View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17474_high_18 (Length: 364)

Name: NF17474_high_18
Description: NF17474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17474_high_18
NF17474_high_18
[»] chr2 (44 HSPs)
chr2 (44-356)||(3045629-3045930)
chr2 (181-294)||(40626414-40626527)
chr2 (179-298)||(6457541-6457660)
chr2 (182-270)||(38490532-38490620)
chr2 (302-353)||(12414323-12414374)
chr2 (302-353)||(12426383-12426434)
chr2 (307-349)||(11052261-11052303)
chr2 (307-349)||(11563791-11563833)
chr2 (301-349)||(34248100-34248148)
chr2 (305-349)||(38972456-38972500)
chr2 (307-350)||(32879276-32879319)
chr2 (309-352)||(39160316-39160359)
chr2 (309-352)||(39208835-39208878)
chr2 (307-349)||(11796847-11796889)
chr2 (307-349)||(17829726-17829768)
chr2 (307-349)||(31363888-31363930)
chr2 (307-349)||(34247377-34247419)
chr2 (307-349)||(43657630-43657672)
chr2 (304-349)||(6229922-6229967)
chr2 (304-349)||(7939318-7939363)
chr2 (304-349)||(20894318-20894363)
chr2 (304-349)||(34173038-34173082)
chr2 (304-349)||(35899129-35899174)
chr2 (306-349)||(8314290-8314333)
chr2 (307-350)||(15006425-15006468)
chr2 (307-346)||(33146029-33146068)
chr2 (303-349)||(552545-552590)
chr2 (307-349)||(1366337-1366379)
chr2 (307-349)||(4437306-4437348)
chr2 (307-349)||(13873310-13873352)
chr2 (307-349)||(14013435-14013477)
chr2 (307-349)||(17829045-17829087)
chr2 (307-349)||(20893198-20893240)
chr2 (307-349)||(34173751-34173793)
chr2 (307-349)||(37199637-37199679)
chr2 (307-353)||(41521736-41521781)
chr2 (307-349)||(42791447-42791489)
chr2 (311-356)||(32875155-32875200)
chr2 (304-349)||(33206177-33206222)
chr2 (307-352)||(35657433-35657478)
chr2 (307-359)||(3044922-3044974)
chr2 (305-349)||(16111204-16111248)
chr2 (305-349)||(31709775-31709819)
chr2 (304-348)||(44332071-44332115)
[»] chr3 (62 HSPs)
chr3 (171-300)||(38457668-38457801)
chr3 (180-277)||(48936375-48936470)
chr3 (192-276)||(40416904-40416988)
chr3 (295-349)||(18364615-18364669)
chr3 (307-349)||(33115271-33115313)
chr3 (304-349)||(22524838-22524883)
chr3 (307-352)||(40036430-40036475)
chr3 (307-352)||(49080643-49080688)
chr3 (306-349)||(13625942-13625985)
chr3 (302-349)||(14602147-14602194)
chr3 (306-349)||(23309657-23309700)
chr3 (307-349)||(5984946-5984988)
chr3 (307-349)||(7725443-7725485)
chr3 (307-357)||(10688785-10688835)
chr3 (307-349)||(10887707-10887749)
chr3 (307-349)||(18365318-18365360)
chr3 (307-349)||(22130434-22130476)
chr3 (307-349)||(25481235-25481277)
chr3 (307-349)||(27256011-27256053)
chr3 (307-349)||(44500080-44500122)
chr3 (304-349)||(4558026-4558071)
chr3 (304-349)||(27255279-27255324)
chr3 (304-349)||(40974030-40974075)
chr3 (304-349)||(41865721-41865766)
chr3 (181-270)||(45818683-45818772)
chr3 (305-349)||(291820-291864)
chr3 (305-349)||(3089745-3089789)
chr3 (307-347)||(4558778-4558818)
chr3 (307-351)||(20030613-20030657)
chr3 (301-349)||(32737208-32737256)
chr3 (307-351)||(40928199-40928243)
chr3 (307-346)||(3090458-3090497)
chr3 (306-349)||(11056597-11056640)
chr3 (302-349)||(13623167-13623214)
chr3 (310-349)||(27396693-27396732)
chr3 (307-349)||(1263096-1263138)
chr3 (307-349)||(10888441-10888483)
chr3 (307-349)||(11345396-11345438)
chr3 (307-349)||(11414517-11414559)
chr3 (307-349)||(20612146-20612188)
chr3 (307-349)||(23308933-23308975)
chr3 (307-349)||(27394249-27394291)
chr3 (201-271)||(32490868-32490938)
chr3 (307-349)||(37183075-37183117)
chr3 (307-349)||(40035729-40035771)
chr3 (307-349)||(40927490-40927532)
chr3 (307-349)||(41864974-41865016)
chr3 (307-349)||(45241198-45241240)
chr3 (307-349)||(47794689-47794731)
chr3 (307-349)||(53490046-53490088)
chr3 (312-349)||(1262399-1262436)
chr3 (307-352)||(19556579-19556624)
chr3 (308-349)||(32255762-32255803)
chr3 (304-349)||(37183797-37183842)
chr3 (301-349)||(4756986-4757034)
chr3 (307-351)||(11581833-11581877)
chr3 (307-347)||(14601417-14601457)
chr3 (301-349)||(22516983-22517031)
chr3 (305-349)||(24542305-24542349)
chr3 (180-300)||(39795290-39795410)
chr3 (309-349)||(44951023-44951063)
chr3 (305-349)||(54606461-54606505)
[»] chr1 (45 HSPs)
chr1 (180-294)||(26793701-26793815)
chr1 (181-299)||(4950136-4950254)
chr1 (180-294)||(9383284-9383398)
chr1 (181-300)||(4076397-4076516)
chr1 (181-300)||(19806807-19806928)
chr1 (302-349)||(50144089-50144136)
chr1 (307-349)||(41322233-41322275)
chr1 (308-352)||(8061730-8061774)
chr1 (305-349)||(41321505-41321549)
chr1 (301-349)||(52505282-52505330)
chr1 (307-349)||(16536366-16536408)
chr1 (307-349)||(25813016-25813058)
chr1 (307-349)||(36604721-36604763)
chr1 (307-349)||(36605438-36605480)
chr1 (307-349)||(41575168-41575210)
chr1 (307-349)||(45737994-45738036)
chr1 (307-349)||(46683730-46683772)
chr1 (307-349)||(47233054-47233096)
chr1 (304-349)||(25069039-25069084)
chr1 (307-352)||(33126179-33126224)
chr1 (307-352)||(41576046-41576091)
chr1 (181-269)||(12855317-12855405)
chr1 (308-356)||(13574193-13574241)
chr1 (306-349)||(1845853-1845896)
chr1 (207-270)||(5785742-5785805)
chr1 (307-349)||(1846577-1846619)
chr1 (307-349)||(4601741-4601783)
chr1 (307-349)||(11917156-11917198)
chr1 (307-349)||(15357637-15357679)
chr1 (307-349)||(25068319-25068361)
chr1 (309-347)||(28044475-28044513)
chr1 (307-349)||(36509741-36509783)
chr1 (307-349)||(42830532-42830574)
chr1 (307-349)||(43319910-43319952)
chr1 (307-349)||(45737299-45737341)
chr1 (307-349)||(52506012-52506053)
chr1 (310-347)||(7306956-7306993)
chr1 (307-344)||(7842276-7842313)
chr1 (304-349)||(16537058-16537102)
chr1 (181-270)||(42472074-42472163)
chr1 (304-349)||(42831239-42831284)
chr1 (306-350)||(125104-125148)
chr1 (307-347)||(25991427-25991467)
chr1 (307-351)||(28971497-28971541)
chr1 (308-356)||(37418822-37418870)
[»] chr6 (49 HSPs)
chr6 (172-300)||(8547486-8547614)
chr6 (172-300)||(8573839-8573967)
chr6 (181-241)||(14227984-14228044)
chr6 (307-357)||(14313186-14313236)
chr6 (295-349)||(32521818-32521872)
chr6 (304-349)||(2523375-2523420)
chr6 (304-345)||(32003907-32003948)
chr6 (304-357)||(34250738-34250791)
chr6 (305-349)||(34709955-34709999)
chr6 (306-349)||(12766940-12766983)
chr6 (307-349)||(187764-187806)
chr6 (307-349)||(7127695-7127737)
chr6 (307-349)||(9241577-9241619)
chr6 (307-349)||(11522794-11522836)
chr6 (307-349)||(11523515-11523557)
chr6 (307-349)||(12025511-12025553)
chr6 (307-349)||(12693840-12693882)
chr6 (307-353)||(14306786-14306832)
chr6 (295-349)||(14313887-14313941)
chr6 (307-349)||(14873012-14873054)
chr6 (307-349)||(25527724-25527766)
chr6 (307-349)||(32114445-32114487)
chr6 (304-349)||(14873735-14873780)
chr6 (304-349)||(25577239-25577284)
chr6 (301-349)||(2661146-2661194)
chr6 (305-349)||(7448928-7448972)
chr6 (182-238)||(18596741-18596797)
chr6 (307-351)||(30462152-30462196)
chr6 (302-349)||(14224528-14224575)
chr6 (195-230)||(30121980-30122015)
chr6 (302-349)||(34709247-34709294)
chr6 (246-300)||(129150-129204)
chr6 (307-349)||(3767784-3767826)
chr6 (307-349)||(5443728-5443770)
chr6 (311-349)||(7448227-7448265)
chr6 (307-349)||(10702265-10702307)
chr6 (307-349)||(10702972-10703014)
chr6 (307-349)||(12026235-12026277)
chr6 (307-349)||(12033155-12033197)
chr6 (207-265)||(16342753-16342811)
chr6 (307-349)||(21802642-21802684)
chr6 (307-349)||(25528455-25528497)
chr6 (311-349)||(31882547-31882585)
chr6 (307-345)||(33950220-33950258)
chr6 (197-238)||(129318-129359)
chr6 (304-349)||(12767644-12767689)
chr6 (304-349)||(34280007-34280052)
chr6 (305-349)||(188471-188515)
chr6 (304-348)||(22021963-22022007)
[»] chr5 (47 HSPs)
chr5 (181-300)||(32529427-32529548)
chr5 (182-231)||(15416346-15416395)
chr5 (304-349)||(31477002-31477047)
chr5 (306-349)||(14594780-14594823)
chr5 (307-349)||(17781082-17781124)
chr5 (307-349)||(19408534-19408576)
chr5 (307-353)||(20541015-20541061)
chr5 (295-349)||(35751499-35751553)
chr5 (301-349)||(3934016-3934064)
chr5 (301-349)||(24625532-24625580)
chr5 (308-352)||(32020460-32020504)
chr5 (306-349)||(8572693-8572736)
chr5 (306-349)||(31850697-31850740)
chr5 (207-270)||(34731240-34731303)
chr5 (306-349)||(37657375-37657418)
chr5 (307-349)||(9119585-9119627)
chr5 (307-349)||(13685963-13686005)
chr5 (307-349)||(14594064-14594106)
chr5 (307-349)||(20691109-20691151)
chr5 (307-349)||(37333898-37333940)
chr5 (304-349)||(4054723-4054768)
chr5 (307-352)||(18524398-18524443)
chr5 (308-349)||(20691835-20691876)
chr5 (306-349)||(15175199-15175242)
chr5 (306-349)||(18523722-18523765)
chr5 (314-345)||(20570869-20570900)
chr5 (304-347)||(36742113-36742156)
chr5 (306-349)||(36762108-36762151)
chr5 (307-349)||(4055446-4055488)
chr5 (307-349)||(6029449-6029491)
chr5 (307-349)||(15145116-15145158)
chr5 (307-349)||(21639013-21639055)
chr5 (307-349)||(24624813-24624854)
chr5 (307-349)||(27979226-27979268)
chr5 (307-349)||(27979937-27979979)
chr5 (307-349)||(32458582-32458624)
chr5 (307-349)||(36737486-36737528)
chr5 (307-349)||(37334625-37334667)
chr5 (312-349)||(1199782-1199819)
chr5 (304-349)||(6031386-6031431)
chr5 (201-270)||(16290799-16290868)
chr5 (304-349)||(20184051-20184096)
chr5 (307-352)||(21639722-21639767)
chr5 (304-349)||(31601581-31601626)
chr5 (305-349)||(17780339-17780383)
chr5 (307-351)||(17967814-17967858)
chr5 (307-347)||(42598317-42598357)
[»] chr7 (64 HSPs)
chr7 (181-294)||(41482477-41482590)
chr7 (181-294)||(39644849-39644962)
chr7 (297-357)||(22263748-22263808)
chr7 (304-349)||(32388185-32388230)
chr7 (305-349)||(2790073-2790117)
chr7 (192-299)||(23318990-23319097)
chr7 (180-297)||(24429633-24429751)
chr7 (308-357)||(36848527-36848576)
chr7 (304-349)||(40343750-40343795)
chr7 (185-294)||(45884698-45884807)
chr7 (301-349)||(11639885-11639933)
chr7 (306-349)||(317272-317315)
chr7 (306-349)||(317995-318038)
chr7 (306-349)||(38669989-38670032)
chr7 (307-349)||(2146912-2146954)
chr7 (309-351)||(3340770-3340812)
chr7 (307-349)||(6185370-6185412)
chr7 (307-349)||(6191886-6191928)
chr7 (307-349)||(8122622-8122664)
chr7 (301-351)||(8123317-8123367)
chr7 (307-349)||(19156113-19156155)
chr7 (307-349)||(20755512-20755554)
chr7 (307-349)||(25606919-25606961)
chr7 (307-349)||(30738185-30738227)
chr7 (307-357)||(31220793-31220843)
chr7 (307-349)||(38670721-38670763)
chr7 (307-357)||(40189094-40189144)
chr7 (307-349)||(40401589-40401631)
chr7 (304-349)||(2146028-2146073)
chr7 (192-300)||(2334037-2334148)
chr7 (307-348)||(36847827-36847868)
chr7 (308-357)||(36890112-36890161)
chr7 (304-349)||(48982576-48982621)
chr7 (301-349)||(20261650-20261698)
chr7 (305-349)||(38790065-38790109)
chr7 (245-300)||(5784320-5784375)
chr7 (302-349)||(8535471-8535518)
chr7 (307-358)||(23742687-23742738)
chr7 (306-349)||(38790778-38790821)
chr7 (306-349)||(48872712-48872755)
chr7 (307-349)||(5228676-5228718)
chr7 (307-349)||(6184647-6184689)
chr7 (307-349)||(14753914-14753956)
chr7 (307-349)||(20260999-20261041)
chr7 (306-351)||(24679923-24679969)
chr7 (307-349)||(27144176-27144218)
chr7 (307-357)||(27144870-27144920)
chr7 (307-349)||(31221493-31221535)
chr7 (307-349)||(32867940-32867981)
chr7 (307-349)||(42813616-42813658)
chr7 (307-349)||(48981868-48981910)
chr7 (307-344)||(552841-552878)
chr7 (312-349)||(20261619-20261656)
chr7 (304-345)||(22264478-22264519)
chr7 (195-240)||(29200676-29200721)
chr7 (307-352)||(32867239-32867284)
chr7 (307-348)||(38095985-38096026)
chr7 (207-300)||(39594606-39594699)
chr7 (304-349)||(40400894-40400939)
chr7 (244-289)||(41147920-41147965)
chr7 (308-349)||(42813018-42813059)
chr7 (308-349)||(46011157-46011198)
chr7 (301-349)||(3341478-3341526)
chr7 (305-349)||(36687290-36687333)
[»] chr8 (38 HSPs)
chr8 (180-287)||(38503906-38504010)
chr8 (181-300)||(556724-556843)
chr8 (302-353)||(34925444-34925495)
chr8 (303-349)||(29726430-29726476)
chr8 (307-352)||(6292511-6292556)
chr8 (304-349)||(10216173-10216218)
chr8 (307-352)||(11141096-11141141)
chr8 (301-349)||(11759379-11759427)
chr8 (305-349)||(29459296-29459340)
chr8 (297-349)||(37836907-37836958)
chr8 (302-349)||(13439381-13439428)
chr8 (307-349)||(3075303-3075345)
chr8 (307-349)||(8628089-8628131)
chr8 (307-349)||(22934286-22934328)
chr8 (307-349)||(25597770-25597812)
chr8 (307-349)||(32905365-32905407)
chr8 (298-348)||(37872905-37872955)
chr8 (307-349)||(39998367-39998409)
chr8 (308-349)||(3076004-3076045)
chr8 (307-348)||(34364617-34364658)
chr8 (305-349)||(14879515-14879559)
chr8 (185-277)||(39283656-39283748)
chr8 (310-349)||(6099514-6099553)
chr8 (307-354)||(17496258-17496305)
chr8 (310-353)||(34678595-34678638)
chr8 (307-349)||(3075129-3075171)
chr8 (307-349)||(5872775-5872817)
chr8 (311-349)||(6293235-6293273)
chr8 (307-353)||(11760101-11760147)
chr8 (307-349)||(14880226-14880268)
chr8 (307-349)||(25954141-25954183)
chr8 (307-349)||(32904257-32904299)
chr8 (308-349)||(253524-253565)
chr8 (308-349)||(662293-662334)
chr8 (308-349)||(848091-848132)
chr8 (304-353)||(44147665-44147714)
chr8 (301-349)||(25598495-25598543)
chr8 (307-347)||(40791043-40791083)
[»] chr4 (82 HSPs)
chr4 (181-277)||(45413844-45413940)
chr4 (304-352)||(48372407-48372455)
chr4 (307-349)||(615429-615471)
chr4 (307-349)||(6232416-6232458)
chr4 (295-349)||(8193028-8193082)
chr4 (180-238)||(29539098-29539156)
chr4 (181-300)||(34666350-34666473)
chr4 (307-349)||(37423138-37423180)
chr4 (180-282)||(42964515-42964617)
chr4 (304-349)||(7165388-7165433)
chr4 (307-352)||(7797648-7797693)
chr4 (301-349)||(616169-616217)
chr4 (305-349)||(17730218-17730262)
chr4 (307-351)||(26705029-26705073)
chr4 (302-349)||(721312-721359)
chr4 (306-349)||(23721374-23721417)
chr4 (303-345)||(4950637-4950679)
chr4 (307-349)||(7166116-7166158)
chr4 (307-349)||(7478667-7478709)
chr4 (307-349)||(10156016-10156058)
chr4 (307-349)||(13392789-13392831)
chr4 (307-349)||(13395928-13395970)
chr4 (307-349)||(13771713-13771755)
chr4 (307-349)||(16960200-16960242)
chr4 (307-349)||(32448978-32449020)
chr4 (307-349)||(33032853-33032895)
chr4 (303-349)||(36422102-36422148)
chr4 (303-349)||(37423772-37423817)
chr4 (307-349)||(47029812-47029854)
chr4 (307-349)||(47030520-47030562)
chr4 (307-349)||(56310104-56310146)
chr4 (302-347)||(755566-755611)
chr4 (304-349)||(6233824-6233869)
chr4 (304-349)||(13482175-13482220)
chr4 (304-349)||(18362735-18362780)
chr4 (308-349)||(19313341-19313382)
chr4 (304-349)||(20545056-20545101)
chr4 (308-349)||(35667604-35667645)
chr4 (304-349)||(36600146-36600191)
chr4 (244-289)||(43481366-43481411)
chr4 (307-348)||(44665224-44665265)
chr4 (304-349)||(46095398-46095443)
chr4 (305-349)||(6711225-6711269)
chr4 (301-349)||(26809084-26809132)
chr4 (305-349)||(28464164-28464208)
chr4 (305-349)||(35667321-35667365)
chr4 (305-349)||(36897453-36897497)
chr4 (302-349)||(6232309-6232356)
chr4 (304-347)||(35665944-35665987)
chr4 (306-349)||(36898137-36898180)
chr4 (221-300)||(44125989-44126068)
chr4 (302-349)||(50824618-50824665)
chr4 (306-349)||(53306384-53306427)
chr4 (307-349)||(722017-722059)
chr4 (307-349)||(796378-796420)
chr4 (244-294)||(2183303-2183353)
chr4 (307-349)||(6233141-6233183)
chr4 (299-349)||(7797692-7797742)
chr4 (307-349)||(10155498-10155540)
chr4 (307-349)||(12250669-12250711)
chr4 (307-349)||(16192353-16192395)
chr4 (307-349)||(19314051-19314093)
chr4 (307-349)||(23265822-23265864)
chr4 (307-349)||(23269163-23269205)
chr4 (303-349)||(23308789-23308835)
chr4 (307-349)||(23722089-23722131)
chr4 (181-239)||(24155113-24155171)
chr4 (307-349)||(33032155-33032197)
chr4 (307-349)||(35854268-35854310)
chr4 (311-357)||(41919938-41919984)
chr4 (307-349)||(46096157-46096199)
chr4 (307-349)||(46138658-46138700)
chr4 (307-349)||(54145011-54145053)
chr4 (307-349)||(55068838-55068880)
chr4 (302-347)||(16960914-16960959)
chr4 (308-349)||(17729507-17729548)
chr4 (181-294)||(19181470-19181583)
chr4 (307-352)||(29979052-29979096)
chr4 (308-349)||(35667419-35667460)
chr4 (312-353)||(37735513-37735554)
chr4 (213-289)||(25970853-25970929)
chr4 (182-270)||(55945733-55945820)
[»] scaffold0105 (2 HSPs)
scaffold0105 (295-349)||(19684-19738)
scaffold0105 (307-349)||(19061-19103)
[»] scaffold0533 (2 HSPs)
scaffold0533 (306-347)||(9480-9521)
scaffold0533 (307-349)||(10148-10190)
[»] scaffold0102 (2 HSPs)
scaffold0102 (301-349)||(27040-27088)
scaffold0102 (303-349)||(26344-26390)
[»] scaffold0051 (1 HSPs)
scaffold0051 (301-349)||(11667-11715)
[»] scaffold0289 (1 HSPs)
scaffold0289 (307-349)||(3403-3445)
[»] scaffold0201 (1 HSPs)
scaffold0201 (307-349)||(15366-15408)
[»] scaffold0115 (1 HSPs)
scaffold0115 (304-349)||(32703-32748)
[»] scaffold0340 (2 HSPs)
scaffold0340 (302-357)||(12180-12235)
scaffold0340 (307-349)||(12897-12939)
[»] scaffold2113 (1 HSPs)
scaffold2113 (307-349)||(721-763)
[»] scaffold0460 (1 HSPs)
scaffold0460 (307-349)||(13451-13493)
[»] scaffold0368 (2 HSPs)
scaffold0368 (307-349)||(10588-10630)
scaffold0368 (304-349)||(11295-11340)
[»] scaffold0068 (1 HSPs)
scaffold0068 (307-349)||(59255-59297)
[»] scaffold0098 (1 HSPs)
scaffold0098 (307-348)||(34353-34394)
[»] scaffold0067 (1 HSPs)
scaffold0067 (308-349)||(18780-18821)


Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 44 - 356
Target Start/End: Complemental strand, 3045930 - 3045629
Alignment:
Q  44 atgatagtttaaggatattaaatttagaatgctttcattttatttgatgcatacactaaacaattataaagatgtgtaaggagaatttaatcgctaatgg 143  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3045930 atgatagtttaaggatattaaatttaggatgctttcattttatttgatgcatacactaaacaaatataaagatgtgtaaggagaatttaatcgctaatgg 3045831  T
Q  144 aaaagatatgagatcattatttagaaacttagagcatgtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgcc 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||           |||||||| ||||    
T  3045830 aaaagatatgagatcattatttagaaacttagagcatgtttggtgtacatgataggaagataagatatgataaaac-----------gtttcaattcgcc 3045742  T
Q  244 gtttggtgcatcaataggaaaggataatttaaactcatttctaatcatatcttattcttatttgagtaaattacactctcctctcctcaaagatgcttga 343  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  3045741 gtttggtgcatcaataggaaaggataatttaaactcatttataatcatatcttattcttatttgagtaaattacactcccctcccctcaaagatgcttga 3045642  T
Q  344 attacattcttct 356  Q
    |||| ||||||||    
T  3045641 attaaattcttct 3045629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 181 - 294
Target Start/End: Original strand, 40626414 - 40626527
Alignment:
Q  181 gtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactca 280  Q
    |||| ||||| |||||||||||||| |||||||||||||||||||||| || ||||||| || |||||||||| ||||||||||||||||||||||   |    
T  40626414 gtttcgtgcacatgataggaagacaggatatgataaaactatcatatcttgattcaatctgctgtttggtgcaccaataggaaaggataatttaaatata 40626513  T
Q  281 tttctaatcatatc 294  Q
    ||||||||| ||||    
T  40626514 tttctaatcctatc 40626527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 298
Target Start/End: Original strand, 6457541 - 6457660
Alignment:
Q  179 atgtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaact 278  Q
    |||||||||||| |||||||  ||||| ||||||||| |||||||||||| || ||||||| |  |||||||||| |||||| ||| ||||| |||||      
T  6457541 atgtttggtgcacatgatagagagacaggatatgatagaactatcatatcatgattcaatctgttgtttggtgcaccaatagaaaatgataaattaaatc 6457640  T
Q  279 catttctaatcatatcttat 298  Q
     ||||| |||||||||||||    
T  6457641 aatttccaatcatatcttat 6457660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 270
Target Start/End: Complemental strand, 38490620 - 38490532
Alignment:
Q  182 tttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataa 270  Q
    ||||||||| |  ||||||||||| |||| ||||||||||||||||| |||||||||  |  ||||||||| ||||||| |||||||||    
T  38490620 tttggtgcacagcataggaagacaggataggataaaactatcatatcttgtttcaatttgttgtttggtgcgtcaatagaaaaggataa 38490532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 12414374 - 12414323
Alignment:
Q  302 tatttgagtaaattacactctcctctcctcaaagatgcttgaattacattct 353  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||    
T  12414374 tatttgagtaaattacattctcctcccctcaaagatgtttgaattacattct 12414323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 12426434 - 12426383
Alignment:
Q  302 tatttgagtaaattacactctcctctcctcaaagatgcttgaattacattct 353  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||    
T  12426434 tatttgagtaaattacattctcctcccctcaaagatgtttgaattacattct 12426383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 11052303 - 11052261
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  11052303 gagtaaattacactcccctctcctcaaagatgcttgaattaca 11052261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 11563791 - 11563833
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  11563791 gagtaaattacactctcctcccctcaaagatgcttgaattaca 11563833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 34248148 - 34248100
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  34248148 ttattagagtaaattacactcccctcccctcaaagatgcttgaattaca 34248100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 38972456 - 38972500
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||    
T  38972456 ttgagtaaattacactcccctctcctcaaagatgcttcaattaca 38972500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 307 - 350
Target Start/End: Complemental strand, 32879319 - 32879276
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacat 350  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  32879319 gagtaaattacactctcctcccctcaaagatacttgaattacat 32879276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 352
Target Start/End: Complemental strand, 39160359 - 39160316
Alignment:
Q  309 gtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    ||||||||||||| |||| |||||||||||||||||||||||||    
T  39160359 gtaaattacactcccctcccctcaaagatgcttgaattacattc 39160316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 352
Target Start/End: Original strand, 39208835 - 39208878
Alignment:
Q  309 gtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    ||||||||||||| |||| |||||||||||||||||||||||||    
T  39208835 gtaaattacactcccctcccctcaaagatgcttgaattacattc 39208878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 11796889 - 11796847
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  11796889 gagtaaattacactcccctcccctcaaagatgcttgaattaca 11796847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 17829768 - 17829726
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  17829768 gagtaaattacactcccctcccctcaaagatgcttgaattaca 17829726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 31363888 - 31363930
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||| ||||||||| ||||||||||||||||||||||    
T  31363888 gagtaaattatactctcctcccctcaaagatgcttgaattaca 31363930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 34247377 - 34247419
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  34247377 gagtaaattacactcccctcccctcaaagatgcttgaattaca 34247419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 43657672 - 43657630
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  43657672 gagtaaattacactcccctcccctcaaagatgcttgaattaca 43657630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 6229967 - 6229922
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||    
T  6229967 tttgagtaaattacactcccctcccctcaaagatccttgaattaca 6229922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 7939318 - 7939363
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||    
T  7939318 tttgagtaaattacactctactcccttcaaagatgcttgaattaca 7939363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 20894363 - 20894318
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||    
T  20894363 tttgagtaaattacacgcccctcccctcaaagatgcttgaattaca 20894318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 34173038 - 34173082
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||    
T  34173038 tttgagtaaattacactc-cctcccctcaaagatgcttgaattaca 34173082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 35899129 - 35899174
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| |||||||||||||| |||||||    
T  35899129 tttgagtaaattacactcccctcccctcaaagatgcttcaattaca 35899174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 8314333 - 8314290
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||| |||| || ||||||||||||||||||||||    
T  8314333 tgagtaaattacattctcgtcccctcaaagatgcttgaattaca 8314290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 350
Target Start/End: Original strand, 15006425 - 15006468
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacat 350  Q
    ||||||||||||||| |||| |||||||||| ||||||||||||    
T  15006425 gagtaaattacactcccctcccctcaaagatacttgaattacat 15006468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 346
Target Start/End: Original strand, 33146029 - 33146068
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaatt 346  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  33146029 gagtaaattacactcccctcccctcaaagatgcttgaatt 33146068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 552590 - 552545
Alignment:
Q  303 atttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||| || |||| ||||||||||||||||||||||    
T  552590 atttgagtaaattacattcccctc-cctcaaagatgcttgaattaca 552545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 1366337 - 1366379
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| |||||||| |||||||||||||    
T  1366337 gagtaaattacactcccctcccctcaaagttgcttgaattaca 1366379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 4437306 - 4437348
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| |||| |||||||||||||||||    
T  4437306 gagtaaattacactcccctcccctctaagatgcttgaattaca 4437348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 13873310 - 13873352
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||  ||||||||||||||||||||||    
T  13873310 gagtaaattacactccccttccctcaaagatgcttgaattaca 13873352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 14013435 - 14013477
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||  ||||||||||||||||||||||    
T  14013435 gagtaaattacactccccttccctcaaagatgcttgaattaca 14013477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 17829045 - 17829087
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||  |||| ||||||||||||||||||||||    
T  17829045 gagtaaattacacttccctcccctcaaagatgcttgaattaca 17829087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 20893198 - 20893240
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| ||||  |||||||||||||||||||||    
T  20893198 gagtaaattacactcccctcctctcaaagatgcttgaattaca 20893240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 34173793 - 34173751
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||    
T  34173793 gagtaaattacactcccctcccctcaaagatgtttgaattaca 34173751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 37199679 - 37199637
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||    
T  37199679 gagtaaattacactcccctcccctcaaagatgtttgaattaca 37199637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 353
Target Start/End: Complemental strand, 41521781 - 41521736
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattct 353  Q
    |||||||||||| || |||| ||||||||||||||||||||||||||    
T  41521781 gagtaaattacattc-cctcccctcaaagatgcttgaattacattct 41521736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 42791447 - 42791489
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| |||| |||||||||||||||||    
T  42791447 gagtaaattacactcccctcccctctaagatgcttgaattaca 42791489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 32875155 - 32875200
Alignment:
Q  311 aaattacactctcctctcctcaaagatgcttgaattacattcttct 356  Q
    |||||||||||  ||||||| |||||||||||||||||| ||||||    
T  32875155 aaattacactcatctctcctaaaagatgcttgaattacactcttct 32875200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 33206222 - 33206177
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||  ||| || ||||||||||||||||||||    
T  33206222 tttgagtaaattacacttccctttcttcaaagatgcttgaattaca 33206177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 35657433 - 35657478
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    |||||||||||| ||| ||  |||||||||||||||||||||||||    
T  35657433 gagtaaattacattcttcttccctcaaagatgcttgaattacattc 35657478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 3044922 - 3044974
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattcttctcac 359  Q
    ||||||||||||||  |||  |||||||||||||||||||||| ||| |||||    
T  3044922 gagtaaattacacttcccttccctcaaagatgcttgaattacactctcctcac 3044974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 16111248 - 16111204
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||| ||||||| || |||| ||||||||||||||||||||||    
T  16111248 ttgagtgaattacaatcccctcccctcaaagatgcttgaattaca 16111204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 31709819 - 31709775
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| |||  |||||||||||||| |||||||    
T  31709819 ttgagtaaattacactccccttccctcaaagatgcttaaattaca 31709775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 44332071 - 44332115
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattac 348  Q
    |||||||||||||||||   |||||||||||||| ||||||||||    
T  44332071 tttgagtaaattacacttcactctcctcaaagatacttgaattac 44332115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 171 - 300
Target Start/End: Original strand, 38457668 - 38457801
Alignment:
Q  171 cttagagcatgtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaatag----gaaagg 266  Q
    |||| ||||||||||||||||||| || ||||||| ||||||||||||||||  |||| | ||||||||||||||||||||||||||||     ||||||    
T  38457668 cttaaagcatgtttggtgcatatgttaagaagacatgatatgataaaactatactatcttatttcaatccgccgtttggtgcatcaatacataagaaagg 38457767  T
Q  267 ataatttaaactcatttctaatcatatcttattc 300  Q
    ||||||||||||||||||||||| |||| |||||    
T  38457768 ataatttaaactcatttctaatcctatcctattc 38457801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 48936470 - 48936375
Alignment:
Q  180 tgtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaac 277  Q
    ||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||  |||||||||| ||| |||||  ||||||||||||    
T  48936470 tgtttggtgcataggataggaagacaggatatgataagactatcatatcctgtttcaatccgttgtttggtgcaccaacaggaa--gataatttaaac 48936375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 276
Target Start/End: Original strand, 40416904 - 40416988
Alignment:
Q  192 atgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaa 276  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||||||  |||||||||||||| || ||| ||||| |||||    
T  40416904 atgataggaagacaggatatgaaaaaactatcatatcctgcttcaatccgttgtttggtgcatcaacagaaaatgataaattaaa 40416988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 18364615 - 18364669
Alignment:
Q  295 ttattcttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  18364615 ttattattattagagtaaattacactcccctcccctcaaagatgcttgaattaca 18364669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 33115313 - 33115271
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  33115313 gagtaaattacactctcctcttctcaaagatgcttgaattaca 33115271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 22524883 - 22524838
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  22524883 tttgagtaaattacattctcctcccctcaaagatgcttgaattaca 22524838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 40036475 - 40036430
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    |||||||||||||||||||  |||||||||||||||||||||||||    
T  40036475 gagtaaattacactctcctaccctcaaagatgcttgaattacattc 40036430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 49080688 - 49080643
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  49080688 gagtaaattacactctcctcctctcaaagatgcttgaattacattc 49080643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 13625985 - 13625942
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||| |||| ||||||||||||||||||||||    
T  13625985 tgagtaaattacactcccctcccctcaaagatgcttgaattaca 13625942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 302 - 349
Target Start/End: Complemental strand, 14602194 - 14602147
Alignment:
Q  302 tatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  14602194 tattagagtaaattacactcccctcccctcaaagatgcttgaattaca 14602147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 23309700 - 23309657
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||| |||| ||||||||||||||||||||||    
T  23309700 tgagtaaattacactcccctcccctcaaagatgcttgaattaca 23309657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 5984988 - 5984946
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  5984988 gagtaaattacactcccctcccctcaaagatgcttgaattaca 5984946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 7725485 - 7725443
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  7725485 gagtaaattacactcccctcccctcaaagatgcttgaattaca 7725443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 10688785 - 10688835
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattcttctc 357  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||| ||||    
T  10688785 gagtaaattacactcccctcccctcaaagatgcttgacttacattcctctc 10688835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 10887707 - 10887749
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  10887707 gagtaaattacactcccctcccctcaaagatgcttgaattaca 10887749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 18365360 - 18365318
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  18365360 gagtaaattacactcccctcccctcaaagatgcttgaattaca 18365318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 22130476 - 22130434
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  22130476 gagtaaattacactcccctcccctcaaagatgcttgaattaca 22130434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 25481277 - 25481235
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  25481277 gagtaaattacactcccctcgcctcaaagatgcttgaattaca 25481235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 27256053 - 27256011
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  27256053 gagtaaattacactcccctcccctcaaagatgcttgaattaca 27256011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 44500122 - 44500080
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  44500122 gagtaaattacactctccttccctcaaagatgcttgaattaca 44500080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 4558026 - 4558071
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||    
T  4558026 tttgagtaaattacactcccctccccttaaagatgcttgaattaca 4558071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 27255279 - 27255324
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||    
T  27255279 tttgagtaaattacactcccctcccttcaaagatgcttgaattaca 27255324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 40974030 - 40974075
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||    
T  40974030 tttgagtaaattacactctcctcccctctaagatgtttgaattaca 40974075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 41865766 - 41865721
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||    
T  41865766 tttgagtaaattacactcccctcccctcaaagatacttgaattaca 41865721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 45818772 - 45818683
Alignment:
Q  181 gtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataa 270  Q
    |||||||||  | |||| ||||||| |||||||||| |||||||||||||  || ||||||  ||||||||||||| ||| ||| |||||    
T  45818772 gtttggtgcgaaggataagaagacaggatatgataacactatcatatcctacttaaatccgttgtttggtgcatcagtagcaaaagataa 45818683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 291864 - 291820
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| |||| ||||||| ||||||||||||||    
T  291864 ttgagtaaattacactcccctcccctcaaaaatgcttgaattaca 291820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 3089745 - 3089789
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||    
T  3089745 ttgagtaaattacactcacctcccctcaaagatacttgaattaca 3089789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 4558818 - 4558778
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaatta 347  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  4558818 gagtaaattacactcccctcccctcaaagatgcttgaatta 4558778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 20030657 - 20030613
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacatt 351  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||    
T  20030657 gagtaaattacacttccctcccctcaaagatgcttgaattacatt 20030613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 32737256 - 32737208
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| |||||||||||||||  ||| ||||||||||||||||||||||    
T  32737256 ttattagagtaaattacactcctctcccctcaaagatgcttgaattaca 32737208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 40928243 - 40928199
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacatt 351  Q
    |||||||||||||| |||||| ||||||||||||| |||||||||    
T  40928243 gagtaaattacactatcctcttctcaaagatgcttaaattacatt 40928199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 346
Target Start/End: Complemental strand, 3090497 - 3090458
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaatt 346  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  3090497 gagtaaattacactcccctcccctcaaagatgcttgaatt 3090458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 11056640 - 11056597
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||    
T  11056640 tgagtaaattacactcccctccccttaaagatgcttgaattaca 11056597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 349
Target Start/End: Original strand, 13623167 - 13623214
Alignment:
Q  302 tatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||   ||| ||||||||||||||||||||||    
T  13623167 tatttgagtaaattacacttcactcccctcaaagatgcttgaattaca 13623214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 349
Target Start/End: Original strand, 27396693 - 27396732
Alignment:
Q  310 taaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  27396693 taaattacactctccttccctcaaagatgcttgaattaca 27396732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 1263138 - 1263096
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||| || |||| ||||||||||||||||||||||    
T  1263138 gagtaaattacattcccctcccctcaaagatgcttgaattaca 1263096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 10888483 - 10888441
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| |||||||||||||| |||||||    
T  10888483 gagtaaattacactcccctcccctcaaagatgcttaaattaca 10888441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 11345438 - 11345396
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||| |||| |||| ||||||||||||||||||||||    
T  11345438 gagtaaattaaactcccctcccctcaaagatgcttgaattaca 11345396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 11414559 - 11414517
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| | || ||||||||||||||||||||||    
T  11414559 gagtaaattacactcccatcccctcaaagatgcttgaattaca 11414517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 20612188 - 20612146
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| |||| |||||||||||||||||    
T  20612188 gagtaaattacactcccctcccctctaagatgcttgaattaca 20612146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 23308933 - 23308975
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||    
T  23308933 gagtaaattacactcccctccccttaaagatgcttgaattaca 23308975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 27394249 - 27394291
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| |||||||||||| |||||||||    
T  27394249 gagtaaattacactcccctcccctcaaagatgcatgaattaca 27394291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 32490868 - 32490938
Alignment:
Q  201 agacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataat 271  Q
    ||||| |||||||||| |||||||||| || ||| |||||   |||||||||| ||||| |||||||||||    
T  32490868 agacaggatatgataacactatcatattctatttaaatcctttgtttggtgcaccaatatgaaaggataat 32490938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 37183075 - 37183117
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||    
T  37183075 gagtaaattacactcccctcccctcaaagatgtttgaattaca 37183117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 40035729 - 40035771
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||||| || |||||||||||||||||    
T  40035729 gagtaaattacactcccctctcttctaagatgcttgaattaca 40035771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 40927490 - 40927532
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| |||| |||||||||||||||||    
T  40927490 gagtaaattacactcccctcccctctaagatgcttgaattaca 40927532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 41864974 - 41865016
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| | ||||||||||||||||||||    
T  41864974 gagtaaattacactcccctcccgtcaaagatgcttgaattaca 41865016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 45241198 - 45241240
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||| | |||| ||||||||||||||||||||||    
T  45241198 gagtaaattacacccccctcccctcaaagatgcttgaattaca 45241240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 47794731 - 47794689
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||    
T  47794731 gagtaaattacactctcctccccttaaagatgtttgaattaca 47794689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 53490046 - 53490088
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| | ||||||||||||||||||||    
T  53490046 gagtaaattacactcccctcccttcaaagatgcttgaattaca 53490088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 1262399 - 1262436
Alignment:
Q  312 aattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  1262399 aattacactcccctcccctcaaagatgcttgaattaca 1262436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 19556624 - 19556579
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    ||||| ||||||||| |||| |||||||||| ||||||||||||||    
T  19556624 gagtacattacactcccctcccctcaaagatacttgaattacattc 19556579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 32255803 - 32255762
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||  |||| ||||||||||||||||||||||    
T  32255803 agtaaattacacttccctcccctcaaagatgcttgaattaca 32255762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 37183842 - 37183797
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| ||||  |||||| ||||||||||||||    
T  37183842 tttgagtaaattacactcccctcctctcaaaaatgcttgaattaca 37183797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 4756986 - 4757034
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||| ||||||||||||||||  ||| ||||||||||| ||||||||||    
T  4756986 ttatatgagtaaattacactcctctcccctcaaagatgtttgaattaca 4757034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 11581833 - 11581877
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacatt 351  Q
    ||||||||||||||  |||||||| ||||||| ||||||||||||    
T  11581833 gagtaaattacacttccctctccttaaagatgtttgaattacatt 11581877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 14601417 - 14601457
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaatta 347  Q
    ||||||||||||||| |||| ||||||||||| ||||||||    
T  14601417 gagtaaattacactcccctcccctcaaagatgtttgaatta 14601457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 22516983 - 22517031
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||||| ||||   |||||||| |||||||||||    
T  22516983 ttatttgagtaaattacactcacctcctttcaaagatacttgaattaca 22517031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 24542305 - 24542349
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||| |||||| |||| |||||||||| |||||||||||    
T  24542305 ttgagtaaatcacactcccctcccctcaaagatacttgaattaca 24542349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 300
Target Start/End: Complemental strand, 39795410 - 39795290
Alignment:
Q  180 tgtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactc 279  Q
    ||||||||||  | |||||  ||||| |||||||||| |||||||||||||  || |||  |  |||||||||| |||||| | | ||||| |||||       
T  39795410 tgtttggtgcgcaggatagagagacatgatatgataacactatcatatcctacttaaatatgttgtttggtgcaccaatagaatatgataaattaaatcg 39795311  T
Q  280 atttctaatcatatcttattc 300  Q
    ||| |||||||||||||||||    
T  39795310 attactaatcatatcttattc 39795290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 349
Target Start/End: Complemental strand, 44951063 - 44951023
Alignment:
Q  309 gtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||| |||||||||||||||| ||||| ||||    
T  44951063 gtaaattacactcccctctcctcaaagatgtttgaaataca 44951023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 54606505 - 54606461
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||||| ||| ||| ||| ||||||||||    
T  54606505 ttgagtaaattacactctcctcccctaaaaaatgtttgaattaca 54606461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 26793701 - 26793815
Alignment:
Q  180 tgtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactc 279  Q
    ||||||||||| |||||| ||||||| ||||||||| ||||||||||||||| |||||||||  |||||||||| |||||| ||||||||| |||||||     
T  26793701 tgtttggtgcacatgataagaagacatgatatgatagaactatcatatcctgattcaatccgttgtttggtgcaccaatagaaaaggataacttaaactt 26793800  T
Q  280 atttctaatcatatc 294  Q
    |||||||||| ||||    
T  26793801 atttctaatcctatc 26793815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 4950136 - 4950254
Alignment:
Q  181 gtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactca 280  Q
    |||||||||| |||||| ||| | |||||||||||||  |||| |||| |||||||||  |  ||||||||||||||||| ||| |||||||||||||||    
T  4950136 gtttggtgcacatgataagaaaataagatatgataaacatatcctatcttgtttcaatttgatgtttggtgcatcaatagaaaatgataatttaaactca 4950235  T
Q  281 tttctaatcatatcttatt 299  Q
    |||  ||||||||| ||||    
T  4950236 ttttcaatcatatcctatt 4950254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 9383398 - 9383284
Alignment:
Q  180 tgtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactc 279  Q
    ||||||||| ||| |||||| ||| |||||||||||||||||||| |||||| || |||||   |||||||||| ||||||||| |||||| ||||||      
T  9383398 tgtttggtgtataggatagggagaaaagatatgataaaactatcacatcctgattaaatccattgtttggtgcaccaataggaacggataaattaaacca 9383299  T
Q  280 atttctaatcatatc 294  Q
    |||||||||| ||||    
T  9383298 atttctaatcttatc 9383284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 4076516 - 4076397
Alignment:
Q  181 gtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactca 280  Q
    |||||||||| |||||| | ||| | |||||||||| ||||||||| |||  || |||| |  ||||||||||||||||||||||||||| ||||||  |    
T  4076516 gtttggtgcacatgataaggagataggatatgataacactatcatacccttatttaatctggtgtttggtgcatcaataggaaaggataaattaaaccta 4076417  T
Q  281 tttctaatcatatcttattc 300  Q
    || |||||| |||| |||||    
T  4076416 ttactaatcctatcctattc 4076397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 19806928 - 19806807
Alignment:
Q  181 gtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggt--gcatcaataggaaaggataatttaaact 278  Q
    |||||||||| |||||| | ||| | |||||||||| |||||| ||||||  ||||||| |  |||||||  |||||||||||||||||||| ||||||     
T  19806928 gtttggtgcacatgataaggagataggatatgataacactatcctatccttattcaatctggtgtttggtttgcatcaataggaaaggataaattaaacc 19806829  T
Q  279 catttctaatcatatcttattc 300  Q
     |||||||||| |||| |||||    
T  19806828 tatttctaatcctatcctattc 19806807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 302 - 349
Target Start/End: Complemental strand, 50144136 - 50144089
Alignment:
Q  302 tatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  50144136 tatttgagtaaattacactctcctcccctcaaagatacttgaattaca 50144089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 41322275 - 41322233
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  41322275 gagtaaattacactctcctcccctcaaagatgcttgaattaca 41322233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 352
Target Start/End: Complemental strand, 8061774 - 8061730
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||    
T  8061774 agtaaattacactctcctctcctcaaatatgcttgaattatattc 8061730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 41321505 - 41321549
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  41321505 ttgagtaaattacactcccctcccctcaaagatgcttgaattaca 41321549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 52505282 - 52505330
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  52505282 ttattagagtaaattacactcccctcccctcaaagatgcttgaattaca 52505330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 16536366 - 16536408
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  16536366 gagtaaattacactcccctcccctcaaagatgcttgaattaca 16536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 25813016 - 25813058
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  25813016 gagtaaattacactcgcctcccctcaaagatgcttgaattaca 25813058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 36604721 - 36604763
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  36604721 gagtaaattacactcccctcccctcaaagatgcttgaattaca 36604763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 36605480 - 36605438
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  36605480 gagtaaattacactctcctcccctcaaagatgtttgaattaca 36605438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 41575168 - 41575210
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  41575168 gagtaaattacactcccctcccctcaaagatgcttgaattaca 41575210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 45737994 - 45738036
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  45737994 gagtaaattacactcccctcccctcaaagatgcttgaattaca 45738036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 46683772 - 46683730
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  46683772 gagtaaattacactaccctctcctcaaagatgcttgaattaca 46683730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 47233054 - 47233096
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||| |||||||||| |||||||||||    
T  47233054 gagtaaattacactctcctcccctcaaagatacttgaattaca 47233096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 25069084 - 25069039
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||    
T  25069084 tttgagtaaattacactcccctcccctcaaagatgcatgaattaca 25069039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 33126179 - 33126224
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    ||||||||||||| | |||||||||||||||| |||||||||||||    
T  33126179 gagtaaattacacccccctctcctcaaagatgtttgaattacattc 33126224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 41576091 - 41576046
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||    
T  41576091 gagtaaattacactctcataccctcaaagatgcttgaattacattc 41576046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 269
Target Start/End: Complemental strand, 12855405 - 12855317
Alignment:
Q  181 gtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggata 269  Q
    |||||||||| |||||| | ||||| |||||||||  | ||||||||||| ||| |||||   ||||| |||| |||||||||||||||    
T  12855405 gtttggtgcacatgataaggagacaggatatgatatcattatcatatcctatttaaatccattgtttgatgcaccaataggaaaggata 12855317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 13574241 - 13574193
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattacattcttct 356  Q
    |||||||||||||  |||||||||||||||||||||| |||||| ||||    
T  13574241 agtaaattacacttccctctcctcaaagatgcttgaaatacattattct 13574193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 1845853 - 1845896
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||    
T  1845853 tgagcaaattacactcccctcccctcaaagatgcttgaattaca 1845896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 5785742 - 5785805
Alignment:
Q  207 gatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataa 270  Q
    |||||||||| ||||||||||||| ||  ||||||| || |||||||| | |||||||||||||    
T  5785742 gatatgataacactatcatatcctattcaaatccgctgtctggtgcatgagtaggaaaggataa 5785805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 1846619 - 1846577
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||  |||| ||||||||||||||||||||||    
T  1846619 gagtaaattacacttccctcccctcaaagatgcttgaattaca 1846577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 4601783 - 4601741
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||  ||| ||||||||||||||||||||||    
T  4601783 gagtaaattacactcctctcccctcaaagatgcttgaattaca 4601741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 11917198 - 11917156
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||| | | ||||||||||||||||||    
T  11917198 gagtaaattacactctcctccctttaaagatgcttgaattaca 11917156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 15357679 - 15357637
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| |||||| |||||||||||||||    
T  15357679 gagtaaattacactcccctcccctcaatgatgcttgaattaca 15357637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 25068319 - 25068361
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| || | ||||||||||||||||||||||    
T  25068319 gagtaaattacactccccacccctcaaagatgcttgaattaca 25068361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 347
Target Start/End: Original strand, 28044475 - 28044513
Alignment:
Q  309 gtaaattacactctcctctcctcaaagatgcttgaatta 347  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  28044475 gtaaattacactcttctcccctcaaagatgcttgaatta 28044513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 36509741 - 36509783
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||||||||||||| | ||||||||||    
T  36509741 gagtaaattacactcccctctcctcaaagaggtttgaattaca 36509783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 42830532 - 42830574
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||    
T  42830532 gagtgaattacactctcctcccctcaaagatgtttgaattaca 42830574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 43319910 - 43319952
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||  |||||||||||||||| ||||||||||    
T  43319910 gagtaaattacacttccctctcctcaaagatgtttgaattaca 43319952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 45737299 - 45737341
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||  ||| ||||||||||||||||||||||    
T  45737299 gagtaaattacactcctctcccctcaaagatgcttgaattaca 45737341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 52506053 - 52506012
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  52506053 gagtaaattacactc-cctcccctcaaagatgcttgaattaca 52506012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 347
Target Start/End: Original strand, 7306956 - 7306993
Alignment:
Q  310 taaattacactctcctctcctcaaagatgcttgaatta 347  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  7306956 taaattacactctcctccccttaaagatgcttgaatta 7306993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 344
Target Start/End: Complemental strand, 7842313 - 7842276
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaa 344  Q
    ||||||||||||||||| || |||||||||||||||||    
T  7842313 gagtaaattacactctcatcccctcaaagatgcttgaa 7842276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 16537102 - 16537058
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||||    
T  16537102 tttgagtaaattacactcctctc-cctcaaagatgcttgaattaca 16537058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 42472163 - 42472074
Alignment:
Q  181 gtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataa 270  Q
    |||||||||  | |||| |||||||  ||||||||| ||| |||||||||  || ||||||  ||||||||||||| ||||||| |||||    
T  42472163 gtttggtgcgcaggataagaagacagaatatgataacactgtcatatcctacttaaatccgttgtttggtgcatcagtaggaaatgataa 42472074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 42831284 - 42831239
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| ||| |||||| |||||||||||    
T  42831284 tttgagtaaattacactcccctccccttaaagatacttgaattaca 42831239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 125148 - 125104
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattacat 350  Q
    ||||||||||| |||||||| || | |||||||||||||||||||    
T  125148 tgagtaaattatactctcctttcttgaaagatgcttgaattacat 125104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 25991467 - 25991427
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaatta 347  Q
    ||||||||||||||| |||| |||||||| |||||||||||    
T  25991467 gagtaaattacactcccctcccctcaaagttgcttgaatta 25991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 28971541 - 28971497
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacatt 351  Q
    ||||||||||||||| |||| | ||||||||| ||||||||||||    
T  28971541 gagtaaattacactcccctcccgtcaaagatgtttgaattacatt 28971497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 37418822 - 37418870
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattacattcttct 356  Q
    ||||||||||||||  ||  | |||||||||||||||||||||||||||    
T  37418822 agtaaattacactccacttccttcaaagatgcttgaattacattcttct 37418870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 172 - 300
Target Start/End: Complemental strand, 8547614 - 8547486
Alignment:
Q  172 ttagagcatgtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataat 271  Q
    ||||||| ||||| ||||| |||||||||| |||  |||||||||||| ||  |||| |||||||||||||||||||| ||||||||||||||||||||     
T  8547614 ttagagcctgtttcgtgcacatgataggaaaacagaatatgataaaacaattctatcatgtttcaatccgccgtttggagcatcaataggaaaggataac 8547515  T
Q  272 ttaaactcatttctaatcatatcttattc 300  Q
    ||||||  |||||||||| |||| |||||    
T  8547514 ttaaacctatttctaatcttatcatattc 8547486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 172 - 300
Target Start/End: Complemental strand, 8573967 - 8573839
Alignment:
Q  172 ttagagcatgtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataat 271  Q
    ||||||| ||||| ||||| |||||| ||| |||  |||||||||||| ||  |||||||||||||||| |||||||| |||||||||||||| |||||     
T  8573967 ttagagcctgtttcgtgcacatgataagaaaacagaatatgataaaacaattctatcctgtttcaatcctccgtttggagcatcaataggaaatgataac 8573868  T
Q  272 ttaaactcatttctaatcatatcttattc 300  Q
    ||||||  |||||||||| |||| |||||    
T  8573867 ttaaacctatttctaatcttatcatattc 8573839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 14228044 - 14227984
Alignment:
Q  181 gtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccg 241  Q
    |||||||||||| |||| ||||||| ||||||||||||||||| |||||| ||||||||||    
T  14228044 gtttggtgcataggataagaagacatgatatgataaaactatcttatcctatttcaatccg 14227984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 14313186 - 14313236
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattcttctc 357  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  14313186 gagtaaattacactcccctcccctcaaagatgcttgaattacattcctctc 14313236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 32521818 - 32521872
Alignment:
Q  295 ttattcttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| ||||| |||||||||||||||||||| |||||||||| |||||||||||    
T  32521818 ttattgttattagagtaaattacactctcctcccctcaaagatacttgaattaca 32521872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 2523420 - 2523375
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||    
T  2523420 tttgagtaaattacactcccctcccctcaaagatgcttgaattaca 2523375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 345
Target Start/End: Complemental strand, 32003948 - 32003907
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaat 345  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  32003948 tttgagtaaattacactctcctcccctcaaagatgcttgaat 32003907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 357
Target Start/End: Complemental strand, 34250791 - 34250738
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattacattcttctc 357  Q
    |||||||||| |||||||||||| | |||||||||||||||||||| |||||||    
T  34250791 tttgagtaaactacactctcctcccttcaaagatgcttgaattacactcttctc 34250738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 34709999 - 34709955
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  34709999 ttgagtaaattacactcccctcccctcaaagatgcttgaattaca 34709955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 12766940 - 12766983
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||    
T  12766940 tgagtaaattacactctcctccccttaaagatgcttgaattaca 12766983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 187764 - 187806
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  187764 gagtaaattacattctcctcccctcaaagatgcttgaattaca 187806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 7127737 - 7127695
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  7127737 gagtaaattacactcccctcccctcaaagatgcttgaattaca 7127695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 9241619 - 9241577
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  9241619 gagtaaattacactcccctcccctcaaagatgcttgaattaca 9241577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 11522794 - 11522836
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  11522794 gagtaaattacactcccctcccctcaaagatgcttgaattaca 11522836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 11523557 - 11523515
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  11523557 gagtaaattacactcccctcccctcaaagatgcttgaattaca 11523515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 12025511 - 12025553
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  12025511 gagtaaattacactcccctcccctcaaagatgcttgaattaca 12025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 12693840 - 12693882
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  12693840 gagtaaattacactcccctcccctcaaagatgcttgaattaca 12693882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 353
Target Start/End: Original strand, 14306786 - 14306832
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattct 353  Q
    ||||||||||||||| |||| | ||||||||||||||||||||||||    
T  14306786 gagtaaattacactcccctcccttcaaagatgcttgaattacattct 14306832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 14313941 - 14313887
Alignment:
Q  295 ttattcttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| ||||| ||||||||||||||| | || ||||||||||||||||||||||    
T  14313941 ttattattattagagtaaattacactcccatcccctcaaagatgcttgaattaca 14313887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 14873012 - 14873054
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  14873012 gagtaaattacactcccctcccctcaaagatgcttgaattaca 14873054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 25527724 - 25527766
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  25527724 gagtaaattacactcccctcccctcaaagatgcttgaattaca 25527766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 32114487 - 32114445
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  32114487 gagtaaattacactctccttccctcaaagatgcttgaattaca 32114445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 14873780 - 14873735
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| | || ||||||||||||||||||||||    
T  14873780 tttgagtaaattacactcccatcccctcaaagatgcttgaattaca 14873735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 25577284 - 25577239
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  25577284 tttgagtaaattacactcccctcccctcaaagaagcttgaattaca 25577239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 2661146 - 2661194
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||||   ||| ||||||||||||||||||||||    
T  2661146 ttatttgagtaaattacacttctctcccctcaaagatgcttgaattaca 2661194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 7448972 - 7448928
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| |||| ||||||| ||||||||||||||    
T  7448972 ttgagtaaattacactcccctcccctcaaaaatgcttgaattaca 7448928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 18596797 - 18596741
Alignment:
Q  182 tttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaat 238  Q
    |||| ||||||| |||| |||||| |||||||||||||||||||||| || ||||||    
T  18596797 tttgatgcatataatagaaagacatgatatgataaaactatcatatcttgattcaat 18596741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 30462196 - 30462152
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacatt 351  Q
    |||||||||||||| ||||| |||||||||||||||| |||||||    
T  30462196 gagtaaattacactttcctcccctcaaagatgcttgagttacatt 30462152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 349
Target Start/End: Complemental strand, 14224575 - 14224528
Alignment:
Q  302 tatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||| ||||||||||||||||| |  ||||||||||||||||||||||    
T  14224575 tattagagtaaattacactctcattccctcaaagatgcttgaattaca 14224528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 230
Target Start/End: Original strand, 30121980 - 30122015
Alignment:
Q  195 ataggaagacaagatatgataaaactatcatatcct 230  Q
    ||||||||||||||| ||||||||||||||||||||    
T  30121980 ataggaagacaagatgtgataaaactatcatatcct 30122015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 349
Target Start/End: Original strand, 34709247 - 34709294
Alignment:
Q  302 tatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||| |||||||||||| || |||| ||||||||||||||||||||||    
T  34709247 tattagagtaaattacaatcccctcccctcaaagatgcttgaattaca 34709294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 129204 - 129150
Alignment:
Q  246 ttggtgcatcaataggaaaggataatttaaactcatttctaatcatatcttattc 300  Q
    |||||||||||||||||||  |||| |||||||||||| ||||| |||| |||||    
T  129204 ttggtgcatcaataggaaaaaataacttaaactcatttttaatcctatcatattc 129150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 3767826 - 3767784
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||    
T  3767826 gagtaaattatactctcctcccctcaaagatgtttgaattaca 3767784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 5443770 - 5443728
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||| |||| |||| ||||||||||||||||||||||    
T  5443770 gagtaaattatactcccctcccctcaaagatgcttgaattaca 5443728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 349
Target Start/End: Original strand, 7448227 - 7448265
Alignment:
Q  311 aaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  7448227 aaattacactctccttccctcaaagatgcttgaattaca 7448265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 10702265 - 10702307
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||  ||| ||||||||||||||||||||||    
T  10702265 gagtaaattacactcatctcccctcaaagatgcttgaattaca 10702307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 10703014 - 10702972
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  10703014 gagtaaattacactctcattccctcaaagatgcttgaattaca 10702972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 12026277 - 12026235
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| ||||  |||||||||||||||||||||    
T  12026277 gagtaaattacactcccctcctctcaaagatgcttgaattaca 12026235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 12033197 - 12033155
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| ||||  |||||||||||||||||||||    
T  12033197 gagtaaattacactcccctccgctcaaagatgcttgaattaca 12033155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 16342811 - 16342753
Alignment:
Q  207 gatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaag 265  Q
    |||||||| ||| ||||||||| ||  |||||| || ||||||||||||||||||||||    
T  16342811 gatatgattaaagtatcatatcttgactcaatctgctgtttggtgcatcaataggaaag 16342753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 21802684 - 21802642
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||||  || ||||||||||||||||||    
T  21802684 gagtaaattacactctcctcctctaaaagatgcttgaattaca 21802642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 25528497 - 25528455
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||| | |||| ||||||||||||||||||||||    
T  25528497 gagtaaattacacacccctcccctcaaagatgcttgaattaca 25528455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 349
Target Start/End: Complemental strand, 31882585 - 31882547
Alignment:
Q  311 aaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  31882585 aaattacactctcctcccctcaaagatgtttgaattaca 31882547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 345
Target Start/End: Original strand, 33950220 - 33950258
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaat 345  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  33950220 gagtaaattacactcccctcccctcaaagatgcttgaat 33950258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 129359 - 129318
Alignment:
Q  197 aggaagacaagatatgataaaactatcatatcctgtttcaat 238  Q
    ||||||||||||| |||||||||||| ||||| |||||||||    
T  129359 aggaagacaagatgtgataaaactattatatcatgtttcaat 129318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 12767689 - 12767644
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||||||| | ||| ||||||||||||    
T  12767689 tttgagtaaattacactcccctctcctaagagaagcttgaattaca 12767644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 34280007 - 34280052
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| | ||||||||| ||||||||||    
T  34280007 tttgagtaaattacactcccctcccttcaaagatgtttgaattaca 34280052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 188515 - 188471
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| |||| | | ||||||||||||||||||    
T  188515 ttgagtaaattacactcccctccctttaaagatgcttgaattaca 188471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 22021963 - 22022007
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattac 348  Q
    |||||||||||||||||   |||||||||||||| ||||||||||    
T  22021963 tttgagtaaattacacttcactctcctcaaagatacttgaattac 22022007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 6e-25; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 32529548 - 32529427
Alignment:
Q  181 gtttggtgcatatgataggaagacaagatatgataaaactatcatat--cctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaact 278  Q
    ||||| |||| |||||| |||||||||||||||||||||||||||||  | |  |||||||||| |||||||||| |||||  |||| |||| |||||||    
T  32529548 gtttgatgcacatgataagaagacaagatatgataaaactatcatatatcttacttcaatccgctgtttggtgcaccaataaaaaagaataaattaaact 32529449  T
Q  279 catttctaatcatatcttattc 300  Q
     |||||||||||||||||||||    
T  32529448 tatttctaatcatatcttattc 32529427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 15416395 - 15416346
Alignment:
Q  182 tttggtgcatatgataggaagacaagatatgataaaactatcatatcctg 231  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  15416395 tttggtgcacatgataggaagacatgatatgataaaactatcatatcctg 15416346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 31477047 - 31477002
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  31477047 tttgagtaaattacactcccctctcctcaaagatgcttgaattaca 31477002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 14594823 - 14594780
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  14594823 tgagtaaattacactcacctctcctcaaagatgcttgaattaca 14594780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 17781124 - 17781082
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  17781124 gagtaaattacactctcctcccctcaaagatgcttgaattaca 17781082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 19408534 - 19408576
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  19408534 gagtaaattacactctcctcccctcaaagatgcttgaattaca 19408576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 353
Target Start/End: Complemental strand, 20541061 - 20541015
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattct 353  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  20541061 gagtaaattacactcccctcccctcaaagatgcttgaattacattct 20541015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 35751499 - 35751553
Alignment:
Q  295 ttattcttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| || |||||||||||||||||| |||| ||||||||||||||||||||||    
T  35751499 ttattattttttgagtaaattacactcccctcccctcaaagatgcttgaattaca 35751553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 3934064 - 3934016
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||    
T  3934064 ttatatgagtaaattacactctcttcccctcaaagatgcttgaattaca 3934016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 24625580 - 24625532
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  24625580 ttattagagtaaattacactcccctcccctcaaagatgcttgaattaca 24625532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 352
Target Start/End: Original strand, 32020460 - 32020504
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    |||||||||||||| |||| |||||||||||||||||||||||||    
T  32020460 agtaaattacactcccctcccctcaaagatgcttgaattacattc 32020504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 8572693 - 8572736
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||    
T  8572693 tgagtaaattacactctcctcccctcaaaaatgcttgaattaca 8572736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 31850740 - 31850697
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||| |||| ||||||||||||||||||||||    
T  31850740 tgagtaaattacactcccctcccctcaaagatgcttgaattaca 31850697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 34731240 - 34731303
Alignment:
Q  207 gatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataa 270  Q
    |||||||||| ||||||||||||| ||| |||||   |||||||||| ||||||||||||||||    
T  34731240 gatatgataacactatcatatcctatttaaatcccttgtttggtgcaccaataggaaaggataa 34731303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 37657375 - 37657418
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||| |||| ||||||||||||||||||||||    
T  37657375 tgagtaaattacactcccctcccctcaaagatgcttgaattaca 37657418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 9119627 - 9119585
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  9119627 gagtaaattacactcccctcccctcaaagatgcttgaattaca 9119585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 13685963 - 13686005
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| ||||||||||||||| |||||||||||    
T  13685963 gagtaaattacactcccctctcctcaaagatccttgaattaca 13686005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 14594064 - 14594106
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  14594064 gagtaaattacactctcctcccctcaaagatgtttgaattaca 14594106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 20691109 - 20691151
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  20691109 gagtaaattacactcccctcccctcaaagatgcttgaattaca 20691151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 37333898 - 37333940
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  37333898 gagtaaattacactcccctcccctcaaagatgcttgaattaca 37333940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 4054723 - 4054768
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||    
T  4054723 tttgagtaaattacactcccctcccctcaaagatgcatgaattaca 4054768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 18524443 - 18524398
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    |||||||| |||||| |||| |||||||||||||||||||||||||    
T  18524443 gagtaaatcacactcccctcccctcaaagatgcttgaattacattc 18524398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 20691876 - 20691835
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  20691876 agtaaattacactcccctcccctcaaagatgcttgaattaca 20691835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 15175199 - 15175242
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||||   ||||||||||||||||||||    
T  15175199 tgagtaaattacactctcctcctttcaaagatgcttgaattaca 15175242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 18523722 - 18523765
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||||| | |||||||| |||||||||||    
T  18523722 tgagtaaattacactctcctcccttcaaagattcttgaattaca 18523765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 345
Target Start/End: Complemental strand, 20570900 - 20570869
Alignment:
Q  314 ttacactctcctctcctcaaagatgcttgaat 345  Q
    ||||||||||||||||||||||||||||||||    
T  20570900 ttacactctcctctcctcaaagatgcttgaat 20570869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 36742113 - 36742156
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaatta 347  Q
    ||||||||||||||| || |||| ||||||||||||||||||||    
T  36742113 tttgagtaaattacattcccctcccctcaaagatgcttgaatta 36742156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 36762108 - 36762151
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||    
T  36762108 tgagtaaattactctcccctcccctcaaagatgcttgaattaca 36762151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 4055488 - 4055446
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| || | ||||||||||||||||||||||    
T  4055488 gagtaaattacactccccacccctcaaagatgcttgaattaca 4055446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 6029449 - 6029491
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||  |||| ||||||||||||||||||||||    
T  6029449 gagtaaattacacttccctcccctcaaagatgcttgaattaca 6029491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 15145158 - 15145116
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||  ||| ||||||||||||||||||||||    
T  15145158 gagtaaattacactcaactcccctcaaagatgcttgaattaca 15145116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 21639013 - 21639055
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| || | ||||||||||||||||||||    
T  21639013 gagtaaattacactctcatcccttcaaagatgcttgaattaca 21639055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 24624813 - 24624854
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  24624813 gagtaaattacactc-cctcccctcaaagatgcttgaattaca 24624854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 27979226 - 27979268
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||  ||||||| ||||||||||||||||||||||    
T  27979226 gagtaaattaccatctcctcccctcaaagatgcttgaattaca 27979268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 27979979 - 27979937
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||    
T  27979979 gagtaaattacactcccctcccctcaaagatgtttgaattaca 27979937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 32458624 - 32458582
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| |||||||||||||| |||||||    
T  32458624 gagtaaattacactcccctcccctcaaagatgcttaaattaca 32458582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 36737528 - 36737486
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||    
T  36737528 gagtaaattacactcccctccccttaaagatgcttgaattaca 36737486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 37334667 - 37334625
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| | ||||||||||||||||||||    
T  37334667 gagtaaattacactcccctcccttcaaagatgcttgaattaca 37334625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 349
Target Start/End: Complemental strand, 1199819 - 1199782
Alignment:
Q  312 aattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  1199819 aattacactcccctcccctcaaagatgcttgaattaca 1199782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 6031431 - 6031386
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||  ||| ||||||||||| ||||||||||    
T  6031431 tttgagtaaattacactcctctcccctcaaagatgtttgaattaca 6031386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 16290868 - 16290799
Alignment:
Q  201 agacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataa 270  Q
    ||||| |||||||||||| |||| |||||||||| |||||   |||||||||  | ||||||||||||||    
T  16290868 agacaggatatgataaaattatcttatcctgtttaaatcctttgtttggtgctcccataggaaaggataa 16290799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 20184096 - 20184051
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||  |||| | ||||||||||||||||||||    
T  20184096 tttgagtaaattacacttccctcccttcaaagatgcttgaattaca 20184051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 21639767 - 21639722
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    ||||||||||||||| |||| | |||||||| ||||||||||||||    
T  21639767 gagtaaattacactcccctcccttcaaagatccttgaattacattc 21639722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 31601626 - 31601581
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||  |||| ||| ||||||||||||||||||    
T  31601626 tttgagtaaattacacttccctccccttaaagatgcttgaattaca 31601581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 17780339 - 17780383
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||| || ||  |||||||||||||||||||||    
T  17780339 ttgagtaaattacactttcttcctctcaaagatgcttgaattaca 17780383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 17967814 - 17967858
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacatt 351  Q
    ||||||||||||||| ||||   ||||||||||||||||||||||    
T  17967814 gagtaaattacactcccctcctatcaaagatgcttgaattacatt 17967858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 42598317 - 42598357
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaatta 347  Q
    |||||||||||||||||||  |||||||| |||||||||||    
T  42598317 gagtaaattacactctccttccctcaaagctgcttgaatta 42598357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 181 - 294
Target Start/End: Complemental strand, 41482590 - 41482477
Alignment:
Q  181 gtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactca 280  Q
    |||||||||| |||||||||||||| |||| |||||||||||||| ||||| || ||| ||| |||||||||| ||| |||||||||||| ||||||  |    
T  41482590 gtttggtgcacatgataggaagacatgataggataaaactatcatctcctgatttaatgcgctgtttggtgcaccaacaggaaaggataacttaaaccta 41482491  T
Q  281 tttctaatcatatc 294  Q
    ||| ||||||||||    
T  41482490 tttttaatcatatc 41482477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 294
Target Start/End: Original strand, 39644849 - 39644962
Alignment:
Q  181 gtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactca 280  Q
    ||||||||||  ||||||||||||| |||||||||||||||||||||| | |||||||  |  |||||||||  |||||| ||||||||| |||||| ||    
T  39644849 gtttggtgcacgtgataggaagacaggatatgataaaactatcatatcatatttcaatttgttgtttggtgcgccaatagaaaaggataacttaaaccca 39644948  T
Q  281 tttctaatcatatc 294  Q
    ||| ||||| ||||    
T  39644949 tttataatcctatc 39644962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 297 - 357
Target Start/End: Original strand, 22263748 - 22263808
Alignment:
Q  297 attcttatttgagtaaattacactctcctctcctcaaagatgcttgaattacattcttctc 357  Q
    |||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  22263748 attcttttttgagtaaattacactcccctcctctcaaagatgcttgaattacattcttctc 22263808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 32388230 - 32388185
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  32388230 tttgagtaaattacattctcctctcctcaaagatgcttgaattaca 32388185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 2790073 - 2790117
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  2790073 ttgagtaaattacactctcctctcctcaaagatgtttgaattaca 2790117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 299
Target Start/End: Complemental strand, 23319097 - 23318990
Alignment:
Q  192 atgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactcatttctaatcat 291  Q
    |||||| ||||||| |||||||||| |||||||||||||| || |||| |  ||||||| || ||| | |||||||||||||||||  |||| ||||| |    
T  23319097 atgataagaagacaggatatgataacactatcatatcctgattaaatctgttgtttggtccaccaacatgaaaggataatttaaacctatttttaatcct 23318998  T
Q  292 atcttatt 299  Q
    ||| ||||    
T  23318997 atcctatt 23318990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 297
Target Start/End: Original strand, 24429633 - 24429751
Alignment:
Q  180 tgtttggtgcatatgataggaagacaagatatgataaaactatca-tatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaact 278  Q
    ||||||||||| | ||||||||||| | ||||||||||||||||| ||||||| |||| || || | ||| |||| |||||| ||| |||||||||||      
T  24429633 tgtttggtgcacaagataggaagacgaaatatgataaaactatcattatcctgattcattctgctgcttgatgcaccaatagaaaatgataatttaaaac 24429732  T
Q  279 catttctaatcatatctta 297  Q
     |||| ||||| |||||||    
T  24429733 tatttataatcctatctta 24429751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 36848576 - 36848527
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattacattcttctc 357  Q
    |||||||||||||| |||||||| |||||||||||||||||| |||||||    
T  36848576 agtaaattacactcccctctccttaaagatgcttgaattacactcttctc 36848527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 40343750 - 40343795
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  40343750 tttgagtaaattatactctcctcccctcaaagatgcttgaattaca 40343795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 294
Target Start/End: Complemental strand, 45884807 - 45884698
Alignment:
Q  185 ggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactcatttc 284  Q
    |||||| |||||||||| ||| |||||||||||| ||||||||| || ||||||  |  |||| ||||| || || ||| ||||||||||||  |||||     
T  45884807 ggtgcacatgataggaaaacaggatatgataaaattatcatatcttgattcaatatgttgtttagtgcaccagtatgaatggataatttaaaaccatttt 45884708  T
Q  285 taatcatatc 294  Q
    ||||||||||    
T  45884707 taatcatatc 45884698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 11639885 - 11639933
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  11639885 ttattagagtaaattacactcccctcccctcaaagatgcttgaattaca 11639933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 317272 - 317315
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||| |||| ||||||||||||||||||||||    
T  317272 tgagtaaattacactcccctcccctcaaagatgcttgaattaca 317315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 318038 - 317995
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||| |||| ||||||||||||||||||||||    
T  318038 tgagtaaattacactcccctcccctcaaagatgcttgaattaca 317995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 38669989 - 38670032
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||| |||||||| ||||||||||||||||||    
T  38669989 tgagtaaattacactcccctctccttaaagatgcttgaattaca 38670032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 2146954 - 2146912
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  2146954 gagtaaattacactcccctcccctcaaagatgcttgaattaca 2146912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 351
Target Start/End: Original strand, 3340770 - 3340812
Alignment:
Q  309 gtaaattacactctcctctcctcaaagatgcttgaattacatt 351  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  3340770 gtaaattacactcccctcccctcaaagatgcttgaattacatt 3340812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 6185412 - 6185370
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  6185412 gagtaaattacactcccctcccctcaaagatgcttgaattaca 6185370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 6191928 - 6191886
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  6191928 gagtaaattacactcccctcccctcaaagatgcttgaattaca 6191886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 8122622 - 8122664
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  8122622 gagtaaattacactcccctcccctcaaagatgcttgaattaca 8122664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 351
Target Start/End: Complemental strand, 8123367 - 8123317
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattacatt 351  Q
    |||| |||||||||||||||| |||| ||||||| ||||||||||||||||    
T  8123367 ttatatgagtaaattacactcccctcccctcaaaaatgcttgaattacatt 8123317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 19156155 - 19156113
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||| |||||||||||||||||||||||| ||||||||||    
T  19156155 gagtaaactacactctcctctcctcaaagatgtttgaattaca 19156113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 20755554 - 20755512
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||| |||||||||||||||||||||||| ||||||||||    
T  20755554 gagtaaactacactctcctctcctcaaagatgtttgaattaca 20755512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 25606919 - 25606961
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  25606919 gagtaaattacactcccctcccctcaaagatgcttgaattaca 25606961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 30738185 - 30738227
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  30738185 gagtaaattacactccgctctcctcaaagatgcttgaattaca 30738227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 31220793 - 31220843
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattcttctc 357  Q
    ||||||||||||||| |||| | |||||||||||||||||||| |||||||    
T  31220793 gagtaaattacactcccctcccttcaaagatgcttgaattacactcttctc 31220843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 38670763 - 38670721
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  38670763 gagtaagttacactcccctctcctcaaagatgcttgaattaca 38670721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 357
Target Start/End: Complemental strand, 40189144 - 40189094
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattcttctc 357  Q
    ||||||||||||||||| || | |||||||||||||||||||| |||||||    
T  40189144 gagtaaattacactctcatcccttcaaagatgcttgaattacagtcttctc 40189094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 40401631 - 40401589
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||| | ||||||||||||||||||||    
T  40401631 gagtaaattacactctcctcccttcaaagatgcttgaattaca 40401589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 2146028 - 2146073
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||    
T  2146028 tttgagtaaattacactcccctcccttcaaagatgcttgaattaca 2146073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 2334148 - 2334037
Alignment:
Q  192 atgataggaagacaagatatgataaaactatcatatcctg---tttcaatccgccgtttggtgcatcaataggaaaggataatttaaactcatttctaat 288  Q
    |||||| | ||||| |||||||||| ||||||||||||||    |||||||||  |||||||||| ||||||||  |||||| ||||||  |||| ||||    
T  2334148 atgataaggagacatgatatgataacactatcatatcctgaatattcaatccggtgtttggtgcaccaataggattggataacttaaacctatttttaat 2334049  T
Q  289 catatcttattc 300  Q
    | |||| |||||    
T  2334048 cctatcctattc 2334037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 348
Target Start/End: Original strand, 36847827 - 36847868
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattac 348  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  36847827 gagtaaattacactcccctcccctcaaagatgcttgaattac 36847868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 36890161 - 36890112
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattacattcttctc 357  Q
    ||||||||||||||||||  | |||||||||||||||||||| |||||||    
T  36890161 agtaaattacactctccttccttcaaagatgcttgaattacactcttctc 36890112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 48982621 - 48982576
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||| |||| |||||||||||| ||||||||||||||    
T  48982621 tttgagtaaattatactcccctctcctcaaatatgcttgaattaca 48982576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 20261698 - 20261650
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||| | || |||| ||||||||||||||||||||||    
T  20261698 ttatttgagtaaattatattcccctcccctcaaagatgcttgaattaca 20261650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 38790065 - 38790109
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||| || |||| ||||||||||||||||||||||    
T  38790065 ttgagtaaattacaatcccctcccctcaaagatgcttgaattaca 38790109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 5784320 - 5784375
Alignment:
Q  245 tttggtgcatcaataggaaaggataatttaaactcatttctaatcatatcttattc 300  Q
    |||||||||||||||  ||||||||| ||||||| |||||||||| |||| |||||    
T  5784320 tttggtgcatcaataaaaaaggataagttaaacttatttctaatcgtatcatattc 5784375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 349
Target Start/End: Complemental strand, 8535518 - 8535471
Alignment:
Q  302 tatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||| |||| | ||||||||| ||||||||||    
T  8535518 tatttgagtaaattacactcccctcccgtcaaagatgtttgaattaca 8535471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 23742738 - 23742687
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattcttctca 358  Q
    ||||||||||||||| |||| |||| ||||||||||||||||| || |||||    
T  23742738 gagtaaattacactcccctcccctctaagatgcttgaattacactcatctca 23742687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 38790821 - 38790778
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||    
T  38790821 tgagtaaattacattctcctcccctcaaagatgtttgaattaca 38790778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 48872755 - 48872712
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||| |||||  ||||||||||||||||||||    
T  48872755 tgagtaaattacactcccctcttatcaaagatgcttgaattaca 48872712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 5228718 - 5228676
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| | ||||||||||||||||||||    
T  5228718 gagtaaattacactcccctcccttcaaagatgcttgaattaca 5228676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 6184647 - 6184689
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||    
T  6184647 gagtaaattacactcccctcccctcaaagatgtttgaattaca 6184689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 14753956 - 14753914
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||| | |||||||| |||||||||||    
T  14753956 gagtaaattacactctcctcccttcaaagatacttgaattaca 14753914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 20260999 - 20261041
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||  |||||||||||||||||| ||||||||    
T  20260999 gagtaaattacacttccctctcctcaaagatgctggaattaca 20261041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 351
Target Start/End: Complemental strand, 24679969 - 24679923
Alignment:
Q  306 tgagtaaattacactctcctc-tcctcaaagatgcttgaattacatt 351  Q
    ||||||||||||| ||||||| |||||||||||| ||||||||||||    
T  24679969 tgagtaaattacattctcctcctcctcaaagatgtttgaattacatt 24679923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 27144176 - 27144218
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| |||||||||||||| |||||||    
T  27144176 gagtaaattacactcccctcccctcaaagatgcttaaattaca 27144218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 357
Target Start/End: Complemental strand, 27144920 - 27144870
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattcttctc 357  Q
    ||||||||||||| |||||| | | |||||||||||||||||| |||||||    
T  27144920 gagtaaattacaccctcctccctttaaagatgcttgaattacactcttctc 27144870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 31221535 - 31221493
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  31221535 gagtaaattacactcctctctcttcaaagatgcttgaattaca 31221493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 32867981 - 32867940
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| ||| |||||||||||||||||||||||    
T  32867981 gagtaaattacactc-cctttcctcaaagatgcttgaattaca 32867940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 42813658 - 42813616
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  42813658 gagtaaattacactctcattccctcaaagatgcttgaattaca 42813616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 48981868 - 48981910
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||  |||| ||||||||||||||||||||||    
T  48981868 gagtaaattacacttccctcccctcaaagatgcttgaattaca 48981910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 344
Target Start/End: Original strand, 552841 - 552878
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaa 344  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  552841 gagtaaattacactcttctctcctaaaagatgcttgaa 552878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 349
Target Start/End: Complemental strand, 20261656 - 20261619
Alignment:
Q  312 aattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||| || ||||||||||||||||||||||    
T  20261656 aattacactctcatcccctcaaagatgcttgaattaca 20261619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 345
Target Start/End: Complemental strand, 22264519 - 22264478
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaat 345  Q
    |||||||||||||||||| | || ||||||||||||||||||    
T  22264519 tttgagtaaattacactcacatcgcctcaaagatgcttgaat 22264478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 29200721 - 29200676
Alignment:
Q  195 ataggaagacaagatatgataaaactatcatatcctgtttcaatcc 240  Q
    |||||||||| | ||||||||||||||||||||| || ||||||||    
T  29200721 ataggaagacgatatatgataaaactatcatatcttgattcaatcc 29200676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 32867239 - 32867284
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    |||||||||| |||| |||| | |||||||||||||||||||||||    
T  32867239 gagtaaattatactcccctcccttcaaagatgcttgaattacattc 32867284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 38096026 - 38095985
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattac 348  Q
    ||||||||||||||| ||||  ||||||||||||||||||||    
T  38096026 gagtaaattacactcccctcctctcaaagatgcttgaattac 38095985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 300
Target Start/End: Original strand, 39594606 - 39594699
Alignment:
Q  207 gatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactcatttctaatcatatcttattc 300  Q
    ||||||||||||||||||||||||  || ||||||  |||||||||| ||||| || | | ||| ||||||  ||| |||||| |||| |||||    
T  39594606 gatatgataaaactatcatatcctacttaaatccgttgtttggtgcaccaataagatatgctaaattaaacctattactaatcttatcatattc 39594699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 40400894 - 40400939
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||  |||  ||||||||||||||||||||||    
T  40400894 tttgagtaaattacacttcccttccctcaaagatgcttgaattaca 40400939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 41147965 - 41147920
Alignment:
Q  244 gtttggtgcatcaataggaaaggataatttaaactcatttctaatc 289  Q
    ||||||||||||||||| ||||||||| ||||||| |||| |||||    
T  41147965 gtttggtgcatcaatagaaaaggataaattaaacttatttataatc 41147920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 42813018 - 42813059
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||| ||| | |||||||||||||||||||||||||    
T  42813018 agtaaattactctcccatctcctcaaagatgcttgaattaca 42813059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 46011198 - 46011157
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||  ||| ||||||||||||||||||||||    
T  46011198 agtaaattacactcctctcccctcaaagatgcttgaattaca 46011157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 3341526 - 3341478
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||||   |  ||||||||||||||||||||||    
T  3341526 ttatttgagtaaattacactccatttccctcaaagatgcttgaattaca 3341478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 36687290 - 36687333
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| |||| ||| ||||||||||||||||||    
T  36687290 ttgagtaaattacactcccctc-ccttaaagatgcttgaattaca 36687333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 38504010 - 38503906
Alignment:
Q  180 tgtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactc 279  Q
    ||||||||||| ||  |||||||||| |||| |||||||||||||||||||||||||||  |  |||||||||| ||| ||||||| |||| ||||||||    
T  38504010 tgtttggtgcacat--taggaagacatgataggataaaactatcatatcctgtttcaatttgttgtttggtgcaccaa-aggaaagaataacttaaactc 38503914  T
Q  280 atttctaa 287  Q
    | ||||||    
T  38503913 acttctaa 38503906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 556724 - 556843
Alignment:
Q  181 gtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactca 280  Q
    ||||| |||| |||||| | ||| | ||||||||||| | ||||||||||| | ||| |||| |||| ||||| |||||| ||| ||||| ||||||  |    
T  556724 gtttgatgcacatgataaggagataggatatgataaaccaatcatatcctgatccaaaccgctgtttcgtgcaacaatagaaaatgataaattaaaccta 556823  T
Q  281 tttctaatcatatcttattc 300  Q
    |||||||||||||| |||||    
T  556824 tttctaatcatatcctattc 556843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 34925495 - 34925444
Alignment:
Q  302 tatttgagtaaattacactctcctctcctcaaagatgcttgaattacattct 353  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  34925495 tatttgagtaaattacacttccctcccctcaaagatgcttgaattacattct 34925444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 29726476 - 29726430
Alignment:
Q  303 atttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||    
T  29726476 atttgagtaaattacactcccctcccctcaaagatgcttgaattaca 29726430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 6292511 - 6292556
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||    
T  6292511 gagtaaattacactcccctcccctcaaagatgcttgaattacattc 6292556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 10216218 - 10216173
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||    
T  10216218 tttgagtaaattacactcccctcccctcaaagatgcttgaattaca 10216173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 11141141 - 11141096
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||    
T  11141141 gagtaaattacactcccctcccctcaaagatgcttgaattacattc 11141096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 11759379 - 11759427
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  11759379 ttattagagtaaattacactcccctcccctcaaagatgcttgaattaca 11759427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 29459340 - 29459296
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  29459340 ttgagtaaattacactcccctatcctcaaagatgcttgaattaca 29459296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 297 - 349
Target Start/End: Original strand, 37836907 - 37836958
Alignment:
Q  297 attcttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||| |||||||||||||||||| |||| ||||||||||||||||||||||    
T  37836907 attcttttttgagtaaattacactcccctc-cctcaaagatgcttgaattaca 37836958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 302 - 349
Target Start/End: Original strand, 13439381 - 13439428
Alignment:
Q  302 tatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  13439381 tattagagtaaattacactcccctcccctcaaagatgcttgaattaca 13439428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 3075303 - 3075345
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  3075303 gagtaaattacactcccctcccctcaaagatgcttgaattaca 3075345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 8628131 - 8628089
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||| | ||||||||||||||||||||    
T  8628131 gagtaaattacactctcctcccttcaaagatgcttgaattaca 8628089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 22934286 - 22934328
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  22934286 gagtaaattacactcccctcccctcaaagatgcttgaattaca 22934328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 25597770 - 25597812
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  25597770 gagtaaattacactcccctcccctcaaagatgcttgaattaca 25597812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 32905407 - 32905365
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  32905407 gagtaaattacactctcgtcccctcaaagatgcttgaattaca 32905365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 348
Target Start/End: Complemental strand, 37872955 - 37872905
Alignment:
Q  298 ttcttatttgagtaaattacactctcctctcctcaaagatgcttgaattac 348  Q
    ||||| ||||||||||||||| || |||| |||||||||||||||||||||    
T  37872955 ttcttttttgagtaaattacattcccctcccctcaaagatgcttgaattac 37872905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 39998367 - 39998409
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  39998367 gagtaaattacactcccctcccctcaaagatgcttgaattaca 39998409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 3076045 - 3076004
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  3076045 agtaaattacactctcctcctctcaaagatgcttgaattaca 3076004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 34364658 - 34364617
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattac 348  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  34364658 gagtaaattacactcccctcccctcaaagatgcttgaattac 34364617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 14879515 - 14879559
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||    
T  14879515 ttgagtaaattacactcccctcccctcaaagatgtttgaattaca 14879559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 39283656 - 39283748
Alignment:
Q  185 ggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaac 277  Q
    |||||| ||||||||||||||  ||| ||||||||||||||||||||  |||||||   ||||| |||| ||| |  ||||||||| ||||||    
T  39283656 ggtgcacatgataggaagacataataggataaaactatcatatcctgagtcaatccattgtttgatgcaccaacataaaaggataaattaaac 39283748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 349
Target Start/End: Complemental strand, 6099553 - 6099514
Alignment:
Q  310 taaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  6099553 taaattacactcacctcccctcaaagatgcttgaattaca 6099514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 17496258 - 17496305
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattctt 354  Q
    ||||||||||||||| |||| |||||||||| ||||||||||| ||||    
T  17496258 gagtaaattacactcccctcccctcaaagatccttgaattacactctt 17496305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 353
Target Start/End: Original strand, 34678595 - 34678638
Alignment:
Q  310 taaattacactctcctctcctcaaagatgcttgaattacattct 353  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||    
T  34678595 taaattacattctcctcccttcaaagatgcttgaattacattct 34678638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 3075129 - 3075171
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||  |||| ||||||||||||||||||||||    
T  3075129 gagtaaattacacttccctcccctcaaagatgcttgaattaca 3075171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 5872817 - 5872775
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| |||||||| ||||| ||||||||||||||||||||||    
T  5872817 gagtatattacactttcctcccctcaaagatgcttgaattaca 5872775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 349
Target Start/End: Complemental strand, 6293273 - 6293235
Alignment:
Q  311 aaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  6293273 aaattacactcccctcccctcaaagatgcttgaattaca 6293235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 353
Target Start/End: Complemental strand, 11760147 - 11760101
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattct 353  Q
    ||||||||||| ||| |||| | ||||||||||||||||||||||||    
T  11760147 gagtaaattactctcccctcccttcaaagatgcttgaattacattct 11760101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 14880268 - 14880226
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||  ||| ||||||||||||||||||||||    
T  14880268 gagtaaattacactcctctcccctcaaagatgcttgaattaca 14880226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 25954183 - 25954141
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| | ||||||||||||||||||||    
T  25954183 gagtaaattacactcccctcccttcaaagatgcttgaattaca 25954141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 32904299 - 32904257
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| || | ||||||||||||||||||||    
T  32904299 gagtaaattacactctcatcccttcaaagatgcttgaattaca 32904257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 253524 - 253565
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||| |||| |||| ||||||||||||||||||||||    
T  253524 agtaaattagactcccctcccctcaaagatgcttgaattaca 253565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 662334 - 662293
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||| |||| |||| ||||||||||||||||||||||    
T  662334 agtaaattagactcccctcccctcaaagatgcttgaattaca 662293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 848132 - 848091
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||| |||| |||| ||||||||||||||||||||||    
T  848132 agtaaattagactcccctcccctcaaagatgcttgaattaca 848091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 353
Target Start/End: Complemental strand, 44147714 - 44147665
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattacattct 353  Q
    ||||||||||||||||| | ||  | ||||||||||||||||||||||||    
T  44147714 tttgagtaaattacacttttcttccttcaaagatgcttgaattacattct 44147665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 25598543 - 25598495
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| |||||||||||||||  |||  |||||||||||||||||||||    
T  25598543 ttattagagtaaattacactcctctcctctcaaagatgcttgaattaca 25598495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 40791043 - 40791083
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaatta 347  Q
    ||||||||||||||||| || ||||||||||| ||||||||    
T  40791043 gagtaaattacactctcatcccctcaaagatgtttgaatta 40791083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 45413940 - 45413844
Alignment:
Q  181 gtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaac 277  Q
    ||||||||||  ||||||| ||||| |||| |||| |||||||||||| || ||||||| |  |||||||||| |||||||||||||||| ||||||    
T  45413940 gtttggtgcacttgatagggagacaggataggatagaactatcatatcttgattcaatcggttgtttggtgcaccaataggaaaggataaattaaac 45413844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 304 - 352
Target Start/End: Original strand, 48372407 - 48372455
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  48372407 tttgagtaaattacactctcctcccctcaaagatgtttgaattacattc 48372455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 615429 - 615471
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  615429 gagtaaattacactctcctcccctcaaagatgcttgaattaca 615471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 6232416 - 6232458
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  6232416 gagtaaattacactctcctcccctcaaagatgcttgaattaca 6232458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 8193082 - 8193028
Alignment:
Q  295 ttattcttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  8193082 ttattattattagagtaaattacactcccctcccctcaaagatgcttgaattaca 8193028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 29539098 - 29539156
Alignment:
Q  180 tgtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaat 238  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||| |||| ||||    
T  29539098 tgtttggtgcacatgataggaagacagaatatgataaaactatcatatcttgttacaat 29539156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 34666350 - 34666473
Alignment:
Q  181 gtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatca----ataggaaaggataatttaaa 276  Q
    |||||||||| | |||| |||||||  |||||||| |||||||||||| || |||||| ||  |||||||||| ||    |||||||| ||||| |||||    
T  34666350 gtttggtgcacaggataagaagacagaatatgatacaactatcatatcttgcttcaatacgttgtttggtgcagcaatatataggaaatgataacttaaa 34666449  T
Q  277 ctcatttctaatcatatcttattc 300  Q
    |  ||||||||||||||| |||||    
T  34666450 cctatttctaatcatatcctattc 34666473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 37423138 - 37423180
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  37423138 gagtaaattacactctcctcccctcaaagatgcttgaattaca 37423180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 42964617 - 42964515
Alignment:
Q  180 tgtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactc 279  Q
    ||||||||||  | |||| | ||||| ||||||||||||||||| ||||||| |  ||||||   |||| |||| ||||||||||||||||||||||| |    
T  42964617 tgtttggtgcgcaggataagcagacaggatatgataaaactatcctatcctgctgaaatccggtatttgttgcaccaataggaaaggataatttaaaccc 42964518  T
Q  280 att 282  Q
    |||    
T  42964517 att 42964515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 7165388 - 7165433
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||    
T  7165388 tttgagtaaattacactcccctcccctcaaagatgcttgaattaca 7165433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 7797693 - 7797648
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||    
T  7797693 gagtaaattacactcccctcccctcaaagatgcttgaattacattc 7797648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 616217 - 616169
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  616217 ttatttgagtaaattacactccactcccctcaaagatgcttgaattaca 616169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 17730262 - 17730218
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  17730262 ttgagtaaattacactcccctcccctcaaagatgcttgaattaca 17730218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 26705029 - 26705073
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacatt 351  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||    
T  26705029 gagtaaattacactcccctctcctcaaagatacttgaattacatt 26705073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 302 - 349
Target Start/End: Original strand, 721312 - 721359
Alignment:
Q  302 tatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||    
T  721312 tatttgagtaaattacacttccctcccctcaaagatgcttgaattaca 721359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 23721374 - 23721417
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||    
T  23721374 tgagtaaattacactctcctcccctcaaagatgtttgaattaca 23721417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 4950679 - 4950637
Alignment:
Q  303 atttgagtaaattacactctcctctcctcaaagatgcttgaat 345  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  4950679 atttgagtaaattacactcccctcccctcaaagatgcttgaat 4950637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 7166158 - 7166116
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  7166158 gagtaaattacactcccctcccctcaaagatgcttgaattaca 7166116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 7478667 - 7478709
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  7478667 gagtaaattacattctcctctcctcaaagatgtttgaattaca 7478709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 10156058 - 10156016
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  10156058 gagtaaattacactcccctcccctcaaagatgcttgaattaca 10156016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 13392831 - 13392789
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  13392831 gagtaaattacactcccctcccctcaaagatgcttgaattaca 13392789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 13395970 - 13395928
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  13395970 gagtaaattacactcccctcccctcaaagatgcttgaattaca 13395928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 13771713 - 13771755
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  13771713 gagtaaattacactcccctcccctcaaagatgcttgaattaca 13771755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 16960200 - 16960242
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  16960200 gagtaaattacactcccctctcttcaaagatgcttgaattaca 16960242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 32449020 - 32448978
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| ||||||||||||||| |||||||||||    
T  32449020 gagtaaattacactcacctctcctcaaagatacttgaattaca 32448978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 33032895 - 33032853
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  33032895 gagtaaattacactcccctcccctcaaagatgcttgaattaca 33032853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 36422102 - 36422148
Alignment:
Q  303 atttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  36422102 atttgagtaaattacactcccctcccctgaaagatgcttgaattaca 36422148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 37423772 - 37423817
Alignment:
Q  303 atttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||    
T  37423772 atttgagtaaattacactctcctc-cctcaaagatgcttaaattaca 37423817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 47029812 - 47029854
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  47029812 gagtaaattacactcccctcccctcaaagatgcttgaattaca 47029854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 47030562 - 47030520
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  47030562 gagtaaattacactcccctcccctcaaagatgcttgaattaca 47030520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 56310146 - 56310104
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  56310146 gagtaaattacactcatctctcctcaaagatgcttgaattaca 56310104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 347
Target Start/End: Complemental strand, 755611 - 755566
Alignment:
Q  302 tatttgagtaaattacactctcctctcctcaaagatgcttgaatta 347  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||    
T  755611 tatttgagtaaattacacttccctcccctcaaagatgcttgaatta 755566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 6233869 - 6233824
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  6233869 tttgaataaattacactctcctcccctcaaagatgtttgaattaca 6233824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 13482175 - 13482220
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||    
T  13482175 tttgagtaaattacacttccctcccctcaaagatgcttgaattaca 13482220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 18362780 - 18362735
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||    
T  18362780 tttgagtaaattacacttccctcccctcaaagatgcttgaattaca 18362735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 19313341 - 19313382
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  19313341 agtaaattacactcccctcccctcaaagatgcttgaattaca 19313382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 20545101 - 20545056
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||||    
T  20545101 tttgagtaaattacactcccctcccctcagagatgcttgaattaca 20545056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 35667645 - 35667604
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  35667645 agtaaattacactcccctcccctcaaagatgcttgaattaca 35667604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 36600146 - 36600191
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||    
T  36600146 tttgagtaaattacacttccctcccctcaaagatgcttgaattaca 36600191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 43481411 - 43481366
Alignment:
Q  244 gtttggtgcatcaataggaaaggataatttaaactcatttctaatc 289  Q
    |||||||||| ||||| |||||||||| ||||||||||||||||||    
T  43481411 gtttggtgcaccaataagaaaggataaattaaactcatttctaatc 43481366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 44665265 - 44665224
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattac 348  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  44665265 gagtaaattacactctcctcccctcaaagttgcttgaattac 44665224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 46095398 - 46095443
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| || |||| ||||||||||||||||||||||    
T  46095398 tttgagtaaattacattcccctcccctcaaagatgcttgaattaca 46095443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 6711225 - 6711269
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| | || ||||||||||||||||||||||    
T  6711225 ttgagtaaattacactcccatcccctcaaagatgcttgaattaca 6711269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 26809132 - 26809084
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| |||||||||||||||||||  ||||||||||| ||||||||||    
T  26809132 ttattagagtaaattacactctccttccctcaaagatgtttgaattaca 26809084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 28464164 - 28464208
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| |||| ||| ||||||||||||||||||    
T  28464164 ttgagtaaattacactcccctccccttaaagatgcttgaattaca 28464208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 35667365 - 35667321
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| |||| | ||||||||||||||||||||    
T  35667365 ttgagtaaattacactcccctcccatcaaagatgcttgaattaca 35667321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 36897453 - 36897497
Alignment:
Q  305 ttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||    
T  36897453 ttgagtaaattacactcccctcccctcaaagatgcttaaattaca 36897497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 349
Target Start/End: Original strand, 6232309 - 6232356
Alignment:
Q  302 tatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||| ||||||||||||||| |||| | ||||||||||||||||||||    
T  6232309 tattagagtaaattacactcccctcccttcaaagatgcttgaattaca 6232356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 35665944 - 35665987
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaatta 347  Q
    |||||||||||||||| | |||| ||||||||||||||||||||    
T  35665944 tttgagtaaattacacacccctcccctcaaagatgcttgaatta 35665987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 36898180 - 36898137
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||| |||| |||||||||| |||||||||||    
T  36898180 tgagtaaattacactcccctcccctcaaagatacttgaattaca 36898137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 44125989 - 44126068
Alignment:
Q  221 atcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactcatttctaatcatatcttattc 300  Q
    ||||||||||| | ||||  ||  ||||||||| |||||||||| ||||| ||||||| |||||||||| |||| |||||    
T  44125989 atcatatcctgatccaatatgctatttggtgcagcaataggaaatgataaattaaacttatttctaatcctatcctattc 44126068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 349
Target Start/End: Original strand, 50824618 - 50824665
Alignment:
Q  302 tatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||| |||||||||||||||  || |||||||||||||||||||||||    
T  50824618 tattagagtaaattacactcctctttcctcaaagatgcttgaattaca 50824665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 53306427 - 53306384
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||||  |||||||||||| |||||||||    
T  53306427 tgagtaaattacactctccttccctcaaagatgcatgaattaca 53306384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 722059 - 722017
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| |||||||||| |||||||||||    
T  722059 gagtaaattacactcccctcccctcaaagatacttgaattaca 722017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 796378 - 796420
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| | ||||||||||||||||||||    
T  796378 gagtaaattacactcccctcccttcaaagatgcttgaattaca 796420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 2183303 - 2183353
Alignment:
Q  244 gtttggtgcatcaataggaaaggataatttaaactcatttctaatcatatc 294  Q
    |||||||||| |||||| ||||||||| ||||||||||||| |||| ||||    
T  2183303 gtttggtgcaccaatagaaaaggataaattaaactcatttccaatcctatc 2183353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 6233183 - 6233141
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| |||||||||| |||||||||||    
T  6233183 gagtaaattacactcccctcccctcaaagatacttgaattaca 6233141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 7797692 - 7797742
Alignment:
Q  299 tcttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||| ||||||||||||||||||  ||| | ||||||||||||||||||||    
T  7797692 tcttttttgagtaaattacactcatctcccttcaaagatgcttgaattaca 7797742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 10155498 - 10155540
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||    
T  10155498 gagtaaattacactcccctcccctcaaagatgtttgaattaca 10155540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 12250669 - 12250711
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| | || ||||||||||||||||||||||    
T  12250669 gagtaaattacactcccttcccctcaaagatgcttgaattaca 12250711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 16192395 - 16192353
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| ||||| || ||||||||||||||||||    
T  16192395 gagtaaattacactcccctctactgaaagatgcttgaattaca 16192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 19314093 - 19314051
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||  |||| ||||||||||||||||||||||    
T  19314093 gagtaaattacacttccctcccctcaaagatgcttgaattaca 19314051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 23265864 - 23265822
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||  |||| ||||||||||||||||||||||    
T  23265864 gagtaaattacacttccctcccctcaaagatgcttgaattaca 23265822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 23269163 - 23269205
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| | ||||||||||||||||||||    
T  23269163 gagtaaattacactcccctcccttcaaagatgcttgaattaca 23269205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 23308789 - 23308835
Alignment:
Q  303 atttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||  ||  ||||||||||||||||||||||    
T  23308789 atttgagtaaattacactccactgccctcaaagatgcttgaattaca 23308835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 23722131 - 23722089
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||  |||| ||||||||||||||||||||||    
T  23722131 gagtaaattacacttccctcccctcaaagatgcttgaattaca 23722089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 24155113 - 24155171
Alignment:
Q  181 gtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatc 239  Q
    |||||||||| | |||| |||||||  ||||||||| |||||||| |||||||||||||    
T  24155113 gtttggtgcacaggataagaagacagaatatgataatactatcatgtcctgtttcaatc 24155171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 33032155 - 33032197
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||  |||| ||||||||||||||||||||||    
T  33032155 gagtaaattacacttccctcccctcaaagatgcttgaattaca 33032197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 35854310 - 35854268
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||||| ||||||||| ||||||||||    
T  35854310 gagtaaattacactcccctctcttcaaagatgtttgaattaca 35854268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 41919984 - 41919938
Alignment:
Q  311 aaattacactctcctctcctcaaagatgcttgaattacattcttctc 357  Q
    |||||||||||  ||| |||||||||||||||||||||| |||||||    
T  41919984 aaattacactcctctcccctcaaagatgcttgaattacactcttctc 41919938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 46096199 - 46096157
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| | ||||||||||||||||||||    
T  46096199 gagtaaattacactcccctcccttcaaagatgcttgaattaca 46096157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 46138700 - 46138658
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| | ||||||||||||||||||||    
T  46138700 gagtaaattacactcccctcccttcaaagatgcttgaattaca 46138658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 54145011 - 54145053
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||  ||| ||||||||||||||||||||||    
T  54145011 gagtaaattacactcctctcccctcaaagatgcttgaattaca 54145053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 55068838 - 55068880
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| ||||  |||||||||||||||||||||    
T  55068838 gagtaaattacactcccctcctctcaaagatgcttgaattaca 55068880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 347
Target Start/End: Complemental strand, 16960959 - 16960914
Alignment:
Q  302 tatttgagtaaattacactctcctctcctcaaagatgcttgaatta 347  Q
    |||||||||||||||||| | |||| |||||||||| |||||||||    
T  16960959 tatttgagtaaattacacccccctcccctcaaagattcttgaatta 16960914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 17729507 - 17729548
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||    
T  17729507 agtaaattacactctcctcccctcaaatatgtttgaattaca 17729548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 294
Target Start/End: Complemental strand, 19181583 - 19181470
Alignment:
Q  181 gtttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactca 280  Q
    |||||||||| |||||||  ||||| |||||||||||| |||| ||||||| | |||||    |||||||||| ||| | || | ||||| ||||||  |    
T  19181583 gtttggtgcacatgatagagagacatgatatgataaaattatcctatcctgatccaatctattgtttggtgcaccaacatgatatgataaattaaaccta 19181484  T
Q  281 tttctaatcatatc 294  Q
    ||||||||| ||||    
T  19181483 tttctaatcctatc 19181470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 29979052 - 29979096
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattacattc 352  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||    
T  29979052 gagtaaattacaccctcatc-cctcaaagatgcttgaattacattc 29979096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 35667460 - 35667419
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||| | || ||||||||||||||||||||||    
T  35667460 agtaaattacactcccttcccctcaaagatgcttgaattaca 35667419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 37735554 - 37735513
Alignment:
Q  312 aattacactctcctctcctcaaagatgcttgaattacattct 353  Q
    ||||||| ||||||||| |||||||||||||||||| |||||    
T  37735554 aattacattctcctctcttcaaagatgcttgaattatattct 37735513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 25970853 - 25970929
Alignment:
Q  213 ataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataatttaaactcatttctaatc 289  Q
    |||||||||||||||  || ||||||  |  |||||||||| |||||| | ||||||| |||| |||||||||||||    
T  25970853 ataaaactatcatattttgattcaatatgttgtttggtgcaccaatagaagaggataacttaacctcatttctaatc 25970929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 270
Target Start/End: Complemental strand, 55945820 - 55945733
Alignment:
Q  182 tttggtgcatatgataggaagacaagatatgataaaactatcatatcctgtttcaatccgccgtttggtgcatcaataggaaaggataa 270  Q
    ||||||||| |||||| || |||| |||||||| ||| |||| || |||   ||||||||  |||||||||| ||||||||||||||||    
T  55945820 tttggtgcacatgataaga-gacatgatatgattaaaatatcctacccttcctcaatccgttgtttggtgcaccaataggaaaggataa 55945733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 19738 - 19684
Alignment:
Q  295 ttattcttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  19738 ttattattattagagtaaattacactcccctcccctcaaagatgcttgaattaca 19684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 19061 - 19103
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  19061 gagtaaattacactcccctcccctcaaagatgcttgaattaca 19103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 347
Target Start/End: Original strand, 9480 - 9521
Alignment:
Q  306 tgagtaaattacactctcctctcctcaaagatgcttgaatta 347  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  9480 tgagtaaattacactctcctcccctcaaagatgcttgaatta 9521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 10190 - 10148
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| | || ||||||||||||||||||||||    
T  10190 gagtaaattacactcccttcccctcaaagatgcttgaattaca 10148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 27088 - 27040
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  27088 ttattagagtaaattacactcccctcccctcaaagatgcttgaattaca 27040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 26344 - 26390
Alignment:
Q  303 atttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||||||||| ||||||||||| || |||||||    
T  26344 atttgagtaaattacactctcctcccctcaaagatggttaaattaca 26390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 11715 - 11667
Alignment:
Q  301 ttatttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  11715 ttattagagtaaattacactctcctcccctcaaagatgcttcaattaca 11667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 3403 - 3445
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  3403 gagtaaattacactcccctcccctcaaagatgcttgaattaca 3445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 15408 - 15366
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  15408 gagtaaattacactcccctcccctcaaagatgcttgaattaca 15366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 32703 - 32748
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||    
T  32703 tttgagtaaattacactcccctcccttcaaagatgcttgaattaca 32748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 357
Target Start/End: Original strand, 12180 - 12235
Alignment:
Q  302 tatttgagtaaattacactctcctctcctcaaagatgcttgaattacattcttctc 357  Q
    |||| ||||||||||||||| |||  | ||||||||||||||||||||||| ||||    
T  12180 tattagagtaaattacactccccttccttcaaagatgcttgaattacattcctctc 12235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 12939 - 12897
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||    
T  12939 gagtaaattacactcccctcccctcaaagatgtttgaattaca 12897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2113 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 721 - 763
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| | || ||||||||||||||||||||||    
T  721 gagtaaattacactcccatcccctcaaagatgcttgaattaca 763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 13451 - 13493
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||| |||| |||||||||||| |||||||||    
T  13451 gagtaaattacactcccctcccctcaaagatgcatgaattaca 13493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 10588 - 10630
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||    
T  10588 gagtgaattacactctcctcccctcaaagatgtttgaattaca 10630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 11340 - 11295
Alignment:
Q  304 tttgagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||||||| |||| ||| |||||| |||||||||||    
T  11340 tttgagtaaattacactcccctccccttaaagatacttgaattaca 11295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 59255 - 59297
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    ||||||||||||||||||||  || ||||||||||||||||||    
T  59255 gagtaaattacactctcctcctctaaaagatgcttgaattaca 59297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 34394 - 34353
Alignment:
Q  307 gagtaaattacactctcctctcctcaaagatgcttgaattac 348  Q
    ||||||||||| ||| |||| |||||||||||||||||||||    
T  34394 gagtaaattacgctcccctcccctcaaagatgcttgaattac 34353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 18821 - 18780
Alignment:
Q  308 agtaaattacactctcctctcctcaaagatgcttgaattaca 349  Q
    |||||||||||||| |||| ||||||| ||||||||||||||    
T  18821 agtaaattacactcccctcccctcaaaaatgcttgaattaca 18780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University