View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17473_low_50 (Length: 228)
Name: NF17473_low_50
Description: NF17473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17473_low_50 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 10750403 - 10750630
Alignment:
| Q |
1 |
tgctgattagtacttttggattactctttcagattgtgaaaagggcttcaaaatttgattttgatgttgttgatatttgtaagtgatttatgctattgtt |
100 |
Q |
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| T |
10750403 |
tgctgattagtacttttggattactctttcagattgtgaaaagggcttcaaaatttgattttgatgttgttgatttttgtaagtgatttatgctattgtg |
10750502 |
T |
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| Q |
101 |
tgagttcttaaattaaaacaaacttgaagcttttgcatggagtgatggaggtgttgttgaagttatttggtggaactctgaatataactacaaaatgcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10750503 |
tgagttcttaaattaaaacaaacttgaagcttttgcatggagtgatggaggtgttgttgaagttatttggtggaactctgaatataactacaaaatgcat |
10750602 |
T |
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| Q |
201 |
ggttttgcttgttactgttttgatcctt |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
10750603 |
ggttttgcttgttactgttttgatcctt |
10750630 |
T |
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