View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17473_high_30 (Length: 301)

Name: NF17473_high_30
Description: NF17473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17473_high_30
NF17473_high_30
[»] chr3 (39 HSPs)
chr3 (19-165)||(31730781-31730927)
chr3 (228-290)||(31730656-31730718)
chr3 (44-165)||(105906-106027)
chr3 (19-165)||(3457076-3457228)
chr3 (68-135)||(53155325-53155392)
chr3 (29-165)||(53402758-53402900)
chr3 (19-135)||(54706555-54706677)
chr3 (68-135)||(1074789-1074856)
chr3 (68-165)||(48652335-48652432)
chr3 (51-135)||(3961640-3961724)
chr3 (65-165)||(11819220-11819320)
chr3 (68-152)||(19861174-19861258)
chr3 (68-152)||(31462641-31462725)
chr3 (68-123)||(13701896-13701951)
chr3 (19-135)||(31270493-31270615)
chr3 (68-135)||(33637570-33637637)
chr3 (44-135)||(47733748-47733839)
chr3 (68-135)||(55455032-55455099)
chr3 (89-165)||(40401417-40401493)
chr3 (68-135)||(14585629-14585696)
chr3 (68-135)||(22485132-22485199)
chr3 (68-135)||(36624590-36624657)
chr3 (19-123)||(48401041-48401151)
chr3 (68-123)||(48855056-48855111)
chr3 (68-135)||(49627990-49628057)
chr3 (25-135)||(53962285-53962395)
chr3 (29-131)||(32080604-32080712)
chr3 (65-165)||(30156173-30156273)
chr3 (68-119)||(19645374-19645425)
chr3 (80-135)||(35174875-35174930)
chr3 (68-135)||(40883761-40883828)
chr3 (89-124)||(41598381-41598416)
chr3 (44-135)||(48212507-48212598)
chr3 (80-134)||(40013179-40013233)
chr3 (89-131)||(48822245-48822287)
chr3 (46-135)||(2147924-2148012)
chr3 (91-132)||(47272657-47272698)
chr3 (78-134)||(25135216-25135272)
chr3 (68-152)||(36691694-36691778)
[»] chr7 (54 HSPs)
chr7 (19-165)||(6496029-6496175)
chr7 (29-123)||(14657699-14657793)
chr7 (44-152)||(38276994-38277102)
chr7 (44-123)||(21954681-21954760)
chr7 (44-135)||(25112679-25112770)
chr7 (68-165)||(45482201-45482298)
chr7 (29-132)||(4621215-4621318)
chr7 (68-135)||(10094608-10094675)
chr7 (44-135)||(37714646-37714737)
chr7 (68-133)||(39532862-39532927)
chr7 (68-135)||(9719860-9719927)
chr7 (68-135)||(11833185-11833252)
chr7 (68-135)||(21603627-21603694)
chr7 (68-135)||(28664828-28664895)
chr7 (44-135)||(29352393-29352484)
chr7 (228-282)||(6495912-6495966)
chr7 (68-134)||(9785485-9785551)
chr7 (29-135)||(39707452-39707557)
chr7 (71-165)||(48304283-48304377)
chr7 (62-127)||(10623973-10624038)
chr7 (71-152)||(24320113-24320194)
chr7 (68-165)||(42603656-42603753)
chr7 (19-165)||(42644809-42644961)
chr7 (68-165)||(46025916-46026013)
chr7 (68-135)||(1281024-1281091)
chr7 (68-123)||(2622771-2622826)
chr7 (68-123)||(3266565-3266620)
chr7 (68-135)||(24988367-24988434)
chr7 (68-123)||(41288135-41288190)
chr7 (68-123)||(45457443-45457498)
chr7 (89-123)||(4028360-4028394)
chr7 (68-137)||(26161116-26161185)
chr7 (80-165)||(37375930-37376015)
chr7 (68-132)||(40761758-40761822)
chr7 (47-123)||(43256416-43256492)
chr7 (62-121)||(5238134-5238193)
chr7 (68-123)||(5684543-5684598)
chr7 (68-123)||(5709593-5709648)
chr7 (68-123)||(10574560-10574615)
chr7 (68-135)||(17509091-17509158)
chr7 (68-135)||(17544056-17544123)
chr7 (68-135)||(21990829-21990896)
chr7 (89-132)||(22493204-22493247)
chr7 (80-135)||(27050362-27050417)
chr7 (96-135)||(27704985-27705024)
chr7 (68-119)||(32740935-32740986)
chr7 (68-123)||(36253109-36253164)
chr7 (25-134)||(25531620-25531730)
chr7 (68-165)||(6667532-6667629)
chr7 (96-165)||(9137545-9137614)
chr7 (38-135)||(46881346-46881443)
chr7 (31-123)||(9137135-9137227)
chr7 (57-137)||(17223298-17223378)
chr7 (68-120)||(36719439-36719491)
[»] chr4 (57 HSPs)
chr4 (19-135)||(8712697-8712813)
chr4 (29-135)||(5814513-5814619)
chr4 (29-121)||(56236670-56236762)
chr4 (68-165)||(6911817-6911914)
chr4 (19-165)||(13965697-13965849)
chr4 (19-135)||(3159161-3159277)
chr4 (68-165)||(7861093-7861190)
chr4 (68-137)||(22757259-22757328)
chr4 (68-154)||(394161-394247)
chr4 (29-152)||(7060473-7060602)
chr4 (29-135)||(31522113-31522225)
chr4 (68-165)||(53647769-53647866)
chr4 (68-152)||(20887644-20887727)
chr4 (69-165)||(25658304-25658400)
chr4 (68-135)||(13586127-13586194)
chr4 (68-135)||(20399790-20399857)
chr4 (80-135)||(24789356-24789411)
chr4 (80-135)||(24818848-24818903)
chr4 (68-135)||(32616746-32616813)
chr4 (68-135)||(36124235-36124302)
chr4 (44-123)||(40198408-40198487)
chr4 (68-135)||(43244268-43244335)
chr4 (68-165)||(30202175-30202272)
chr4 (80-152)||(2447950-2448022)
chr4 (71-135)||(42197720-42197784)
chr4 (68-135)||(24825816-24825883)
chr4 (68-135)||(27394997-27395064)
chr4 (68-135)||(50801384-50801451)
chr4 (89-135)||(11210221-11210267)
chr4 (69-135)||(38944036-38944102)
chr4 (89-135)||(56062156-56062202)
chr4 (68-165)||(477899-477996)
chr4 (68-165)||(24568600-24568697)
chr4 (68-165)||(39837732-39837829)
chr4 (68-152)||(6882106-6882190)
chr4 (68-120)||(24611687-24611739)
chr4 (68-120)||(26674554-26674606)
chr4 (68-136)||(27090889-27090957)
chr4 (71-135)||(43278101-43278165)
chr4 (68-123)||(626437-626492)
chr4 (68-119)||(7083699-7083750)
chr4 (56-135)||(12716992-12717071)
chr4 (80-123)||(12754342-12754385)
chr4 (29-165)||(19745526-19745668)
chr4 (29-165)||(19794138-19794280)
chr4 (44-123)||(22621610-22621689)
chr4 (68-123)||(24100319-24100374)
chr4 (68-135)||(26742350-26742417)
chr4 (68-123)||(29923014-29923069)
chr4 (68-123)||(51152303-51152358)
chr4 (25-123)||(13169285-13169383)
chr4 (89-135)||(29268685-29268731)
chr4 (80-134)||(43493186-43493240)
chr4 (68-137)||(28837230-28837299)
chr4 (90-131)||(45681836-45681877)
chr4 (44-124)||(6082287-6082367)
chr4 (68-135)||(39523576-39523644)
[»] chr5 (37 HSPs)
chr5 (29-123)||(17687384-17687478)
chr5 (68-135)||(6635415-6635482)
chr5 (68-134)||(7771708-7771774)
chr5 (68-135)||(6281211-6281278)
chr5 (68-134)||(17732273-17732339)
chr5 (25-135)||(25962086-25962196)
chr5 (29-135)||(29097956-29098068)
chr5 (71-135)||(11858077-11858141)
chr5 (80-128)||(35402209-35402257)
chr5 (46-146)||(39915649-39915749)
chr5 (68-135)||(3079221-3079288)
chr5 (19-135)||(11734651-11734773)
chr5 (68-123)||(17096128-17096183)
chr5 (68-135)||(23882003-23882070)
chr5 (68-135)||(33164355-33164422)
chr5 (31-129)||(7150984-7151082)
chr5 (68-165)||(34431197-34431292)
chr5 (29-134)||(39531254-39531363)
chr5 (75-146)||(374438-374509)
chr5 (68-135)||(980916-980983)
chr5 (19-123)||(3740536-3740646)
chr5 (44-152)||(17699703-17699817)
chr5 (68-123)||(20483365-20483420)
chr5 (85-135)||(25487775-25487825)
chr5 (80-153)||(26240577-26240650)
chr5 (62-135)||(32309331-32309404)
chr5 (29-123)||(32347556-32347656)
chr5 (51-124)||(35275856-35275929)
chr5 (68-124)||(42609322-42609378)
chr5 (68-132)||(43494030-43494094)
chr5 (44-123)||(12215312-12215390)
chr5 (68-135)||(17331495-17331562)
chr5 (68-135)||(23428419-23428486)
chr5 (68-155)||(26294944-26295031)
chr5 (77-135)||(39531633-39531691)
chr5 (74-134)||(12891844-12891904)
chr5 (79-135)||(34906320-34906376)
[»] chr6 (29 HSPs)
chr6 (29-165)||(13871468-13871604)
chr6 (19-123)||(15589940-15590050)
chr6 (68-165)||(6296136-6296233)
chr6 (68-165)||(6302946-6303043)
chr6 (19-135)||(8693486-8693608)
chr6 (54-135)||(7076709-7076790)
chr6 (68-135)||(2304725-2304792)
chr6 (68-135)||(31705332-31705399)
chr6 (68-135)||(31937307-31937374)
chr6 (46-120)||(34503768-34503842)
chr6 (68-121)||(23101295-23101348)
chr6 (68-135)||(12481257-12481324)
chr6 (68-135)||(23654417-23654484)
chr6 (68-135)||(35219800-35219867)
chr6 (35-165)||(4921735-4921865)
chr6 (89-165)||(6419766-6419842)
chr6 (68-135)||(1106754-1106821)
chr6 (44-135)||(27135279-27135369)
chr6 (81-135)||(23638020-23638074)
chr6 (62-123)||(3358950-3359011)
chr6 (74-135)||(19402703-19402764)
chr6 (68-136)||(2488303-2488371)
chr6 (70-134)||(4393938-4394002)
chr6 (91-135)||(12342927-12342971)
chr6 (91-135)||(29284920-29284964)
chr6 (44-123)||(12654166-12654245)
chr6 (77-123)||(1915082-1915128)
chr6 (77-126)||(14730798-14730847)
chr6 (89-133)||(15985868-15985912)
[»] chr2 (56 HSPs)
chr2 (31-135)||(5754455-5754559)
chr2 (29-121)||(34471147-34471239)
chr2 (19-165)||(32314579-32314731)
chr2 (29-135)||(36868175-36868287)
chr2 (44-135)||(11798386-11798477)
chr2 (68-135)||(18089284-18089351)
chr2 (44-134)||(6431265-6431355)
chr2 (68-165)||(10286894-10286991)
chr2 (44-137)||(19904673-19904766)
chr2 (68-165)||(28230984-28231081)
chr2 (19-165)||(43473960-43474112)
chr2 (68-152)||(9689872-9689956)
chr2 (51-123)||(20124639-20124711)
chr2 (19-152)||(28261720-28261859)
chr2 (68-135)||(4732237-4732304)
chr2 (88-135)||(6510649-6510696)
chr2 (68-135)||(13740547-13740614)
chr2 (68-123)||(13878896-13878951)
chr2 (68-123)||(14019021-14019076)
chr2 (44-123)||(15920053-15920132)
chr2 (29-165)||(38384299-38384441)
chr2 (68-135)||(44942453-44942520)
chr2 (89-135)||(12994120-12994166)
chr2 (69-135)||(33012215-33012281)
chr2 (19-165)||(7072780-7072932)
chr2 (29-135)||(9978511-9978623)
chr2 (68-137)||(43696033-43696102)
chr2 (68-152)||(22597285-22597369)
chr2 (68-152)||(35333655-35333739)
chr2 (72-135)||(4426549-4426612)
chr2 (68-135)||(4739496-4739563)
chr2 (44-131)||(11426814-11426901)
chr2 (68-123)||(12891005-12891060)
chr2 (29-120)||(17767408-17767499)
chr2 (68-131)||(27095877-27095940)
chr2 (68-135)||(32015420-32015487)
chr2 (86-136)||(8781718-8781768)
chr2 (79-165)||(26254834-26254919)
chr2 (30-121)||(29542974-29543071)
chr2 (25-123)||(45694290-45694388)
chr2 (25-134)||(7581931-7582040)
chr2 (84-165)||(25067989-25068069)
chr2 (51-152)||(27666360-27666461)
chr2 (68-137)||(31908704-31908772)
chr2 (68-152)||(4604194-4604278)
chr2 (89-164)||(6593372-6593450)
chr2 (68-152)||(12704837-12704921)
chr2 (68-120)||(34416650-34416702)
chr2 (60-152)||(38233720-38233812)
chr2 (62-121)||(13548782-13548841)
chr2 (68-135)||(34962963-34963030)
chr2 (44-123)||(36080702-36080781)
chr2 (44-134)||(8531425-8531515)
chr2 (62-136)||(17792640-17792714)
chr2 (68-134)||(20561019-20561085)
chr2 (80-165)||(38535204-38535289)
[»] chr8 (40 HSPs)
chr8 (72-135)||(3204684-3204747)
chr8 (19-135)||(4757332-4757454)
chr8 (19-135)||(37612820-37612942)
chr8 (29-135)||(10334343-10334449)
chr8 (29-123)||(32778813-32778907)
chr8 (65-154)||(10338714-10338803)
chr8 (68-165)||(31202595-31202692)
chr8 (68-165)||(31407643-31407740)
chr8 (44-152)||(13576065-13576173)
chr8 (68-132)||(24700002-24700066)
chr8 (68-136)||(38546048-38546116)
chr8 (68-135)||(43937072-43937139)
chr8 (68-165)||(9501723-9501820)
chr8 (52-152)||(2968682-2968782)
chr8 (29-165)||(7579705-7579847)
chr8 (68-135)||(14600593-14600660)
chr8 (65-135)||(2234362-2234432)
chr8 (65-135)||(37128379-37128449)
chr8 (18-136)||(13570578-13570702)
chr8 (62-123)||(19489008-19489069)
chr8 (68-165)||(41361869-41361966)
chr8 (68-135)||(1810117-1810184)
chr8 (68-135)||(2025119-2025186)
chr8 (68-134)||(28297002-28297068)
chr8 (29-152)||(39067539-39067668)
chr8 (70-135)||(24210408-24210473)
chr8 (29-123)||(24791018-24791118)
chr8 (44-124)||(10952152-10952232)
chr8 (44-124)||(10960157-10960237)
chr8 (19-71)||(15288667-15288719)
chr8 (19-71)||(15469036-15469088)
chr8 (68-123)||(10148124-10148179)
chr8 (68-123)||(11162062-11162117)
chr8 (65-120)||(19720191-19720246)
chr8 (80-135)||(22787659-22787714)
chr8 (80-135)||(30026789-30026844)
chr8 (68-165)||(12329764-12329861)
chr8 (61-134)||(22956446-22956519)
chr8 (80-124)||(20992985-20993029)
chr8 (68-124)||(31308326-31308382)
[»] chr1 (40 HSPs)
chr1 (59-134)||(9298294-9298369)
chr1 (31-106)||(13152636-13152711)
chr1 (68-135)||(33486917-33486984)
chr1 (68-135)||(44517314-44517381)
chr1 (19-153)||(3232937-3233077)
chr1 (68-137)||(4882246-4882315)
chr1 (29-134)||(12871789-12871894)
chr1 (51-135)||(8737517-8737601)
chr1 (68-135)||(14265451-14265518)
chr1 (46-129)||(31427015-31427098)
chr1 (29-123)||(32878887-32878981)
chr1 (28-133)||(3101836-3101941)
chr1 (58-135)||(13999133-13999210)
chr1 (51-123)||(25032958-25033030)
chr1 (19-123)||(7995392-7995502)
chr1 (68-135)||(15391139-15391206)
chr1 (44-135)||(42491060-42491151)
chr1 (65-135)||(27534864-27534934)
chr1 (65-135)||(32784246-32784316)
chr1 (76-133)||(15791170-15791227)
chr1 (29-135)||(45750645-45750757)
chr1 (68-135)||(13488423-13488490)
chr1 (68-135)||(37822233-37822299)
chr1 (68-123)||(51418163-51418218)
chr1 (68-134)||(42276523-42276589)
chr1 (29-134)||(40862667-40862772)
chr1 (89-165)||(10782638-10782714)
chr1 (44-152)||(47551245-47551353)
chr1 (68-155)||(424178-424265)
chr1 (68-135)||(17347764-17347831)
chr1 (68-135)||(18343780-18343846)
chr1 (68-123)||(28678017-28678072)
chr1 (68-134)||(4870920-4870986)
chr1 (89-135)||(20411739-20411785)
chr1 (96-134)||(24114594-24114632)
chr1 (62-152)||(28399210-28399300)
chr1 (29-123)||(29938417-29938510)
chr1 (68-165)||(10627137-10627233)
chr1 (56-121)||(46930276-46930341)
chr1 (51-123)||(29069711-29069783)
[»] scaffold0999 (1 HSPs)
scaffold0999 (31-106)||(1900-1975)
[»] scaffold0121 (1 HSPs)
scaffold0121 (68-165)||(13132-13229)
[»] scaffold0542 (1 HSPs)
scaffold0542 (51-123)||(3961-4033)
[»] scaffold1379 (2 HSPs)
scaffold1379 (29-132)||(931-1034)
scaffold1379 (80-134)||(143-197)
[»] scaffold0536 (1 HSPs)
scaffold0536 (68-123)||(3079-3134)
[»] scaffold1350 (1 HSPs)
scaffold1350 (68-165)||(1711-1808)
[»] scaffold0321 (1 HSPs)
scaffold0321 (29-135)||(6972-7078)
[»] scaffold0056 (1 HSPs)
scaffold0056 (68-122)||(74344-74398)
[»] scaffold0312 (1 HSPs)
scaffold0312 (68-155)||(6284-6371)
[»] scaffold0007 (1 HSPs)
scaffold0007 (57-124)||(201927-201994)
[»] scaffold0432 (1 HSPs)
scaffold0432 (29-83)||(2284-2338)
[»] scaffold0155 (1 HSPs)
scaffold0155 (73-135)||(35251-35313)


Alignment Details
Target: chr3 (Bit Score: 135; Significance: 2e-70; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 31730927 - 31730781
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaat 118  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31730927 atgactatattcatgtctctagatctgcaacattgatgacgccaaagttattgatcggatttgcacttgttcaaagttaatctttcaacttgaatcaaat 31730828  T
Q  119 aaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  31730827 aaacattgcactaagacagtatataaaagacacatcgtacgaagacg 31730781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 31730718 - 31730656
Alignment:
Q  228 ctgaacttacgtcactttccttatctccacctgtctcgtgttctcaatactttaacggccttt 290  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31730718 ctgaacttacctcactttccttatctccaccagtctcgtgttctcaatactttaacggccttt 31730656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 165
Target Start/End: Original strand, 105906 - 106027
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatata 143  Q
    |||||| |||| ||| | ||||| |||||||||||||||| ||| |||||| |||||||||||| |||||||||||||||   ||||||||| | | |||    
T  105906 tgcaacgttgacgacacaaaagtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacacgacactaagacgggaaata 106005  T
Q  144 aaagacacatcgtacgaagacg 165  Q
    ||| |||||||| || ||||||    
T  106006 aaaaacacatcgcacaaagacg 106027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 3457228 - 3457076
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaa------gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    |||||||||||| ||||||| ||| |||||  |||| |||||||||      || |||||||||||||||| ||| |||||| |||||||||||||||||    
T  3457228 atgactatattcttgtctctggatctgcaatgttgacgacgccaaaatcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacttgaa 3457129  T
Q  113 tcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||||||||  | |||||||| | | |||||| ||||| || || ||||||    
T  3457128 tcaaataaacaccgtactaagacgggaaataaaaaacacaccgcacaaagacg 3457076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 53155325 - 53155392
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||||||||||| ||| |||||| |||||||||||| ||||||||||||||| |||||||||||    
T  53155325 attgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgcactaagac 53155392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 53402900 - 53402758
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 122  Q
    |||||||||| ||| |||||| |||| ||||||||||| ||||      |||||||||||| ||| |||||| |||||||||||| ||||||||||||||    
T  53402900 tcatgtctctggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaac 53402801  T
Q  123 attgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |  |||||||||| | | || ||| |||||||| || ||||||    
T  53402800 agcgcactaagacgggaaatcaaaaacacatcgcacaaagacg 53402758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 54706555 - 54706677
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaag------ttattgatcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    |||||||||||||||||||  ||| |||||| |||| ||||||||||      | ||||||||||| |||| ||| |||||| |||||||||||| ||||    
T  54706555 atgactatattcatgtctccggatctgcaacgttgacgacgccaaagccattgtcattgatcggatctgcacttgctcaaaggtaatctttcaacctgaa 54706654  T
Q  113 tcaaataaacattgcactaagac 135  Q
    |||||||||||  ||||||||||    
T  54706655 tcaaataaacaccgcactaagac 54706677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 1074789 - 1074856
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| || | |||||||||    
T  1074789 attgatcggatttgcacttgctcaaagctaatctttcaacttgaatcaaataatcactacactaagac 1074856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 48652335 - 48652432
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||  ||||||||||||||||||||||| | |||||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  48652335 attgatcggatctgctcttgttcaaagttaatctttcaacctaaatcaaataaacaccgcactaagacgggaaataaaaaacacaccgcacaaagacg 48652432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 3961640 - 3961724
Alignment:
Q  51 ttgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||| ||||||||| |||||| | || | |||||| |||||||||||||| |||| |||||||||||||||  ||||||||||    
T  3961640 ttgatggcgccaaagtcattgattgaatctacatttgctcaaagttaatcttacaacctgaatcaaataaacaccgcactaagac 3961724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 165
Target Start/End: Complemental strand, 11819320 - 11819220
Alignment:
Q  65 gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagac 164  Q
    |||||||||||||| |||   ||||||||| |||||||||||| |||||||||||||||  |||||||||| | | |||||| ||||| || || |||||    
T  11819320 gttattgatcggatatgctcctgttcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgggaaataaaaaacacaccgcacaaagac 11819221  T
Q  165 g 165  Q
    |    
T  11819220 g 11819220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 19861174 - 19861258
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 152  Q
    |||||||| || |||| ||| ||||||||||| ||||||| |||||||| |||||||||||||||||| | | |||||| |||||    
T  19861174 attgatcgaatatgcacttgctcaaagttaatatttcaacctgaatcaagtaaacattgcactaagactggaaataaaaaacaca 19861258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 31462641 - 31462725
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 152  Q
    ||||||||||| |||| ||| |||||| |||||||||||| ||||||||||||||   |||||||||| ||| |||||| |||||    
T  31462641 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacgccgcactaagaccgtaaataaaaaacaca 31462725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 13701896 - 13701951
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||    
T  13701896 attgatcagatttgcacttgctcaaagctaatctttcaacttgaatcaaataaaca 13701951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 31270615 - 31270493
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    |||||||||||||||||||  ||| |||||| |||| ||||||||||| ||||      ||||||| | || ||| |||||| |||||||||||| ||||    
T  31270615 atgactatattcatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaacctgaa 31270516  T
Q  113 tcaaataaacattgcactaagac 135  Q
    || ||||||||  ||||||||||    
T  31270515 tcgaataaacaccgcactaagac 31270493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 33637637 - 33637570
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| ||| ||||||||||| |||||||||||| | |||||||||||||  ||||||||||    
T  33637637 attgatcggatctgcttttgttcaaagctaatctttcaacctaaatcaaataaacaccgcactaagac 33637570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 47733748 - 47733839
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||| |||| ||||||||||| |||||| | || |||||||| |||||  |||| ||||||| |||||||||||||||  ||||||||||    
T  47733748 tgcaactttgacgacgccaaagtcattgattgaatatgcatttgctcaaaactaatatttcaacctgaatcaaataaacaccgcactaagac 47733839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 55455099 - 55455032
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  55455099 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 55455032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 40401417 - 40401493
Alignment:
Q  89 tcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| ||||||| ||||||||||||||||||  ||||||| | | |||||| ||||| ||||| ||||||    
T  40401417 tcaaagttaatatttcaacctgaatcaaataaacattgttctaagacggaaaataaaaaacacaccgtacaaagacg 40401493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 14585696 - 14585629
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||| | |||||||||| |||||||||||||||  ||||||||||    
T  14585696 attgatcggatctgcacttgctcaaagctgatctttcaacctgaatcaaataaacaccgcactaagac 14585629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 22485199 - 22485132
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||| ||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  22485199 attgaccggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 22485132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 36624590 - 36624657
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| | |||| |||||||||||| |||||||||||||||  ||||||||||    
T  36624590 attgatcggatctgcacttgcttaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 36624657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 48401151 - 48401041
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    ||||||||||| |||||||  ||| |||||| |||| ||||||||||| ||||      ||||||| |||| ||| |||||| |||||||| ||| ||||    
T  48401151 atgactatatttatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatcttttaacctgaa 48401052  T
Q  113 tcaaataaaca 123  Q
    |||||||||||    
T  48401051 tcaaataaaca 48401041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 48855111 - 48855056
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||    
T  48855111 attgatcggatctgcacttgctcaaagctaatctttcaacatgaatcaaataaaca 48855056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 49627990 - 49628057
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| | |||| |||||||||||| |||||||||||||||  ||||||||||    
T  49627990 attgatcggatctgcacttgctaaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 49628057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 53962395 - 53962285
Alignment:
Q  25 atattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 124  Q
    ||||||||||| | |||| | |||| ||||||| | |||| | | |||| |||| |||| ||| |||||| |||||||| ||| |||||||||||||||     
T  53962395 atattcatgtcccctgatctccaacgttgatgaagtcaaaatcaatgattggatctgcacttgctcaaagctaatcttttaacctgaatcaaataaacac 53962296  T
Q  125 tgcactaagac 135  Q
     ||||||||||    
T  53962295 cgcactaagac 53962285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 32080604 - 32080712
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 122  Q
    |||||||||  ||| |||||| |||||||||||||||| ||||      ||||||| |||  |||||||||| ||||| |||||  ||||||||||||||    
T  32080604 tcatgtctccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctgctcttgttcaaagctaatcattcaagctgaatcaaataaac 32080703  T
Q  123 attgcacta 131  Q
    || ||||||    
T  32080704 atcgcacta 32080712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 165
Target Start/End: Original strand, 30156173 - 30156273
Alignment:
Q  65 gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagac 164  Q
    |||||||||||||| || | ||| |||||| |||| |||||||  ||||||||||||||  |||||||||| | | |||||| ||||| || || |||||    
T  30156173 gttattgatcggatctgaacttgctcaaagctaatttttcaaccagaatcaaataaacaccgcactaagacgggaaataaaaaacacaccgcacaaagac 30156272  T
Q  165 g 165  Q
    |    
T  30156273 g 30156273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 19645425 - 19645374
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaata 119  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||    
T  19645425 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaata 19645374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 35174930 - 35174875
Alignment:
Q  80 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  35174930 tgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 35174875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 40883761 - 40883828
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||  |||||||||||| ||||||||| |||||  ||||||||||    
T  40883761 attgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaagaaacaccgcactaagac 40883828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 124
Target Start/End: Original strand, 41598381 - 41598416
Alignment:
Q  89 tcaaagttaatctttcaacttgaatcaaataaacat 124  Q
    ||||||||||||||||||||| ||||||||||||||    
T  41598381 tcaaagttaatctttcaacttaaatcaaataaacat 41598416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 48212598 - 48212507
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||| |||||  |||||||||| |||||| |||| |||| ||| ||| || ||||| |||||  |||||| |||||||| |||||||||||    
T  48212598 tgcaatattgacaacgccaaagtcattgattggatctgcacttgctcagagctaatccttcaatctgaatctaataaacactgcactaagac 48212507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 40013179 - 40013233
Alignment:
Q  80 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    |||| ||| |||||| |||||||||||| |||||||||||||||  |||||||||    
T  40013179 tgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaaga 40013233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 48822287 - 48822245
Alignment:
Q  89 tcaaagttaatctttcaacttgaatcaaataaacattgcacta 131  Q
    ||||||||||||||||||| | ||||||||||||| |||||||    
T  48822287 tcaaagttaatctttcaaccttaatcaaataaacactgcacta 48822245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 135
Target Start/End: Complemental strand, 2148012 - 2147924
Alignment:
Q  46 caacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||| |||||||| | ||||| ||||||| ||| | || ||| |||||| ||||||| ||||| ||||||||||||||  ||||||||||    
T  2148012 caacgttgatgacactaaagtcattgatcagatctacacttgctcaaagataatctt-caactcgaatcaaataaacaccgcactaagac 2147924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 132
Target Start/End: Complemental strand, 47272698 - 47272657
Alignment:
Q  91 aaagttaatctttcaacttgaatcaaataaacattgcactaa 132  Q
    |||||||||| |||||| | ||||||||||||||||||||||    
T  47272698 aaagttaatcattcaaccttaatcaaataaacattgcactaa 47272657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 25135216 - 25135272
Alignment:
Q  78 tttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    |||||| ||| |||||  |||| ||||||||||||||| ||||||| ||||||||||    
T  25135216 tttgcacttgctcaaatctaatatttcaacttgaatcagataaacactgcactaaga 25135272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 36691694 - 36691778
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 152  Q
    |||||||| || |||| |||  |||||||||||||||||| || ||||||||||||  | |||||||| | | |||||| |||||    
T  36691694 attgatcgaatatgcacttgcgcaaagttaatctttcaacctggatcaaataaacaccgtactaagacggaaaataaaaaacaca 36691778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 7e-49; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 6496175 - 6496029
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaat 118  Q
    ||||||||||||||||||||  || ||||||||||| || | |||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||    
T  6496175 atgactatattcatgtctctaaatctgcaacattgacgatgtcaaagttattgatcggatctgcacttgttcaaagttaatctttcaacctgaatcaaat 6496076  T
Q  119 aaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||    
T  6496075 aaacattgcactaagacaatatataaaaaatacatcgtacgaagacg 6496029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 14657699 - 14657793
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||||||  ||| ||||||||||||||||||||||| |||||||| || |||||||| ||||||||||||||||||  |||||||||||||||    
T  14657699 tcatgtctccggatctgcaacattgatgacgccaaagtcattgatcgaatatgcatttgctcaaagttaatctttcaatctgaatcaaataaaca 14657793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 38277102 - 38276994
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatata 143  Q
    |||||| |||| ||||||||||| |||||||||||||| | ||| |||||| |||| ||||||| ||||||||||||||||||||||||||| | | |||    
T  38277102 tgcaacgttgacgacgccaaagtcattgatcggatttgaacttgctcaaagctaatatttcaacatgaatcaaataaacattgcactaagacgggaaata 38277003  T
Q  144 aaagacaca 152  Q
    ||| |||||    
T  38277002 aaaaacaca 38276994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 21954681 - 21954760
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||| |||| ||||||||||| |||||||||||||||| ||| |||||| |||||||||||| |||||||||||||||    
T  21954681 tgcaacgttgacgacgccaaagtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 21954760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 25112770 - 25112679
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| ||   |||||||||||||||||| |||| ||| ||||||||||||||||||||| |||||||||||||| | ||||||||    
T  25112770 tgcaacattgacgatatcaaagttattgatcggatatgcacttgctcaaagttaatctttcaacttaaatcaaataaacatcgtactaagac 25112679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 45482298 - 45482201
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||| |||||||||| | | |||||| |||||||| || ||||||    
T  45482298 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgcactaagacgggaaataaaaaacacatcgcacaaagacg 45482201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 4621215 - 4621318
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 128  Q
    |||||||||  ||| |||||  |||||||| ||||||| ||||||||||| |||| |||||||||  |||||||||||| |||||||||||||||  |||    
T  4621215 tcatgtctccggatctgcaatgttgatgacaccaaagtcattgatcggatctgcacttgttcaaaactaatctttcaacctgaatcaaataaacaccgca 4621314  T
Q  129 ctaa 132  Q
    ||||    
T  4621315 ctaa 4621318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 10094675 - 10094608
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||||||||||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  10094675 attgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 10094608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 37714737 - 37714646
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||| |||| ||||  || ||||||||| | || |||| ||| ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  37714737 tgcaacgttgacgacgtaaatgttattgattgaatctgcacttgatcaaaattaatctttcaacctgaatcaaataaacattgcactaagac 37714646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 39532862 - 39532927
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaag 133  Q
    ||||||||||| |||| ||| |||||| ||||||||||||||||||||||||||||  ||||||||    
T  39532862 attgatcggatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcactaag 39532927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 9719860 - 9719927
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  9719860 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 9719927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 11833252 - 11833185
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  11833252 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 11833185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 21603694 - 21603627
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||  ||||||||||||||||||| |||||||||||||||  ||||||||||    
T  21603694 attgatcggatctgcactttctcaaagttaatctttcaacctgaatcaaataaacaccgcactaagac 21603627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 28664828 - 28664895
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||| ||| |||| ||| |||||| |||||||||||| ||||||||||||||| |||||||||||    
T  28664828 attgatcagatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgcactaagac 28664895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 29352484 - 29352393
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||| |||| ||||| ||||| |||||||| || | || |||  ||||| |||||||||||| |||||||||||||||| ||||||||||    
T  29352484 tgcaacgttgacgacgcaaaagtcattgatcgaatctacacttgcacaaagctaatctttcaacctgaatcaaataaacatcgcactaagac 29352393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 6495966 - 6495912
Alignment:
Q  228 ctgaacttacgtcactttccttatctccacctgtctcgtgttctcaatactttaa 282  Q
    |||||||||||||||||||||||| | ||||| ||| ||||||||||||||||||    
T  6495966 ctgaacttacgtcactttccttatgttcacctctctggtgttctcaatactttaa 6495912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 9785551 - 9785485
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  |||||||||    
T  9785551 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaaga 9785485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 39707557 - 39707452
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 128  Q
    |||||||||  ||| |||||| || |||| | |||||| |||||| |||| |||| ||| |||||||||||  |||||||||||| ||||||||| ||||    
T  39707557 tcatgtctccggatatgcaacgttaatgatgtcaaagtcattgattggatctgcacttgctcaaagttaatacttcaacttgaat-aaataaacactgca 39707459  T
Q  129 ctaagac 135  Q
    |||||||    
T  39707458 ctaagac 39707452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 165
Target Start/End: Original strand, 48304283 - 48304377
Alignment:
Q  71 gatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||   | |||||| ||||| ||||| ||||||    
T  48304283 gatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgagaaataaaaaacacaccgtacaaagacg 48304377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 10624038 - 10623973
Alignment:
Q  62 aaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgc 127  Q
    ||||| |||||| | ||||| | ||| |||||| ||||||||||||||||||||||||||||||||    
T  10624038 aaagtcattgattgaatttgtacttgatcaaagctaatctttcaacttgaatcaaataaacattgc 10623973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 24320113 - 24320194
Alignment:
Q  71 gatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 152  Q
    |||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  |||||||||| | | |||||| |||||    
T  24320113 gatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggaaaataaaaaacaca 24320194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 42603656 - 42603753
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||| ||| | |||| |||||||||||| |||||||||||||||  |||||| ||||| | |||||| ||||| || || ||||||    
T  42603656 attgatcggatatgcacttgcttaaagctaatctttcaacctgaatcaaataaacaccgcactaggacaggaaataaaaaacacagcgcacaaagacg 42603753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 42644961 - 42644809
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaa------gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    |||||||||||||||||||  ||| |||||| |||| |||||||||      || ||||||||||| || | ||| |||||| |||| ||||||| ||||    
T  42644961 atgactatattcatgtctccggatctgcaacgttgacgacgccaaaatcattgtcattgatcggatctgtacttgctcaaagctaatatttcaacctgaa 42644862  T
Q  113 tcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    | |||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  42644861 ttaaataaacaccgcactaagacggaaaataaaaaacacaccgcacaaagacg 42644809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 46025916 - 46026013
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||| ||| |||||| |||||||||||| | |||||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  46025916 attgatcggatctgcacttgctcaaagctaatctttcaacctaaatcaaataaacaccgcactaagacgggaaataaaaaacacaccgcacaaagacg 46026013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 1281024 - 1281091
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||| |||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  1281024 attgttcggatctgcacttgctcaaaggtaatctttcaacctgaatcaaataaacaccgcactaagac 1281091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 2622826 - 2622771
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||| |||| |||| ||| |||||||||||||||||| ||||||||||||||||    
T  2622826 attgattggatctgcacttgctcaaagttaatctttcaatttgaatcaaataaaca 2622771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 3266620 - 3266565
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||    
T  3266620 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 3266565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 24988367 - 24988434
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| | || ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  24988367 attgatcggatctacacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 24988434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 41288190 - 41288135
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||    
T  41288190 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 41288135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 45457443 - 45457498
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||    
T  45457443 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 45457498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 123
Target Start/End: Complemental strand, 4028394 - 4028360
Alignment:
Q  89 tcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||||||||||||||||||||||||||||||||    
T  4028394 tcaaagttaatctttcaacttgaatcaaataaaca 4028360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 26161185 - 26161116
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 137  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||| |||   ||||||||||||    
T  26161185 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaatgaaccccgcactaagacag 26161116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 37375930 - 37376015
Alignment:
Q  80 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||||| |||| |||||||||||||| ||||||||||||||   |||||||||| | | |||||| ||||| || || ||||||    
T  37375930 tgcatttgctcaatgttaatctttcaacctgaatcaaataaactacgcactaagacggaaaataaaaaacacaccgcacaaagacg 37376015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 40761822 - 40761758
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaa 132  Q
    ||||||||||| |||| |||||||||| |||| ||||||| | |||||||||||||  |||||||    
T  40761822 attgatcggatctgcacttgttcaaagctaatatttcaaccttaatcaaataaacaccgcactaa 40761758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 43256416 - 43256492
Alignment:
Q  47 aacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||||| ||||  |||||||||||| | || |||| ||  | ||||||||| |||||||||||||||||||||||    
T  43256416 aacattgacgacgtaaaagttattgatggaatatgcacttaattaaagttaatatttcaacttgaatcaaataaaca 43256492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 5238193 - 5238134
Alignment:
Q  62 aaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaa 121  Q
    ||||| |||||| | || |||||||| | ||||||||||||||||| |||||||||||||    
T  5238193 aaagtcattgattgaatctgcatttggttaaagttaatctttcaacctgaatcaaataaa 5238134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 5684598 - 5684543
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| ||| |||||| |||||||||||| ||||||||| |||||    
T  5684598 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaaca 5684543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 5709648 - 5709593
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| ||| |||||| |||||||||||| ||||||||| |||||    
T  5709648 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaaca 5709593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 10574615 - 10574560
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||    
T  10574615 attgatcggatctgcacttgctcaaaactaatctttcaacatgaatcaaataaaca 10574560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 17509091 - 17509158
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||  |||||||||||| ||||| |||||||||  ||||||||||    
T  17509091 attgatcggatctgcacttgctcaaaactaatctttcaacctgaattaaataaacaccgcactaagac 17509158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 17544123 - 17544056
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||  |||||||||||| ||||| |||||||||  ||||||||||    
T  17544123 attgatcggatctgcacttgctcaaaactaatctttcaacctgaattaaataaacaccgcactaagac 17544056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 21990896 - 21990829
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||||||  ||| ||| |||||| |||||||||||  |||||||||||||||  ||||||||||    
T  21990896 attgatcggatcagcacttgctcaaagctaatctttcaagctgaatcaaataaacaccgcactaagac 21990829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 22493247 - 22493204
Alignment:
Q  89 tcaaagttaatctttcaacttgaatcaaataaacattgcactaa 132  Q
    ||||||||||||||||||| ||||||||||||| || |||||||    
T  22493247 tcaaagttaatctttcaacctgaatcaaataaagatcgcactaa 22493204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 27050362 - 27050417
Alignment:
Q  80 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||| |||||| ||||||||| || |||||||||||||||  ||||||||||    
T  27050362 tgcatttgctcaaagctaatctttcgacatgaatcaaataaacaccgcactaagac 27050417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 135
Target Start/End: Original strand, 27704985 - 27705024
Alignment:
Q  96 taatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  27704985 taatctttcaacttgaatcaaataaacactgcattaagac 27705024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 32740986 - 32740935
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaata 119  Q
    |||||||||||||||| ||| |||||  |||||||||||| |||||||||||    
T  32740986 attgatcggatttgcacttgctcaaaactaatctttcaacctgaatcaaata 32740935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 36253164 - 36253109
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| ||| |||||| |||| ||||||| |||||||||||||||    
T  36253164 attgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaaca 36253109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 25531730 - 25531620
Alignment:
Q  25 atattcatgtctcttgatgtgcaacattgatgacgccaaagttattga-tcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||||||||||  |||  ||||| |||||||| || |||| ||||| |  |||||||| ||| |||||| ||||| |||||| | |||||||||||||    
T  25531730 atattcatgtctcaggatcagcaacgttgatgacaccgaagtcattgaatttgatttgcacttgctcaaagctaatcattcaaccttaatcaaataaaca 25531631  T
Q  124 ttgcactaaga 134  Q
      |||||||||    
T  25531630 ccgcactaaga 25531620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 6667629 - 6667532
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||| ||| |||| ||| ||||||  ||||||||||||||| |||| ||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  6667629 attgatcagatatgcacttgatcaaagccaatctttcaacttgagtcaattaaacaccgcactaagacggaaaataaaaaacacaccgcacaaagacg 6667532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 9137614 - 9137545
Alignment:
Q  96 taatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||||||||  ||||||||||||||||||| ||||||| | | |||||| ||||| || || ||||||    
T  9137614 taatctttcaaactgaatcaaataaacattgcgctaagacgggaaataaaaaacacaacgcacaaagacg 9137545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 46881443 - 46881346
Alignment:
Q  38 ttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||| |||||| |||| || || ||| | |||||| | ||||| | ||| |||||  |||| ||||||| | |||||||||||||||||||||||||    
T  46881443 ttgatctgcaacgttgacgatgcaaaaatcattgattgaatttgaacttgatcaaaactaatatttcaacctaaatcaaataaacattgcactaagac 46881346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 9137227 - 9137135
Alignment:
Q  31 atgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||||  ||| |||||| |||| ||||||||||| | |||||| || |||| ||  |||||| |||||||| ||| | |||||||||||||    
T  9137227 atgtctccggatctgcaacgttgacgacgccaaagtcaatgatcgaatatgcactttctcaaagctaatcttttaaccttaatcaaataaaca 9137135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 17223378 - 17223298
Alignment:
Q  57 acgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 137  Q
    |||||||||| ||||||| ||| |||  ||  |||||| || |||||| || |||||||||||| ||| ||||||||||||    
T  17223378 acgccaaagtcattgatcagatctgcgcttaatcaaagctagtctttctacctgaatcaaataatcatcgcactaagacag 17223298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 36719439 - 36719491
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataa 120  Q
    ||||||| ||| || | ||| ||||||||||||||||||| ||||||||||||    
T  36719439 attgatcagatctgtacttgctcaaagttaatctttcaacctgaatcaaataa 36719491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 8712813 - 8712697
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaat 118  Q
    |||||||||||||||||||| ||| |||||| |||| ||||||||||| ||||||||||| |||| ||| |||||| |||||||||||| ||||||||||    
T  8712813 atgactatattcatgtctctggatctgcaacgttgacgacgccaaagtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaat 8712714  T
Q  119 aaacattgcactaagac 135  Q
    |||||| ||||||||||    
T  8712713 aaacatcgcactaagac 8712697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 5814619 - 5814513
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 128  Q
    |||||||||| ||| |||||| |||||||||||||||| |||||||| || |||| ||| |||||| |||||||||||| ||||||||||||||| ||||    
T  5814619 tcatgtctctggatctgcaacgttgatgacgccaaagtcattgatcgaatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgca 5814520  T
Q  129 ctaagac 135  Q
    |||||||    
T  5814519 ctaagac 5814513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 56236670 - 56236762
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaa 121  Q
    |||||||||  ||| |||||| |||| ||||||||||| ||||||||||| |||  ||| |||||||||||||||||||||||||||||||||    
T  56236670 tcatgtctccggatctgcaacgttgacgacgccaaagtcattgatcggatctgcgcttgctcaaagttaatctttcaacttgaatcaaataaa 56236762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 6911914 - 6911817
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||  |||||||||| |||||||||||| ||||||||||||||| ||||||||||||| | |||||| ||||| || || ||||||    
T  6911914 attgatcggatctgctcttgttcaaagctaatctttcaacctgaatcaaataaacactgcactaagacaggaaataaaaaacacaccgcacaaagacg 6911817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 13965849 - 13965697
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    |||||||||||||||||||  ||| | |||| |||| ||||||||||||||||      ||||||| |||| ||| |||||| |||||||||||| | ||    
T  13965849 atgactatattcatgtctccggatctacaacgttgacgacgccaaagttattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctaaa 13965750  T
Q  113 tcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||||||||  |||||||||| | | |||||| |||||||| || ||||||    
T  13965749 tcaaataaacaccgcactaagacgggaaataaaaaacacatcgcacaaagacg 13965697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 3159277 - 3159161
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaat 118  Q
    |||||||| |||| |||||  ||| |||||| |||||||||| ||| | ||||||||||| |||| ||| |||||| ||| |||||||| ||| ||||||    
T  3159277 atgactatgttcaagtctccggatctgcaacgttgatgacgctaaaatcattgatcggatatgcacttgctcaaagctaacctttcaacctgattcaaat 3159178  T
Q  119 aaacattgcactaagac 135  Q
    |||||| ||||||||||    
T  3159177 aaacatcgcactaagac 3159161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 7861093 - 7861190
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||| ||| | ||||||||||||||||| |||||||||||||||  |||||||||| | | || ||| |||||||| |||||||||    
T  7861093 attgatcggatctgcacttgcttaaagttaatctttcaacctgaatcaaataaacaccgcactaagacgggaaatcaaaaacacatcgcacgaagacg 7861190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 22757328 - 22757259
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 137  Q
    ||||||||||| |||||||| |||||| |||||||||||| |||||||||||||||  ||||||||||||    
T  22757328 attgatcggatctgcatttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacag 22757259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 154
Target Start/End: Original strand, 394161 - 394247
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatc 154  Q
    ||||||||||| | || ||| ||||||||||||||||||| |||||||||||||||  |||||||||| | | |||||| |||||||    
T  394161 attgatcggatctacacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaagacgggaaataaaaaacacatc 394247  T

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Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 7060602 - 7060473
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 122  Q
    |||||||||| ||| |||||| |||||||||||||||| ||||      ||||||| |||| ||| |||||| |||||||||||| ||||||||||||||    
T  7060602 tcatgtctctggatctgcaacgttgatgacgccaaagtaattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaac 7060503  T
Q  123 attgcactaagacagtatataaaagacaca 152  Q
    |  ||| |||||| | | |||||| |||||    
T  7060502 accgcattaagacgggaaataaaaaacaca 7060473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 31522225 - 31522113
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 122  Q
    |||||||||  ||| |||||| |||||||||||||||| ||||      ||||||| |||| ||| |||||  |||||||||||| ||||||||||||||    
T  31522225 tcatgtctccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaataaac 31522126  T
Q  123 attgcactaagac 135  Q
    | |||||||||||    
T  31522125 actgcactaagac 31522113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 53647866 - 53647769
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||| ||| ||||||||||| ||||||| |||||||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  53647866 attgatcggatctgcacttgctcaaagttaatttttcaacctgaatcaaataaacaccgcactaagacggaaaataaaaaacacaccgcacaaagacg 53647769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 20887644 - 20887727
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 152  Q
    |||||||||||||||||||| |||||| |||||||||||  |||||| ||||||||| |||||||||| | | |||||| |||||    
T  20887644 attgatcggatttgcatttgctcaaagctaatctttcaatctgaatc-aataaacatcgcactaagacgggaaataaaaaacaca 20887727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 25658400 - 25658304
Alignment:
Q  69 ttgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||||||| |||| ||| |||||| |||||||||||| | |||||||||||||| |||||||||| | | |||||| ||||| || || ||||||    
T  25658400 ttgatcggatctgcacttgctcaaagctaatctttcaacataaatcaaataaacatcgcactaagacggcaaataaaaaacacaccgcacaaagacg 25658304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 13586127 - 13586194
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  13586127 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 13586194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 20399790 - 20399857
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||||||||||| ||| |||||| |||||||||||  |||||||||||||||  ||||||||||    
T  20399790 attgatcggatttgcacttgctcaaagctaatctttcaaactgaatcaaataaacaccgcactaagac 20399857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 24789411 - 24789356
Alignment:
Q  80 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||| |||||| |||||||||||| ||||||||||||||| |||||||||||    
T  24789411 tgcatttgatcaaagctaatctttcaacctgaatcaaataaacactgcactaagac 24789356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 24818848 - 24818903
Alignment:
Q  80 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||| |||||| |||||||||||| ||||||||||||||| |||||||||||    
T  24818848 tgcatttgatcaaagctaatctttcaacctgaatcaaataaacactgcactaagac 24818903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 32616746 - 32616813
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||| ||| |||| ||| |||||| ||||||||||||||||||||||||||||  ||||||||||    
T  32616746 attgatcagatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcactaagac 32616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 36124235 - 36124302
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||| ||||||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  36124235 attgatcgaatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 36124302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 40198408 - 40198487
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||| |||| |||  |||||| ||||||||||  | ||||||||||||| |||||||||||| |||||||||||||||    
T  40198408 tgcaacgttgacgacctcaaagtgattgatcggacatacatttgttcaaagataatctttcaacctgaatcaaataaaca 40198487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 43244268 - 43244335
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||| |||||||||||||||||| |||||||||  ||||||||||    
T  43244268 attgatcggatatgcacttgctcaaagctaatctttcaacttgaatgaaataaacaccgcactaagac 43244335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 30202272 - 30202175
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||||||||||||| ||  |||||| |||| |||||||||||||||||||| || |||||||| || | | || ||| ||||| ||||| ||||||    
T  30202272 attgatcggatttgcacttcctcaaagctaatttttcaacttgaatcaaataaccactgcactaaaacgggaaatcaaaaacacaccgtacaaagacg 30202175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 2448022 - 2447950
Alignment:
Q  80 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 152  Q
    |||| ||| ||||||||||||||||||| | |||||||||||||  |||||||||| | |||||||| |||||    
T  2448022 tgcacttgctcaaagttaatctttcaacataaatcaaataaacaccgcactaagacgggatataaaaaacaca 2447950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 42197784 - 42197720
Alignment:
Q  71 gatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  42197784 gatcggatctgcacttgctcaaagataatctttcaacctgaatcaaataaacaccgcactaagac 42197720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 24825883 - 24825816
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||| |||||||||||| ||||||||||||| |  ||||||||||    
T  24825883 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaagaccgcactaagac 24825816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 27395064 - 27394997
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| | |||| |||||||||||| |||||||||||||||  ||||||||||    
T  27395064 attgatcggatctgcacttgcttaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 27394997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 50801451 - 50801384
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||| ||| |||| ||| ||||| ||||||||||||| |||||||||||||||  ||||||||||    
T  50801451 attgatcagatctgcacttgctcaaaattaatctttcaacctgaatcaaataaacacagcactaagac 50801384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 11210221 - 11210267
Alignment:
Q  89 tcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||    
T  11210221 tcaaagttaatctttcaacctgaatcaaataaacaccgcactaagac 11210267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 38944036 - 38944102
Alignment:
Q  69 ttgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||||| |||| ||| |||||| || ||||||||| |||||||||||||||  ||||||||||    
T  38944036 ttgatcggatctgcacttgctcaaagctattctttcaacctgaatcaaataaacaccgcactaagac 38944102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 56062202 - 56062156
Alignment:
Q  89 tcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||| |||| | |||||||||||||||||||||||||||||||||    
T  56062202 tcaaagataatatgtcaacttgaatcaaataaacattgcactaagac 56062156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 477899 - 477996
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||| |||| |||| ||| |||||| |||| ||||||| |||||||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  477899 attgattggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaacaccgcactaagacgggaaataaaaaacacaccgcacaaagacg 477996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 24568600 - 24568697
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||| ||  |||||| |||||||||||| |||||||||||||||   ||||||||| | | |||||| ||||| || || ||||||    
T  24568600 attgatcggatctgcactttctcaaagctaatctttcaacctgaatcaaataaacaccccactaagacggaaaataaaaaacacaccgcacaaagacg 24568697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 39837829 - 39837732
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||| ||| ||||||  ||| ||||||| |||||||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  39837829 attgatcggatctgcacttgctcaaagcaaatatttcaacctgaatcaaataaacaccgcactaagacgggaaataaaacacacaccgcacaaagacg 39837732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 6882190 - 6882106
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 152  Q
    ||||||||||| |||| ||| ||| || |||||||||||| |||||||||||||||  ||| |||||| | | |||||| |||||    
T  6882190 attgatcggatctgcacttgctcatagctaatctttcaacctgaatcaaataaacaccgcattaagacggaaaataaaaaacaca 6882106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 24611687 - 24611739
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataa 120  Q
    ||||||| ||| |||| ||| ||||||||||||||||||| ||||||||||||    
T  24611687 attgatcagatctgcacttgctcaaagttaatctttcaacctgaatcaaataa 24611739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 26674606 - 26674554
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataa 120  Q
    ||||||||||| |||| ||| |||||| |||||||||||| ||||||||||||    
T  26674606 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataa 26674554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 27090957 - 27090889
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagaca 136  Q
    ||||||||||| | || ||| ||||||||||||||||||| ||||| | |||||||  |||||||||||    
T  27090957 attgatcggatctacacttgctcaaagttaatctttcaacctgaataagataaacaccgcactaagaca 27090889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 43278165 - 43278101
Alignment:
Q  71 gatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||| | || ||| |||||||||||||| |||| |||||||||||||||  ||||||||||    
T  43278165 gatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagac 43278101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 626437 - 626492
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||| |||||| |||| ||| |||||| |||||||||||| |||||||||||||||    
T  626437 attggtcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 626492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 7083699 - 7083750
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaata 119  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||    
T  7083699 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaata 7083750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 12716992 - 12717071
Alignment:
Q  56 gacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| ||| ||| ||| |||| ||  |||||| ||||| |||||| |||||||||||||||  ||||||||||    
T  12716992 gacgccaaagtcattaatcagatctgcacttaatcaaagctaatccttcaacctgaatcaaataaacaccgcactaagac 12717071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 123
Target Start/End: Complemental strand, 12754385 - 12754342
Alignment:
Q  80 tgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||    
T  12754385 tgcacttggtcaaagttaatgtttcaacttgaatcaaataaaca 12754342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 19745668 - 19745526
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 122  Q
    |||||||||  ||| ||||||||||| ||||| ||||| ||||      ||||||| |||| ||| |||||| |||||||||||| ||||||||| ||||    
T  19745668 tcatgtctcccgatctgcaacattgacgacgctaaagtcattgtcattaatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaac 19745569  T
Q  123 attgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |   ||||||||| | | |||||| ||||| || || ||||||    
T  19745568 acctcactaagacgggaaataaaaaacacaccgcacaaagacg 19745526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 165
Target Start/End: Original strand, 19794138 - 19794280
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 122  Q
    |||||||||  ||| ||||||||||| ||||| ||||| ||||      ||||||| |||| ||| |||||| |||||||||||| ||||||||| ||||    
T  19794138 tcatgtctcccgatctgcaacattgacgacgctaaagtcattgtcattaatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaac 19794237  T
Q  123 attgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |   ||||||||| | | |||||| ||||| || || ||||||    
T  19794238 acctcactaagacgggaaataaaaaacacaccgcacaaagacg 19794280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 22621689 - 22621610
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||| |||| |||| ||||||  |||||  |||||||| ||||| |||  |||||||||||| |||||||||||||||    
T  22621689 tgcaacgttgacgacgtcaaagtctttgattagatttgcacttgttaaaaactaatctttcaacctgaatcaaataaaca 22621610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 24100374 - 24100319
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| | || ||| |||||| |||||||||||| |||||||||||||||    
T  24100374 attgatcggatctacacttgctcaaagctaatctttcaacctgaatcaaataaaca 24100319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 26742350 - 26742417
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| | || ||| |||||| |||||||||||  |||||||||||||||  ||||||||||    
T  26742350 attgatcggatctacacttgctcaaagctaatctttcaatctgaatcaaataaacaccgcactaagac 26742417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 29923069 - 29923014
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| ||| ||| || |||||||||||| |||||||||||||||    
T  29923069 attgatcggatctgcacttgctcatagctaatctttcaacctgaatcaaataaaca 29923014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 51152358 - 51152303
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| ||| |||||| |||| ||||||| |||||||||||||||    
T  51152358 attgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaaca 51152303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 13169285 - 13169383
Alignment:
Q  25 atattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||||||| |||  || |||||| ||||||| |||| |||  ||||| | ||||||| ||| |||||  |||||||||||  |||||||||||||||    
T  13169285 atattcatgtttctgaatctgcaacgttgatgatgccacagtcgttgattgaatttgcacttgatcaaaactaatctttcaatctgaatcaaataaaca 13169383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 29268685 - 29268731
Alignment:
Q  89 tcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||| ||||||||||| |||||||||||||||  ||||||||||    
T  29268685 tcaaagtcaatctttcaacctgaatcaaataaacaccgcactaagac 29268731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 43493186 - 43493240
Alignment:
Q  80 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    |||| ||| |||||| |||||||||||| |||||||||||||||  |||||||||    
T  43493186 tgcacttgctcaaagctaatctttcaacctgaatcaaataaacacagcactaaga 43493240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 28837299 - 28837230
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 137  Q
    |||| |||||| | || ||| |||||| |||||||||||| ||||| |||||||||  ||||||||||||    
T  28837299 attgttcggatcttcacttgctcaaagctaatctttcaacgtgaattaaataaacaccgcactaagacag 28837230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 45681836 - 45681877
Alignment:
Q  90 caaagttaatctttcaacttgaatcaaataaacattgcacta 131  Q
    |||||||||||||||||| ||||||||||||| | |||||||    
T  45681836 caaagttaatctttcaacatgaatcaaataaatagtgcacta 45681877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 6082287 - 6082367
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 124  Q
    |||||| |||| || |||||| | ||||| || || |||| ||| |||||| |||||||||||| | ||||||||||||||    
T  6082287 tgcaacgttgacgatgccaaaatcattgaccgaatctgcacttgctcaaagctaatctttcaacctaaatcaaataaacat 6082367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 39523644 - 39523576
Alignment:
Q  68 attgatcggatttgcatttgttcaaagt-taatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||   |||||||||||| |||||||||||||||  ||||||||||    
T  39523644 attgatcggatctgcacttgctcaaaaactaatctttcaacctgaatcaaataaacaccgcactaagac 39523576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 17687478 - 17687384
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||||||  ||| |||||||||||||||| |||||| ||||||||||| |||||||| ||||| ||||||||||||  |||||||||||||||    
T  17687478 tcatgtctccggatctgcaacattgatgacgtcaaagtcattgatcggatatgcatttgctcaaatttaatctttcaatctgaatcaaataaaca 17687384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 6635482 - 6635415
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||  ||||||||||    
T  6635482 attgatcggatctgcatttgctcaaagctaatctttcaacttgaatcaaataaacaccgcactaagac 6635415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 7771708 - 7771774
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  7771708 attgatcggatctgcacttgctcaaagttaatctttcaacttgaatcaaataaacaccgcactaaga 7771774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 6281278 - 6281211
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||| ||||||||||    
T  6281278 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgcactaagac 6281211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 17732273 - 17732339
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    ||||||||||||| || ||| |||||| ||||||||||||||||||||||||||||  |||||||||    
T  17732273 attgatcggatttacacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcactaaga 17732339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 25962196 - 25962086
Alignment:
Q  25 atattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 124  Q
    |||| ||||||||  ||| | |||| |||| ||||| ||||| ||||||| ||| |||| ||| |||||  |||||||||||| |||||||||||||||     
T  25962196 atatccatgtctccggatctacaacgttgacgacgcaaaagtcattgatcagatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacac 25962097  T
Q  125 tgcactaagac 135  Q
    |||||||||||    
T  25962096 tgcactaagac 25962086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 29098068 - 29097956
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaa------gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 122  Q
    |||||||||||||| |||||| |||| |||||||||      || ||||||||||| |||  |||||||||| |||| ||||||| ||||||||||||||    
T  29098068 tcatgtctcttgatctgcaacgttgacgacgccaaaatcattgtcattgatcggatctgctcttgttcaaagctaatttttcaacctgaatcaaataaac 29097969  T
Q  123 attgcactaagac 135  Q
    |  ||||||||||    
T  29097968 accgcactaagac 29097956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 11858141 - 11858077
Alignment:
Q  71 gatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||| |||| ||| ||||||||||||||||||| |||||||||||||||  ||||||||||    
T  11858141 gatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaagac 11858077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 35402257 - 35402209
Alignment:
Q  80 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 128  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  35402257 tgcacttgttcaaagttaatctttcaacctgaatcaaataaacattgca 35402209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 146
Target Start/End: Complemental strand, 39915749 - 39915649
Alignment:
Q  46 caacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaa 145  Q
    |||| |||| |||| ||||||||||||| |||| |||| ||| |||||| |||||||||||| ||||| |||||||||  |||||| ||||| | |||||    
T  39915749 caacgttgacgacgtcaaagttattgattggatatgcacttgctcaaagctaatctttcaacctgaataaaataaacaccgcactatgacaggaaataaa 39915650  T
Q  146 a 146  Q
    |    
T  39915649 a 39915649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 3079221 - 3079288
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| ||||||  |||||||||||| ||||||||||||||| ||||||||||    
T  3079221 attgatcggatctgcacttgctcaaagcaaatctttcaactcgaatcaaataaacatcgcactaagac 3079288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 11734651 - 11734773
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    ||||||||||||| |||||  ||| |||||| |||| ||||||||||| ||||      ||||||| |||| |||  ||||| |||||||||||  ||||    
T  11734651 atgactatattcaagtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcagttgcgcaaagctaatctttcaatctgaa 11734750  T
Q  113 tcaaataaacattgcactaagac 135  Q
    |||||||||||| ||||||||||    
T  11734751 tcaaataaacatcgcactaagac 11734773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 17096128 - 17096183
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||||||| |||||| |||||||||||| |||||||||||||||    
T  17096128 attgatcggatctgcatttgctcaaagctaatctttcaacctgaatcaaataaaca 17096183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 23882003 - 23882070
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| || | ||| ||||||||||||||||||| |||||||||||||||  ||||||||||    
T  23882003 attgatcggatctgtacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaagac 23882070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 33164355 - 33164422
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||  |||||||||| |||||||||||| |||||||||||||||  ||||||||||    
T  33164355 attgatcggatctgctcttgttcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 33164422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 7151082 - 7150984
Alignment:
Q  31 atgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcac 129  Q
    |||||||| ||| |||||| |||||||||||||||| |||||||| ||||| | ||  |||||   | ||||||||| |||||||||||||||| ||||    
T  7151082 atgtctctggatctgcaacgttgatgacgccaaagtcattgatcgaatttgtacttactcaaaaccagtctttcaacctgaatcaaataaacatcgcac 7150984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 34431292 - 34431197
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||| ||| |||||||||||||  |||| |||||||||||||||  |||||||||||| | |||||| ||||| || || ||||||    
T  34431292 attgatcggatctgcacttgctcaaagttaatct--caacctgaatcaaataaacaccgcactaagacaggaaataaaaaacacaccgcacaaagacg 34431197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 39531254 - 39531363
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttatt----gatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 124  Q
    |||||||||| ||| |||||| |||| ||||||||||| |||    |||||||| |||| ||  |||||| ||||||||||||  |||||||||||||||    
T  39531254 tcatgtctctggatctgcaacgttgacgacgccaaagtcattcattgatcggatctgcactttctcaaagctaatctttcaacccgaatcaaataaacat 39531353  T
Q  125 tgcactaaga 134  Q
     | |||||||    
T  39531354 cgtactaaga 39531363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 374509 - 374438
Alignment:
Q  75 ggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaa 146  Q
    |||| |||| ||| ||||||||| ||||||||||||||||||| |||||  |||||||||||| | ||||||    
T  374509 ggatatgcacttgatcaaagttactctttcaacttgaatcaaacaaacaccgcactaagacagaaaataaaa 374438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 980916 - 980983
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||| |||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  980916 attgctcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 980983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 3740646 - 3740536
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    |||||||||||||||| ||  ||| ||||||||| | ||||||||||| ||||      ||||||| |||| ||| |||||| |||||||||||| ||||    
T  3740646 atgactatattcatgtatccggatctgcaacattaacgacgccaaagtcattgtcattgatcggatctgcagttgctcaaagctaatctttcaacctgaa 3740547  T
Q  113 tcaaataaaca 123  Q
    | |||||||||    
T  3740546 ttaaataaaca 3740536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 17699817 - 17699703
Alignment:
Q  44 tgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 137  Q
    ||||||||||| ||||||||||||||||      ||| ||| || | ||| |||||| |||||||||||| ||||||||||||||  ||||||||||| |    
T  17699817 tgcaacattgacgacgccaaagttattgtcattgatcagatctgtacttgctcaaagctaatctttcaacctgaatcaaataaacgatgcactaagacgg 17699718  T
Q  138 tatataaaagacaca 152  Q
     | |||||| |||||    
T  17699717 gaaataaaaaacaca 17699703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 20483420 - 20483365
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| ||| |||||| |||||||||||||||| |||||||||||    
T  20483420 attgatcggatctgcacttgatcaaagctaatctttcaacttgagtcaaataaaca 20483365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 25487825 - 25487775
Alignment:
Q  85 ttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||| |||||| |||||||||| ||||||||||||||| |||||||||||    
T  25487825 ttgtttaaagttgatctttcaacctgaatcaaataaacaatgcactaagac 25487775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 26240577 - 26240650
Alignment:
Q  80 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacat 153  Q
    |||||||  |||||||||||| |||||| ||||||||||||||||  ||||||||| | | |||||| ||||||    
T  26240577 tgcatttcatcaaagttaatcgttcaacctgaatcaaataaacatcacactaagacggaaaataaaaaacacat 26240650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 32309404 - 32309331
Alignment:
Q  62 aaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||| ||||||  |||||||| ||| |||||||||||||| |||| ||||||||||||| || | ||||||||    
T  32309404 aaagtcattgattcgatttgcacttgctcaaagttaatcttacaacctgaatcaaataaatatcgtactaagac 32309331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 32347556 - 32347656
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 122  Q
    |||||||||  ||| |||||  |||| ||||||||||||||||      ||||||| |||| ||| |||||| |||||||||||||||||| ||||||||    
T  32347556 tcatgtctccggatctgcaatgttgacgacgccaaagttattgtcatcgatcggatctgcacttgctcaaagctaatctttcaacttgaattaaataaac 32347655  T
Q  123 a 123  Q
    |    
T  32347656 a 32347656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 35275856 - 35275929
Alignment:
Q  51 ttgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 124  Q
    |||| |||||||||||||||||| |||| || | ||| |||||| ||| ||||||||  |||||||||||||||    
T  35275856 ttgacgacgccaaagttattgattggatctgtacttgctcaaagctaacctttcaaccggaatcaaataaacat 35275929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 42609378 - 42609322
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 124  Q
    |||||||| || |||| ||| |||||| |||||||||||| ||||||||||||||||    
T  42609378 attgatcgaatatgcacttgctcaaagctaatctttcaacatgaatcaaataaacat 42609322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 43494094 - 43494030
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaa 132  Q
    |||||| |||| |||| ||| ||||||||| ||||||||| |||||||||||||||  |||||||    
T  43494094 attgattggatatgcacttgctcaaagttagtctttcaacctgaatcaaataaacaccgcactaa 43494030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 12215390 - 12215312
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||| |||| ||||| ||||| ||||||||||| |||| ||| |||||  |||||||||||| | |||||||||||||    
T  12215390 tgcaacgttgacgacgcaaaagtcattgatcggatatgcacttgctcaaaactaatctttcaac-taaatcaaataaaca 12215312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 17331562 - 17331495
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||| |||||| |||  |||||||||  |||||||||||| |||||||||||||||  ||||||||||    
T  17331562 attggtcggatctgctcttgttcaaaactaatctttcaacctgaatcaaataaacaccgcactaagac 17331495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 23428486 - 23428419
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| | || ||| |||||| ||||||||| || |||||||||||||||  ||||||||||    
T  23428486 attgatcggatctacacttgctcaaagctaatctttctacctgaatcaaataaacaccgcactaagac 23428419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 26294944 - 26295031
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcg 155  Q
    ||||||| ||| |||| ||| |||||  |||| ||||||| |||||||||||||||  |||||||||| | | || ||||||||||||    
T  26294944 attgatcagatctgcacttgctcaaaactaatatttcaacctgaatcaaataaacaccgcactaagacggaaaatcaaagacacatcg 26295031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 39531633 - 39531691
Alignment:
Q  77 atttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||| ||| | |||| |||||||||||| |||||||||||| ||||| ||||||||    
T  39531633 atttgcacttgattaaagctaatctttcaacctgaatcaaataagcattgtactaagac 39531691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 12891904 - 12891844
Alignment:
Q  74 cggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    ||||| |||| ||| |||||| |||||||||||| || ||||||||||||  |||||||||    
T  12891904 cggatctgcacttgctcaaagctaatctttcaacctggatcaaataaacaccgcactaaga 12891844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 34906376 - 34906320
Alignment:
Q  79 ttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||| ||| |||||| ||| |||||||| | ||||||||||||||| |||||||||    
T  34906376 ttgcacttgctcaaagctaaactttcaaccttaatcaaataaacattacactaagac 34906320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 165
Target Start/End: Original strand, 13871468 - 13871604
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 128  Q
    |||||||||  ||| |||||| |||| ||||||||||| ||||||| |||||||| ||| ||||||  |||||| |||| ||||||||||||||| ||||    
T  13871468 tcatgtctccggatctgcaacgttgacgacgccaaagtcattgatcagatttgcacttgctcaaagcaaatcttccaacctgaatcaaataaacactgca 13871567  T
Q  129 ctaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||| | | |||||| ||||| || || ||||||    
T  13871568 ctaagacggaaaataaaaaacacaccgcacaaagacg 13871604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 15589940 - 15590050
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaag------ttattgatcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    |||||||||||||||||||  ||| ||||||||||| ||||||||||      | |||||||||||||||| ||| |||||| |||||||||||| ||||    
T  15589940 atgactatattcatgtctccggatctgcaacattgacgacgccaaagccattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaa 15590039  T
Q  113 tcaaataaaca 123  Q
    |||||||||||    
T  15590040 tcaaataaaca 15590050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 6296136 - 6296233
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||| | | |||||| ||||| || || ||||||    
T  6296136 attgatcggatctgcatttgctcaaagttaatcttttaacctgaatcaaataaacactgcactaagacggaaaataaaaaacacaccgcacaaagacg 6296233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 6302946 - 6303043
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||| | | |||||| ||||| || || ||||||    
T  6302946 attgatcggatctgcatttgctcaaagttaatcttttaacctgaatcaaataaacactgcactaagacggaaaataaaaaacacaccgcacaaagacg 6303043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 8693486 - 8693608
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    |||||||||||||||||||  ||| |||||| |||| ||| ||||||| ||||      ||||||| |||| ||| |||||| |||||||||||| ||||    
T  8693486 atgactatattcatgtctccggatctgcaacgttgacgacaccaaagtcattgtccttgatcggatctgcacttgctcaaagctaatctttcaacctgaa 8693585  T
Q  113 tcaaataaacattgcactaagac 135  Q
    ||||||||||| |||||||||||    
T  8693586 tcaaataaacactgcactaagac 8693608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 7076790 - 7076709
Alignment:
Q  54 atgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||| |||||||||| | | ||||||| ||| |||||||||||||||||||||| | |||||||||| |||||||||||    
T  7076790 atgacgctaaagttattggttgaatttgcacttgatcaaagttaatctttcaacttggaacaaataaacactgcactaagac 7076709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 2304725 - 2304792
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||| |||||||||||| ||||||||||||||| |||||||||||    
T  2304725 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgcactaagac 2304792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 31705399 - 31705332
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| |||||||||| |||||||||||| |||||||||||||||  ||||||||||    
T  31705399 attgatcggatctgcacttgttcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 31705332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 31937307 - 31937374
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| |||||||||| |||||||||||| |||||||||||||||  ||||||||||    
T  31937307 attgatcggatctgcacttgttcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 31937374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 34503768 - 34503842
Alignment:
Q  46 caacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataa 120  Q
    |||||||||||| ||||||||||||||| | ||||||| ||| || ||||| |||||||||||| ||||||||||    
T  34503768 caacattgatgatgccaaagttattgattgaatttgcacttgatcgaagtttatctttcaacttaaatcaaataa 34503842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 23101295 - 23101348
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaa 121  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  23101295 attgatcggatttgcacttgctcaaagttaatctttcaacctgaatcaaataaa 23101348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 12481257 - 12481324
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||  ||||||||||||||||||||||| | |||||||||||||  ||||||||||    
T  12481257 attgatcggatctgctcttgttcaaagttaatctttcaacctaaatcaaataaacaccgcactaagac 12481324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 23654484 - 23654417
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||  |||||||||| |||||||||||| |||||||||||||||  ||||||||||    
T  23654484 attgatcggatctgctcttgttcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 23654417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 35219800 - 35219867
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||||||||||| ||| |||||| |||| ||||||| |||||||||||||||  ||||||||||    
T  35219800 attgatcggatttgcacttgctcaaagctaatttttcaacctgaatcaaataaacaccgcactaagac 35219867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 165
Target Start/End: Original strand, 4921735 - 4921865
Alignment:
Q  35 ctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    |||| ||| |||||| |||| |||  |||||| ||||||||||| |||| ||| |||||| |||||||||||| || ||||||||||||  ||| |||||    
T  4921735 ctctggatctgcaacgttgacgacaacaaagtcattgatcggatctgcacttgctcaaagctaatctttcaacctggatcaaataaacaccgcagtaaga 4921834  T
Q  135 cagtatataaaagacacatcgtacgaagacg 165  Q
    | | | || ||| |||||||| || ||||||    
T  4921835 cgggaaatcaaaaacacatcgcacaaagacg 4921865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 6419766 - 6419842
Alignment:
Q  89 tcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||| |||||||||||| |||| |||||||||||||||||||||| | | |||||| ||||| || || ||||||    
T  6419766 tcaaagctaatctttcaacctgaaccaaataaacattgcactaagacgggaaataaaaaacacaccgcacaaagacg 6419842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 1106754 - 1106821
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||| ||| |||| ||| |||||| |||||||||||| |||||||||||||||| | ||||||||    
T  1106754 attgatcagatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgtactaagac 1106821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 27135369 - 27135279
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||||||||||| |||| | |||||| | || | |||||| |||||| ||||| ||||| || |||||||||||||| ||||||||||    
T  27135369 tgcaacattgatgacgacaaaatcattgattgaatctacatttgctcaaagataatcgttcaa-ttaaatcaaataaacatcgcactaagac 27135279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 23638020 - 23638074
Alignment:
Q  81 gcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  23638020 gcatttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 23638074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 3359011 - 3358950
Alignment:
Q  62 aaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||||||||| |||| |||||||| |||||  || ||||||||| |||||||||||||||    
T  3359011 aaagttattgattggatatgcatttgatcaaaactactctttcaacctgaatcaaataaaca 3358950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 19402703 - 19402764
Alignment:
Q  74 cggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  19402703 cggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 19402764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 2488371 - 2488303
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagaca 136  Q
    ||||||||||| | || ||| ||||||||||||||||||| ||||| | |||||||  |||||||||||    
T  2488371 attgatcggatctacacttgctcaaagttaatctttcaacctgaataagataaacaccgcactaagaca 2488303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 4394002 - 4393938
Alignment:
Q  70 tgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    ||||| ||| |||| ||| ||||||||||||||||||| ||| |||||||||||  |||||||||    
T  4394002 tgatcagatctgcacttgatcaaagttaatctttcaacctgagtcaaataaacaccgcactaaga 4393938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 12342971 - 12342927
Alignment:
Q  91 aaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||    
T  12342971 aaagttaatatttcaacatgaatcaaataaacattacactaagac 12342927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 29284964 - 29284920
Alignment:
Q  91 aaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||| ||||||||||||||||||||||||||||  ||||||||||    
T  29284964 aaagctaatctttcaacttgaatcaaataaacaccgcactaagac 29284920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 12654166 - 12654245
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||| |||||||||||||||| ||||||| ||| | || ||| |||||  || ||||||||| | |||||||||||||    
T  12654166 tgcaacgttgatgacgccaaagtcattgatcagatctacacttgctcaaaactagtctttcaacctaaatcaaataaaca 12654245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 1915082 - 1915128
Alignment:
Q  77 atttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||| ||||||| || |||||||||||| |||||||||||||||    
T  1915082 atttgcacttgttcatagctaatctttcaacctgaatcaaataaaca 1915128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Complemental strand, 14730847 - 14730798
Alignment:
Q  77 atttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattg 126  Q
    ||||||| ||| | |||||||||| |||||| ||||||||||||||||||    
T  14730847 atttgcacttgattaaagttaatcattcaacctgaatcaaataaacattg 14730798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 15985868 - 15985912
Alignment:
Q  89 tcaaagttaatctttcaacttgaatcaaataaacattgcactaag 133  Q
    ||||| ||||||||||||||| |||||||||||||| ||| ||||    
T  15985868 tcaaaattaatctttcaacttaaatcaaataaacatagcattaag 15985912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 5754559 - 5754455
Alignment:
Q  31 atgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcact 130  Q
    |||||||  ||| |||||| |||| ||| ||||||| ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  |||||    
T  5754559 atgtctccggatctgcaacgttgacgacaccaaagtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 5754460  T
Q  131 aagac 135  Q
    |||||    
T  5754459 aagac 5754455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 34471239 - 34471147
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaa 121  Q
    |||||||||| ||| |||||| ||||  |||||||||| |||||| |||| |||| ||| ||||||||||||||||||| |||||||||||||    
T  34471239 tcatgtctctagatctgcaacgttgacaacgccaaagtcattgattggatctgcacttgctcaaagttaatctttcaacatgaatcaaataaa 34471147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 32314731 - 32314579
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    ||||||||||| |||||||  ||| |||||| |||| ||||||||||||||||      ||| ||| |||| ||| |||||| |||||||||||| ||||    
T  32314731 atgactatatttatgtctccggatctgcaacgttgacgacgccaaagttattgtcattgatcagatctgcacttgctcaaagctaatctttcaacctgaa 32314632  T
Q  113 tcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  32314631 tcaaataaacaccgcactaagacgggaaataaaaaacacaccgcacaaagacg 32314579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 36868287 - 36868175
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 122  Q
    ||||||||| |||| |||||| |||| ||||||||||| ||||      | |||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  36868287 tcatgtctcctgatctgcaacgttgacgacgccaaagtcattgtcattgaacggatttgcacttgctcaaagttaatctttcaacctgaatcaaataaac 36868188  T
Q  123 attgcactaagac 135  Q
    |  ||||||||||    
T  36868187 accgcactaagac 36868175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 11798386 - 11798477
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||| |||| ||||| ||||| ||||||||||| | ||  || |||||| |||||||||||| |||||||||||||||| ||||||||||    
T  11798386 tgcaacgttgacgacgcaaaagtcattgatcggatctacacctgctcaaagctaatctttcaacctgaatcaaataaacatcgcactaagac 11798477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 18089284 - 18089351
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||| ||||||||||||||||||||||||||||  ||||||||||    
T  18089284 attgatcggatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcactaagac 18089351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 6431265 - 6431355
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    ||||||||||| ||||| ||||| ||||||| ||| |||  ||| ||||||||||||||||||| |||||||||| ||||  |||||||||    
T  6431265 tgcaacattgacgacgcaaaagtcattgatcagatctgcgcttgctcaaagttaatctttcaacctgaatcaaatcaacaccgcactaaga 6431355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 10286894 - 10286991
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  10286894 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgggaaataaaaaacacaccgcacaaagacg 10286991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 19904766 - 19904673
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 137  Q
    |||||| ||| |||||| |||||||| ||| | || |||| ||| |||||||||||||||| || |||||||||||||||| ||||||| ||||    
T  19904766 tgcaacgttggtgacgcaaaagttatcgattgaatatgcacttgatcaaagttaatctttctacctgaatcaaataaacatcgcactaaaacag 19904673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 28230984 - 28231081
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||| ||| |||||| | |||||||||| |||||||||||||||  |||||||||| | |||||||| ||||| || || ||||||    
T  28230984 attgatcggatctgcacttgctcaaagctgatctttcaacctgaatcaaataaacaccgcactaagacgggatataaaaaacacaccgcacaaagacg 28231081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 43473960 - 43474112
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    |||||||||||||||||||  ||| |||||  |||| ||||||||||| ||||      ||| ||| |||| ||| |||||| |||||||||||| ||||    
T  43473960 atgactatattcatgtctccagatctgcaatgttgacgacgccaaagtcattgtcattgatcagatctgcacttgctcaaagctaatctttcaacctgaa 43474059  T
Q  113 tcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||||||||  |||||||||| | | || ||| ||||| ||||| ||||||    
T  43474060 tcaaataaacaccgcactaagacgggaaatcaaaaacacaccgtacaaagacg 43474112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 9689872 - 9689956
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 152  Q
    ||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||  ||||| |||| | | |||||| |||||    
T  9689872 attgatcggatatgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactgagacgggaaataaaaaacaca 9689956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 20124639 - 20124711
Alignment:
Q  51 ttgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||| ||||||||||| |||||||| ||||||| ||| |||||| |||||||||||| ||||| |||||||||    
T  20124639 ttgacgacgccaaagtcattgatcgaatttgcacttgctcaaagctaatctttcaacctgaatgaaataaaca 20124711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 28261720 - 28261859
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    |||||||||||||||||||  ||| |||||| |||| ||||| ||||||||||      ||||||| |||  ||| |||||  |||||||||||| ||||    
T  28261720 atgactatattcatgtctccggatctgcaacgttgacgacgcgaaagttattgtcattgatcggatctgctcttgctcaaaactaatctttcaacctgaa 28261819  T
Q  113 tcaaataaacattgcactaagacagtatataaaagacaca 152  Q
    |||||||||||  |||||||||| | | |||||| |||||    
T  28261820 tcaaataaacaccgcactaagacgggaaataaaaaacaca 28261859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 4732304 - 4732237
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| | || ||| |||||| ||||||||||||||||||||||||||||  ||||||||||    
T  4732304 attgatcggatctacacttgctcaaagataatctttcaacttgaatcaaataaacaccgcactaagac 4732237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 6510696 - 6510649
Alignment:
Q  88 ttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||    
T  6510696 ttcaaagctaatttttcaacttgaatcaaataaacattgcactaagac 6510649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 13740547 - 13740614
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||| |||| || | |||||||||| |||||||||||| |||||||||||||||| ||||||||||    
T  13740547 attgattggatctgtacttgttcaaagctaatctttcaacctgaatcaaataaacatcgcactaagac 13740614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 13878896 - 13878951
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||    
T  13878896 attgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaaca 13878951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 14019021 - 14019076
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||    
T  14019021 attgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaaca 14019076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 15920132 - 15920053
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||| |||| ||||||||||| ||||||||||| |||| |||  ||||| |||| ||||||| |||||||||||||||    
T  15920132 tgcaacgttgacgacgccaaagtcattgatcggatctgcacttgcacaaagctaatatttcaacctgaatcaaataaaca 15920053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 165
Target Start/End: Original strand, 38384299 - 38384441
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 122  Q
    |||||||||  ||| |||||  |||||||||||||||||||||      ||||||| |||| ||| |||||| |||||||||||| ||||| ||||||||    
T  38384299 tcatgtctccggatctgcaatgttgatgacgccaaagttattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaataaaataaac 38384398  T
Q  123 attgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |  |||||||||| | | |||||| ||||| || || ||||||    
T  38384399 accgcactaagacggaaaataaaaaacacaccgcacaaagacg 38384441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 44942520 - 44942453
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||||||||||| ||| |||||| |||||||||||  |||||||||||||||  ||||||||||    
T  44942520 attgatcggatttgcacttgctcaaagctaatctttcaagctgaatcaaataaacaccgcactaagac 44942453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 12994120 - 12994166
Alignment:
Q  89 tcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  12994120 tcaaagctaatctttcaactagaatcaaataaacattgcactaagac 12994166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 33012281 - 33012215
Alignment:
Q  69 ttgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||||||| ||| |||||| |||||||||||| ||||| |||||||||  ||||||||||    
T  33012281 ttgatcggatttgcacttgatcaaagctaatctttcaacctgaattaaataaacaccgcactaagac 33012215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 7072780 - 7072932
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    |||||||||||||||||||  ||| |||||| |||| ||||||||||| ||||      || ||||||||| ||  |||||  |||| |||| || ||||    
T  7072780 atgactatattcatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgattggatttgcacttcctcaaaactaatatttcgacctgaa 7072879  T
Q  113 tcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||||||||  |||||||||||| | |||||| ||||| || || ||||||    
T  7072880 tcaaataaacaccgcactaagacaggaaataaaaaacacaccgcacaaagacg 7072932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 9978511 - 9978623
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaa------gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 122  Q
    |||||||||  ||| |||||| ||||||||||||||      || |||||| |||| |||| ||| |||||| |||||||||||| ||||||||||||||    
T  9978511 tcatgtctccggatctgcaacgttgatgacgccaaaatcattgtcattgattggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaac 9978610  T
Q  123 attgcactaagac 135  Q
    |  ||||||||||    
T  9978611 accgcactaagac 9978623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 43696102 - 43696033
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 137  Q
    ||||||| ||| |||| |||||||||| |||| ||||||| |||||||||||||||  ||||||||||||    
T  43696102 attgatcagatctgcacttgttcaaagctaatttttcaacctgaatcaaataaacaccgcactaagacag 43696033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 22597369 - 22597285
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 152  Q
    ||||||||||  |||| ||| |||||| |||||||||||| |||||||||||||||  |||||||||| | | |||||| |||||    
T  22597369 attgatcggacctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgggaaataaaaaacaca 22597285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 35333739 - 35333655
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 152  Q
    ||||||||||| | || ||| |||||| |||||||||||| |||||||||||||||  |||||||||| | | |||||| |||||    
T  35333739 attgatcggatctacacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggaaaataaaaaacaca 35333655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 135
Target Start/End: Original strand, 4426549 - 4426612
Alignment:
Q  72 atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  4426549 atcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 4426612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 4739563 - 4739496
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||  ||||||||||    
T  4739563 attgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacaccgcactaagac 4739496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 11426901 - 11426814
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcacta 131  Q
    ||||||||||| |||| |||||| || |||  ||| |||| ||| |||||| |||||||||||||||||| ||||||| || ||||||    
T  11426901 tgcaacattgacgacgtcaaagtgatcgattagatctgcaattgctcaaagctaatctttcaacttgaatgaaataaatatcgcacta 11426814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 12891005 - 12891060
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||    
T  12891005 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 12891060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 17767408 - 17767499
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataa 120  Q
    |||||||||  ||| |||||| |||| |||||  |||| ||||||||||| |||| ||| ||||||||||||||| ||| | ||||||||||    
T  17767408 tcatgtctccggatctgcaacgttgacgacgcagaagtcattgatcggatctgcacttgctcaaagttaatcttttaacctaaatcaaataa 17767499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 27095940 - 27095877
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcacta 131  Q
    |||||||||||  | | ||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  27095940 attgatcggatcagtacttgctcaaagctaatctttcaacttgaatcaaataaacatcgcacta 27095877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 32015487 - 32015420
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||| | ||||||||    
T  32015487 attgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacatcgtactaagac 32015420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 8781768 - 8781718
Alignment:
Q  86 tgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagaca 136  Q
    ||||||||| |||||||| |||||||||||||||||||  |||||||||||    
T  8781768 tgttcaaagctaatcttttaacttgaatcaaataaacaccgcactaagaca 8781718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 26254834 - 26254919
Alignment:
Q  79 ttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||| ||| ||||||||||||||||||| | |||||||||||||  ||||||||||| || || ||| |||||||| || ||||||    
T  26254834 ttgcacttgctcaaagttaatctttcaacctaaatcaaataaacaccgcactaagacaata-attaaaaacacatcgcactaagacg 26254919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 29543071 - 29542974
Alignment:
Q  30 catgtctcttgatgtgcaacattgatgacgccaaa------gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaa 121  Q
    ||||||||  ||| |||||| ||||||||||||||      || |||||||||||||||| ||| |||||| |||| ||||||| |||||||||||||    
T  29543071 catgtctccggatctgcaacgttgatgacgccaaaatcattgtcattgatcggatttgcacttgctcaaagctaatttttcaacctgaatcaaataaa 29542974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 45694290 - 45694388
Alignment:
Q  25 atattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||||   ||| |||||| |||| ||||  ||||| ||||||  ||| |||||||| |||||| |||||||||||| ||| |||||||||||    
T  45694290 atattcatgtcttcggatctgcaacgttgacgacgttaaagtcattgattagatctgcatttgctcaaagataatctttcaacatgagtcaaataaaca 45694388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 134
Target Start/End: Original strand, 7581931 - 7582040
Alignment:
Q  25 atattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 124  Q
    ||||||||||||   ||| | |||| |||| |||| ||||||  ||||| | ||||||| ||| |||||| |||| ||||||| ||||||||||||||||    
T  7581931 atattcatgtcttcggatctacaacgttgacgacgtcaaagtcgttgattgaatttgcacttgctcaaagataatatttcaacctgaatcaaataaacat 7582030  T
Q  125 tgcactaaga 134  Q
     ||| |||||    
T  7582031 ggcattaaga 7582040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 25068069 - 25067989
Alignment:
Q  84 tttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||||||||||| |||||||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  25068069 tttgttcaaagctaatctttcaacctgaatcaaataaaca-cgcactaagacgggaaataaaaaacacaccgcacaaagacg 25067989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 27666461 - 27666360
Alignment:
Q  51 ttgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagaca 150  Q
    |||||||||| ||||| |||||| | || |||| ||  ||||| ||||||||| ||| |||||||||||||||  |||||||||| | | |||||| |||    
T  27666461 ttgatgacgcaaaagtcattgattgaatatgcacttcatcaaaattaatcttttaacctgaatcaaataaacaccgcactaagacgggaaataaaaaaca 27666362  T
Q  151 ca 152  Q
    ||    
T  27666361 ca 27666360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 31908704 - 31908772
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 137  Q
    ||||||||||| |||| ||| |||||| ||| |||||||| |||||||||||||||  ||||||||||||    
T  31908704 attgatcggatctgcacttgctcaaagctaa-ctttcaacctgaatcaaataaacaccgcactaagacag 31908772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 4604194 - 4604278
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 152  Q
    ||||||||||| |||| ||| |||||| || ||||||||| |||||||||||||||   ||||||||| | | |||||| |||||    
T  4604194 attgatcggatctgcacttgctcaaagctagtctttcaacctgaatcaaataaacaccacactaagacgggaaataaaaaacaca 4604278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 6593450 - 6593372
Alignment:
Q  89 tcaaagttaatctttcaacttgaatcaaataaacattg---cactaagacagtatataaaagacacatcgtacgaagac 164  Q
    |||||||||||| |||||||||||||||||||||||     ||||||||||| | ||||||  |||||||||| |||||    
T  6593450 tcaaagttaatcattcaacttgaatcaaataaacataataccactaagacagaaaataaaaagcacatcgtacaaagac 6593372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 12704921 - 12704837
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 152  Q
    ||||||| ||| |||| ||| |||||| |||||||||||| | |||||||||||||  |||||||||| | | |||||| |||||    
T  12704921 attgatctgatatgcacttgctcaaagctaatctttcaacctaaatcaaataaacaccgcactaagacgggaaataaaaaacaca 12704837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 34416650 - 34416702
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataa 120  Q
    ||||||||||| |||| ||| |||||| |||||||||||| ||||||||||||    
T  34416650 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataa 34416702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 38233812 - 38233720
Alignment:
Q  60 ccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 152  Q
    ||||||| |||||| | |||| |||||| |||||| |||||||||||  | ||||||||||||| | ||| ||||||  |||||||| |||||    
T  38233812 ccaaagtcattgattgtatttacatttgatcaaaggtaatctttcaatctaaatcaaataaacactacacaaagacaagatataaaaaacaca 38233720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 13548782 - 13548841
Alignment:
Q  62 aaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaa 121  Q
    ||||| |||||| | || |||||||| |||||| |||||||||||| |||||||||||||    
T  13548782 aaagtcattgattgaatctgcatttgatcaaagctaatctttcaacctgaatcaaataaa 13548841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 34962963 - 34963030
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||| |||| |||| ||| |||||  |||||||||||| |||||||||||||||  ||||||||||    
T  34962963 attgataggatctgcacttgctcaaatctaatctttcaacctgaatcaaataaacaccgcactaagac 34963030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 36080781 - 36080702
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||||||  ||||||| ||| || |||||| || ||| |||||  || |||||||| ||||||||||||||||    
T  36080781 tgcaacattgatgaaaccaaagtcattaattggatttacacttgatcaaaactactctttcaatttgaatcaaataaaca 36080702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 8531425 - 8531515
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    |||||| ||||||||  |||| | |||||| | ||||||| ||| | ||||||| ||||| ||| |||||||||||||||  |||||||||    
T  8531425 tgcaacgttgatgacatcaaattcattgattgaatttgcacttgattaaagttattctttaaacatgaatcaaataaacaccgcactaaga 8531515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 17792714 - 17792640
Alignment:
Q  62 aaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagaca 136  Q
    ||||| |||||| | || |||||||| |||||  |||||||||||| ||||||||||||||| || | |||||||    
T  17792714 aaagtcattgattgaatctgcatttgatcaaaactaatctttcaacatgaatcaaataaacactgtattaagaca 17792640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 20561019 - 20561085
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    ||||||||||| | |  ||| |||||| |||||||||||| |||||||||||||||  |||||||||    
T  20561019 attgatcggatctactcttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaaga 20561085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 38535204 - 38535289
Alignment:
Q  80 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||| ||| |||||| |||||||||||| |||||||||||||||  |||||| ||| | | |||||| ||||| || || ||||||    
T  38535204 tgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaggacgggaaataaaaaacacaccgcacaaagacg 38535289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 135
Target Start/End: Original strand, 3204684 - 3204747
Alignment:
Q  72 atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||| |||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  3204684 atcggatatgcacttgctcaaagttaatctttcaacttgaatcaaataaacactgcactaagac 3204747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 4757454 - 4757332
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    ||||||||||||| |||||  ||| |||||| |||| ||||||||||| ||||      ||||||| |||| ||| |||||| |||||||||||| ||||    
T  4757454 atgactatattcaagtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaa 4757355  T
Q  113 tcaaataaacattgcactaagac 135  Q
    |||||||||||| ||||||||||    
T  4757354 tcaaataaacatcgcactaagac 4757332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 37612942 - 37612820
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    |||||||||||||||| ||  ||| |||||| |||| ||||||||||| ||||      ||||||| |||| ||| |||||| |||||||||||||||||    
T  37612942 atgactatattcatgtatccggatctgcaacgttgaagacgccaaagtcattgtcattgatcggatctgcaattgctcaaagctaatctttcaacttgaa 37612843  T
Q  113 tcaaataaacattgcactaagac 135  Q
    |||||||||||  ||||||||||    
T  37612842 tcaaataaacaccgcactaagac 37612820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 10334449 - 10334343
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 128  Q
    |||||||||  ||| |||||| |||| || |||||||| ||||||||||| |||||||| |||||| |||| ||||||  |||||||||||||||  |||    
T  10334449 tcatgtctccggatctgcaacgttgacgatgccaaagtcattgatcggatctgcatttgctcaaagctaatatttcaatctgaatcaaataaacaccgca 10334350  T
Q  129 ctaagac 135  Q
    |||||||    
T  10334349 ctaagac 10334343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 32778813 - 32778907
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||||||  ||| |||||  |||| ||||| ||||| ||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||    
T  32778813 tcatgtctccagatctgcaaagttgacgacgcaaaagtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaaca 32778907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 10338714 - 10338803
Alignment:
Q  65 gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatc 154  Q
    |||||||||||||| |||| ||| |||||| |||| |||||||||||||||||||||||  |||||||||| | | |||||| |||||||    
T  10338714 gttattgatcggatctgcacttgctcaaagctaatttttcaacttgaatcaaataaacaccgcactaagacgggaaataaaaaacacatc 10338803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 31202692 - 31202595
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||| ||| |||| ||| ||||||||||||||||||| ||||||||||||||| ||||||||||| | | || ||| ||||| ||||| ||||||    
T  31202692 attgatcagatctgcacttgatcaaagttaatctttcaacctgaatcaaataaacactgcactaagactggaaatcaaaaacacaccgtacaaagacg 31202595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 31407643 - 31407740
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  |||||||||||| | || ||| |||||||| || ||||||    
T  31407643 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacaggaaatcaaaaacacatcgcacaaagacg 31407740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 13576065 - 13576173
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatata 143  Q
    ||||||||||| || ||||||||  |||||||||| |||| ||| ||||||||||||||||||  |||||| ||||||||  |||||||||| | | |||    
T  13576065 tgcaacattgaagatgccaaagtcgttgatcggatctgcacttgctcaaagttaatctttcaatctgaatctaataaacaccgcactaagacggaaaata 13576164  T
Q  144 aaagacaca 152  Q
    ||| |||||    
T  13576165 aaaaacaca 13576173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 24700066 - 24700002
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaa 132  Q
    ||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||  |||||||    
T  24700066 attgatcggatctgcatttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaa 24700002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 38546048 - 38546116
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagaca 136  Q
    ||||||||||| |||||||| ||||||||||||||||||  |||||||||||||||| | |||||||||    
T  38546048 attgatcggatatgcatttggtcaaagttaatctttcaatctgaatcaaataaacatcgtactaagaca 38546116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 43937072 - 43937139
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||  ||||||||||    
T  43937072 attgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaagac 43937139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 9501820 - 9501723
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||||||||||||| ||| |||||| |||||||||||| |||||||||||||||  |||| ||||| | | |||||| ||| | ||||| ||||||    
T  9501820 attgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcacaaagacgggaaataaaaaacaaaccgtacaaagacg 9501723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 152
Target Start/End: Complemental strand, 2968782 - 2968682
Alignment:
Q  52 tgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacac 151  Q
    ||||||| ||||||| |||||||||||||||| ||| ||||||   |||||||||| ||||||||||||| |  |||||||||| | | |||||| ||||    
T  2968782 tgatgacaccaaagtcattgatcggatttgcacttgctcaaagcggatctttcaacctgaatcaaataaataccgcactaagacggaaaataaaaaacac 2968683  T
Q  152 a 152  Q
    |    
T  2968682 a 2968682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 165
Target Start/End: Original strand, 7579705 - 7579847
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 122  Q
    |||||||||| ||| |||||| |||  ||||||||||| ||||      ||||||| |||| ||| |||||| |||||||||||| ||||||||||||||    
T  7579705 tcatgtctctggatctgcaacgttggcgacgccaaagtcattgtcattaatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaac 7579804  T
Q  123 attgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |  |||||||||| | | |||||| ||||| || || ||||||    
T  7579805 accgcactaagacgggaaataaaaaacacaacgcacaaagacg 7579847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 14600593 - 14600660
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  14600593 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 14600660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 135
Target Start/End: Original strand, 2234362 - 2234432
Alignment:
Q  65 gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||||||||| |||| ||| |||||| |||| ||||||| |||||||||||||||  ||||||||||    
T  2234362 gttattgatcggatctgcacttgctcaaagctaatatttcaacctgaatcaaataaacaccgcactaagac 2234432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 135
Target Start/End: Original strand, 37128379 - 37128449
Alignment:
Q  65 gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||  ||||||||||    
T  37128379 gttattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacaccgcactaagac 37128449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 13570578 - 13570702
Alignment:
Q  18 catgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttga 111  Q
    ||||||||||||||| ||||  ||| |||||| |||| || |||||||| ||||      ||| ||| |||| ||| |||||| ||||||||||||||||    
T  13570578 catgactatattcatatctccggatctgcaacgttgacgatgccaaagtcattgtaattgatcagatctgcacttgctcaaagctaatctttcaacttga 13570677  T
Q  112 atcaaataaacattgcactaagaca 136  Q
    ||||||||||||   ||||||||||    
T  13570678 atcaaataaacaccacactaagaca 13570702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 19489069 - 19489008
Alignment:
Q  62 aaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||| |||||| | ||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  19489069 aaagtcattgattgaatttgcacttgatcaaagttaatctttcaacctgaatcaaataaaca 19489008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 41361966 - 41361869
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||| || | | |||||| ||||| || || ||||||    
T  41361966 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaaaacgggaaataaaaaacacaccgcacaaagacg 41361869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 1810117 - 1810184
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||||| || ||| |||||  |||||||||||| |||||||||||||||| || |||||||    
T  1810117 attgatcggatttacacttgctcaaaactaatctttcaacctgaatcaaataaacatcgcgctaagac 1810184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 2025119 - 2025186
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||| |||||||||||  |||||||||||||||  ||||||||||    
T  2025119 attgatcggatctgcacttgctcaaagctaatctttcaatctgaatcaaataaacaccgcactaagac 2025186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 28297002 - 28297068
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    ||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||  |||||||||    
T  28297002 attgatcggatctgcagttgctcaaatctaatctttcaacctgaatcaaataaacaccgcactaaga 28297068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 39067539 - 39067668
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 122  Q
    |||||||||| ||| |||||| |||  ||||||||||| ||||      ||||||| |||| ||| |||||| |||||||||||| |||||| |||||||    
T  39067539 tcatgtctctggatctgcaacgttggcgacgccaaagtcattgtcatcgatcggatctgcacttgctcaaagctaatctttcaacatgaatctaataaac 39067638  T
Q  123 attgcactaagacagtatataaaagacaca 152  Q
    |  |||||||||| | | |||||| |||||    
T  39067639 accgcactaagacggaaaataaaaaacaca 39067668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 24210473 - 24210408
Alignment:
Q  70 tgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||| | || |||||||||| |||||||||||| ||||||||||||| |  ||||||||||    
T  24210473 tgatcggatctacacttgttcaaagctaatctttcaacctgaatcaaataaataccgcactaagac 24210408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 24791018 - 24791118
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 122  Q
    |||||||||| ||| |||||| |||| ||||||||||| ||||      |||||||||||| ||| |||||  |||||||||||| ||| ||||||||||    
T  24791018 tcatgtctctggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaaactaatctttcaacctgattcaaataaac 24791117  T
Q  123 a 123  Q
    |    
T  24791118 a 24791118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 10952152 - 10952232
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 124  Q
    ||||||||||||||||||||| | ||| || | ||||||| ||| |||||    |||||||||| ||||||||||||||||    
T  10952152 tgcaacattgatgacgccaaaataattaattgaatttgcacttgatcaaatcgtatctttcaacctgaatcaaataaacat 10952232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 10960157 - 10960237
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 124  Q
    ||||||||||||||||||||| | ||| || | ||||||| ||| |||||    |||||||||| ||||||||||||||||    
T  10960157 tgcaacattgatgacgccaaaataattaattgaatttgcacttgatcaaatcgtatctttcaacctgaatcaaataaacat 10960237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 15288667 - 15288719
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg 71  Q
    |||||||||||||||||||| ||| |||||| |||| ||||||||||| ||||    
T  15288667 atgactatattcatgtctctggatttgcaacgttgacgacgccaaagtcattg 15288719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 15469036 - 15469088
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg 71  Q
    |||||||||||||||||||| ||| |||||| |||| ||||||||||| ||||    
T  15469036 atgactatattcatgtctctggatttgcaacgttgacgacgccaaagtcattg 15469088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 10148179 - 10148124
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| ||| |||||| |||| ||||||| |||||||||||||||    
T  10148179 attgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaaca 10148124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 11162117 - 11162062
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||| ||| |||| ||| |||||| |||||||||||| |||||||||||||||    
T  11162117 attgatcagatatgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 11162062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 19720246 - 19720191
Alignment:
Q  65 gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataa 120  Q
    |||||||||||||  |||| ||| |||||| |||||||||||| ||||||||||||    
T  19720246 gttattgatcggacctgcacttgctcaaagctaatctttcaacctgaatcaaataa 19720191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 22787714 - 22787659
Alignment:
Q  80 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||  |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  22787714 tgcatttactcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 22787659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 30026789 - 30026844
Alignment:
Q  80 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  30026789 tgcacttgctcaaagctaatctttcaacatgaatcaaataaacaccgcactaagac 30026844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 12329861 - 12329764
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||| ||| |||||| |||| ||||||| | |||||||||||||  ||| |||||| | | |||||| ||||| || || ||||||    
T  12329861 attgatcggatctgcacttgctcaaagctaatttttcaacctaaatcaaataaacaccgcattaagacgggaaataaaaaacacaccgcacaaagacg 12329764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 22956446 - 22956519
Alignment:
Q  61 caaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    |||||||| |||| |||| | |||||| |||||  |||| ||| ||||||||||||||||| || |||||||||    
T  22956446 caaagttaatgattggatctacatttgatcaaaactaattttttaacttgaatcaaataaatatcgcactaaga 22956519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 20993029 - 20992985
Alignment:
Q  80 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 124  Q
    |||||||| ||||||||||| |||||||  |||||||||||||||    
T  20993029 tgcatttgctcaaagttaatttttcaaccagaatcaaataaacat 20992985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 31308382 - 31308326
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 124  Q
    ||||||||||| |||| |||||||||  || ||||||||| ||||| ||||||||||    
T  31308382 attgatcggatctgcacttgttcaaaactattctttcaacctgaattaaataaacat 31308326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 9298294 - 9298369
Alignment:
Q  59 gccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    |||||||| ||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||  |||||||||    
T  9298294 gccaaagtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaaga 9298369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 13152711 - 13152636
Alignment:
Q  31 atgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaa 106  Q
    |||||||||||| || ||| |||||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||    
T  13152711 atgtctcttgatctgtaacgttgatgacgccaaagtcattgatcggatctgcacttgctcaaagttaatctttcaa 13152636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 33486917 - 33486984
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||  ||||||||||    
T  33486917 attgatcggatttgcatttgctcaaagttaatttttcaacctgaatcaaataaacaccgcactaagac 33486984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 44517381 - 44517314
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||  ||||||||||    
T  44517381 attgatcggatttgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaagac 44517314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 3233077 - 3232937
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    |||||||||||||||||||  ||| |||||| |||| ||| ||||||| ||||      ||||||| |||| ||  |||||| |||||||||||| ||||    
T  3233077 atgactatattcatgtctccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcactttctcaaagctaatctttcaacctgaa 3232978  T
Q  113 tcaaataaacattgcactaagacagtatataaaagacacat 153  Q
    |||||||||||| |||||||||| | | |||||| ||||||    
T  3232977 tcaaataaacatcgcactaagacggaaaataaaaaacacat 3232937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 4882246 - 4882315
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 137  Q
    ||||||||||| |||| ||| |||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  4882246 attgatcggatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcactaagacag 4882315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 12871894 - 12871789
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 128  Q
    |||||||||| ||| |||||| |||| || |||||||| |||||||| || |||| ||| |||||| |||||||||||| | |||||||||||||  |||    
T  12871894 tcatgtctctggatctgcaacgttgacgatgccaaagtcattgatcgaatctgcacttgctcaaagctaatctttcaacctaaatcaaataaacaacgca 12871795  T
Q  129 ctaaga 134  Q
    ||||||    
T  12871794 ctaaga 12871789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 8737601 - 8737517
Alignment:
Q  51 ttgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||| ||||| |||||||| |||| |||| ||  |||||| |||||||||||| ||||||||||||||| |||||||||||    
T  8737601 ttgatgacaccaaaattattgattggatctgcacttactcaaagctaatctttcaacctgaatcaaataaacactgcactaagac 8737517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 14265518 - 14265451
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||| ||||||||||    
T  14265518 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgcactaagac 14265451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 31427015 - 31427098
Alignment:
Q  46 caacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcac 129  Q
    |||| |||| ||||| |||||||||||| | | ||||| ||| ||||||||||||||||||| ||||||||||||||| |||||    
T  31427015 caacgttgacgacgcaaaagttattgattgaagttgcacttgatcaaagttaatctttcaacctgaatcaaataaacactgcac 31427098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 32878981 - 32878887
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||||||  ||| | |||| |||| ||| ||||||| ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||    
T  32878981 tcatgtctccggatctacaacgttgacgacaccaaagtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 32878887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 3101941 - 3101836
Alignment:
Q  28 ttcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgc 127  Q
    |||||||||||  || |||||  |||| ||||||||||| ||| || | || |||| ||| ||||||||||| |||||||| ||||||||||||||| ||    
T  3101941 ttcatgtctctgaatctgcaatgttgacgacgccaaagtcattaattgaatatgcacttgctcaaagttaatatttcaactcgaatcaaataaacatcgc 3101842  T
Q  128 actaag 133  Q
    ||||||    
T  3101841 actaag 3101836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 13999210 - 13999133
Alignment:
Q  58 cgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||| |||||| | || |||||||| |||||||||||||| |||| |||||||||||||||| | ||||||||    
T  13999210 cgccaaagtcattgattgaatctgcatttgctcaaagttaatcttacaacctgaatcaaataaacatcgtactaagac 13999133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 25032958 - 25033030
Alignment:
Q  51 ttgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||||||||||||| |||||| | ||||||| ||| |||||||||||||  |||| |||||||||||||||    
T  25032958 ttgatgacgccaaagtcattgattgaatttgcacttgctcaaagttaatctcacaacctgaatcaaataaaca 25033030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 7995392 - 7995502
Alignment:
Q  19 atgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaa 112  Q
    |||||||||||||||||||   || |||||| |||| ||||||||||| ||||      ||||||| |||| ||| |||||| |||||||||||| ||||    
T  7995392 atgactatattcatgtctcagaatctgcaacgttgacgacgccaaagtcattgtcattgatcggatatgcacttgctcaaagctaatctttcaacctgaa 7995491  T
Q  113 tcaaataaaca 123  Q
    |||||||||||    
T  7995492 tcaaataaaca 7995502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 15391139 - 15391206
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  15391139 attgatcggatatgcacttgctcaaagataatctttcaacctgaatcaaataaacaccgcactaagac 15391206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 42491151 - 42491060
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| || ||||||| ||| |||| ||| |||||| |||||||||||  |||||||||||||||  ||||||||||    
T  42491151 tgcaacattgacgacgtcaacgtcattgatctgatctgcacttgctcaaagctaatctttcaatctgaatcaaataaacaccgcactaagac 42491060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 27534934 - 27534864
Alignment:
Q  65 gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||||| ||| |||  |||||||||| |||||||||||| ||||||||||||||||  |||||||||    
T  27534934 gttattgatcagatctgctcttgttcaaagctaatctttcaacctgaatcaaataaacatcacactaagac 27534864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 32784316 - 32784246
Alignment:
Q  65 gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| ||||||| ||| |||||| |||||||||| | |||||||||||||||  ||||||||||    
T  32784316 gttattgatcgaatttgcacttgctcaaagctaatctttcagcctgaatcaaataaacaccgcactaagac 32784246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 133
Target Start/End: Original strand, 15791170 - 15791227
Alignment:
Q  76 gatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaag 133  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||||  ||||||||    
T  15791170 gatttgcatttcttcaaagctaatctttcaacctgaatcaaataaacaccgcactaag 15791227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 45750757 - 45750645
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 122  Q
    |||||||||  ||| |||||| |||||||||||||||| ||||      ||||||| |||| ||| | |||| |||||||||||| ||||||||||||||    
T  45750757 tcatgtctccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctgcacttgctaaaagctaatctttcaacctgaatcaaataaac 45750658  T
Q  123 attgcactaagac 135  Q
    |  ||||||||||    
T  45750657 accgcactaagac 45750645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 13488423 - 13488490
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||  |||||||||| |||||||||||| ||||| |||||||||  ||||||||||    
T  13488423 attgatcggatctgctcttgttcaaagctaatctttcaacctgaattaaataaacaccgcactaagac 13488490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 37822233 - 37822299
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||| ||| ||||||| ||||||||||| ||||||||||||| | |||||||||||    
T  37822233 attgatcggatctgcacttgctcaaagt-aatctttcaacctgaatcaaataaatactgcactaagac 37822299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 51418218 - 51418163
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||||||||||||| ||| |||||| ||||||||| || |||||||||||||||    
T  51418218 attgatcggatttgcacttgctcaaagctaatctttccacctgaatcaaataaaca 51418163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 42276589 - 42276523
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    ||||||||||| |||| ||| | |||| |||||||||||| |||||||||||||||  |||||||||    
T  42276589 attgatcggatctgcacttgcttaaagctaatctttcaacctgaatcaaataaacaccgcactaaga 42276523  T

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Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 40862667 - 40862772
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 128  Q
    |||||||||| ||| |||||| |||| ||||||||| | |||||| | |||| ||  || |||||  |||||||||||  |||||||||||||||| ||     
T  40862667 tcatgtctctggatctgcaacgttgacgacgccaaaatcattgattgcatttacacctgatcaaaactaatctttcaatctgaatcaaataaacatcgct 40862766  T
Q  129 ctaaga 134  Q
    ||||||    
T  40862767 ctaaga 40862772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 165
Target Start/End: Complemental strand, 10782714 - 10782638
Alignment:
Q  89 tcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||||||||||||||||   ||||||||||||||| ||||||||||  | |||||| ||||| || || ||||||    
T  10782714 tcaaagttaatctttcaaccaaaatcaaataaacattacactaagacaagaaataaaaaacacaccgcacaaagacg 10782638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 47551353 - 47551245
Alignment:
Q  44 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatata 143  Q
    |||||| |||| |||| |||||| |||||| |||| |||| ||| |||||| |||||||||||| | |||||| ||||||  ||||| |||| | | |||    
T  47551353 tgcaacgttgacgacgtcaaagtcattgattggatctgcacttgctcaaagctaatctttcaacctaaatcaattaaacacagcactgagacgggaaata 47551254  T
Q  144 aaagacaca 152  Q
    ||| |||||    
T  47551253 aaaaacaca 47551245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 424178 - 424265
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcg 155  Q
    |||||||| || |||| |||| |||||||||||||||||| |  ||||||||||||  | |||||||| | | |||||| ||||||||    
T  424178 attgatcgaatctgcacttgtgcaaagttaatctttcaacctagatcaaataaacaccgtactaagacggaaaataaaaaacacatcg 424265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 17347831 - 17347764
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||||| || |||| ||  |||||| |||||||||||| | ||||||||||||| |||||||||||    
T  17347831 attgatcgaatctgcacttactcaaagctaatctttcaaccttaatcaaataaacactgcactaagac 17347764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 18343846 - 18343780
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| |||  |||||||||| |||||||||||| |||||| ||||||||  ||||||||||    
T  18343846 attgatcggatctgctcttgttcaaagctaatctttcaacctgaatc-aataaacaccgcactaagac 18343780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 28678017 - 28678072
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| ||| |||||| |||| ||||||| |||||||||||||||    
T  28678017 attgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaaca 28678072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 4870920 - 4870986
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    ||||||||||| |||| ||| |||||| |||| ||||||  |||||||||||||||  |||||||||    
T  4870920 attgatcggatctgcacttgctcaaagctaatttttcaatctgaatcaaataaacaccgcactaaga 4870986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 20411785 - 20411739
Alignment:
Q  89 tcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  20411785 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 20411739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 24114594 - 24114632
Alignment:
Q  96 taatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  24114594 taatctttcaacttgaatcaaataaacatcgcattaaga 24114632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 28399210 - 28399300
Alignment:
Q  62 aaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 152  Q
    ||||| |||||| |||| |||| ||| |||||| |||| ||||||| ||||||||||||| |  ||| |||||||| | |||||| |||||    
T  28399210 aaagtcattgattggatctgcacttgctcaaagctaatatttcaacatgaatcaaataaataccgcattaagacaggaaataaaaaacaca 28399300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 29938510 - 29938417
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||||||||  ||| |||||| ||||| |||||||||| |||||| |||| |||| ||| |||| | || ||||||||| | |||||||||||||    
T  29938510 tcatgtctccggatttgcaacgttgataacgccaaagtcattgattggatctgcacttgatcaa-gctattctttcaacataaatcaaataaaca 29938417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 10627233 - 10627137
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| |||| ||| |||||| ||||||| |||| |||||||||||||||  |||||| ||| | | |||||| ||||| || || ||||||    
T  10627233 attgatcggatctgcacttgctcaaagctaatctt-caacctgaatcaaataaacaccgcactatgacggaaaataaaaaacacaccgcacaaagacg 10627137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 46930341 - 46930276
Alignment:
Q  56 gacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaa 121  Q
    |||| |||||||||| || | ||||| | |||||| |||||||||||||||| | |||||||||||    
T  46930341 gacgtcaaagttattaattgaatttgtacttgttcgaagttaatctttcaacataaatcaaataaa 46930276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 29069711 - 29069783
Alignment:
Q  51 ttgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||| |||| |||||| |||||| | || |||| ||| ||||| ||||||||||||  |||||||||||||||    
T  29069711 ttgaagacgtcaaagtcattgattgaatatgcacttgatcaaaattaatctttcaatctgaatcaaataaaca 29069783  T

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Target: scaffold0999 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 1975 - 1900
Alignment:
Q  31 atgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaa 106  Q
    |||||||| ||| |||||| |||||||||||||||| ||||||||||| |||| ||| |||||| |||||||||||    
T  1975 atgtctctcgatctgcaacgttgatgacgccaaagtcattgatcggatctgcacttgctcaaagctaatctttcaa 1900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 13132 - 13229
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    |||||||||||||||| ||| |||||| |||||||||||| |||||||||||||||   ||||||||| | | |||||| ||||| || || ||||||    
T  13132 attgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacacctcactaagacgggaaataaaaaacacaccgcacaaagacg 13229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 4033 - 3961
Alignment:
Q  51 ttgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    |||| |||||||||||||||||| |||| |||| ||| |||||| |||||||| || ||||||||||||||||    
T  4033 ttgacgacgccaaagttattgattggatctgcacttgatcaaagataatcttttaatttgaatcaaataaaca 3961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 931 - 1034
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 128  Q
    |||||||||  ||| |||||| |||||||| ||||||| |||||||| || |||| ||  |||||| |||||||||||| ||||||||||| |||  |||    
T  931 tcatgtctccggatctgcaacgttgatgacaccaaagtcattgatcgaatctgcagtttctcaaagctaatctttcaacctgaatcaaatatacaccgca 1030  T
Q  129 ctaa 132  Q
    ||||    
T  1031 ctaa 1034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 197 - 143
Alignment:
Q  80 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 134  Q
    |||| ||| |||||| |||||||||||| |||||||||||||||  |||||||||    
T  197 tgcacttgctcaaagctaatctttcaacctgaatcaaataaacacagcactaaga 143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 3134 - 3079
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 123  Q
    ||||||||||| |||| |||||||||| |||||||||||| |||||||||||||||    
T  3134 attgatcggatctgcacttgttcaaagctaatctttcaacctgaatcaaataaaca 3079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 1808 - 1711
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 165  Q
    ||||||||||| || | ||| |||||| |||||||||||| |||||||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  1808 attgatcggatctgtacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgggaaataaaaaacacaccgcactaagacg 1711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 6972 - 7078
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 128  Q
    |||||||||  ||| |||||| || | ||||||||||| ||||||||||| |||| ||| || ||| |||||||| |||  |||| ||||||||| ||||    
T  6972 tcatgtctccggatctgcaacgttaacgacgccaaagtcattgatcggatctgcacttgctccaagctaatcttttaacccgaattaaataaacactgca 7071  T
Q  129 ctaagac 135  Q
    || ||||    
T  7072 cttagac 7078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 74398 - 74344
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 122  Q
    ||||||||||| |||| ||| |||||| |||||||||||| ||||||||||||||    
T  74398 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaac 74344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 6371 - 6284
Alignment:
Q  68 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcg 155  Q
    |||||||| || |||| |||| |||||||||||||||||| |  ||||||||||||  | |||||||| | | |||||| ||||||||    
T  6371 attgatcgaatctgcacttgtgcaaagttaatctttcaacctagatcaaataaacaccgtactaagacggaaaataaaaaacacatcg 6284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 201927 - 201994
Alignment:
Q  57 acgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 124  Q
    |||||||| | |||||| | |||| || |||||||||| |||| ||||||| ||||||||||||||||    
T  201927 acgccaaaatcattgattgaattttcacttgttcaaagctaatatttcaacctgaatcaaataaacat 201994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 2284 - 2338
Alignment:
Q  29 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgca 83  Q
    |||||||||  ||| ||||||||||| ||||||||||| ||||||||||| ||||    
T  2284 tcatgtctccggatctgcaacattgacgacgccaaagtcattgatcggatctgca 2338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 35313 - 35251
Alignment:
Q  73 tcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 135  Q
    ||||||||||| ||| |||||| |||| ||||||| | |||||||||||||  ||||||||||    
T  35313 tcggatttgcacttgctcaaagctaatatttcaacctaaatcaaataaacaccgcactaagac 35251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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