View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17474_high_37 (Length: 254)
Name: NF17474_high_37
Description: NF17474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17474_high_37 |
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Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 13 - 233
Target Start/End: Complemental strand, 52180010 - 52179790
Alignment:
| Q |
13 |
cgaagaatattgttagggagatcaatgacatggagagattatgaattgctgggaatggacctaaaggtacagggcgcagtctccgacatagtttaaggat |
112 |
Q |
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| T |
52180010 |
cgaaaaatattgttagggagattaatgacatggagagactatgaattgctggtaatggacctaaaggtacagggcgcagtctccgacatagtttaaggat |
52179911 |
T |
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| Q |
113 |
gacgtggatagttaccgtgatggagatgtaaaagaatatggcggagatgagaaaccaccatgtggctccccatgatagggcaggactccaccggaatgaa |
212 |
Q |
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| T |
52179910 |
gacgtggatagttaccgtgatggagatgtaaaagaatatggcggagatgagaaaccaccatgtggctccccatgatagggcaggactccaccggaatgaa |
52179811 |
T |
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| Q |
213 |
acaattgatgggtgatctagt |
233 |
Q |
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| T |
52179810 |
acaattgatgggtgatctagt |
52179790 |
T |
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