View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17473_low_47 (Length: 234)
Name: NF17473_low_47
Description: NF17473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17473_low_47 |
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Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 38115743 - 38115957
Alignment:
| Q |
1 |
tgtttcttggacttcaataattgttggcactgctcagcatgggctggctgaggaggcattgactttatatgatgatatggttttggccggtgttaaacca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38115743 |
tgtttcttggacttcaataattgttggcactgctcagcatgggctggctgaggaggcattgactttatatgatgatatggttttggccggtgttaaacca |
38115842 |
T |
|
| Q |
101 |
aatgaggtgacttttgttgggttgatctatgcctgcagtcatgttggtctagttagcaagggtcgtgctttgttcaagtccatggttgaagattttggaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38115843 |
aatgaggtgacttttgttgggttgatctatgcctgcagtcatgttggtctagttagcaagggtcgtgctttgttcaagtccatggttgaagattttggaa |
38115942 |
T |
|
| Q |
201 |
ttaggccgtctttgc |
215 |
Q |
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||||||||||||||| |
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| T |
38115943 |
ttaggccgtctttgc |
38115957 |
T |
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