttttagcatatgctcat 321  Q
    ||||| || ||||||||    
T  5534376 ttttaacaaatgctcat 5534392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 295
Target Start/End: Complemental strand, 2969673 - 2969636
Alignment:
Q  258 agttataactttgctaaaagacaccttcataaaaatta 295  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2969673 agttataactttgctaaaagacaccttcataaaaatta 2969636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 29511834 - 29511911
Alignment:
Q  215 gtcttttagcaacctacaccttaaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||||   |||||| |||||||| || || | ||||||||||||| |||||||||||||||||||||||||    
T  29511834 gtcttttagcaagtcacacctcaaggtgtgcttatccactttttagttataattttgctaaaagacaccttcataaaa 29511911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 295
Target Start/End: Original strand, 34125539 - 34125625
Alignment:
Q  209 gaagttgtcttttagcaacctacaccttaaggtgtgattttcat-tttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    |||| ||||||||||||| | |||||| ||||||||||| |||  ||||||||||||  || |||||||||||| |||||||||||||    
T  34125539 gaaggtgtcttttagcaatccacacctcaaggtgtgattatcaactttttagttataggtt-gctaaaagacacattcataaaaatta 34125625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 29512259 - 29512303
Alignment:
Q  251 attttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||    
T  29512259 attttttagttatatctttgctaaaacacaccttaataaaaatta 29512303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 5601764 - 5601710
Alignment:
Q  237 aaggtgtgattttcat-tttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||||||||||    
T  5601764 aaggtgtgattatcaactttttagttataa-tttgctaaaagacaccttcataaaa 5601710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 295
Target Start/End: Original strand, 39961525 - 39961615
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    |||||||| ||||||||||||| | |||||| || || ||||| || | ||||||||||||| |||| |||||||||||||| | |||||||    
T  39961525 ccatgaaggtgtcttttagcaatccacacctcaaagtatgattatcaactttttagttataa-tttgataaaagacaccttcgtgaaaatta 39961615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 25880737 - 25880656
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcat-tttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    ||||||| ||||| | |||||| || |||||||| |||  |||||||||||||||| | ||||| ||||||||||||||||||    
T  25880737 tgtctttcagcaatccacacctcaaagtgtgattatcaactttttagttataactt-gttaaaaaacaccttcataaaaatta 25880656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 206 - 328
Target Start/End: Original strand, 43939443 - 43939565
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtct 305  Q
    ||||||| ||||||||||||| | |||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||||||||    
T  43939443 catgaaggtgtcttttagcaatccacacctcaaggtgtgattttcactttttagttataattttgttaaaagacaccttcataaaaattaattggtgtct 43939542  T
Q  306 tttagcatatgctcatagaataa 328  Q
    |||| || |||||||||||||||    
T  43939543 tttaacaaatgctcatagaataa 43939565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 206 - 328
Target Start/End: Original strand, 1838651 - 1838774
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataacttt-gctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    ||||||| ||||||||||||||| |||||| || ||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  1838651 catgaaggtgtcttttagcaacccacacctcaatgtgtgatttccactttttagttataacttttgctaaaagacaccttcataaaaattagttggtgtc 1838750  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    |||||||| |||||||||||||||    
T  1838751 ttttagcaaatgctcatagaataa 1838774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 202 - 329
Target Start/End: Original strand, 24992852 - 24992979
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||  ||||    
T  24992852 cacccatgaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataactttgttaaaagacaccttcataaaaattagttggt 24992951  T
Q  302 gtcttttagcatatgctcatagaataat 329  Q
    |||||||| || ||||| ||| ||||||    
T  24992952 gtcttttaacaaatgctaatataataat 24992979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 30414089 - 30414215
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||| ||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  30414089 cacccatgaaggtgtcttttagcaacccacatctcaaggtgttatttccattttttagttataactttgctaaaagacaccttcataaaaattagttggt 30414188  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || ||||| ||| |||||    
T  30414189 gtcttttaacaaatgctaatataataa 30414215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 205 - 328
Target Start/End: Complemental strand, 14463486 - 14463363
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| ||||||||| ||| | ||| ||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||  | |||||    
T  14463486 ccatgaaggtgtcttttaacaatccacatcttaatgtgtgattttcattttttacttataactttgttaaaagacaccttcataaaaattagttagtgtc 14463387  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    |||||||| |||||||||||||||    
T  14463386 ttttagcaaatgctcatagaataa 14463363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 1627662 - 1627787
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| |||||||||| |||| |||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||| || | | ||    
T  1627662 cacccatgaaggtgtcttttagtaacccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaagtt-agttgt 1627760  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||||| ||| |||||||||||    
T  1627761 gtcttttagcaaatgttcatagaataa 1627787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 8549549 - 8549675
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    |||| |||||| ||| ||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||  | ||    
T  8549549 cacctatgaaggtgtattttagcaatccacacctcaaggtgtgattttcactttttagttataactttgctaaaaaacaccttcataaaaattagttagt 8549648  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    |||||||| || ||||| |||||||||    
T  8549649 gtcttttaacaaatgctaatagaataa 8549675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 25670969 - 25671090
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| |||||||||||||||  |||||||     | ||||||| |||||||||||||||||| ||||||||||||||||||||||||  ||||    
T  25670969 cacccatgaaggtgtcttttagcaacccgcacctta-----taattttcactttttagttataactttgttaaaagacaccttcataaaaattagttggt 25671063  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||||| |||||||||||||||    
T  25671064 gtcttttagcaaatgctcatagaataa 25671090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 312
Target Start/End: Complemental strand, 26897422 - 26897313
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| || |||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||| ||| ||||||||||||||  ||||    
T  26897422 cacccatgaaggtgacttttagcaacc-acaccttaaggtgtgatttccactttttagttataactttgctaaaaaacatcttcataaaaattagttggt 26897324  T
Q  302 gtcttttagca 312  Q
    |||||||||||    
T  26897323 gtcttttagca 26897313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 205 - 328
Target Start/End: Original strand, 25825288 - 25825411
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| ||||||||||||||| |||||| |||||||||||| || |||||||||||||||||||| |||| ||||| |||||||||||  | |||||    
T  25825288 ccatgaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataactttgctgaaaggcacctccataaaaattagtttgtgtc 25825387  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    ||||| || ||||||||| |||||    
T  25825388 ttttaacaaatgctcataaaataa 25825411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 10769756 - 10769882
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| || ||| |||||| | |||||| |||||||||||| || |||||||||||||||| | |||||| |||||||||||||||||  ||||    
T  10769756 cacccatgaaggtgccttatagcaatccacacctgaaggtgtgatttccactttttagttataacttggataaaaggcaccttcataaaaattagttggt 10769855  T
Q  302 gtcttttagcatatgctcatagaataa 328  Q
    ||||||||||| ||||| |||||||||    
T  10769856 gtcttttagcaaatgcttatagaataa 10769882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 207 - 328
Target Start/End: Complemental strand, 44720229 - 44720109
Alignment:
Q  207 atgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctt 306  Q
    |||||| ||||||||||||||  |||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||  || ||||||    
T  44720229 atgaaggtgtcttttagcaactcacaccttaaggtgtgattttcactttttagttataactttgttaaaagacacc-tcataaaaattagttgatgtctt 44720131  T
Q  307 ttagcatatgctcatagaataa 328  Q
    ||| ||  |||| |||||||||    
T  44720130 ttaccaattgctaatagaataa 44720109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 214 - 328
Target Start/End: Original strand, 2964861 - 2964975
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcat 313  Q
    ||||||||||||| | ||| || ||||||| |||| || ||||||||||||| |||||| ||||||||||||||||||||||  |||||||||||||||     
T  2964861 tgtcttttagcaatccacatctcaaggtgtcatttccactttttagttataattttgcttaaagacaccttcataaaaattagttggtgtcttttagcaa 2964960  T
Q  314 atgctcatagaataa 328  Q
    ||| |||||||||||    
T  2964961 atgttcatagaataa 2964975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 7336086 - 7336172
Alignment:
Q  243 tgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataat 329  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||| ||||| ||||    
T  7336086 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattaattggtgtcttttaacaaatgcttatagagtaat 7336172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 202 - 287
Target Start/End: Original strand, 26284494 - 26284579
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcat 287  Q
    ||||||||||| ||||||||| ||| | |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26284494 cacccatgaagatgtcttttaacaatccacacctcaaggtgtgattttcactttttagttataactttgctaaaagacaccttcat 26284579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 213 - 328
Target Start/End: Complemental strand, 42470915 - 42470800
Alignment:
Q  213 ttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagca 312  Q
    |||||||||||||||  |||||| || || |  |||||| |||||| |||||| |||| ||||||||||||||||||||||||  |||||||||||||||    
T  42470915 ttgtcttttagcaactcacacctcaatgtatacttttcactttttaattataattttgttaaaagacaccttcataaaaattagttggtgtcttttagca 42470816  T
Q  313 tatgctcatagaataa 328  Q
     |||||||||||||||    
T  42470815 aatgctcatagaataa 42470800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 1469682 - 1469771
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||  ||||||||||||||| |||||| |||||||||||| || |||||||||||| |||| |||||||||||||||||||||    
T  1469682 cacccatgaatgtgtcttttagcaacccacacctcaaggtgtgatttccactttttagttatagcttttctaaaagacaccttcataaaa 1469771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 26842918 - 26842829
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||| |||  |||||||||||||| |||||| || ||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  26842918 cacccataaaggcgtcttttagcaacccacacctcaatgtgtgatttccattttttagttataactttgctaaaagacactttcataaaa 26842829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 49660453 - 49660364
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    ||||||| ||||||||||||||  |||||| ||| |||||||| || |||||||||||||||||| ||||||||||||||||||||||||    
T  49660453 catgaaggtgtcttttagcaactcacacctcaagttgtgatttccactttttagttataactttgttaaaagacaccttcataaaaatta 49660364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 206 - 329
Target Start/End: Complemental strand, 1406875 - 1406752
Alignment:
Q  206 catgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtct 305  Q
    ||||||| ||| ||||| ||||  ||| || || ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||   |||||||    
T  1406875 catgaaggtgttttttaacaactcacatctcaaagtgtgatttccactttttagttataactttgctaaaagacaccttcacaaaaattagtcggtgtct 1406776  T
Q  306 tttagcatatgctcatagaataat 329  Q
    |||| || ||| ||||||||||||    
T  1406775 tttaccaaatgttcatagaataat 1406752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 40461139 - 40461025
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcat 313  Q
    ||||||||| ||||| |||| ||||| |||||||| || ||||||||||||||||| |||||||| || |||||||||||||  |||||||||||| ||     
T  40461139 tgtcttttaccaacccacactttaagatgtgatttccactttttagttataactttactaaaagatactttcataaaaattacttggtgtcttttaacaa 40461040  T
Q  314 atgctcatagaataa 328  Q
    ||| ||||| |||||    
T  40461039 atgttcatataataa 40461025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 9005596 - 9005472
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaag--acaccttcataaaaattaaatg 299  Q
    ||||||||||  ||||||||||||| |  ||||| ||||||||||||||| ||||||||||||| |||||||||||  ||||||||||| ||||||        
T  9005596 cacccatgaatatgtcttttagcaatccgcacctcaaggtgtgattttcactttttagttataattttgctaaaagacacaccttcatagaaatta---- 9005501  T
Q  300 gtgtcttttagcatatgctcatagaataa 328  Q
    |||||||||| || ||||| |||||||||    
T  9005500 gtgtcttttaacaaatgctgatagaataa 9005472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 17168313 - 17168199
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttca-ttttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagca 312  Q
    ||||||||| ||| | |||||| ||  ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  17168313 tgtcttttaacaatccacacctcaaaatgtgattatcaattttttagttataactt-gctaaaagacaccttcataaaaattaactagtgtcttttagca 17168215  T
Q  313 tatgctcatagaataa 328  Q
     ||||  |||||||||    
T  17168214 aatgcatatagaataa 17168199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 4105661 - 4105587
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcata 288  Q
    |||||||||||||   | ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4105661 tgtcttttagcaattcataccttaatgtgtgattttcactttttagttataactttgctaaaagacaccttcata 4105587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 295
Target Start/End: Complemental strand, 42470667 - 42470577
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    |||||||| |||||||||||||   |||||| |||||||||||| || |||||||||||||||||| ||||||| || |||||||||||||    
T  42470667 ccatgaaggtgtcttttagcaattcacacctcaaggtgtgatttccactttttagttataactttgttaaaagatacattcataaaaatta 42470577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 15661119 - 15661192
Alignment:
Q  255 tttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataa 328  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||| || ||||| ||| |||||    
T  15661119 tttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgcttataaaataa 15661192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 204 - 328
Target Start/End: Complemental strand, 5226967 - 5226843
Alignment:
Q  204 cccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgt 303  Q
    |||||||| |||||||||||||| | | || ||| |||||||||| || ||||| |||||| ||||| ||||| ||||||||||||||||||  ||||||    
T  5226967 cccatgaatttgtcttttagcaatccaaacattagggtgtgatttccactttttggttatatctttgttaaaacacaccttcataaaaattagttggtgt 5226868  T
Q  304 cttttagcatatgctcatagaataa 328  Q
     ||||| || || |||||| |||||    
T  5226867 tttttaacaaatactcatataataa 5226843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 47921679 - 47921623
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttta 309  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  47921679 tttttagttataactttgctaaaagacaccttcataaaaattaattggtatctttta 47921623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 327
Target Start/End: Original strand, 17452945 - 17453008
Alignment:
Q  264 aactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaata 327  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||    
T  17452945 aactttgctaaaagacaccttcacaaaaattagttggtgtcttttagcaaatgctcatagaata 17453008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 328
Target Start/End: Original strand, 26213698 - 26213812
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcat 313  Q
    ||||||||||||||| |||||| ||| ||||| | ||| |||||| ||||||||||| |||||||||| || ||||| ||||  || ||| ||||| ||     
T  26213698 tgtcttttagcaaccgacacctcaagctgtgactctcactttttaattataactttgttaaaagacacatttataaatattagttgatgttttttaacaa 26213797  T
Q  314 atgctcatagaataa 328  Q
    |||||||||||||||    
T  26213798 atgctcatagaataa 26213812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 291
Target Start/End: Original strand, 2752655 - 2752732
Alignment:
Q  214 tgtcttttagcaacctacaccttaaggtgtgattttca-ttttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||||| | |||||| ||||||| ||| ||| ||||||||||||||| ||||||||||||| | ||||||||    
T  2752655 tgtcttttagcaatccacacctcaaggtgtaattatcagttttttagttataac-ttgctaaaagacagcctcataaaa 2752732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 15660863 - 15660912
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttca 251  Q
    ||||||||||| ||||||||||||||| |||||| || ||||||||||||    
T  15660863 cacccatgaaggtgtcttttagcaacccacacctcaaagtgtgattttca 15660912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 30819571 - 30819615
Alignment:
Q  273 aaaagacaccttcataaaaattaaatggtgtcttttagcatatgc 317  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||    
T  30819571 aaaagacaccttcataaaaattagttggtgtcttttagcaaatgc 30819615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 20201711 - 20201672
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaa 292  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  20201711 tttttagttatatctttgctaaaagacaccttaataaaaa 20201672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 3273482 - 3273556
Alignment:
Q  219 tttagcaacctacaccttaaggtgtgattttc-attttttagttataactttgctaaaagacaccttcataaaaa 292  Q
    ||||||||| | |||||||||||||  ||  | |||||||||||||| ||||||||||| ||||||| |||||||    
T  3273482 tttagcaacatccaccttaaggtgtatttaacaattttttagttatatctttgctaaaacacaccttaataaaaa 3273556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 16005749 - 16005791
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||    
T  16005749 tttttagttatatctttgctaaaacacaccttaataaaaatta 16005791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 28454889 - 28454931
Alignment:
Q  253 tttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||    
T  28454889 tttttagttatatctttgctaaaacacaccttaataaaaatta 28454931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 48875094 - 48875160
Alignment:
Q  203 acccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataacttt 269  Q
    |||||| ||| | ||||||||||||| |||||| ||| ||||||||  | |||||||||||||||||    
T  48875094 acccataaaggtttcttttagcaacccacacctcaagttgtgatttctactttttagttataacttt 48875160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 10835664 - 10835608
Alignment:
Q  255 tttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagca 312  Q
    ||||||||||| ||||||| || |||| |||||||||||||  |||||||||||||||    
T  10835664 tttagttataa-tttgctagaacacactttcataaaaattagttggtgtcttttagca 10835608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 13264775 - 13264734
Alignment:
Q  251 attttttagttataactttgctaaaagacaccttcataaaaa 292  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  13264775 attttttagttatatctttgctaaaacacaccttaataaaaa 13264734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 284
Target Start/End: Original strand, 38509637 - 38509713
Alignment:
Q  208 tgaagttgtcttttagcaacctacaccttaaggtgtgatt-ttcattttttagttataactttgctaaaagacacctt 284  Q
    ||||| ||||||||||||| |||||||| || |||||||| | || ||||||||||||||  || |||||||||||||    
T  38509637 tgaaggtgtcttttagcaatctacacctcaatgtgtgattatccactttttagttataac-atgataaaagacacctt 38509713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 28764562 - 28764519
Alignment:
Q  251 attttttagttataactttgctaaaagacaccttcataaaaatta 295  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||    
T  28764562 attttttagttatatctttgctaaaa-acaccttaataaaaatta 28764519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 205 - 328
Target Start/End: Original strand, 94799 - 94921
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| ||||||||||||||| |||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  94799 ccatgaaggtgtcttttagcaacccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtc 94898  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    ||||| || || ||||||||||||    
T  94899 ttttaacaaat-ctcatagaataa 94921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 243 - 328
Target Start/End: Complemental strand, 478438 - 478353
Alignment:
Q  243 tgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataa 328  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||| || ||| |||||||||||    
T  478438 tgattttcactttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataa 478353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 209 - 328
Target Start/End: Complemental strand, 392568 - 392449
Alignment:
Q  209 gaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtctttt 308  Q
    |||| ||||||||||||||| ||||||||||||||||||| || ||||||||||||  ||||||||||||||||||||||| |||||  |||||||||||    
T  392568 gaaggtgtcttttagcaacccacaccttaaggtgtgatttccactttttagttatacatttgctaaaagacaccttcataataattagttggtgtctttt 392469  T
Q  309 agcatatgctcatagaataa 328  Q
    |||| |||||||||||||||    
T  392468 agcaaatgctcatagaataa 392449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 219 - 328
Target Start/End: Complemental strand, 35206 - 35097
Alignment:
Q  219 tttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgct 318  Q
    |||||||| | |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||| |||||    
T  35206 tttagcaatccacacctcaaggtgtgattttcactttttagttataactttgctaaaagacaccttcataaaaattagtcggtgtctcttagcaaatgct 35107  T
Q  319 catagaataa 328  Q
    ||||||||||    
T  35106 catagaataa 35097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 205 - 328
Target Start/End: Complemental strand, 9317 - 9195
Alignment:
Q  205 ccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtc 304  Q
    |||||||| |||||||| |||| | |||||| |||||||||||| || ||||||||||||| ||||||||||||||||||||| |||||||  |||| ||    
T  9317 ccatgaaggtgtcttttcgcaatccacacctcaaggtgtgatttccactttttagttataattttgctaaaagacaccttcat-aaaattagttggtatc 9219  T
Q  305 ttttagcatatgctcatagaataa 328  Q
    |||||||| |||||||||||||||    
T  9218 ttttagcaaatgctcatagaataa 9195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 17955 - 17848
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    ||||||||||| ||||||||||||||  || ||| |||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||  || |    
T  17955 cacccatgaaggtgtcttttagcaactcacgcctcaaggtgtgatttccactttttagttataactttgctaaaaaacaccttcataaaaattagttgat 17856  T
Q  302 gtctttta 309  Q
    ||||||||    
T  17855 gtctttta 17848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 237 - 328
Target Start/End: Original strand, 121655 - 121746
Alignment:
Q  237 aaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataa 328  Q
    |||||||||||| || ||||||||||||| ||||||||||||| | |||||||||||||| ||||||||||||||| |||||||||||||||    
T  121655 aaggtgtgatttccactttttagttataattttgctaaaagactcattcataaaaattaattggtgtcttttagcaaatgctcatagaataa 121746  T

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Target: scaffold0086 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 8515 - 8604
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    ||||||||||| ||||||||||||| | |||||| |||||||||||| || |||||||||||||||||| ||||||||| ||||||||||    
T  8515 cacccatgaaggtgtcttttagcaatccacacctgaaggtgtgatttccactttttagttataactttgttaaaagacaacttcataaaa 8604  T

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Target: scaffold0057 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 292
Target Start/End: Complemental strand, 75092 - 75002
Alignment:
Q  202 cacccatgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaa 292  Q
    ||||||||||| ||| ||||||||||| | |||  |||||||||||| || ||||||||||||||||| |||||||||||||| |||||||    
T  75092 cacccatgaaggtgtattttagcaacccataccccaaggtgtgatttccactttttagttataactttactaaaagacaccttaataaaaa 75002  T

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Target: scaffold0091 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 318
Target Start/End: Complemental strand, 3867 - 3771
Alignment:
Q  221 tagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgct 318  Q
    |||||||  |||||| |||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||  |||||||| ||| || |||||    
T  3867 tagcaactcacacctcaaggtgtgatttcctttttttagttataactttgctaaaa-acaccttcataaaaattagttggtgtctattaacaaatgct 3771  T

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Target: scaffold0006 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 231154 - 231243
Alignment:
Q  240 gtgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattaaatggtgtcttttagcatatgctcatagaataat 329  Q
    ||||||||| || |||||| ||||||||||| || |||||||||||||||||||||  |||| ||||||| || ||| ||||||||||||    
T  231154 gtgtgatttccactttttaattataactttgttataagacaccttcataaaaattagttggtatcttttaacaaatgttcatagaataat 231243  T

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Target: scaffold0112 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 291
Target Start/End: Original strand, 35891 - 35975
Alignment:
Q  207 atgaagttgtcttttagcaacctacaccttaaggtgtgattttcattttttagttataactttgctaaaagacaccttcataaaa 291  Q
    |||||| ||| |||||||||   ||||||  ||||||| |||  | ||||||||||||| |||||||||||||||||||||||||    
T  35891 atgaaggtgttttttagcaattaacacctccaggtgtgttttctactttttagttataattttgctaaaagacaccttcataaaa 35975  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 103232 - 103343
Alignment:
Q  202 cacccatgaagttgtctttt-agcaacctacaccttaaggtgtgattttcat-tttttagttataactttgctaaaagacaccttcataaaaattaaatg 299  Q
    ||||||||||| ||| |||| || || | |||||| ||| ||||||| |||  ||||||||||||||||  |||||| |||||||||||||| |||  ||    
T  103232 cacccatgaaggtgtttttttagtaaaccacacctcaagttgtgattatcaactttttagttataacttc-ctaaaaaacaccttcataaaagttagttg 103330  T
Q  300 gtgtcttttagca 312  Q
    |||||||||||||    
T  103331 gtgtcttttagca 103343  T

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Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 88185 - 88245
Alignment:
Q  230 acaccttaaggtgtgattttcat-tttttagttataactttgctaaaagacaccttcataaa 290  Q
    |||||| ||||||||||| |||  ||||||||||||||||  ||||||||||||||||||||    
T  88185 acacctcaaggtgtgattatcaactttttagttataacttc-ctaaaagacaccttcataaa 88245  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 49934 - 49890
Alignment:
Q  257 tagttataactttgctaaaagacaccttcataaaaattaaatggt 301  Q
    |||||||||||||| |||||||||| || ||||||||||| ||||    
T  49934 tagttataactttgttaaaagacacatttataaaaattaattggt 49890  T

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