View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17474_low_31 (Length: 293)
Name: NF17474_low_31
Description: NF17474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17474_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 28417201 - 28416958
Alignment:
| Q |
1 |
ctagattgaggcattagccaataaagattcattctttttacagatccataacacgcaaattcatgaacaattaatatgctaggaatcaagcgagtaatat |
100 |
Q |
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| T |
28417201 |
ctagatggaggcattagccaataaagattcattctttttacagatccataacacgcaaattcatgaacaattaatatgctaggaatcaagcgagtaatat |
28417102 |
T |
|
| Q |
101 |
cgggtcattttggatgaaattatcatatgaaataacattacaaatgccataaaaggtatagcatgacgtagactacttttctatagtttctacannnnnn |
200 |
Q |
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| T |
28417101 |
cgggtcattttggatgaaattatcatatgaaataacattacaaatgccagaaaaggtatagcatgacgtagactacttttctatagtttctacatttttt |
28417002 |
T |
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| Q |
201 |
nacnnnnnnncaaaatgaagtaacacaagcatattcttgaacca |
244 |
Q |
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| T |
28417001 |
tacaagaaaacaaaatgaagtaacacaagcatattcttgaacca |
28416958 |
T |
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