View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17473_low_43 (Length: 237)
Name: NF17473_low_43
Description: NF17473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17473_low_43 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 30515644 - 30515424
Alignment:
| Q |
1 |
gaatcgtagccatcacgtacttttgaatttacactagctgcaacatccacctttgtcatgccattaactggattttgggcagtagaatttgaggatgatg |
100 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30515644 |
gaatcgtagctatcacgtacttttgaatttacactagctgcaacatccacctttgtcatgccattaactggattttgggcagtagaatttgaggatgatg |
30515545 |
T |
|
| Q |
101 |
atgctggagatgaataagctggcttaccccacttcttctgaacaccatcaagccttagcttaagccctgatgatcctgtatctgatgataatcccactga |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30515544 |
atgctggagatgaataagctggcttaccccacttcttctgaacaccatcaagccttagcttaagccctgatgatcctgtatctgatgataatcccactga |
30515445 |
T |
|
| Q |
201 |
cgtgatctggtgagtctccct |
221 |
Q |
| |
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||||||||||||||||||||| |
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|
| T |
30515444 |
cgtgatctggtgagtctccct |
30515424 |
T |
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