View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17474_low_14 (Length: 405)
Name: NF17474_low_14
Description: NF17474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17474_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 1 - 388
Target Start/End: Complemental strand, 34409673 - 34409286
Alignment:
| Q |
1 |
tttttagagtggattgtagtccctggttggtctgcaattctaactacgtcgttattctaggtaaaattccttctatatatcatgctagcttcttcaattt |
100 |
Q |
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||||||| |||||||||||| | || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| |
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| T |
34409673 |
tttttagtgtggattgtagttcttgtttggtctgcaattctaactacgtcgttattttaggtaaaattccttctatatatcatgcttgctccttcaattt |
34409574 |
T |
|
| Q |
101 |
ttgtggcaaacgcttattagaagatgttaatatttaagccctcacacggggacaatgcttcactcgctcatttgttttcttctccccttctcattttcct |
200 |
Q |
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|||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
34409573 |
ttgtggaaaacgcttattagaagatgttaatattaaagccctcacccggggacaatgcttctctcgctcatttgttttcttctccccttctcattttcct |
34409474 |
T |
|
| Q |
201 |
cgtttaatgtcatacttaccgaaaaatgtaaatacatttgatgcagtcaaaactttctgtagtcactgcatctccaccgttgaatgaacattggatggtt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |
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| T |
34409473 |
cgtttaatgtcatacttaccgaaaaatgtaaatacatttgatgcagtcaaaactttctgtagccactgcatctccaccgttgaatgaacattgaatggtt |
34409374 |
T |
|
| Q |
301 |
cgttccaagatttaatttagtgaagttggaatatcaaccatccgattttcatccaagtatgaaatgcaatgaccacatacatctttta |
388 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
34409373 |
cgttccaagttttaatttagtgaagttggaatatcaaccatccgattttcatccaagtatgaaatgcaatgaccgcatacatctttta |
34409286 |
T |
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