View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1747_low_17 (Length: 251)

Name: NF1747_low_17
Description: NF1747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1747_low_17
NF1747_low_17
[»] chr7 (6 HSPs)
chr7 (19-237)||(5284146-5284364)
chr7 (19-237)||(5289763-5289981)
chr7 (19-237)||(5302334-5302552)
chr7 (19-237)||(5314949-5315167)
chr7 (19-230)||(5310242-5310453)
chr7 (19-190)||(46707054-46707225)
[»] chr5 (7 HSPs)
chr5 (19-199)||(1482069-1482249)
chr5 (19-196)||(1477878-1478055)
chr5 (19-191)||(1492052-1492224)
chr5 (19-190)||(1504862-1505033)
chr5 (19-189)||(1509009-1509180)
chr5 (22-98)||(1499217-1499293)
chr5 (19-213)||(1486532-1486726)
[»] chr1 (3 HSPs)
chr1 (19-190)||(44128459-44128630)
chr1 (19-190)||(44132664-44132835)
chr1 (19-190)||(44141086-44141257)
[»] chr3 (2 HSPs)
chr3 (37-189)||(37859448-37859600)
chr3 (33-189)||(37863470-37863626)
[»] chr2 (1 HSPs)
chr2 (19-208)||(24163856-24164045)
[»] chr8 (1 HSPs)
chr8 (58-107)||(35250779-35250828)


Alignment Details
Target: chr7 (Bit Score: 183; Significance: 4e-99; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 19 - 237
Target Start/End: Complemental strand, 5284364 - 5284146
Alignment:
Q  19 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacac 118  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5284364 tttatagccttcactgcagcctcctttcctagtctaggtacctctaccaccaccatgtcttgccttgcatccaatgaaggggccatgtattcacaaacac 5284265  T
Q  119 ttggannnnnnnncaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaagtagttataataaaatgacattagcacat 218  Q
    | |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5284264 taggattttttttcaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaagtagttataataaaatgacattagcacat 5284165  T
Q  219 cagtttttgggtgatatat 237  Q
    |||||||||||||||||||    
T  5284164 cagtttttgggtgatatat 5284146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 19 - 237
Target Start/End: Original strand, 5289763 - 5289981
Alignment:
Q  19 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacac 118  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  5289763 tttatagccttcactgcagcctcctttcctagtctaggtacctctaccaccaccatgtcttgcctagcatccaatgaaggggccatgtattcacaaacac 5289862  T
Q  119 ttggannnnnnnncaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaagtagttataataaaatgacattagcacat 218  Q
    |||||        |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||    
T  5289863 ttggattttctttcaaaatttcttctgttagatacatgtatctcctcttgatcatggatttatcacctgaagtagttataatggaatgacattagcacat 5289962  T
Q  219 cagtttttgggtgatatat 237  Q
    |||||||||||| ||||||    
T  5289963 cagtttttgggtaatatat 5289981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 19 - 237
Target Start/End: Complemental strand, 5302552 - 5302334
Alignment:
Q  19 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacac 118  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  5302552 tttatagccttcactgcagcctcctttcctagtctaggtacctctaccaccaccatgtcttgcctagcatccaatgaaggggccatgtattcacaaacac 5302453  T
Q  119 ttggannnnnnnncaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaagtagttataataaaatgacattagcacat 218  Q
    | |||        |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||    
T  5302452 taggattttctttcaaaatttcttctgttagatacatgtatctcctcttgatcatggatttatcacctgaagtagttataatggaatgacattagcacat 5302353  T
Q  219 cagtttttgggtgatatat 237  Q
    |||||||||||| ||||||    
T  5302352 cagtttttgggtaatatat 5302334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 19 - 237
Target Start/End: Complemental strand, 5315167 - 5314949
Alignment:
Q  19 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacac 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  5315167 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgcctagcatccaatgaaggggccatgtattcacaaacac 5315068  T
Q  119 ttggannnnnnnncaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaagtagttataataaaatgacattagcacat 218  Q
    | |||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  5315067 taggattttctttcaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaagtagttataatgaaatggcattagcacat 5314968  T
Q  219 cagtttttgggtgatatat 237  Q
    || |||||| || ||||||    
T  5314967 caatttttgtgtaatatat 5314949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 5310453 - 5310242
Alignment:
Q  19 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacac 118  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  5310453 tttatagccttcactgcagcctcctttcctagtctaggtacctctaccaccaccatgtcttgccttgcatccaatgaaggtgccatgtattcacaaacac 5310354  T
Q  119 ttggannnnnnnncaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaagtagttataataaaatgacattagcacat 218  Q
    | |||        |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  5310353 taggattttctttcaaaatctcctctgttagatacatgtatctcctcttgatcatagatttatcacctgaagtggttataatgaaatgacattagcacat 5310254  T
Q  219 cagtttttgggt 230  Q
     | |||||||||    
T  5310253 taatttttgggt 5310242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 46707054 - 46707225
Alignment:
Q  19 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacac 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||    
T  46707054 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgcctggcatccaatgaaggtgccatatattcacaaacac 46707153  T
Q  119 ttggannnnnnnncaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaag 190  Q
    | |||        |||||| || | |||||| ||||||||||||||||||||||||||||||||||||||||    
T  46707154 tgggattctctttcaaaatctcctatgttaggtacatgtatctcctcttgatcatagatttatcacctgaag 46707225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 3e-57; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 19 - 199
Target Start/End: Complemental strand, 1482249 - 1482069
Alignment:
Q  19 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacac 118  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| || |||||||||||||| ||||||||||| || ||||    
T  1482249 tttatagccttcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtcttgcctagcatccaatgaaggtgccatgtattcgcatacac 1482150  T
Q  119 ttggannnnnnnncaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaagtagttataa 199  Q
    | |||        |||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1482149 taggattttctttcaaaatctcttcagtaagatacatgtatctcctcttgatcatagatttatcacctgaagtagttataa 1482069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 196
Target Start/End: Complemental strand, 1478055 - 1477878
Alignment:
Q  19 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacac 118  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| || || ||||||||||| || |||||||||||||| ||||    
T  1478055 tttatagctttcactgcagcctcctttcctagtctaggtacttctaccaccaccatgtcctgcctagcatccaatgacggtgccatgtattcacatacac 1477956  T
Q  119 ttggannnnnnnncaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaagtagtta 196  Q
    |||||        |||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1477955 ttggattttctttcaaaatttcttcggtaagatacatgtatctcctcttgatcatggatttatcacctgaagtagtta 1477878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 1492224 - 1492052
Alignment:
Q  19 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacac 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||     
T  1492224 tttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaaggtgccatgtattcacaaacat 1492125  T
Q  119 ttggannnnnnnncaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaagt 191  Q
    | |||         ||||| || |||||||||||||||||||| || |||||||| ||||| |||||||||||    
T  1492124 taggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaagt 1492052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 1505033 - 1504862
Alignment:
Q  19 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacac 118  Q
    |||||||| || || ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||    
T  1505033 tttatagcttttacggcagcctcctttcctagtctaggtacctctaccaccaccatgtcttgcctagcatccaatgaaggtgccatgtattcacaaacac 1504934  T
Q  119 ttggannnnnnnncaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaag 190  Q
    | |||         ||||| || |||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  1504933 tgggattctcttttaaaatctcctctgttaggtacatgtatcttctcttaatcatagatttatcacctgaag 1504862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 1509180 - 1509009
Alignment:
Q  19 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacac 118  Q
    |||||||||||||||||| |||| || ||||| |||||||||| ||| |||||||||||||| || ||||||||||| || ||| | ||  ||||||||     
T  1509180 tttatagccttcactgcaacctcttttcctagcctaggtacctttacaaccaccatgtcttgcctagcatccaatgatggtgccgtataagcacaaacat 1509081  T
Q  119 ttggannnnnnnncaaaatttcttctgttagatacatgtatctcctctt-gatcatagatttatcacctgaa 189  Q
    | |||        |||||| |||||||| | |||||||||||||||||| |||||| |||||||||||||||    
T  1509080 tgggattctctttcaaaatctcttctgtaatatacatgtatctcctcttagatcatcgatttatcacctgaa 1509009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 1499293 - 1499217
Alignment:
Q  22 atagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaagg 98  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| || |||||||| |||||    
T  1499293 atagccttcactgcagcctccttccctagtctaggtatctctaccgccatcatgtcttgcctagcatccaaagaagg 1499217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 1486726 - 1486532
Alignment:
Q  19 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacac 118  Q
    |||||||| |||||||||||||| || ||||| ||||| || |||  ||||||||||||||| || |||||||| ||||| | ||| ||    |||| |     
T  1486726 tttatagctttcactgcagcctcatttcctagcctaggcacgtctcgcaccaccatgtcttgcctagcatccaaagaaggtgtcatataagtgcaaaaat 1486627  T
Q  119 ttggannnnnnnncaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaagtagttataataaaatgacattag 213  Q
    | |||        ||||||  |||||||| | ||||||||||| ||||||||||| ||||| |||||| ||||| ||||||  || |||||||||    
T  1486626 taggattctctttcaaaatagcttctgtttggtacatgtatcttctcttgatcattgatttttcacctaaagtaattataaataattgacattag 1486532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 44128630 - 44128459
Alignment:
Q  19 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacac 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||    
T  44128630 tttatggccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgcctagcatccaatgaaggtgccatgtattcacaaacac 44128531  T
Q  119 ttggannnnnnnncaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaag 190  Q
    | |||        |||||| || |||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  44128530 taggattctctttcaaaatctcctctgttaggtacatatatctcctcttgatcatagatttatcacctgaag 44128459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 44132835 - 44132664
Alignment:
Q  19 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacac 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||    
T  44132835 tttatggccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgcctagcatccaatgaaggtgccatgtattcacaaacac 44132736  T
Q  119 ttggannnnnnnncaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaag 190  Q
    | |||        |||||| || |||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  44132735 taggattctctttcaaaatctcctctgttaggtacatatatctcctcttgatcatagatttatcacctgaag 44132664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 44141257 - 44141086
Alignment:
Q  19 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacac 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||    
T  44141257 tttatggccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgcctagcatccaatgaaggtgccatgtattcacaaacac 44141158  T
Q  119 ttggannnnnnnncaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaag 190  Q
    | |||        |||||| || |||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  44141157 taggattctctttcaaaatctcctctgttaggtacatatatctcctcttgatcatagatttatcacctgaag 44141086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 189
Target Start/End: Original strand, 37859448 - 37859600
Alignment:
Q  37 gcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacacttggannnnnnnncaaaa 136  Q
    ||||| || |||||||| |||||||| || |||||||||||||||||||||||||||||||| |||||||| || || |||||||||        ||  |    
T  37859448 gcctcttttcctagtcttggtacctccacaaccaccatgtcttgtcttgcatccaatgaaggtgccatgtactcgcatacacttggattctctttcagga 37859547  T
Q  137 tttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaa 189  Q
    | |||||||| |  |||||||||||| |||||||||| || ||||||||||||    
T  37859548 tctcttctgtcaagtacatgtatctcttcttgatcattgacttatcacctgaa 37859600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 189
Target Start/End: Original strand, 37863470 - 37863626
Alignment:
Q  33 tgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacacttggannnnnnnnc 132  Q
    ||||||||| || |||||  | ||||| || || |||||||| || |||||||||||||| ||||| ||||| || ||||| | ||| |||        |    
T  37863470 tgcagcctcttttcctagctttggtacttccacaaccaccatatcctgtcttgcatccaacgaaggtgccatatactcacataaactaggattctccttc 37863569  T
Q  133 aaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaa 189  Q
    ||||| ||||| || | || |||||||||| |||| |||||||||||||||||||||    
T  37863570 aaaatctcttcagtcaaatgcatgtatctcttcttaatcatagatttatcacctgaa 37863626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 24163856 - 24164045
Alignment:
Q  19 tttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgtattcacaaacac 118  Q
    |||||||||||||| || |||||||| |||||||| ||| ||||||| |||||||||||||| || | |||||| ||||| ||||| ||    || |       
T  24163856 tttatagccttcacggctgcctcctttcctagtcttggtgcctctactaccaccatgtcttgcctagtatccaaagaaggtgccatataagtgcacaagt 24163955  T
Q  119 ttggannnnnnnncaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaagtagttataataaaatgac 208  Q
    | |||        |||||| ||||| ||||| ||||||||||||||||||||||||| |||||||||| || |||||||||  |||||||    
T  24163956 taggattctctttcaaaatctcttcggttaggtacatgtatctcctcttgatcatagttttatcacctaaaatagttataaagaaatgac 24164045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 35250828 - 35250779
Alignment:
Q  58 acctctaccaccaccatgtcttgtcttgcatccaatgaaggggccatgta 107  Q
    |||||||| |||||||| |||||||||||||||||||| || ||||||||    
T  35250828 acctctactaccaccatatcttgtcttgcatccaatgatggtgccatgta 35250779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University