View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17473_low_55 (Length: 214)
Name: NF17473_low_55
Description: NF17473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17473_low_55 |
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Alignment Details
Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 97 - 195
Target Start/End: Original strand, 32651569 - 32651667
Alignment:
| Q |
97 |
ggcaaatgatatcaaaataaacacttcataattaaaatatttcctctatacacagatatagatactatggtcctcatgagcttaactcagttgatagaa |
195 |
Q |
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| T |
32651569 |
ggcaaatgatatcaaaataaacacttcataattaaaatatttcctctatacacagatatagataccatggttctcgtgaacttaactcagttgatagaa |
32651667 |
T |
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Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 32651473 - 32651508
Alignment:
| Q |
1 |
ccaggtcccaagctaataccactaggccaactaagt |
36 |
Q |
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| T |
32651473 |
ccaggtcccaagccaataccactaggccaactaagt |
32651508 |
T |
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