View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17473_high_32 (Length: 286)
Name: NF17473_high_32
Description: NF17473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17473_high_32 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 13 - 271
Target Start/End: Original strand, 40505894 - 40506152
Alignment:
| Q |
13 |
aatataaaagttagaccttactaaaattattgatggagtgaatatgtttgttcgtcctcaaatttataccaattgatcaattttgtccttccatttttca |
112 |
Q |
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| T |
40505894 |
aatataaaagttagaccttactaaaattattgatggagtgaatatgtttgttcctcctcaaatttataccaattgatcaattttgttcttccatttttca |
40505993 |
T |
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| Q |
113 |
aattagaaaaattgtcatccaatttgtttcacatttatcaaatgagttattctatcatgtttatatgttggacacgctgacaagcaatgttaaaggctga |
212 |
Q |
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|||||||||||| ||||| |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||| |||||||||||||||||||||| |
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| T |
40505994 |
aattagaaaaatcgtcattcaatttgtttcacatttatcaaatgagttattatgtcatgtttagatgttggacacgcggacaagcaatgttaaaggctga |
40506093 |
T |
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| Q |
213 |
tgtgttggtccatgtcacatgccatgtagaaaggaaccaatttgcttgaatttctttct |
271 |
Q |
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| T |
40506094 |
tatgttcgtccatgtcacatgccatgtagaaaggaaccaatttgcttgaatttctttct |
40506152 |
T |
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