View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1747_low_21 (Length: 218)
Name: NF1747_low_21
Description: NF1747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1747_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 6 - 215
Target Start/End: Original strand, 48491766 - 48491975
Alignment:
| Q |
6 |
gattcaacaagtagttcattgaactcgatacaacgtacagttaatctaataaacaagtcgaactgatggagcagttagtgggcttgaattgattcaaact |
105 |
Q |
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| T |
48491766 |
gattcaacaagtagttcattgaactcgatacaacgtacaattaatctaataaacaagtcgaactgatggagcagttagtgggcttgaattgattcaaact |
48491865 |
T |
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| Q |
106 |
tcagtagaaaaataatgttcatgtcaaacttgagtccgagcaggacaaattcttatcaaataaagtcgagctgaagcaagttttgactcaaatggactaa |
205 |
Q |
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| T |
48491866 |
tgagtagaaaaataatgttcatgtcaaacttgagtccgagcaggacaaattcttatcaaataaagtcgagctgaagcaagttttgactcaaatggactaa |
48491965 |
T |
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| Q |
206 |
tttcaatgat |
215 |
Q |
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|||| ||||| |
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| T |
48491966 |
tttccatgat |
48491975 |
T |
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