View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17474_low_17 (Length: 371)
Name: NF17474_low_17
Description: NF17474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17474_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 113 - 355
Target Start/End: Original strand, 29202705 - 29202947
Alignment:
| Q |
113 |
atggagactttatgaattatttattttaagaattgtgaaaccaaatattcattnnnnnnncaatgataaattttagtgacagctgtaactataggtagaa |
212 |
Q |
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| T |
29202705 |
atggagactttatgaattatttattttaagaattgtgaaaccaaatattcattaaaaaaacaatgataaattttagtgagagttgtaactataggtagaa |
29202804 |
T |
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| Q |
213 |
ttcattgtttacaaggggtcttttaggaattaccttcagtttcgtccttgggtaaaggtctaaaatagtaaggaagtttgagatttacctacggatttgg |
312 |
Q |
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| T |
29202805 |
ttcattgtttacagggggtcttttaggaattaccttcagtttcgtccctaggtaaaggtctaaaatagtaaggaagcttgagatttacctacggatttgg |
29202904 |
T |
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| Q |
313 |
gccttatagtgacagtttttatctgtcgctagaagtcaaattt |
355 |
Q |
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| T |
29202905 |
gccttatagtgacagtttttatctgtcgctagaagtcaaattt |
29202947 |
T |
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