View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17470_low_4 (Length: 263)
Name: NF17470_low_4
Description: NF17470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17470_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 6066100 - 6066326
Alignment:
| Q |
18 |
atgattaaacaacttcaattgataaaataaaaaatgagaataggataacttaggcaaggttcatcaatcagtgaaattcattatgaaacattaaatagac |
117 |
Q |
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| T |
6066100 |
atgattaaacaatttcaattgataaaataaaaaatgagaataggataacttaggcaaggttcatcaatcagtgaaattcattatgaaacattaaatagac |
6066199 |
T |
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| Q |
118 |
accataaaaatatcaaggcagtgatgctgaaatcaattctaaaatcatactataaactttgcttcttttgaaaaaggaaaagctacaatttacgaagtca |
217 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6066200 |
accataaaaatgtcaaggcagtgatgctgaaatcaattctaaaatcatactataaactttgcttcttttgaaaaaggaaaagctacaatttacgaagtca |
6066299 |
T |
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| Q |
218 |
ctagaacccaaattaacatatggtaaa |
244 |
Q |
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||||||||||||||||||||||||||| |
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| T |
6066300 |
ctagaacccaaattaacatatggtaaa |
6066326 |
T |
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