View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1747_low_1 (Length: 545)
Name: NF1747_low_1
Description: NF1747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1747_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 504; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 504; E-Value: 0
Query Start/End: Original strand, 10 - 529
Target Start/End: Complemental strand, 33829100 - 33828581
Alignment:
| Q |
10 |
aagaatatatgtcgcacaagagtttaatataataagtttatatcaaagtggctcgatatgtacaataagttttactataatactattgtatagtttgaat |
109 |
Q |
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| T |
33829100 |
aagaatatatgtcgcacaagagtttaatataataagtttatatcaaagtggctcgatatgtacaataagttttactataatactattgtataatttgaat |
33829001 |
T |
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| Q |
110 |
aggttctgtttgctacatatctaagctttttaaaactttagtctcaaccgacggcattaaagtacaaaattacggtattagatagaatacttaatttggt |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33829000 |
aggttctgtttgctacatatctaagctttttaaaactttagtctcaaccgacggcattaaagtacaaaattacggtattagatagaatacttaatttggt |
33828901 |
T |
|
| Q |
210 |
ctgaatttccattagcacgtgatcatctattttaatttggaagaaagaagctaagtgcggccattatataaaaatgtccaagaaaacttaattttatatg |
309 |
Q |
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| T |
33828900 |
ctgaatttccattagcacgtgatcatctattttaatttggaagaaagaagctaagtgcggccattatataaaaatgtccaagaaaacttaattttatatg |
33828801 |
T |
|
| Q |
310 |
tattttagtttacatttgcacaaaattatcgcaatgtataccaaacatatctagtttcaacgtccctttaaaccaaaccaatgcaagcatcaagttacct |
409 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
33828800 |
tattttagtttacatttgcacaaaattatcgcaatgtataccaaacatatctagtttcaacgtccctttgaaccaaaccaatgcaagcatcaagttacct |
33828701 |
T |
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| Q |
410 |
tttccaaaatgtaggttcgactttcaattcaaattgttcatatattttatgattataaaaagttagatgagtttgattctcaaggctcgttagggtcata |
509 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |
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| T |
33828700 |
tttccaaaatgtaggttcgactttcaattcaaattgttcatatattttatgattataaaaagttagatgagtttgattctcaaggctcctcagggtcata |
33828601 |
T |
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| Q |
510 |
ccaaacctaaaagctcaagg |
529 |
Q |
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|||||||||||||||||||| |
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| T |
33828600 |
ccaaacctaaaagctcaagg |
33828581 |
T |
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