View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17473_low_26 (Length: 356)

Name: NF17473_low_26
Description: NF17473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17473_low_26
NF17473_low_26
[»] chr7 (43 HSPs)
chr7 (18-340)||(18063469-18063792)
chr7 (98-285)||(20393693-20393885)
chr7 (102-159)||(18127333-18127390)
chr7 (97-238)||(48093984-48094125)
chr7 (97-145)||(33655213-33655261)
chr7 (97-159)||(23116351-23116413)
chr7 (97-145)||(22163214-22163262)
chr7 (97-145)||(22221922-22221970)
chr7 (97-145)||(41497062-41497110)
chr7 (97-216)||(24970199-24970318)
chr7 (97-144)||(17852962-17853009)
chr7 (97-144)||(19261945-19261992)
chr7 (98-144)||(33519140-33519186)
chr7 (97-166)||(34235091-34235160)
chr7 (97-140)||(39855975-39856018)
chr7 (97-140)||(40196642-40196685)
chr7 (97-143)||(1051605-1051651)
chr7 (100-154)||(7791813-7791867)
chr7 (98-144)||(12670942-12670988)
chr7 (98-140)||(28074213-28074255)
chr7 (97-131)||(34228437-34228471)
chr7 (105-143)||(37417740-37417778)
chr7 (106-144)||(37562736-37562774)
chr7 (97-151)||(48152071-48152124)
chr7 (97-154)||(16833786-16833843)
chr7 (97-141)||(3143571-3143615)
chr7 (97-145)||(4833636-4833684)
chr7 (97-145)||(13425225-13425273)
chr7 (97-141)||(25887283-25887327)
chr7 (97-145)||(40572339-40572387)
chr7 (97-145)||(43230327-43230375)
chr7 (97-144)||(21857438-21857485)
chr7 (97-144)||(33519401-33519448)
chr7 (97-151)||(26365859-26365913)
chr7 (104-150)||(31571568-31571614)
chr7 (98-144)||(48015299-48015345)
chr7 (98-151)||(30891094-30891147)
chr7 (97-145)||(41008274-41008320)
chr7 (113-145)||(18231693-18231725)
chr7 (97-141)||(21058962-21059006)
chr7 (97-145)||(29814376-29814424)
chr7 (97-141)||(36267662-36267706)
chr7 (97-141)||(44040848-44040892)
[»] chr4 (53 HSPs)
chr4 (97-151)||(37711234-37711288)
chr4 (97-145)||(27735836-27735884)
chr4 (97-204)||(55510261-55510366)
chr4 (98-151)||(17938206-17938259)
chr4 (97-145)||(5730935-5730983)
chr4 (97-145)||(26167028-26167076)
chr4 (97-145)||(35248777-35248825)
chr4 (97-145)||(36151667-36151715)
chr4 (97-145)||(46007806-46007854)
chr4 (97-151)||(6891451-6891505)
chr4 (97-141)||(45132610-45132654)
chr4 (97-145)||(45741981-45742029)
chr4 (97-145)||(56135840-56135888)
chr4 (102-145)||(41227576-41227619)
chr4 (97-144)||(43961501-43961548)
chr4 (97-151)||(47433808-47433861)
chr4 (97-145)||(1968464-1968512)
chr4 (97-145)||(2917068-2917116)
chr4 (97-145)||(16400891-16400939)
chr4 (97-141)||(17182594-17182638)
chr4 (99-135)||(21695004-21695040)
chr4 (97-145)||(54320525-54320573)
chr4 (98-141)||(11842399-11842442)
chr4 (97-144)||(14539363-14539410)
chr4 (97-144)||(18516577-18516624)
chr4 (101-204)||(44784087-44784189)
chr4 (97-144)||(47846161-47846208)
chr4 (101-144)||(54745011-54745054)
chr4 (97-141)||(54935159-54935204)
chr4 (97-145)||(31348426-31348474)
chr4 (97-145)||(34108331-34108379)
chr4 (97-145)||(41174436-41174484)
chr4 (97-144)||(4437531-4437578)
chr4 (101-144)||(7977602-7977645)
chr4 (97-144)||(22186810-22186857)
chr4 (101-144)||(29798379-29798422)
chr4 (97-144)||(34995142-34995189)
chr4 (97-144)||(47694440-47694487)
chr4 (101-144)||(54761096-54761139)
chr4 (97-144)||(55080670-55080717)
chr4 (97-139)||(5307098-5307140)
chr4 (107-141)||(22921083-22921117)
chr4 (107-141)||(22970682-22970716)
chr4 (98-132)||(23332652-23332686)
chr4 (115-145)||(54001208-54001238)
chr4 (97-131)||(54494729-54494763)
chr4 (98-144)||(56427006-56427052)
chr4 (99-144)||(37761557-37761602)
chr4 (97-138)||(38702716-38702757)
chr4 (101-145)||(23813196-23813240)
chr4 (101-137)||(28332899-28332935)
chr4 (98-142)||(33224945-33224989)
chr4 (97-145)||(49735573-49735621)
[»] chr8 (49 HSPs)
chr8 (98-159)||(24243138-24243199)
chr8 (97-236)||(1026863-1027002)
chr8 (99-236)||(29358354-29358490)
chr8 (97-145)||(41103611-41103659)
chr8 (97-144)||(30581916-30581963)
chr8 (99-145)||(31738516-31738562)
chr8 (97-159)||(38198140-38198202)
chr8 (97-145)||(11575511-11575559)
chr8 (97-144)||(12022249-12022296)
chr8 (98-144)||(16024246-16024292)
chr8 (97-151)||(37923177-37923231)
chr8 (97-143)||(42650443-42650489)
chr8 (97-166)||(7503038-7503107)
chr8 (103-144)||(27487087-27487128)
chr8 (97-145)||(6315153-6315201)
chr8 (97-145)||(31543177-31543225)
chr8 (97-145)||(36308934-36308982)
chr8 (97-145)||(40990289-40990337)
chr8 (97-141)||(43732778-43732822)
chr8 (97-144)||(26167847-26167894)
chr8 (97-144)||(28083833-28083880)
chr8 (97-140)||(30479827-30479870)
chr8 (97-142)||(4247625-4247670)
chr8 (97-138)||(16653040-16653081)
chr8 (97-145)||(7979231-7979279)
chr8 (97-145)||(11033508-11033556)
chr8 (97-145)||(16838153-16838201)
chr8 (98-138)||(21536981-21537021)
chr8 (98-142)||(27483652-27483696)
chr8 (105-145)||(29691027-29691067)
chr8 (97-141)||(30664452-30664496)
chr8 (97-141)||(34552652-34552696)
chr8 (97-141)||(37032470-37032514)
chr8 (112-159)||(5656188-5656235)
chr8 (97-144)||(9933332-9933379)
chr8 (97-132)||(35694873-35694908)
chr8 (97-144)||(43826423-43826470)
chr8 (114-144)||(22591514-22591544)
chr8 (97-139)||(36042503-36042545)
chr8 (97-154)||(6453275-6453332)
chr8 (99-144)||(9434405-9434450)
chr8 (104-145)||(9718584-9718625)
chr8 (97-146)||(10028201-10028250)
chr8 (99-144)||(30365223-30365268)
chr8 (97-145)||(3726960-3727008)
chr8 (97-145)||(4775678-4775726)
chr8 (102-154)||(4874438-4874490)
chr8 (97-141)||(20472801-20472845)
chr8 (100-144)||(39449398-39449442)
[»] chr6 (38 HSPs)
chr6 (98-145)||(32926737-32926784)
chr6 (97-145)||(4097617-4097665)
chr6 (97-145)||(13583810-13583858)
chr6 (97-144)||(14515562-14515609)
chr6 (97-159)||(5526835-5526897)
chr6 (97-238)||(21606856-21606997)
chr6 (97-145)||(665946-665994)
chr6 (100-168)||(1300714-1300782)
chr6 (105-145)||(10818315-10818355)
chr6 (97-145)||(17155447-17155495)
chr6 (108-151)||(2892942-2892985)
chr6 (97-204)||(4097281-4097388)
chr6 (97-144)||(26318396-26318443)
chr6 (98-145)||(32922437-32922484)
chr6 (97-151)||(2892702-2892756)
chr6 (97-142)||(1395727-1395772)
chr6 (97-134)||(16509371-16509408)
chr6 (97-145)||(1390411-1390458)
chr6 (97-141)||(3841176-3841220)
chr6 (97-145)||(14548711-14548759)
chr6 (97-145)||(19278143-19278191)
chr6 (97-145)||(30487410-30487458)
chr6 (101-144)||(3023607-3023650)
chr6 (97-144)||(14368047-14368094)
chr6 (97-140)||(25468509-25468552)
chr6 (97-151)||(16738095-16738149)
chr6 (112-154)||(23924952-23924994)
chr6 (97-151)||(30850011-30850065)
chr6 (115-144)||(6695067-6695096)
chr6 (97-142)||(29692969-29693014)
chr6 (115-144)||(31799030-31799059)
chr6 (97-145)||(5585407-5585455)
chr6 (97-145)||(12811086-12811133)
chr6 (97-141)||(25741498-25741542)
chr6 (102-142)||(28477076-28477116)
chr6 (97-145)||(31849201-31849249)
chr6 (97-145)||(33236042-33236090)
chr6 (97-145)||(34176426-34176474)
[»] scaffold0006 (1 HSPs)
scaffold0006 (97-159)||(81502-81564)
[»] chr3 (44 HSPs)
chr3 (97-215)||(41110356-41110474)
chr3 (97-145)||(18654705-18654753)
chr3 (97-193)||(45663202-45663297)
chr3 (97-145)||(14898067-14898115)
chr3 (97-145)||(24560308-24560356)
chr3 (97-145)||(27542036-27542084)
chr3 (97-145)||(37237013-37237061)
chr3 (97-137)||(46204977-46205017)
chr3 (97-144)||(16884077-16884124)
chr3 (97-144)||(34641083-34641130)
chr3 (102-145)||(37807176-37807219)
chr3 (97-144)||(42772123-42772170)
chr3 (97-144)||(54996786-54996833)
chr3 (97-151)||(2387859-2387913)
chr3 (97-238)||(21773873-21774014)
chr3 (97-141)||(42699721-42699765)
chr3 (97-145)||(51819230-51819278)
chr3 (97-141)||(25655079-25655125)
chr3 (97-144)||(40858656-40858703)
chr3 (97-168)||(41040032-41040103)
chr3 (97-144)||(44412452-44412499)
chr3 (97-144)||(49815512-49815559)
chr3 (97-154)||(47989061-47989118)
chr3 (97-154)||(47998348-47998405)
chr3 (97-154)||(48007635-48007692)
chr3 (97-161)||(651822-651886)
chr3 (97-145)||(9312576-9312624)
chr3 (97-145)||(16275810-16275858)
chr3 (97-145)||(36569008-36569056)
chr3 (97-144)||(21090177-21090224)
chr3 (97-144)||(24253813-24253860)
chr3 (97-144)||(41414169-41414216)
chr3 (97-144)||(46978518-46978565)
chr3 (97-140)||(48683703-48683746)
chr3 (97-168)||(52185107-52185178)
chr3 (98-144)||(25179986-25180032)
chr3 (97-141)||(10748406-10748450)
chr3 (99-151)||(12790465-12790517)
chr3 (97-141)||(17474315-17474359)
chr3 (97-141)||(26135888-26135932)
chr3 (97-145)||(40463976-40464024)
chr3 (97-141)||(44302942-44302986)
chr3 (105-137)||(46703355-46703387)
chr3 (97-141)||(54574470-54574514)
[»] chr2 (38 HSPs)
chr2 (99-145)||(15224799-15224845)
chr2 (97-145)||(8426976-8427024)
chr2 (97-145)||(37739996-37740044)
chr2 (97-144)||(31795875-31795922)
chr2 (99-166)||(36566935-36567002)
chr2 (97-219)||(39732760-39732882)
chr2 (97-139)||(41778864-41778906)
chr2 (97-154)||(20545800-20545857)
chr2 (97-141)||(887007-887051)
chr2 (97-141)||(16565868-16565912)
chr2 (98-154)||(31928140-31928196)
chr2 (97-161)||(45098260-45098324)
chr2 (97-159)||(35325360-35325422)
chr2 (97-145)||(2241501-2241549)
chr2 (97-145)||(6721727-6721775)
chr2 (97-145)||(12541857-12541905)
chr2 (97-145)||(17379903-17379951)
chr2 (97-145)||(18811419-18811467)
chr2 (97-145)||(23748186-23748234)
chr2 (97-141)||(33265697-33265741)
chr2 (97-145)||(36347646-36347694)
chr2 (97-145)||(39821760-39821808)
chr2 (105-145)||(42316869-42316909)
chr2 (97-141)||(45257398-45257442)
chr2 (97-132)||(7681339-7681374)
chr2 (97-140)||(15085810-15085853)
chr2 (97-144)||(31061450-31061497)
chr2 (97-131)||(40022461-40022495)
chr2 (97-138)||(12751906-12751947)
chr2 (100-144)||(887210-887254)
chr2 (97-141)||(19566930-19566974)
chr2 (98-145)||(9631652-9631699)
chr2 (97-144)||(21502124-21502171)
chr2 (97-136)||(21662323-21662362)
chr2 (102-145)||(34209560-34209603)
chr2 (97-145)||(28262548-28262596)
chr2 (97-141)||(31086596-31086640)
chr2 (97-141)||(32503250-32503294)
[»] chr5 (40 HSPs)
chr5 (97-145)||(4373671-4373719)
chr5 (97-145)||(16938570-16938618)
chr5 (97-145)||(28279581-28279629)
chr5 (97-166)||(36392234-36392303)
chr5 (97-166)||(37551498-37551567)
chr5 (97-166)||(37654328-37654397)
chr5 (97-145)||(10072752-10072800)
chr5 (97-145)||(11756968-11757016)
chr5 (97-168)||(42681544-42681615)
chr5 (97-166)||(26414984-26415053)
chr5 (97-166)||(37606985-37607054)
chr5 (97-166)||(37779194-37779263)
chr5 (97-145)||(9856971-9857019)
chr5 (97-141)||(10476119-10476163)
chr5 (97-145)||(13634802-13634850)
chr5 (98-145)||(9798717-9798764)
chr5 (97-144)||(18855698-18855745)
chr5 (97-144)||(34980901-34980948)
chr5 (97-138)||(10204667-10204708)
chr5 (97-154)||(33424898-33424955)
chr5 (97-154)||(35244004-35244061)
chr5 (99-143)||(2550459-2550503)
chr5 (97-145)||(7544227-7544275)
chr5 (97-145)||(16501895-16501943)
chr5 (97-145)||(17024329-17024377)
chr5 (98-138)||(27110120-27110160)
chr5 (97-145)||(29002311-29002359)
chr5 (97-144)||(1977623-1977670)
chr5 (97-144)||(8551524-8551571)
chr5 (97-144)||(10043115-10043162)
chr5 (97-128)||(20513571-20513602)
chr5 (97-144)||(21581038-21581085)
chr5 (97-144)||(33744299-33744346)
chr5 (98-144)||(12036041-12036087)
chr5 (98-144)||(14684588-14684634)
chr5 (103-145)||(20146971-20147013)
chr5 (97-154)||(2556113-2556170)
chr5 (97-126)||(8502959-8502988)
chr5 (110-138)||(7079769-7079797)
chr5 (97-141)||(40305774-40305818)
[»] chr1 (42 HSPs)
chr1 (97-145)||(40095038-40095086)
chr1 (97-145)||(50744386-50744434)
chr1 (97-144)||(44211011-44211058)
chr1 (97-166)||(32951402-32951471)
chr1 (97-193)||(36285631-36285727)
chr1 (97-145)||(41676370-41676418)
chr1 (97-145)||(49946693-49946741)
chr1 (98-145)||(8529891-8529938)
chr1 (100-215)||(41498498-41498613)
chr1 (97-144)||(51303490-51303537)
chr1 (97-144)||(51582072-51582119)
chr1 (97-151)||(42230629-42230683)
chr1 (97-142)||(1085598-1085643)
chr1 (97-145)||(30010423-30010471)
chr1 (97-145)||(45585790-45585838)
chr1 (97-159)||(49832638-49832697)
chr1 (97-141)||(51597759-51597803)
chr1 (97-144)||(12108086-12108133)
chr1 (97-140)||(25268355-25268398)
chr1 (97-144)||(27739142-27739189)
chr1 (97-144)||(35927904-35927951)
chr1 (97-144)||(42742416-42742463)
chr1 (97-131)||(2859051-2859085)
chr1 (99-141)||(49065548-49065590)
chr1 (97-138)||(2506630-2506671)
chr1 (97-154)||(33643359-33643416)
chr1 (97-141)||(525208-525252)
chr1 (97-145)||(10391963-10392011)
chr1 (99-159)||(17622630-17622690)
chr1 (97-145)||(38509999-38510047)
chr1 (97-141)||(40709401-40709445)
chr1 (97-141)||(50079493-50079537)
chr1 (98-145)||(20607311-20607358)
chr1 (98-141)||(51303685-51303728)
chr1 (107-145)||(7444596-7444634)
chr1 (112-145)||(20576236-20576269)
chr1 (97-130)||(26940963-26940996)
chr1 (97-166)||(35349546-35349615)
chr1 (97-145)||(6563668-6563715)
chr1 (97-145)||(12234101-12234149)
chr1 (98-138)||(40287367-40287407)
chr1 (116-144)||(52711797-52711825)
[»] scaffold0783 (1 HSPs)
scaffold0783 (97-159)||(6001-6063)
[»] scaffold0096 (1 HSPs)
scaffold0096 (97-238)||(6675-6815)
[»] scaffold0262 (1 HSPs)
scaffold0262 (97-145)||(16401-16449)
[»] scaffold0067 (1 HSPs)
scaffold0067 (97-145)||(39292-39343)
[»] scaffold0018 (1 HSPs)
scaffold0018 (97-154)||(69303-69360)
[»] scaffold0294 (1 HSPs)
scaffold0294 (97-145)||(15354-15402)
[»] scaffold0071 (1 HSPs)
scaffold0071 (98-144)||(52977-53023)
[»] scaffold0240 (1 HSPs)
scaffold0240 (106-167)||(17640-17700)
[»] scaffold0341 (1 HSPs)
scaffold0341 (97-145)||(18861-18908)
[»] scaffold0095 (1 HSPs)
scaffold0095 (100-144)||(8241-8285)
[»] scaffold0004 (1 HSPs)
scaffold0004 (105-145)||(100653-100693)


Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 340
Target Start/End: Complemental strand, 18063792 - 18063469
Alignment:
Q  18 tggatgatggtttaaaaggggaagggagtggagaaattactctcttcttttttaaattatggataatataannnnnnnnaaaataaattaagtgtgattg 117  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||        |||||||||||||||||||||    
T  18063792 tggatgatggtttaaaaggggaagggagtggaggaattactcttttcttttttaaattatggataatataattttttt-aaaataaattaagtgtgattg 18063694  T
Q  118 aagtattatatgatcatttatcatgtt----actatttcaagttttcataaaataatatgtagtgttcgtgattaaaaaactaaaagtaaatcatctcct 213  Q
    |||||||||||||||||||||||||||    ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||| ||| |||||||||    
T  18063693 aagtattatatgatcatttatcatgtttgttactatttcaagttttcagaaaacaatatgtagtgttcgtgatttaaaaactaaaaataagtcatctcct 18063594  T
Q  214 cctaaattctcaatccaaacacaccttgtagatgttgtact-ggcaacatattggagatcttatgaagaagaatatatctattggcggaagggtagtgct 312  Q
       |||||||||||||||||| | ||||||||||||||||| |||||||| |||||||||||||||| || |||||||||||||| ||||||||||||||    
T  18063593 ---aaattctcaatccaaacatatcttgtagatgttgtactaggcaacatgttggagatcttatgaaaaataatatatctattggtggaagggtagtgct 18063497  T
Q  313 catttgtttttcatgtgtctgttttcat 340  Q
    ||| ||||||||||||||||||||||||    
T  18063496 catgtgtttttcatgtgtctgttttcat 18063469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 98 - 285
Target Start/End: Original strand, 20393693 - 20393885
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaataatatgtagtgttcgtg-atta---aaaaa 193  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||| ||||   |||||    
T  20393693 aaataaattaagtgtgattgaagtattatatgatcatttataatgttactatttcaagttttcataaaacaatatgtagtgtttgtgaattaattaaaaa 20393792  T
Q  194 ctaaaagtaaatcatctcctcctaaattctcaatccaaacacaccttgtagatgttgtac-tggcaacatattggagatcttatgaagaagaa 285  Q
    |||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||  ||||||||    
T  20393793 ctaaaagtaacttatcccctcctaaattatcaatccaaacacaccttgtagatgttgtacttggcaacatgttttagatcttacaaagaagaa 20393885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 18127390 - 18127333
Alignment:
Q  102 aaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagtttt 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18127390 aaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagtttt 18127333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 238
Target Start/End: Original strand, 48093984 - 48094125
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaataatatgtagtgttcgtgattaaaaaacta 196  Q
    ||||||||||||||||| || |||||||||||||||||||||||| ||| |||||||| | |  | |||| | | | ||| |||||| ||| |||||  |    
T  48093984 aaaataaattaagtgtggttaaagtattatatgatcatttatcattttattatttcaattctataaaaaagattttatagcgttcgtaatttaaaaaaga 48094083  T
Q  197 aaagtaaatcatctcctcctaaattctcaatccaaacacacc 238  Q
    |||||||||| || |||||||||| ||  |||||||||||||    
T  48094084 aaagtaaatcctcccctcctaaatcctacatccaaacacacc 48094125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 33655261 - 33655213
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33655261 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 33655213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 23116413 - 23116351
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagtttt 159  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  23116413 aaaaaaaattaagtgtgattgaagtattatataatcatttatcatgttgctatttcaattttt 23116351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 22163262 - 22163214
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22163262 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtta 22163214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 22221970 - 22221922
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22221970 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtta 22221922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 41497110 - 41497062
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41497110 aaaataaattaagtgtgattgaagaattatatgatcatttatcatgtta 41497062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 24970318 - 24970199
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaataatatgtagtgttcgtgattaaaaaacta 196  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||| ||| | || |||| | |||||| |   |||| | ||| ||| |||||  |    
T  24970318 aaaataaattaagtgtgattgaagtattatatgatcgtttatcaagttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatga 24970219  T
Q  197 aaagtaaatcatctcctcct 216  Q
    ||||||||||||| ||||||    
T  24970218 aaagtaaatcatcccctcct 24970199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 17852962 - 17853009
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||    
T  17852962 aaaataaattaagtgtgattgaggtattatatgatcgtttatcatgtt 17853009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 19261992 - 19261945
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  19261992 aaaataaattaattgtgattgaagtactatatgatcatttatcatgtt 19261945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 33519140 - 33519186
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||    
T  33519140 aaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 33519186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 34235160 - 34235091
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaa 166  Q
    |||||||||||||||||||||||||||||||||||  |||||||| ||| ||| | || |||| ||||||    
T  34235160 aaaataaattaagtgtgattgaagtattatatgattgtttatcatattaatatgttaactttttataaaa 34235091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 39856018 - 39855975
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatca 140  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  39856018 aaaataaattaagtgtgacttaagtattatatgatcatttatca 39855975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 40196685 - 40196642
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatca 140  Q
    |||||||||||||||||||||||||||||||||||  |||||||    
T  40196685 aaaataaattaagtgtgattgaagtattatatgattgtttatca 40196642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 1051651 - 1051605
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgt 143  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||    
T  1051651 aaaataaattaagtgtgattgaagcattatatgattgtttatcatgt 1051605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 154
Target Start/End: Original strand, 7791813 - 7791867
Alignment:
Q  100 ataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaa 154  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||  ||||||||    
T  7791813 ataaattaaatgtgatttaagtattatatgattatttatcatgtttttatttcaa 7791867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 12670988 - 12670942
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||||    
T  12670988 aaatgaattaagtgtttttgaagtattatatgatcatttatcatgtt 12670942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 28074255 - 28074213
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatca 140  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  28074255 aaataaattaagtgtttttgaagtattatatgatcatttatca 28074213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 34228471 - 34228437
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgat 131  Q
    |||||||||||||||||||||||||||||||||||    
T  34228471 aaaataaattaagtgtgattgaagtattatatgat 34228437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 143
Target Start/End: Complemental strand, 37417778 - 37417740
Alignment:
Q  105 ttaagtgtgattgaagtattatatgatcatttatcatgt 143  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  37417778 ttaagtgtgattgaagtattatatgatcgtttatcatgt 37417740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 144
Target Start/End: Original strand, 37562736 - 37562774
Alignment:
Q  106 taagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  37562736 taagtgtgattgaagtattatatgatcaattatcatgtt 37562774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 48152071 - 48152124
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactattt 151  Q
    |||||||||| |||||||||||||||||| |||||||||||| |||||| |||||    
T  48152071 aaaataaatttagtgtgattgaagtatta-atgatcatttattatgttagtattt 48152124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 16833786 - 16833843
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaa 154  Q
    |||| |||||||||||  ||||||||||| ||||||||||||||||||| || |||||    
T  16833786 aaaaaaaattaagtgtttttgaagtattacatgatcatttatcatgttattaattcaa 16833843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 3143571 - 3143615
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||||||||||||| |  |||||||||||||||||||||||||||    
T  3143571 aaaataaattaagtttttttgaagtattatatgatcatttatcat 3143615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 4833684 - 4833636
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||| ||||||| ||||||||||||||  ||||||||||||    
T  4833684 aaaataaattaaatgtgatttaagtattatatgattgtttatcatgtta 4833636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 13425273 - 13425225
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||| |||||||| |||||||  ||||||||||||    
T  13425273 aaaataaattaagtgtgaatgaagtataatatgattgtttatcatgtta 13425225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 25887283 - 25887327
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||    
T  25887283 aaaataaattaagtgtgattggagtattatatgattgtttatcat 25887327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 40572387 - 40572339
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||| |||||| ||||||||||||| | ||||||||||||    
T  40572387 aaaataaattaagcgtgattaaagtattatatgaccttttatcatgtta 40572339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 43230327 - 43230375
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||| |||||||| |||||| |||| ||||||||||||    
T  43230327 aaaataaattaagtgcgattgaagaattatacgatcgtttatcatgtta 43230375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 21857438 - 21857485
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  ||||| |||| |||||||||||||||||||    
T  21857438 aaaataaattaagtgtttttgaaatattgtatgatcatttatcatgtt 21857485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 33519448 - 33519401
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||| |||||||||||||||||||||||||||   ||||||||||||    
T  33519448 aaaattaattaagtgtgattgaagtattatatgcaaatttatcatgtt 33519401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 26365859 - 26365913
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactattt 151  Q
    |||||||| || |||||||||||||||||||||||  ||| |||||||| |||||    
T  26365859 aaaataaactaggtgtgattgaagtattatatgattgtttctcatgttattattt 26365913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 31571614 - 31571568
Alignment:
Q  104 attaagtgtgattgaagtattatatgatcatttatcatgttactatt 150  Q
    ||||||||||||||||||||||||| ||  |||||||||||| ||||    
T  31571614 attaagtgtgattgaagtattatataattgtttatcatgttaatatt 31571568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 48015299 - 48015345
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||||  |||||  |||||||||||||||||||||||    
T  48015299 aaataaattaagtgtttttgaaaaattatatgatcatttatcatgtt 48015345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 30891147 - 30891094
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgttactattt 151  Q
    ||||||||||| ||||||||||||||||||| ||| ||||| || ||| |||||    
T  30891147 aaataaattaaatgtgattgaagtattatattatcgtttattatattaatattt 30891094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 41008274 - 41008320
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||||||  |||||||||  ||||||||||||    
T  41008274 aaaataaattaagtgtgattgaag--ttatatgattgtttatcatgtta 41008320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 145
Target Start/End: Original strand, 18231693 - 18231725
Alignment:
Q  113 gattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||| ||||||||||||    
T  18231693 gattgaagtattatatgatcgtttatcatgtta 18231725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 21059006 - 21058962
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||||||||||||||| | ||| |||||||| ||||||    
T  21059006 aaaataaattaagtgtgattgaaatgttaaatgatcatgtatcat 21058962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 29814424 - 29814376
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||| |||||||| ||||| | |||||||||||| ||||||||||    
T  29814424 aaaataaactaagtgtggttgaaatgttatatgatcatctatcatgtta 29814376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 36267706 - 36267662
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||||| | |||||||  |||||||||||||||||||||||||||    
T  36267706 aaaatatagtaagtgtttttgaagtattatatgatcatttatcat 36267662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 44040848 - 44040892
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||| |||||| ||||| |||| |||||||||||||||||||||    
T  44040848 aaaatcaattaaatgtgaatgaaatattatatgatcatttatcat 44040892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 37711234 - 37711288
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactattt 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37711234 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttaatattt 37711288  T

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Target: chr4; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 27735836 - 27735884
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27735836 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 27735884  T

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Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 204
Target Start/End: Original strand, 55510261 - 55510366
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaataatatgtagtgttcgtgattaaaaaacta 196  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||  |||||||| ||||  ||||||| | | |||||||||| ||| ||||| ||    
T  55510261 aaaataaattaagtgtgactgaagtattatatgatcattcatcatgttgttatttcaa-tttttttaaaatattttatagtgttcgtaatttaaaaa-ta 55510358  T
Q  197 aaagtaaa 204  Q
    ||||||||    
T  55510359 aaagtaaa 55510366  T

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Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 17938259 - 17938206
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgttactattt 151  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  17938259 aaataaattaagtgtgattgaagtattatatgatcgtttatcatgttattattt 17938206  T

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Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 5730983 - 5730935
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5730983 aaaataaattaagtgtaattgaagtattatatgatcatttatcatgtta 5730935  T

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Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 26167028 - 26167076
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26167028 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtta 26167076  T

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Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 35248777 - 35248825
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35248777 aaaataaattaagtgtgattgaagtattatatgattatttatcatgtta 35248825  T

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Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 36151667 - 36151715
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36151667 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtta 36151715  T

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Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 46007854 - 46007806
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46007854 aaaataaattaagtgagattgaagtattatatgatcatttatcatgtta 46007806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 6891451 - 6891505
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactattt 151  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  6891451 aaaataaattaagtgtgattgaagtattatatgatcgtttataatgttattattt 6891505  T

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Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 45132654 - 45132610
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  45132654 aaaataaattaagtgtgattgaagtattatatgatcgtttatcat 45132610  T

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Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 45741981 - 45742029
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  45741981 aaaataaattaaatgtgattgaagtattatatgatcgtttatcatgtta 45742029  T

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Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 56135840 - 56135888
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  56135840 aaaataaattaagtgtttttgaagtattatatgatcatttatcatgtta 56135888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 41227576 - 41227619
Alignment:
Q  102 aaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  41227576 aaattaagtgtgattgaagtattatatgatcatttatcacgtta 41227619  T

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Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 43961501 - 43961548
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  43961501 aaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 43961548  T

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Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 47433861 - 47433808
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactattt 151  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  47433861 aaaataaattaagtgtgattgaagtattatatgatcgtttat-atgttattattt 47433808  T

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Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 1968512 - 1968464
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||||||    
T  1968512 aaaataaatcaggtgtgattgaagtattatatgatcgtttatcatgtta 1968464  T

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Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 2917116 - 2917068
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  2917116 aaaataaatttattgtgattgaagtattatatgatcgtttatcatgtta 2917068  T

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Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 16400891 - 16400939
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  16400891 aaaataaattaattatgattgaagtattatatgatcgtttatcatgtta 16400939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 17182638 - 17182594
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||||||||  |||||||||||||||||||||||||||    
T  17182638 aaaataaattaagtgtttttgaagtattatatgatcatttatcat 17182594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 21695040 - 21695004
Alignment:
Q  99 aataaattaagtgtgattgaagtattatatgatcatt 135  Q
    |||||||||||||||||||||||||||||||||||||    
T  21695040 aataaattaagtgtgattgaagtattatatgatcatt 21695004  T

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Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 54320525 - 54320573
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  54320525 aaaataaattaagtgtgattggagtattatatgattgtttatcatgtta 54320573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 11842399 - 11842442
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||| |||||||| ||||||||||||||||||||||||||||||    
T  11842399 aaatgaattaagtctgattgaagtattatatgatcatttatcat 11842442  T

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Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 14539363 - 14539410
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||    
T  14539363 aaaataaattaagtgtttttgaagtattatatgatcatttattatgtt 14539410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 18516624 - 18516577
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  18516624 aaaatgaattaagtgtgattgaagcattatgtgatcatttatcatgtt 18516577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 44784087 - 44784189
Alignment:
Q  101 taaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaataatatgtagtgttcgtgattaaaaaactaaaag 200  Q
    |||||||||||||||||||||||||||||||| ||||| | |||| ||| | ||  ||| | |||||| |  ||||||||||| ||| |||||| |||||    
T  44784087 taaattaagtgtgattgaagtattatatgatcgtttataaggttaatatgttaacgttt-agaaaatatttcgtagtgttcgtaatttaaaaacgaaaag 44784185  T
Q  201 taaa 204  Q
    ||||    
T  44784186 taaa 44784189  T

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Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 47846208 - 47846161
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  47846208 aaaataaattaagtgtttttgaagtattatatgattatttatcatgtt 47846161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 54745054 - 54745011
Alignment:
Q  101 taaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||||||||||| ||| |||||||||||||||||    
T  54745054 taaattaagtgtgattgaagtactatgtgatcatttatcatgtt 54745011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 54935159 - 54935204
Alignment:
Q  97 aaaataaattaagtgtgattgaagta-ttatatgatcatttatcat 141  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  54935159 aaaataaattaagtgtgattgaagtatttatatgatcgtttatcat 54935204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 31348474 - 31348426
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||| ||||||||||| |||||||||||  ||||||||||||    
T  31348474 aaaataaattatgtgtgattgaattattatatgattgtttatcatgtta 31348426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 34108379 - 34108331
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||| ||||||||||||||||  || |||||||||||||    
T  34108379 aaaataaattaagtatgattgaagtattatacaataatttatcatgtta 34108331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 41174436 - 41174484
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||| || ||||||||| ||||||||||||||||||| ||||||    
T  41174436 aaaataaatcaaatgtgattgatgtattatatgatcatttattatgtta 41174484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 4437578 - 4437531
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||| ||||||  ||||||||||||||||||| ||||||||||    
T  4437578 aaaataaatcaagtgtttttgaagtattatatgatcaattatcatgtt 4437531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 7977645 - 7977602
Alignment:
Q  101 taaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||| |||  ||||||||||||||||||||||||||||||    
T  7977645 taaattaattgtttttgaagtattatatgatcatttatcatgtt 7977602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 22186810 - 22186857
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||| ||||||  |||||||||||||| |||||||||||||||    
T  22186810 aaaataaataaagtgtttttgaagtattatataatcatttatcatgtt 22186857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 29798379 - 29798422
Alignment:
Q  101 taaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||| |||||||||||||||||||||||||| ||||| |||||    
T  29798379 taaatcaagtgtgattgaagtattatatgatcgtttattatgtt 29798422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 34995142 - 34995189
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  ||||||||||||| ||| ||||||||||||    
T  34995142 aaaataaattaagtgtttttgaagtattataagattatttatcatgtt 34995189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 47694440 - 47694487
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||| ||| ||||| | ||||||||||||||||||||||||||||||    
T  47694440 aaaatcaatcaagtgcggttgaagtattatatgatcatttatcatgtt 47694487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 54761139 - 54761096
Alignment:
Q  101 taaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||    
T  54761139 taaattaagtgtgattaaagtactatgtgatcatttatcatgtt 54761096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 55080670 - 55080717
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||| ||||||||  |||||||||| |||||||||||||||||||    
T  55080670 aaaataagttaagtgtttttgaagtattttatgatcatttatcatgtt 55080717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 5307098 - 5307140
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatc 139  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||    
T  5307098 aaaataaatcaagtgtgattgcagtattttatgatcatttatc 5307140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 141
Target Start/End: Original strand, 22921083 - 22921117
Alignment:
Q  107 aagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||||||||||||||||||||||||| ||||||||    
T  22921083 aagtgtgattgaagtattatatgatcgtttatcat 22921117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 141
Target Start/End: Complemental strand, 22970716 - 22970682
Alignment:
Q  107 aagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||||||||||||||||||||||||| ||||||||    
T  22970716 aagtgtgattgaagtattatatgatcgtttatcat 22970682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 132
Target Start/End: Complemental strand, 23332686 - 23332652
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatc 132  Q
    |||||||||||||||||| ||||||||||||||||    
T  23332686 aaataaattaagtgtgatagaagtattatatgatc 23332652  T

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Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 145
Target Start/End: Complemental strand, 54001238 - 54001208
Alignment:
Q  115 ttgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||    
T  54001238 ttgaagtattatatgatcatttatcatgtta 54001208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 131
Target Start/End: Original strand, 54494729 - 54494763
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgat 131  Q
    ||||||| |||||||||||||||||||||||||||    
T  54494729 aaaataagttaagtgtgattgaagtattatatgat 54494763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 56427052 - 56427006
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||| ||||||||||||||||  ||||||||||||||| ||||||||    
T  56427052 aaatcaattaagtgtgattgatctattatatgatcattaatcatgtt 56427006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 37761557 - 37761602
Alignment:
Q  99 aataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||  ||||||| |||||| |||||||||||||||    
T  37761557 aataaattaagtgtttttgaagtgttatataatcatttatcatgtt 37761602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 38702716 - 38702757
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttat 138  Q
    ||||||||||||||||||||||| |  |||||||||||||||    
T  38702716 aaaataaattaagtgtgattgaaatgctatatgatcatttat 38702757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 23813196 - 23813240
Alignment:
Q  101 taaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||| |||||| ||||||||| |||||||||||||||| |||||    
T  23813196 taaataaagtgttattgaagtactatatgatcatttatcgtgtta 23813240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 28332899 - 28332935
Alignment:
Q  101 taaattaagtgtgattgaagtattatatgatcattta 137  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  28332899 taaattaagtatgattgaagtattatatgatcgttta 28332935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 33224989 - 33224945
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatg 142  Q
    |||| ||||||||| ||||||| |||||||||| |||||||||||    
T  33224989 aaatcaattaagtgcgattgaattattatatgaccatttatcatg 33224945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 49735621 - 49735573
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||| ||||||||| ||| |||||||| ||| ||||||||||||    
T  49735621 aaaataaatcaagtgtgatagaaatattatattatcgtttatcatgtta 49735573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 24243199 - 24243138
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagtttt 159  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  24243199 aaattaattaagtgtgattgaagtattatatgatcatttatcatgttattatttcaattttt 24243138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 236
Target Start/End: Complemental strand, 1027002 - 1026863
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaataatatgtagtgttcgtgattaaaaaacta 196  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||| ||| | || |||| |||||||| |   |||||| ||  ||| |||||  |    
T  1027002 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttttgataaaatatttcatagtgtccgcaatttaaaaatga 1026903  T
Q  197 aaagtaaatcatctcctcctaaattctcaatccaaacaca 236  Q
    |||||||| | || |||||||||  ||| |||||||||||    
T  1026902 aaagtaaaccctcccctcctaaaccctccatccaaacaca 1026863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 29358490 - 29358354
Alignment:
Q  99 aataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaataatatgtagtgttcgtgattaaaaaactaaa 198  Q
    ||||||||||||||||||||||||||||| |||| ||||| |||||| ||| | || |||| | |||||| | | |||||| ||| ||| |||||  |||    
T  29358490 aataaattaagtgtgattgaagtattataggatcgtttataatgttaatatgttaa-tttttaaaaaatattttatagtgtccgtaatttaaaaataaaa 29358392  T
Q  199 agtaaatcatctcctcctaaattctcaatccaaacaca 236  Q
    |||||| | ||||||||||||  ||| |||||||||||    
T  29358391 agtaaaccttctcctcctaaaccctccatccaaacaca 29358354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 41103659 - 41103611
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41103659 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtta 41103611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 30581963 - 30581916
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  30581963 aaaacaaattaagtgtgattgaagtattatatgatcatttatcatgtt 30581916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 31738516 - 31738562
Alignment:
Q  99 aataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  31738516 aataaattaagtgtaattgaagtattatatgatcatttatcatgtta 31738562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 38198202 - 38198140
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagtttt 159  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||  |||||||| ||||    
T  38198202 aaaatgaattaagtgtgattgaagtattatatgatcatatatcatgttgttatttcaattttt 38198140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 11575559 - 11575511
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  11575559 aaaataaattaagtgtgattaaagtattatatgatcgtttatcatgtta 11575511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 12022296 - 12022249
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  12022296 aaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 12022249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 16024246 - 16024292
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||    
T  16024246 aaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 16024292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 37923231 - 37923177
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactattt 151  Q
    ||||||||||||||| |||| || ||||||||||||||||||||||||| |||||    
T  37923231 aaaataaattaagtgcgattaaaatattatatgatcatttatcatgttaatattt 37923177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 42650489 - 42650443
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgt 143  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||    
T  42650489 aaaataaattaagtgtgattgaagtattatatgattgtttatcatgt 42650443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 7503107 - 7503038
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaa 166  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||| ||| | || |||| ||||||    
T  7503107 aaaataaattaagtgtgattaaagtattatatgattgtttatcatgttaatatgttaactttttataaaa 7503038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 27487087 - 27487128
Alignment:
Q  103 aattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  27487087 aattaagtgttattgaagtattatatgatcatttatcatgtt 27487128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 6315153 - 6315201
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  6315153 aaaataaattaagtgtgattgaagtattatacgatcgtttatcaagtta 6315201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 31543225 - 31543177
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  31543225 aaaataaattaagtgtgattgaagtattatatgaccgtttatgatgtta 31543177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 36308934 - 36308982
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  36308934 aaaataaactaagtgtgattgaagtattatatgattgtttatcatgtta 36308982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 40990337 - 40990289
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||| |||||||||||||||||||||  |||||||||||    
T  40990337 aaaataaattaagtctgattgaagtattatatgatcgcttatcatgtta 40990289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 43732778 - 43732822
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||||||||  |||||||||||||||||||||||||||    
T  43732778 aaaataaattaagtgtttttgaagtattatatgatcatttatcat 43732822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 26167847 - 26167894
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||    
T  26167847 aaaataaataaagagttattgaagtattatatgatcatttatcatgtt 26167894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 28083833 - 28083880
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||    
T  28083833 aaaataaattaagtgtgattggagtattatatgattgtttatcatgtt 28083880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 30479870 - 30479827
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatca 140  Q
    ||||||||| |||||||||||||||||||||| |||||||||||    
T  30479870 aaaataaatcaagtgtgattgaagtattatattatcatttatca 30479827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 4247670 - 4247625
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatg 142  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||    
T  4247670 aaaataaattaagtatgatttaagtattatatgatcgtttatcatg 4247625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 16653040 - 16653081
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttat 138  Q
    ||||||||| |||||||||||||||||||||||||| |||||    
T  16653040 aaaataaatcaagtgtgattgaagtattatatgatcgtttat 16653081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 7979231 - 7979279
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||| |||||  |||||||||||||||||| |||||||||||||    
T  7979231 aaaataaatcaagtgcaattgaagtattatatgattatttatcatgtta 7979279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 11033508 - 11033556
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||| |||||||||||  ||||||||||| ||||||||||||    
T  11033508 aaaataaattatgtgtgattgaataattatatgatcgtttatcatgtta 11033556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 16838153 - 16838201
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||| ||||||||||||||||| |||||||||||||| || |||||||    
T  16838153 aaaatgaattaagtgtgattgaaatattatatgatcatataccatgtta 16838201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 21537021 - 21536981
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttat 138  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  21537021 aaatgaattgagtgtgattgaagtattatatgatcatttat 21536981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 27483652 - 27483696
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatg 142  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||    
T  27483652 aaataaataaagtgttattgaagtattatatgataatttatcatg 27483696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 29691067 - 29691027
Alignment:
Q  105 ttaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  29691067 ttaagtgtgattgaagtatcatatgatcgtttatcatgtta 29691027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 30664452 - 30664496
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||||||||||||||||||||||||||||||| | | ||||||||    
T  30664452 aaaataaattaagtgtgattgaagtattatataaccgtttatcat 30664496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 34552652 - 34552696
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||    
T  34552652 aaaattaattaagcgtaattgaagtattatatgatcatttatcat 34552696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 37032470 - 37032514
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||    
T  37032470 aaaataaattaagtgtgattaaagtattatatgatagtttatcat 37032514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 5656188 - 5656235
Alignment:
Q  112 tgattgaagtattatatgatcatttatcatgttactatttcaagtttt 159  Q
    |||||||||| ||||||||||||||||||||||  |||||||| ||||    
T  5656188 tgattgaagtgttatatgatcatttatcatgttcttatttcaaatttt 5656235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 9933332 - 9933379
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||| |  ||||| ||||||||||||||||||||||||    
T  9933332 aaaataaattaagtatttttgaaatattatatgatcatttatcatgtt 9933379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 35694908 - 35694873
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatc 132  Q
    ||||||||| ||||||||||||||||||||||||||    
T  35694908 aaaataaatcaagtgtgattgaagtattatatgatc 35694873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 43826423 - 43826470
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||| ||||||||  |||||||||| |||||||||||||||||||    
T  43826423 aaaataagttaagtgtttttgaagtattttatgatcatttatcatgtt 43826470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 144
Target Start/End: Complemental strand, 22591544 - 22591514
Alignment:
Q  114 attgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||||||||||||||||||||    
T  22591544 attgaagtattatatgatcatttatcatgtt 22591514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 36042503 - 36042545
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatc 139  Q
    ||||||||||||  |||||||||||||||||||| ||||||||    
T  36042503 aaaataaattaaaagtgattgaagtattatatgaccatttatc 36042545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 6453275 - 6453332
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaa 154  Q
    |||||| |||||||||  ||||||||||||||||| | ||||||||||| || |||||    
T  6453275 aaaatatattaagtgtttttgaagtattatatgattacttatcatgttattaattcaa 6453332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 9434450 - 9434405
Alignment:
Q  99 aataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||   |||||||||||||| |||||||||||||||    
T  9434450 aataaattaagtggttttgaagtattatattatcatttatcatgtt 9434405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 9718625 - 9718584
Alignment:
Q  104 attaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||| ||||||||||||||||||||||  ||||||||||||    
T  9718625 attaattgtgattgaagtattatatgattgtttatcatgtta 9718584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 10028201 - 10028250
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttac 146  Q
    ||||||||||||||||| ||||||| |||||||||| |||| ||| ||||    
T  10028201 aaaataaattaagtgtggttgaagtcttatatgatcgtttaccatattac 10028250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 30365223 - 30365268
Alignment:
Q  99 aataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||  ||||||| |||||| |||||||||||||||    
T  30365223 aataaattaagtgtttttgaagtgttatataatcatttatcatgtt 30365268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 3727008 - 3726960
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||  |||||||| |||||||||| | ||||||||||||    
T  3727008 aaaataaattaagcatgattgaaatattatatgaccgtttatcatgtta 3726960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 4775726 - 4775678
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||  ||||||||||||| | || ||||||||||||||||||||    
T  4775726 aaaataaaccaagtgtgattgaaatgttttatgatcatttatcatgtta 4775678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 4874490 - 4874438
Alignment:
Q  102 aaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaa 154  Q
    |||||||||||||||||| ||||| ||||| || |||||| ||| ||||||||    
T  4874490 aaattaagtgtgattgaaatattacatgattatatatcatattattatttcaa 4874438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 20472845 - 20472801
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||| ||||||  |||||||||||||||||||| ||||||    
T  20472845 aaaataaatcaagtgtttttgaagtattatatgatcatatatcat 20472801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 39449398 - 39449442
Alignment:
Q  100 ataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||    
T  39449398 ataaattaactgtttttgaagtattatatgatcattaatcatgtt 39449442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 32926737 - 32926784
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32926737 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 32926784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 4097665 - 4097617
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4097665 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtta 4097617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 13583810 - 13583858
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  13583810 aaaataaattaagtgtgattgaaatattatatgatcatttattatgtta 13583858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 14515562 - 14515609
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||    
T  14515562 aaaataaattaagtgtgaatgaagtattatattatcatttatcatgtt 14515609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 5526897 - 5526835
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagtttt 159  Q
    ||||||||||||  ||| ||||| ||||||||||||||||||||||||| |||||||| ||||    
T  5526897 aaaataaattaaaagtgcttgaattattatatgatcatttatcatgttattatttcaaatttt 5526835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 238
Target Start/End: Complemental strand, 21606997 - 21606856
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaataatatgtagtgttcgtgattaaaaaacta 196  Q
    ||||||||| |||||||| |||||||||||| |||| |||||||||||| ||| | || |||| |||||| | |   |||| | ||| ||| |||||  |    
T  21606997 aaaataaataaagtgtgactgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtttccgtaatttaaaaatga 21606898  T
Q  197 aaagtaaatcatctcctcctaaattctcaatccaaacacacc 238  Q
    |||||||| | || |||||||||  ||| |||||||||||||    
T  21606897 aaagtaaaccctcccctcctaaaccctccatccaaacacacc 21606856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 665994 - 665946
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  665994 aaaaaaaattaagtgtggttgaagtattatatcatcatttatcatgtta 665946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 1300714 - 1300782
Alignment:
Q  100 ataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaata 168  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||| ||| | || |||| ||||||||    
T  1300714 ataaattaagtgtgattgaagtattatatgattgtttatcaggttaatatgttaactttttataaaata 1300782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 10818315 - 10818355
Alignment:
Q  105 ttaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  10818315 ttaaatgtgattgaagtattatatgatcatttatcatgtta 10818355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 17155447 - 17155495
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||| |||||||||||||| |||||||||||||||| |||||||||||    
T  17155447 aaaatcaattaagtgtgatttaagtattatatgatcagttatcatgtta 17155495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 2892985 - 2892942
Alignment:
Q  108 agtgtgattgaagtattatatgatcatttatcatgttactattt 151  Q
    ||||||||||||||||||||||||| |||||||||||| |||||    
T  2892985 agtgtgattgaagtattatatgatcgtttatcatgttattattt 2892942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 204
Target Start/End: Complemental strand, 4097388 - 4097281
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaataatatgtagtgttcgtgattaaaaaacta 196  Q
    ||||||||||||||||  | |||||||| |||||||||||||||||||  || ||||| |||  | |||||| | | || ||| ||||||| ||||| ||    
T  4097388 aaaataaattaagtgttttggaagtattgtatgatcatttatcatgttgttaattcaattttctaaaaaatattttataatgtccgtgattcaaaaaata 4097289  T
Q  197 aaagtaaa 204  Q
    ||||||||    
T  4097288 aaagtaaa 4097281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 26318396 - 26318443
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  26318396 aaaataaattaagtgtttttgaagtattatatgatcaattatcatgtt 26318443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 32922437 - 32922484
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  32922437 aaatatattaagtgtgatcgaagtattatatgattatttatcatgtta 32922484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 2892756 - 2892702
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactattt 151  Q
    |||||||||| |||||||||||| |||||||||||  |||||||||||| |||||    
T  2892756 aaaataaatttagtgtgattgaaatattatatgattgtttatcatgttattattt 2892702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 1395727 - 1395772
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatg 142  Q
    ||||||||||||||||||||||| || || ||||||||||||||||    
T  1395727 aaaataaattaagtgtgattgaaataatacatgatcatttatcatg 1395772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 16509371 - 16509408
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcat 134  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  16509371 aaaataaatcaagtgtgattgaagtattatatgatcat 16509408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 1390411 - 1390458
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  1390411 aaaataaattaagtttgattgaaatattat-tgatcatttatcatgtta 1390458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 3841176 - 3841220
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||    
T  3841176 aaaataaattaagtgtttttgaagtattatatcatcatttatcat 3841220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 14548759 - 14548711
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||| ||||||||||  ||||||||||||||||| ||||||    
T  14548759 aaaataaattaactgtgattgaaccattatatgatcatttataatgtta 14548711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 19278191 - 19278143
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||| ||| |||||||||||| |||||||| ||||||||||||    
T  19278191 aaaataaatttagtctgattgaagtatcatatgatcgtttatcatgtta 19278143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 30487458 - 30487410
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||| |||||||||||||||||||||| ||  ||||||||||||    
T  30487458 aaaataaatcaagtgtgattgaagtattatattattgtttatcatgtta 30487410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 3023607 - 3023650
Alignment:
Q  101 taaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||    
T  3023607 taaattaagtgtgaatgaaatattatatgattatttatcatgtt 3023650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 14368047 - 14368094
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||| ||||||||||| | |||||||||||||||||||||| |||||    
T  14368047 aaaatcaattaagtgtggtcgaagtattatatgatcatttattatgtt 14368094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 25468552 - 25468509
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatca 140  Q
    ||||||||||||||||  |||||||||||||| |||||||||||    
T  25468552 aaaataaattaagtgtttttgaagtattatataatcatttatca 25468509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 16738149 - 16738095
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactattt 151  Q
    |||||||| ||||||| ||| ||||||||||||||| | |||||||||| |||||    
T  16738149 aaaataaagtaagtgttatttaagtattatatgatcgtatatcatgttattattt 16738095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 23924994 - 23924952
Alignment:
Q  112 tgattgaagtattatatgatcatttatcatgttactatttcaa 154  Q
    ||||||||||||||||| |||||||||||||| | ||||||||    
T  23924994 tgattgaagtattatataatcatttatcatgtaattatttcaa 23924952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 30850065 - 30850011
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactattt 151  Q
    |||| ||||| ||| | ||||||||||||||||||| |||||||||||| |||||    
T  30850065 aaaacaaatttagtataattgaagtattatatgatcgtttatcatgttattattt 30850011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 6695067 - 6695096
Alignment:
Q  115 ttgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||||||||||||||||    
T  6695067 ttgaagtattatatgatcatttatcatgtt 6695096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 29692969 - 29693014
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatg 142  Q
    |||| |||||||||||  ||||||||||| ||||||||||||||||    
T  29692969 aaaacaaattaagtgtttttgaagtattacatgatcatttatcatg 29693014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 31799030 - 31799059
Alignment:
Q  115 ttgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||||||||||||||||    
T  31799030 ttgaagtattatatgatcatttatcatgtt 31799059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 5585455 - 5585407
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||||| |||| ||| ||| ||||| ||||||    
T  5585455 aaaataaattaagtgtgattgaaatattgtataatcgtttattatgtta 5585407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 12811133 - 12811086
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||||||||  |||||||  ||||||||||||    
T  12811133 aaaataaattaagtgtgattgaagta-gatatgattgtttatcatgtta 12811086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 25741498 - 25741542
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||||| |||| |||||| |||||||||| ||||||||    
T  25741498 aaaataaattaagcgtgactgaagttttatatgatcgtttatcat 25741542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 28477076 - 28477116
Alignment:
Q  102 aaattaagtgtgattgaagtattatatgatcatttatcatg 142  Q
    |||||||||||  ||||||||||| ||||||||||||||||    
T  28477076 aaattaagtgtttttgaagtattacatgatcatttatcatg 28477116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 31849201 - 31849249
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||| |||||||||||||||||||||| ||  ||||||| ||||    
T  31849201 aaaataaatcaagtgtgattgaagtattatattattgtttatcacgtta 31849249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 33236042 - 33236090
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||  ||||||||| ||||||||||  ||||||||||||    
T  33236042 aaaataaattaagactgattgaagaattatatgattgtttatcatgtta 33236090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 34176426 - 34176474
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||| ||||||||||| ||||||||| |||| ||||| ||||||    
T  34176426 aaaataaatcaagtgtgattgcagtattatacgatcgtttattatgtta 34176474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 81564 - 81502
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagtttt 159  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| ||||    
T  81564 aaaataaatcaagtatgattgaagtattatatgatcatttatcatgttattatttcaattttt 81502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 9e-18; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 41110474 - 41110356
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaataatatgtagtgttcgtgattaaaaaacta 196  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||| ||| | || |||| |||||||| |   |||||| ||| ||| |||||  |    
T  41110474 aaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaatatttcatagtgtccgtaatttaaaaatga 41110375  T
Q  197 aaagtaaatcatctcctcc 215  Q
    |||||||| | ||||||||    
T  41110374 aaagtaaaccttctcctcc 41110356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 18654753 - 18654705
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18654753 aaaataaattaagtgtaattgaagtattatatgatcatttatcatgtta 18654705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 193
Target Start/End: Complemental strand, 45663297 - 45663202
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaataatatgtagtgttcgtgattaaaaaa 193  Q
    |||||||||||  |||||||||||||||||| ||||||||||||||||  |||||||| |||||| |||||| | | ||||||||||  ||||||||    
T  45663297 aaaataaattatatgtgattgaagtattataagatcatttatcatgttgttatttcaa-ttttcaaaaaatattttatagtgttcgtatttaaaaaa 45663202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 14898067 - 14898115
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  14898067 aaaataaattaagtgtgattgaagtattatatgatcgtttatcgtgtta 14898115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 24560308 - 24560356
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  24560308 aaaataaattaaatgtgattgaagtattatatgatcgtttatcatgtta 24560356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 27542084 - 27542036
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  27542084 aaaataaattaactgtgattgaagtattatatgatcgtttatcatgtta 27542036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 37237013 - 37237061
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||    
T  37237013 aaaataaattaagtgtgattgaagtactaaatgatcatttatcatgtta 37237061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 46204977 - 46205017
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcattta 137  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  46204977 aaaataaattaagtgtgattgaagtattatatgatcattta 46205017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 16884124 - 16884077
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  16884124 aaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 16884077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 34641083 - 34641130
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  34641083 aaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 34641130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 37807176 - 37807219
Alignment:
Q  102 aaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  37807176 aaattaagtgtgattgaagtattatatgatcgtttatcatgtta 37807219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 42772123 - 42772170
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  42772123 aaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 42772170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 54996833 - 54996786
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  54996833 aaaatgaatgaagtgtgattgaagtattatatgatcatttatcatgtt 54996786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 2387913 - 2387859
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactattt 151  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||| |||||    
T  2387913 aaaataaattaagtgtgattaaattattatatgatcgtttatcatgttattattt 2387859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 238
Target Start/End: Original strand, 21773873 - 21774014
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaataatatgtagtgttcgtgattaaaaaacta 196  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||| | ||| | || |||| | |||| | |   |||||||||| ||| |||||  |    
T  21773873 aaaataaattaagtgtgattgaagaattatatgattgtttatcatgtaaatatgttaactttttaaaaaacatttcctagtgttcgtaatttaaaaataa 21773972  T
Q  197 aaagtaaatcatctcctcctaaattctcaatccaaacacacc 238  Q
    |||||||| | || |||||||||  ||  |||||||||||||    
T  21773973 aaagtaaaccctcccctcctaaacccttcatccaaacacacc 21774014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 42699765 - 42699721
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||||||||  |||||||||||||||||||||||||||    
T  42699765 aaaataaattaagtgtttttgaagtattatatgatcatttatcat 42699721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 51819278 - 51819230
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||| |||||||||||||||||||| |||| ||||||||||||    
T  51819278 aaaataaatttagtgtgattgaagtattatacgatcgtttatcatgtta 51819230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 25655125 - 25655079
Alignment:
Q  97 aaaataaattaagtgtgattgaagtatt--atatgatcatttatcat 141  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  25655125 aaaataaattaagtgtgattgaagtattatatatgatcatttatcat 25655079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 40858656 - 40858703
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||||    
T  40858656 aaaataaatttagtgtttttgaagtattatatgatcatttatcatgtt 40858703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 41040103 - 41040032
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaata 168  Q
    |||||||| |||| |||||||||||||||||||||  |||||||||||| ||| | || |||| ||||||||    
T  41040103 aaaataaagtaagcgtgattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaata 41040032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 44412452 - 44412499
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  44412452 aaaataaattaagtgtttttgaagtattatatgatgatttatcatgtt 44412499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 49815512 - 49815559
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  49815512 aaaataaattaagcgtgattgaagtattatatgatcattgatcttgtt 49815559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 47989118 - 47989061
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaa 154  Q
    |||||||||||| ||||||||||| ||||||  || ||||||||||||| ||||||||    
T  47989118 aaaataaattaaatgtgattgaagcattataaaattatttatcatgttattatttcaa 47989061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 47998405 - 47998348
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaa 154  Q
    |||||||||||| ||||||||||| ||||||  || ||||||||||||| ||||||||    
T  47998405 aaaataaattaaatgtgattgaagcattataaaattatttatcatgttattatttcaa 47998348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 48007692 - 48007635
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaa 154  Q
    |||||||||||| ||||||||||| ||||||  || ||||||||||||| ||||||||    
T  48007692 aaaataaattaaatgtgattgaagcattataaaattatttatcatgttattatttcaa 48007635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 651822 - 651886
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttca 161  Q
    |||||||||||||||||||| || ||||||| |||| ||| |||||||| ||||| || ||||||    
T  651822 aaaataaattaagtgtgattaaaatattatacgatcctttgtcatgttattattttaatttttca 651886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 9312624 - 9312576
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||  |||||||||||||  ||||||||||||    
T  9312624 aaaataaattaagtgtgatttgagtattatatgattgtttatcatgtta 9312576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 16275858 - 16275810
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||| ||||||||||||||||||||||| |  ||||||||||||    
T  16275858 aaaataaatcaagtgtgattgaagtattatatggttgtttatcatgtta 16275810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 36569056 - 36569008
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||||| ||||||| |||  ||||||||||||    
T  36569056 aaaataaattaagtgtgattgaactattatacgattgtttatcatgtta 36569008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 21090224 - 21090177
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  ||||||||||||||||| || |||||||||    
T  21090224 aaaataaattaagtgtttttgaagtattatatgataatatatcatgtt 21090177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 24253813 - 24253860
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  ||||||| |||||| |||||||||||||||    
T  24253813 aaaataaattaagtgtttttgaagtgttatataatcatttatcatgtt 24253860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 41414169 - 41414216
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||| ||| ||  ||||||||||||||||||||||||||||||    
T  41414169 aaaataaatcaagcgtttttgaagtattatatgatcatttatcatgtt 41414216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 46978518 - 46978565
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||| |||  |||||||||||||| |||||||||||||||    
T  46978518 aaaataaattaaatgtttttgaagtattatataatcatttatcatgtt 46978565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 48683703 - 48683746
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatca 140  Q
    ||||||||||||||||  ||||| ||||||||||||||||||||    
T  48683703 aaaataaattaagtgtttttgaaatattatatgatcatttatca 48683746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 52185107 - 52185178
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaata 168  Q
    |||||||||||| | | ||||||||||||||||||  |||||||||||| ||| | || |||| ||||||||    
T  52185107 aaaataaattaaatataattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaata 52185178  T

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Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 25179986 - 25180032
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||| ||||||||||||||| ||||||||||||| ||| ||||||    
T  25179986 aaataatttaagtgtgattgaaatattatatgatcacttaccatgtt 25180032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 10748450 - 10748406
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||||||||||||||||||  ||||||||||||| | ||||||||    
T  10748450 aaaataaattaagtgtgataaaagtattatatgaccttttatcat 10748406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 12790465 - 12790517
Alignment:
Q  99 aataaattaagtgtgattgaagtattatatgatcatttatcatgttactattt 151  Q
    |||||||||||||| || |||||| ||||||||| || ||||||||| |||||    
T  12790465 aataaattaagtgtaatcgaagtaatatatgatctttcatcatgttattattt 12790517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 17474359 - 17474315
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||||||||  |||||||||||| |||| |||||||||    
T  17474359 aaaataaattaagtgtttttgaagtattatttgattatttatcat 17474315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 26135888 - 26135932
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||||||||  |||||||||||||| || |||||||||    
T  26135888 aaaataaattaagtgtttttgaagtattatataattatttatcat 26135932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 40464024 - 40463976
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||| ||||||| | |||||||||  ||||||||||||    
T  40464024 aaaataaattaagtgagattgaatttttatatgattgtttatcatgtta 40463976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 44302942 - 44302986
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||||| || ||||||||||||||||||||||| |||||| ||||    
T  44302942 aaaatatatgaagtgtgattgaagtattatatggtcatttgtcat 44302986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 46703387 - 46703355
Alignment:
Q  105 ttaagtgtgattgaagtattatatgatcattta 137  Q
    |||||||||| ||||||||||||||||||||||    
T  46703387 ttaagtgtgactgaagtattatatgatcattta 46703355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 54574514 - 54574470
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||||| |||||||||||||||||| | | ||||||||    
T  54574514 aaaataaattaagcgtgattgaagtattatataaccgtttatcat 54574470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 9e-18; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 15224845 - 15224799
Alignment:
Q  99 aataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15224845 aataaattaagtgtgattgaagtattatatgatcatttatcatgtta 15224799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 8427024 - 8426976
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8427024 aaaataaattaagtgcgattgaagtattatatgatcatttatcatgtta 8426976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 37740044 - 37739996
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37740044 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtta 37739996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 31795922 - 31795875
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  31795922 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtt 31795875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 36567002 - 36566935
Alignment:
Q  99 aataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaa 166  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||| | || |||| ||||||    
T  36567002 aataaattaattgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttataaaa 36566935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 219
Target Start/End: Complemental strand, 39732882 - 39732760
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaataatatgtagtgttcgtgattaaaaaacta 196  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||| ||| | || |||| |||||| | |   || ||||||| ||| |||||  |    
T  39732882 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatga 39732783  T
Q  197 aaagtaaatcatctcctcctaaa 219  Q
    |||||||| | || |||||||||    
T  39732782 aaagtaaaccctcccctcctaaa 39732760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 41778864 - 41778906
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatc 139  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  41778864 aaaataaattaagtgtgattgaagtattatatgatcatttatc 41778906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 20545800 - 20545857
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaa 154  Q
    |||||||||||| |||||||||||||||||||||| |||| |||||||| ||||||||    
T  20545800 aaaataaattaaatgtgattgaagtattatatgattatttctcatgttattatttcaa 20545857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 887007 - 887051
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  887007 aaaataaattatgtgtgattgaagtattatatgatcatttatcat 887051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 16565868 - 16565912
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  16565868 aaaataaattaagtgtgattgaagtattatatgatcgtttatcat 16565912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 31928196 - 31928140
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaa 154  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||| || |||||    
T  31928196 aaataaattaagtgtttttgaagtattatatgatcatttatcatgttattaattcaa 31928140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 45098260 - 45098324
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttca 161  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||  || ||||| ||||||    
T  45098260 aaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaatttttca 45098324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 35325360 - 35325422
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagtttt 159  Q
    |||||||||||||| |  ||||||||||||||||||||||||||||||| || ||||| ||||    
T  35325360 aaaataaattaagtatttttgaagtattatatgatcatttatcatgttattaattcaattttt 35325422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 2241501 - 2241549
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  2241501 aaaataaattaagtgtaattgaagtattatatgattgtttatcatgtta 2241549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 6721775 - 6721727
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  6721775 aaaataaatcaagtgtgattgaaatattatattatcatttatcatgtta 6721727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 12541857 - 12541905
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||||||    
T  12541857 aaaataaattaagtgcgattgaagtactatatgatcgtttatcatgtta 12541905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 17379903 - 17379951
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  17379903 aaaataaattaagtgtgattggagtattatatgattgtttatcatgtta 17379951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 18811419 - 18811467
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||||    
T  18811419 aaaataaattaagtgtgattgaaatattatatgattgtttatcatgtta 18811467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 23748186 - 23748234
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  23748186 aaaataaatcaagtgtgattgaagtattatattatcgtttatcatgtta 23748234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 33265697 - 33265741
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||||||||  |||||||||||||||||||||||||||    
T  33265697 aaaataaattaagtgtttttgaagtattatatgatcatttatcat 33265741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 36347694 - 36347646
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  36347694 aaaataaattaagtgtgattgaagtattatataattgtttatcatgtta 36347646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 39821760 - 39821808
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  39821760 aaaataaattaagtgcgatttaagtattataagatcatttatcatgtta 39821808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 42316909 - 42316869
Alignment:
Q  105 ttaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  42316909 ttaagtgtgattgaagtattatatgatcgtttatcatgtta 42316869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 45257398 - 45257442
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||||||||  |||||||||||||||||||||||||||    
T  45257398 aaaataaattaagtgtttttgaagtattatatgatcatttatcat 45257442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 132
Target Start/End: Original strand, 7681339 - 7681374
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatc 132  Q
    ||||||||||||||||||||||||||||||||||||    
T  7681339 aaaataaattaagtgtgattgaagtattatatgatc 7681374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 15085853 - 15085810
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatca 140  Q
    ||||||||||||||||  ||||||||||||||||||||||||||    
T  15085853 aaaataaattaagtgtttttgaagtattatatgatcatttatca 15085810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 31061450 - 31061497
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  31061450 aaaataaattaagtgtttttgaaatattatatgatcatttatcatgtt 31061497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 131
Target Start/End: Original strand, 40022461 - 40022495
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgat 131  Q
    |||||||||||||||||||||||||||||||||||    
T  40022461 aaaataaattaagtgtgattgaagtattatatgat 40022495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 12751906 - 12751947
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttat 138  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  12751906 aaaataatttaagtgtgattgaagtattatatgatcgtttat 12751947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 887210 - 887254
Alignment:
Q  100 ataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||| | |||||||||||||||||||||||| |||||||||||    
T  887210 ataaatcatgtgtgattgaagtattatatgatcgtttatcatgtt 887254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 19566974 - 19566930
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||||||||||||||||||||||| || | ||||||||    
T  19566974 aaaataaattaagtgtgattgaagtattatacgaccgtttatcat 19566930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 9631652 - 9631699
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||| |||||||| ||||||||||||| ||| ||||||||||||    
T  9631652 aaataaatcaagtgtgaatgaagtattatattatcgtttatcatgtta 9631699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 21502124 - 21502171
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  |||||||||||||||| |||||||| ||||    
T  21502124 aaaataaattaagtgtttttgaagtattatatgaccatttatcttgtt 21502171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 21662362 - 21662323
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcattt 136  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  21662362 aaaatcaattaagtttgattgaagtattatatgatcattt 21662323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 34209560 - 34209603
Alignment:
Q  102 aaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||| |||||||||  ||||||||||||    
T  34209560 aaattaagtgtgattgaagtgttatatgattgtttatcatgtta 34209603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 28262596 - 28262548
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||  |||||||||| ||||| |||||| ||||||||||||    
T  28262596 aaaataaattacatgtgattgaaatattacatgatcgtttatcatgtta 28262548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 31086596 - 31086640
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||| || ||||||||||||||||| ||||||| ||||||||||    
T  31086596 aaaatcaactaagtgtgattgaagtagtatatgaacatttatcat 31086640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 32503250 - 32503294
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||||||||||||| ||||| || ||||||||||| |||||||||    
T  32503250 aaaataaattaagtatgattaaaatattatatgattatttatcat 32503294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 4373719 - 4373671
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4373719 aaaataaattaagtgtgattgaaatattatatgatcatttatcatgtta 4373671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 16938570 - 16938618
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16938570 aaaataaattaagtgtgattgaaatattatatgatcatttatcatgtta 16938618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 28279629 - 28279581
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28279629 aaaataaactaagtgtgattgaagtattatatgatcatttatcatgtta 28279581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 36392303 - 36392234
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaa 166  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||| ||| | || |||| ||||||    
T  36392303 aaaatagattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaa 36392234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 37551498 - 37551567
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaa 166  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||| ||| | || |||| ||||||    
T  37551498 aaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaa 37551567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 37654328 - 37654397
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaa 166  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||| ||| | || |||| ||||||    
T  37654328 aaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaa 37654397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 10072800 - 10072752
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  10072800 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 10072752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 11756968 - 11757016
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  11756968 aaaataaattaagtgtgattaaagtattatatgatcatttatgatgtta 11757016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 42681544 - 42681615
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaata 168  Q
    ||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| || |||| | ||||||    
T  42681544 aaaataattttagtgtgattaaagtattatatgatcatttatcatgttattattttaattttttaaaaaata 42681615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 26414984 - 26415053
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaa 166  Q
    |||||| |||||||||||||||||||||||||| || |||||||||||| ||| | || |||| ||||||    
T  26414984 aaaatatattaagtgtgattgaagtattatatggtcgtttatcatgttaatatgttaactttttataaaa 26415053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 37606985 - 37607054
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaa 166  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||| ||| | || |||| ||||||    
T  37606985 aaaataaattatatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaa 37607054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 37779194 - 37779263
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaa 166  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||| ||| | || |||| ||||||    
T  37779194 aaaataaattatatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaa 37779263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 9856971 - 9857019
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  9856971 aaaataaatcaagtgtgattgaagtattatatgatcgtttattatgtta 9857019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 10476119 - 10476163
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||    
T  10476119 aaaataaattaagtgtgattgaagtattatataatcgtttatcat 10476163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 13634802 - 13634850
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||| ||||||||||| |||||||||||| ||||||||||||    
T  13634802 aaaataaattatgtgtgattgaattattatatgatcgtttatcatgtta 13634850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 9798764 - 9798717
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  9798764 aaataaattaattgtgattgaagtattatatgatcgtttttcatgtta 9798717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 18855698 - 18855745
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  18855698 aaaatgaattaagtttgatttaagtattatatgatcatttatcatgtt 18855745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 34980901 - 34980948
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||||    
T  34980901 aaaataaattaagtgtttttgaagtattatataatcatttatcatgtt 34980948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 10204667 - 10204708
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttat 138  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  10204667 aaaataaattaagtgtttttgaagtattatatgatcatttat 10204708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 33424955 - 33424898
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaa 154  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||  || ||||||||    
T  33424955 aaaataaattaaatctgattaaagtattatatgatcatttatcattctattatttcaa 33424898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 35244004 - 35244061
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaa 154  Q
    |||||||||||| |||||||||  |||||||| |||||||||||||||  ||||||||    
T  35244004 aaaataaattaaatgtgattgagatattatataatcatttatcatgtttttatttcaa 35244061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 2550503 - 2550459
Alignment:
Q  99 aataaattaagtgtgattgaagtattatatgatcatttatcatgt 143  Q
    ||||||||| |||||||||||||||||||||||  ||||||||||    
T  2550503 aataaattacgtgtgattgaagtattatatgattgtttatcatgt 2550459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 7544227 - 7544275
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||| |||||||||||||||||||||||||  ||||| ||||||    
T  7544227 aaaataaatcaagtgtgattgaagtattatatgattgtttattatgtta 7544275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 16501943 - 16501895
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||| |||||||||| |||| |||||||||||||||| ||||||    
T  16501943 aaaataaatcaagtgtgattaaagttttatatgatcatttattatgtta 16501895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 17024377 - 17024329
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||  |||||||||||||||||||| ||| ||||||||    
T  17024377 aaaataaattaagtacgattgaagtattatatgatcgtttttcatgtta 17024329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 27110120 - 27110160
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttat 138  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  27110120 aaataaattaagtgtgattaaaatattatatgatcatttat 27110160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 29002359 - 29002311
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||| | |||||| |||||||||||||| ||||||||||||    
T  29002359 aaaataaattaaatatgattgtagtattatatgatcgtttatcatgtta 29002311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 1977623 - 1977670
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||| ||||| || ||||||||||||||||||||| |||||||||||    
T  1977623 aaaatcaattaggtttgattgaagtattatatgatcctttatcatgtt 1977670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 8551571 - 8551524
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  || ||||||||||||||||||||| |||||    
T  8551571 aaaataaattaagtgtttttaaagtattatatgatcatttataatgtt 8551524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 10043162 - 10043115
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||| ||||||||||  || |||||||||||||||||||||||||||    
T  10043162 aaaattaattaagtgtttttaaagtattatatgatcatttatcatgtt 10043115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 128
Target Start/End: Complemental strand, 20513602 - 20513571
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatat 128  Q
    ||||||||||||||||||||||||||||||||    
T  20513602 aaaataaattaagtgtgattgaagtattatat 20513571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 21581038 - 21581085
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  ||||||||| |||||| |||||||||||||    
T  21581038 aaaataaattaagtgtttttgaagtatcatatgaacatttatcatgtt 21581085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 33744346 - 33744299
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  |||||| | |||||||||||||||||||||    
T  33744346 aaaataaattaagtgtttttgaagaaatatatgatcatttatcatgtt 33744299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 12036087 - 12036041
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||||  || |||||||||||||| ||||||||||||    
T  12036087 aaataaattaagtgttttttaagtattatatgataatttatcatgtt 12036041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 14684634 - 14684588
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||||||||||| ||||||||  | ||||||||||||    
T  14684634 aaataaattaagtgtgattgaaatattatatacttatttatcatgtt 14684588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 145
Target Start/End: Complemental strand, 20147013 - 20146971
Alignment:
Q  103 aattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||| ||||||||||||  |||||||||||    
T  20147013 aattaagtgtgattgaaatattatatgatcgcttatcatgtta 20146971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 2556170 - 2556113
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaa 154  Q
    ||||||| || ||||||| |  ||| ||||||||||||||||||||||| ||||||||    
T  2556170 aaaataagttgagtgtgactagagttttatatgatcatttatcatgttattatttcaa 2556113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 126
Target Start/End: Complemental strand, 8502988 - 8502959
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattat 126  Q
    ||||||||||||||||||||||||||||||    
T  8502988 aaaataaattaagtgtgattgaagtattat 8502959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 138
Target Start/End: Complemental strand, 7079797 - 7079769
Alignment:
Q  110 tgtgattgaagtattatatgatcatttat 138  Q
    |||||||||||||||||||||||||||||    
T  7079797 tgtgattgaagtattatatgatcatttat 7079769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 40305818 - 40305774
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||||| ||  |||||||| ||||||||||||||||||    
T  40305818 aaaataaattaagggtttttgaagtactatatgatcatttatcat 40305774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 40095086 - 40095038
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40095086 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtta 40095038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 50744434 - 50744386
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50744434 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtta 50744386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 44211058 - 44211011
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  44211058 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtt 44211011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 32951471 - 32951402
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaa 166  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||| ||| | || |||| ||||||    
T  32951471 aaaataaattaagtgtgattgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaa 32951402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 193
Target Start/End: Complemental strand, 36285727 - 36285631
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaataatatgtagtgttcgtgattaaaaaa 193  Q
    |||||| || |||||||||||||||||||||||||| |||||||||||| ||| | || |||| | |||||| | | |||||||||| ||| |||||    
T  36285727 aaaatatatcaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaatattttatagtgttcgtaatttaaaaa 36285631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 41676370 - 41676418
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  41676370 aaaataaattaagtgtgattgtagtattatatgatcgtttatcatgtta 41676418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 49946741 - 49946693
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||    
T  49946741 aaaataaattaaatgtgattgaagtattatatgataatttatcatgtta 49946693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 8529891 - 8529938
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||    
T  8529891 aaataaattaagtgtgattgaagtattatatgatcgtttaccatgtta 8529938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 215
Target Start/End: Original strand, 41498498 - 41498613
Alignment:
Q  100 ataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaataatatgtagtgttcgtgattaaaaaactaaaa 199  Q
    |||| |||||||||||||||||||||||||||| |||||||||||| ||| | || |||| |||||| | |   |||||| ||| ||| |||||  ||||    
T  41498498 ataagttaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaa 41498597  T
Q  200 gtaaatcatctcctcc 215  Q
    ||||||| || |||||    
T  41498598 gtaaatcctcccctcc 41498613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 51303537 - 51303490
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  51303537 aaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 51303490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 51582072 - 51582119
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||    
T  51582072 aaaataaattcagtgtgattgaagtattacatgatcatttatcatgtt 51582119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 42230629 - 42230683
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactattt 151  Q
    |||||||||||||||||||||||||||||||||||  ||||| |||||| |||||    
T  42230629 aaaataaattaagtgtgattgaagtattatatgattgtttattatgttaatattt 42230683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 1085643 - 1085598
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatg 142  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  1085643 aaaataaattaagtgtttttgaagtattatatgatcatttatcatg 1085598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 30010423 - 30010471
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  30010423 aaaataaattaagtgtggttgaagtattatatgatcgtttataatgtta 30010471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 45585838 - 45585790
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||||||||    
T  45585838 aaaataaattaagtgtgatcgaagtactatatgatcgtttatcatgtta 45585790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 49832638 - 49832697
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagtttt 159  Q
    |||||||| |||||||||||||||||||||   |||||||||||||||| |||||||| ||||    
T  49832638 aaaataaaataagtgtgattgaagtattat---atcatttatcatgttattatttcaattttt 49832697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 51597759 - 51597803
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  51597759 aaaataaattaagtgtgattgaagtattatatgattgtttatcat 51597803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 12108133 - 12108086
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  12108133 aaaataaattaactgtgattgaagtatcataagatcatttatcatgtt 12108086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 25268355 - 25268398
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatca 140  Q
    ||||||||||||||||  ||||||||||||||||||||||||||    
T  25268355 aaaataaattaagtgtttttgaagtattatatgatcatttatca 25268398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 27739142 - 27739189
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    
T  27739142 aaaatcaattaagtgtgattgaagtatttaatgatcatttatcatgtt 27739189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 35927904 - 35927951
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||| |  ||||||||||||||||||||||||||||||    
T  35927904 aaaataaattaagtatttttgaagtattatatgatcatttatcatgtt 35927951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 42742463 - 42742416
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||    
T  42742463 aaaataaattaagtgtgattgaagtactatatgactatttatcatgtt 42742416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 2859085 - 2859051
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgat 131  Q
    |||||||||||||||||||||||||||||||||||    
T  2859085 aaaataaattaagtgtgattgaagtattatatgat 2859051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 49065548 - 49065590
Alignment:
Q  99 aataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||||||||||||||||||||||||  |||||||||    
T  49065548 aataaattaagtgtgattgaagtattatatgaaaatttatcat 49065590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 2506630 - 2506671
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttat 138  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  2506630 aaaataaattaagtgtttttgaagtattatatgatcatttat 2506671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 33643359 - 33643416
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaa 154  Q
    ||||||||||||||||  ||||||||||||||||||||| ||||| ||| || |||||    
T  33643359 aaaataaattaagtgtttttgaagtattatatgatcattcatcatattattaattcaa 33643416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 525252 - 525208
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||||||||||||| || |||||||||||||| ||||||||||||    
T  525252 aaaataaattaagtttgtttgaagtattatataatcatttatcat 525208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 10391963 - 10392011
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||| ||||||| ||||||||||||| | ||||||||||||    
T  10391963 aaaataaattaattgtgattaaagtattatatgaccgtttatcatgtta 10392011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 17622630 - 17622690
Alignment:
Q  99 aataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagtttt 159  Q
    ||||||||||||||  | ||||||||||||||||| ||||||||||| || ||||| ||||    
T  17622630 aataaattaagtgttttagaagtattatatgatcacttatcatgttattaattcaattttt 17622690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 38510047 - 38509999
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||| |||||||||||||||||||||| ||| |||||| |||||    
T  38510047 aaaataaatcaagtgtgattgaagtattatattatcgtttatcgtgtta 38509999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 40709445 - 40709401
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||| |||||||||||  |||||||||||||||||||||||||||    
T  40709445 aaaagaaattaagtgtttttgaagtattatatgatcatttatcat 40709401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 50079537 - 50079493
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    ||||||||||||||||  || ||||||||||||||||||||||||    
T  50079537 aaaataaattaagtgtttttaaagtattatatgatcatttatcat 50079493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 20607311 - 20607358
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||  ||||||||||||||||| || ||||||||||    
T  20607311 aaataaattaagtgtttttgaagtattatatgataatatatcatgtta 20607358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 51303728 - 51303685
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcat 141  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||    
T  51303728 aaatcaattaagtgtgattgaactattatatgatcattaatcat 51303685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 145
Target Start/End: Original strand, 7444596 - 7444634
Alignment:
Q  107 aagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  7444596 aagtgtgattgaagtattatatgatcgtttattatgtta 7444634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 20576269 - 20576236
Alignment:
Q  112 tgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||| ||||||||||||    
T  20576269 tgattgaagtattatatgatcgtttatcatgtta 20576236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 26940996 - 26940963
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatga 130  Q
    ||||||||| ||||||||||||||||||||||||    
T  26940996 aaaataaatcaagtgtgattgaagtattatatga 26940963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 35349615 - 35349546
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaa 166  Q
    |||||||| |||| || ||||||||||||||||||  |||||||||||| ||| | || |||| ||||||    
T  35349615 aaaataaactaagggttattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaa 35349546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 6563668 - 6563715
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||| |||| |||||| |||||||||||| ||||||||||||    
T  6563668 aaaataaattatgtgtcattgaattattatatgatc-tttatcatgtta 6563715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 12234101 - 12234149
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||| |||||||||||| |||| |||||||||| ||| ||||||    
T  12234101 aaaataaatcaagtgtgattgatgtataatatgatcatatattatgtta 12234149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 40287407 - 40287367
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttat 138  Q
    |||||||||||||||  |||||||||||||| |||||||||    
T  40287407 aaataaattaagtgtttttgaagtattatataatcatttat 40287367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 144
Target Start/End: Complemental strand, 52711825 - 52711797
Alignment:
Q  116 tgaagtattatatgatcatttatcatgtt 144  Q
    |||||||||||||||||||||||||||||    
T  52711825 tgaagtattatatgatcatttatcatgtt 52711797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0783 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0783
Description:

Target: scaffold0783; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 6063 - 6001
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagtttt 159  Q
    ||||||||| |||| ||||| |||||||||||||||||||||||||||| |||||||| ||||    
T  6063 aaaataaatcaagtatgattcaagtattatatgatcatttatcatgttattatttcaattttt 6001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 238
Target Start/End: Original strand, 6675 - 6815
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaataatatgtagtgttcgtgattaaaaaacta 196  Q
    |||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||| || ||||   |||||| |   |||||| ||| ||| |||||| |    
T  6675 aaaataaatttagtgtgattgaagtattatatgatcgtttat-atgttaatattttaatttttttaaaaatatttcatagtgtgcgtaatttaaaaacga 6773  T
Q  197 aaagtaaatcatctcctcctaaattctcaatccaaacacacc 238  Q
    |||||||  | || |||||||||| ||| ||||||| |||||    
T  6774 aaagtaagccctcccctcctaaatcctccatccaaagacacc 6815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 16449 - 16401
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||    
T  16449 aaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 16401  T

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Target: scaffold0067 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 39343 - 39292
Alignment:
Q  97 aaaataaattaagtgtgattgaag---tattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  39343 aaaataaattaagtgtgattgaagaagtattatatgatcatttatcatgtta 39292  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 69360 - 69303
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttactatttcaa 154  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||| ||  ||||||||    
T  69360 aaaataaattaagggtgacagaagtattatatgatcatttatcatcttgttatttcaa 69303  T

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Target: scaffold0294 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 15354 - 15402
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||||| |||||||||||||||||  ||||||| ||||    
T  15354 aaaataaattaagtgtggttgaagtattatatgattgtttatcacgtta 15402  T

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Target: scaffold0071 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 52977 - 53023
Alignment:
Q  98 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||| |||||||||  ||||| ||||||||||||||||||||||||    
T  52977 aaatacattaagtgtttttgaaatattatatgatcatttatcatgtt 53023  T

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Target: scaffold0240 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 17640 - 17700
Alignment:
Q  106 taagtgtgattgaagtattatatgatcatttatcatgttactatttcaagttttcataaaat 167  Q
    |||||||  ||||||||||||||||| |||||||||||| ||| ||||| |||||| |||||    
T  17640 taagtgtatttgaagtattatatgattatttatcatgttgctaattcaa-ttttcaaaaaat 17700  T

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Target: scaffold0341 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 18861 - 18908
Alignment:
Q  97 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||| |||| |||||| |||||||||||| ||||||||||||    
T  18861 aaaataaattatgtgtcattgaattattatatgatc-tttatcatgtta 18908  T

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Target: scaffold0095 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 8241 - 8285
Alignment:
Q  100 ataaattaagtgtgattgaagtattatatgatcatttatcatgtt 144  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||    
T  8241 ataaattaactgtttttgaagtattatatgatcattaatcatgtt 8285  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 100693 - 100653
Alignment:
Q  105 ttaagtgtgattgaagtattatatgatcatttatcatgtta 145  Q
    ||||||||||||||| | ||||||||| |||||||||||||    
T  100693 ttaagtgtgattgaattgttatatgattatttatcatgtta 100653  T

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