View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17481_high_4 (Length: 327)

Name: NF17481_high_4
Description: NF17481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17481_high_4
NF17481_high_4
[»] chr5 (18 HSPs)
chr5 (1-311)||(38816628-38816931)
chr5 (135-210)||(19820428-19820503)
chr5 (161-290)||(22423764-22423895)
chr5 (135-202)||(22013364-22013431)
chr5 (135-209)||(42469171-42469245)
chr5 (243-292)||(8420075-8420124)
chr5 (160-209)||(15410483-15410532)
chr5 (157-209)||(6326332-6326384)
chr5 (238-290)||(9929668-9929720)
chr5 (174-258)||(3966492-3966577)
chr5 (167-210)||(34879332-34879375)
chr5 (150-208)||(15382442-15382500)
chr5 (262-292)||(24906250-24906280)
chr5 (174-207)||(6035472-6035505)
chr5 (174-210)||(17123037-17123073)
chr5 (157-201)||(21522722-21522766)
chr5 (157-201)||(21533288-21533332)
chr5 (174-210)||(27144452-27144488)
[»] chr7 (24 HSPs)
chr7 (135-209)||(27944991-27945065)
chr7 (157-210)||(11722132-11722185)
chr7 (135-209)||(24105629-24105702)
chr7 (178-260)||(29787354-29787435)
chr7 (148-258)||(24339605-24339716)
chr7 (160-241)||(19206025-19206107)
chr7 (174-258)||(32308109-32308194)
chr7 (180-290)||(11700798-11700909)
chr7 (150-210)||(1433419-1433479)
chr7 (130-290)||(7328639-7328805)
chr7 (135-206)||(2034392-2034462)
chr7 (159-210)||(2425767-2425818)
chr7 (135-210)||(43027503-43027578)
chr7 (150-209)||(43249958-43250017)
chr7 (168-210)||(8046061-8046103)
chr7 (174-241)||(22484014-22484082)
chr7 (168-210)||(23191879-23191921)
chr7 (160-210)||(26733279-26733329)
chr7 (179-253)||(30731031-30731104)
chr7 (177-250)||(11072290-11072362)
chr7 (262-291)||(17852091-17852120)
chr7 (159-208)||(49107795-49107844)
chr7 (262-290)||(15680900-15680928)
chr7 (174-210)||(20549780-20549816)
[»] chr6 (31 HSPs)
chr6 (157-258)||(10294079-10294181)
chr6 (150-210)||(9027143-9027203)
chr6 (135-210)||(853893-853968)
chr6 (150-258)||(16766662-16766771)
chr6 (150-210)||(5000660-5000720)
chr6 (150-290)||(5732474-5732604)
chr6 (135-203)||(8365560-8365628)
chr6 (137-209)||(12696277-12696348)
chr6 (160-290)||(8805524-8805656)
chr6 (150-258)||(9107355-9107464)
chr6 (159-210)||(9629357-9629408)
chr6 (135-210)||(30866178-30866253)
chr6 (135-209)||(6389693-6389767)
chr6 (160-210)||(9658854-9658904)
chr6 (172-210)||(19040339-19040377)
chr6 (135-203)||(3398569-3398637)
chr6 (150-210)||(7938081-7938141)
chr6 (161-209)||(13851712-13851760)
chr6 (243-290)||(426478-426525)
chr6 (150-209)||(7977865-7977924)
chr6 (167-210)||(20371144-20371187)
chr6 (135-209)||(20518295-20518369)
chr6 (262-292)||(34073276-34073306)
chr6 (150-253)||(34073337-34073441)
chr6 (172-210)||(34172180-34172218)
chr6 (157-210)||(426548-426601)
chr6 (249-290)||(2117134-2117175)
chr6 (169-210)||(7265627-7265668)
chr6 (160-254)||(26562664-26562759)
chr6 (158-210)||(8777007-8777059)
chr6 (150-210)||(34595099-34595159)
[»] chr8 (12 HSPs)
chr8 (157-258)||(22651948-22652050)
chr8 (152-258)||(29510289-29510396)
chr8 (135-203)||(25192388-25192456)
chr8 (144-210)||(926822-926888)
chr8 (157-210)||(27213519-27213572)
chr8 (135-203)||(126390-126457)
chr8 (135-210)||(13436998-13437073)
chr8 (167-210)||(31109552-31109595)
chr8 (148-210)||(24362236-24362298)
chr8 (177-210)||(39954313-39954346)
chr8 (170-210)||(31236611-31236651)
chr8 (167-243)||(37283812-37283887)
[»] chr2 (20 HSPs)
chr2 (135-246)||(21782817-21782927)
chr2 (135-195)||(33519736-33519796)
chr2 (135-210)||(20539708-20539783)
chr2 (150-241)||(4332891-4332981)
chr2 (160-210)||(21616737-21616787)
chr2 (148-209)||(4142875-4142936)
chr2 (135-208)||(19536434-19536507)
chr2 (134-207)||(23717976-23718048)
chr2 (134-207)||(24105648-24105720)
chr2 (243-290)||(19536361-19536408)
chr2 (243-290)||(19574031-19574078)
chr2 (183-241)||(1327976-1328033)
chr2 (243-289)||(18255945-18255991)
chr2 (243-289)||(34691770-34691816)
chr2 (243-289)||(34714182-34714228)
chr2 (160-258)||(36409614-36409711)
chr2 (150-235)||(18276486-18276570)
chr2 (136-201)||(21624217-21624282)
chr2 (254-290)||(42511322-42511358)
chr2 (185-258)||(44860320-44860394)
[»] scaffold0306 (1 HSPs)
scaffold0306 (134-210)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (135-290)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (134-210)||(21902-21978)
[»] chr3 (22 HSPs)
chr3 (148-247)||(5441029-5441128)
chr3 (135-210)||(8383207-8383282)
chr3 (166-231)||(5407261-5407325)
chr3 (171-260)||(8039818-8039908)
chr3 (150-209)||(24205076-24205135)
chr3 (135-201)||(8842280-8842346)
chr3 (150-210)||(28917966-28918026)
chr3 (150-209)||(4991002-4991061)
chr3 (144-203)||(10335327-10335386)
chr3 (135-258)||(25064859-25064981)
chr3 (135-210)||(55401025-55401100)
chr3 (254-292)||(4466538-4466576)
chr3 (262-292)||(5440965-5440995)
chr3 (136-210)||(8587055-8587129)
chr3 (159-209)||(9800014-9800064)
chr3 (254-292)||(13807237-13807275)
chr3 (136-210)||(32429414-32429488)
chr3 (174-231)||(1438793-1438849)
chr3 (158-210)||(2620087-2620139)
chr3 (150-210)||(15796328-15796388)
chr3 (158-210)||(26492239-26492291)
chr3 (254-290)||(27505334-27505370)
[»] chr1 (19 HSPs)
chr1 (158-210)||(6427323-6427375)
chr1 (150-210)||(40917716-40917776)
chr1 (151-210)||(398799-398858)
chr1 (237-290)||(48547938-48547991)
chr1 (158-210)||(2896155-2896207)
chr1 (143-289)||(10572535-10572690)
chr1 (134-209)||(5376535-5376609)
chr1 (166-210)||(12443494-12443538)
chr1 (174-210)||(17831565-17831601)
chr1 (174-210)||(36878450-36878486)
chr1 (157-249)||(1486703-1486796)
chr1 (150-250)||(38503285-38503386)
chr1 (148-203)||(48040503-48040558)
chr1 (157-235)||(1262856-1262933)
chr1 (160-210)||(9709795-9709845)
chr1 (160-210)||(34298411-34298461)
chr1 (135-189)||(39130822-39130876)
chr1 (174-210)||(19562655-19562691)
chr1 (135-195)||(34315663-34315722)
[»] scaffold0168 (3 HSPs)
scaffold0168 (144-290)||(21002-21149)
scaffold0168 (229-290)||(21217-21278)
scaffold0168 (229-290)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (150-210)||(8763-8823)
[»] scaffold0475 (1 HSPs)
scaffold0475 (150-209)||(3281-3340)
[»] scaffold0007 (1 HSPs)
scaffold0007 (150-209)||(225303-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (150-258)||(241559-241668)
[»] scaffold0004 (1 HSPs)
scaffold0004 (168-209)||(92790-92831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (175-260)||(53170-53256)
[»] scaffold0018 (2 HSPs)
scaffold0018 (138-210)||(178853-178925)
scaffold0018 (168-209)||(192284-192325)
[»] chr4 (8 HSPs)
chr4 (150-210)||(23293020-23293080)
chr4 (174-209)||(35723420-35723455)
chr4 (174-208)||(17345451-17345485)
chr4 (152-209)||(847918-847975)
chr4 (139-208)||(28084475-28084544)
chr4 (157-210)||(36635296-36635349)
chr4 (246-290)||(18844423-18844467)
chr4 (254-290)||(28470448-28470484)
[»] scaffold0450 (1 HSPs)
scaffold0450 (262-290)||(8564-8592)
[»] scaffold0027 (1 HSPs)
scaffold0027 (244-292)||(46731-46778)


Alignment Details
Target: chr5 (Bit Score: 265; Significance: 1e-148; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 38816931 - 38816628
Alignment:
1 aacagagagtcgctgcaggttaaaaatagttgggttttacaattcaattaatgtaatatggtatattgtttgtatcattgcttgaattgaagcaataatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
38816931 aacagagagtcgctgcaggttaaaaatagttgggttttacaattcaattaatgtaatatggtatattgtttgtatcattgtttgaattgaagcaataatt 38816832  T
101 tgagaaaatagaataattgaacggtaaccatatactatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||| ||||    
38816831 tgagaaaatagaataattgaacggtaaccatatactatgaagcactaatacggactcc-------gcacggatactgacacgccgacaccgctaataatt 38816739  T
201 tgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagttatattcgt 300  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
38816738 tgagaaaatcgctatatttcagtataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgattcatagttatattcgt 38816639  T
301 gaatcgtgata 311  Q
    |||||||||||    
38816638 gaatcgtgata 38816628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 19820503 - 19820428
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||||||| |||||||| ||||||||| |||||| |||||||| ||||||||||||| ||||||||||||||    
19820503 ctatgaagcacggatacggacaccggacacgacacggacactgacactccgacaccgctaataatttgagaaaatc 19820428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 290
Target Start/End: Complemental strand, 22423895 - 22423764
Alignment:
161 acacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtc-ggac 257  Q
    ||||| ||||||||||||||| | |||||  |||| |||||||||||||| | ||| |||| ||||||  ||| ||||||||| ||||||||||| ||||    
22423895 acacgacacggatactgacaccctgacactactaataatttgagaaaatcac-ataattcaatataattatatatgtcggtgtcgtgtcggtgtctggac 22423797  T
258 atggctaattcgaggagtgtccgtgcttcatag 290  Q
    | | ||||| |||||||||||||||||||||||    
22423796 acgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 22013364 - 22013431
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttg 202  Q
    |||||||||||| |||||||| ||||||||| |||||| |||||||||||||||| ||||| ||||||    
22013364 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacacagctaataatttg 22013431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 42469171 - 42469245
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    |||||||||||| | |||||| ||| ||||| |||||||| |||||||||||||| | ||| |||||||||||||    
42469171 ctatgaagcacggacacggacaccgaacacgacacggataatgacacgccgacacggataataatttgagaaaat 42469245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 8420075 - 8420124
Alignment:
243 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 292  Q
    |||||||||||||||  | |||||||||||||| ||||||||||||||||    
8420075 gtgtcggtgtcggacgcgcctaattcgaggagtatccgtgcttcatagtt 8420124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 15410532 - 15410483
Alignment:
160 gacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    |||||| |||||| |||||||||||||||||||||| ||||| |||||||    
15410532 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaat 15410483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 6326384 - 6326332
Alignment:
157 ccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    ||||||||| |||||| ||||||||||||||| |||||  |||||||||||||    
6326384 ccggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaat 6326332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 9929668 - 9929720
Alignment:
238 gtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    |||| |||||||| ||||||| | ||||||||||||||||| |||||||||||    
9929668 gtgtcgtgtcggtatcggacacgactaattcgaggagtgtctgtgcttcatag 9929720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 3966492 - 3966577
Alignment:
174 actgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    ||||||| |||||||||||||| |||||||||||||| | | | |||| | ||||  ||||||||||||| ||||| ||||||||||    
3966492 actgacatgccgacaccgctaataatttgagaaaatcac-acaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggaca 3966577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 34879332 - 34879375
Alignment:
167 cacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||    
34879332 cacggatacggacacgccggcaccgctaaaaatttgagaaaatc 34879375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 15382442 - 15382500
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaa 208  Q
    |||||| ||||||||| |||||| | |||||||||||||| ||||| ||||||| ||||    
15382442 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaa 15382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Complemental strand, 24906280 - 24906250
Alignment:
262 ctaattcgaggagtgtccgtgcttcatagtt 292  Q
    |||||||||||||||||||||||||||||||    
24906280 ctaattcgaggagtgtccgtgcttcatagtt 24906250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 6035472 - 6035505
Alignment:
174 actgacacgccgacaccgctaacaatttgagaaa 207  Q
    |||||||||||||||||||||| |||||||||||    
6035472 actgacacgccgacaccgctaataatttgagaaa 6035505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 17123037 - 17123073
Alignment:
174 actgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||||||| |||||||||| ||||||||||||||    
17123037 actgacacgccaacaccgctaataatttgagaaaatc 17123073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 21522722 - 21522766
Alignment:
157 ccggacacggcacggatactgacacgccgacaccgctaacaattt 201  Q
    ||||||||| |||||| |||||||||||||||| ||||| |||||    
21522722 ccggacacgacacggacactgacacgccgacacagctaataattt 21522766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 21533288 - 21533332
Alignment:
157 ccggacacggcacggatactgacacgccgacaccgctaacaattt 201  Q
    ||||||||| |||||| |||||||||||||||| ||||| |||||    
21533288 ccggacacgacacggacactgacacgccgacacagctaataattt 21533332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 27144452 - 27144488
Alignment:
174 actgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||||||||||||||||| |||||||| |||||    
27144452 actgacacgccgacaccgctaataatttgaggaaatc 27144488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 27944991 - 27945065
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    |||||||||||| |||||||| ||||||||| |||||| ||||||||||||||||| |||| |||||||||||||    
27944991 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaat 27945065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 11722185 - 11722132
Alignment:
157 ccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
11722185 ccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatc 11722132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 24105629 - 24105702
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    |||||||||||| ||||||| | |||||||| |||||| |||||||||||||||| ||||| ||||||| |||||    
24105629 ctatgaagcacggatacgga-tacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 24105702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 29787435 - 29787354
Alignment:
178 acacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatg 260  Q
    |||||||||||||||||| |||||||||||||| | ||| |||| | ||||||||||| |||||  ||||||||| |||||||    
29787435 acacgccgacaccgctaataatttgagaaaatcac-ataattcagtgtaattatgtgttggtgtaatgtcggtgttggacatg 29787354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 258
Target Start/End: Original strand, 24339605 - 24339716
Alignment:
148 atacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtg 245  Q
    |||||||| ||||||||| || ||| | |||||||||||||| ||||| ||||||| |||||| | ||| |||| | |||||  | |||||||||| |||    
24339605 atacggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaagtgtcggtgtcgtg 24339703  T
246 tcggtgtcggaca 258  Q
    |||||||||||||    
24339704 tcggtgtcggaca 24339716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 19206025 - 19206107
Alignment:
160 gacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 241  Q
    |||||| |||||| ||  |||||||||||||||||| |||||||||||||| | ||| |||||||||||  |||||||||||||    
19206025 gacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcac-ataattcattataattatatgtgtcggtgt 19206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 32308109 - 32308194
Alignment:
174 actgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    |||||||||||||||||||||| |||||||||||||| | ||| |||| | ||||  |||||||| |||| |||||||||| |||||    
32308109 actgacacgccgacaccgctaataatttgagaaaatcac-ataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggaca 32308194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 290
Target Start/End: Original strand, 11700798 - 11700909
Alignment:
180 acgccgacaccgctaacaatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcgg--acatggctaattcgaggagtgt 277  Q
    |||| ||||||| ||| ||||||| |||||| | ||| |||| | |||||||||||| |||| || ||||||||||  ||| ||||||| ||||||||||    
11700798 acgctgacaccgttaataatttgacaaaatcac-ataattcaatgtaattatgtgtctgtgttgtctcggtgtcggacacacggctaatccgaggagtgt 11700896  T
278 ccgtgcttcatag 290  Q
    || || |||||||    
11700897 ccctgattcatag 11700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 1433419 - 1433479
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| ||| ||||| |||||| | |||||||||||||||| ||| ||||||||||||||    
1433419 acggacaccgaacacgacacggacattgacacgccgacaccgttaataatttgagaaaatc 1433479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 290
Target Start/End: Complemental strand, 7328805 - 7328639
Alignment:
130 atatactatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataat- 228  Q
    ||||||||||||||||| |||||||| ||| ||||| ||| || | | ||||| ||| || ||||| |||||||||||||  | ||| || | | ||||     
7328805 atatactatgaagcacggatacggacaccgaacacgacacagacattaacacgtcgatactgctaataatttgagaaaataac-ataatttagtgtaatt 7328707  T
229 -tatgtgtcggtgtggtgtc-----ggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
     ||||||||||||| |||||     ||||||||||| | ||||| ||| |||||| ||||||||||||    
7328706 atatgtgtcggtgtcgtgtcgtgttggtgtcggacacgcctaatccgatgagtgttcgtgcttcatag 7328639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 2034392 - 2034462
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaa 206  Q
    |||||||||||| ||||||| | | |||||| |||||||||| ||||| ||||||| |||| ||||||||||    
2034392 ctatgaagcacggatacgga-tactgacacgacacggatacttacacgtcgacaccactaataatttgagaa 2034462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 2425818 - 2425767
Alignment:
159 ggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||| ||| ||||||||||||||| ||||| ||| ||||||||||||||    
2425818 ggacacgacacagatactgacacgccggcaccgttaataatttgagaaaatc 2425767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 43027578 - 43027503
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||||||| || ||||| | ||||||| |||||| ||||||||| |||| | ||||| ||||||| ||||||    
43027578 ctatgaagcacggatgcggacactggacacgacacggacactgacacggcgacccagctaataatttgaaaaaatc 43027503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 43249958 - 43250017
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    |||||| ||||||| | |||||| |||||||||||||||| | ||| |||||||||||||    
43249958 acggacaccggacaagacacggacactgacacgccgacacggataataatttgagaaaat 43250017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 8046103 - 8046061
Alignment:
168 acggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||    
8046103 acggatactgacacgccaacaccactaataatttgagaaaatc 8046061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 22484014 - 22484082
Alignment:
174 actgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 241  Q
    |||||||||||||||||||||| ||||| ||||||| || ||| |||| ||||||  |||||||||||||    
22484014 actgacacgccgacaccgctaataattttagaaaattgc-ataattcagtataattatatgtgtcggtgt 22484082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 23191879 - 23191921
Alignment:
168 acggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||| ||||| |||||||||||||||| ||||||||||||||    
23191879 acggacactgatacgccgacaccgctaataatttgagaaaatc 23191921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 26733279 - 26733329
Alignment:
160 gacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| |||||| ||||||||| |||||||||||| ||||||| ||||||    
26733279 gacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatc 26733329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 30731031 - 30731104
Alignment:
179 cacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtc 253  Q
    |||||||||||||| || |||||||||||||| | ||| |||| | ||||| ||||||||||| |||| ||||||    
30731031 cacgccgacaccgcgaataatttgagaaaatcac-ataattcagtgtaattgtgtgtcggtgtcgtgttggtgtc 30731104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 11072290 - 11072362
Alignment:
177 gacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggt 250  Q
    ||||||||||||||| ||| ||||||| ||||    |||| |||| ||||||||||||||||||| ||||||||    
11072290 gacacgccgacaccgataataatttgaaaaaaata-tataattcaatataattatgtgtcggtgtcgtgtcggt 11072362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 291
Target Start/End: Original strand, 17852091 - 17852120
Alignment:
262 ctaattcgaggagtgtccgtgcttcatagt 291  Q
    ||||||||||||||||||||||||||||||    
17852091 ctaattcgaggagtgtccgtgcttcatagt 17852120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 49107795 - 49107844
Alignment:
159 ggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaa 208  Q
    ||||||| ||||||  ||||||| ||||||||||||| ||||||||||||    
49107795 ggacacgacacggactctgacacaccgacaccgctaataatttgagaaaa 49107844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Original strand, 15680900 - 15680928
Alignment:
262 ctaattcgaggagtgtccgtgcttcatag 290  Q
    |||||||||||||||||||||||||||||    
15680900 ctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 20549780 - 20549816
Alignment:
174 actgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||| ||||||||||||| ||||||||||||||    
20549780 actgacacaccgacaccgctaataatttgagaaaatc 20549816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 10294079 - 10294181
Alignment:
157 ccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcg 254  Q
    ||||||||| |||||||||||||| ||||| |||||||| ||||||||| |||||| |||||||| | ||||  ||||||||||||| |||| |||||||    
10294079 ccggacacgacacggatactgacatgccgataccgctaataatttgagataatcgc-atatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcg 10294177  T
255 gaca 258  Q
    ||||    
10294178 gaca 10294181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 9027143 - 9027203
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||||||||||| |||||| |||||||||||||||||||||| ||||||||| ||||    
9027143 acggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatc 9027203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 853968 - 853893
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||| |||| |||||||| ||||||||| ||||||| |||||||||||||||  |||| ||||||| ||||||    
853968 ctatgaatcacggatacggacaccggacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatc 853893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 258
Target Start/End: Original strand, 16766662 - 16766771
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtc 247  Q
    |||||| ||||||||| || ||| |||||||||||||||| ||||| ||||||| |||||| | ||| |||| | |||||  | |||||||||| |||||    
16766662 acggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaagtgtcggtgtcgtgtc 16766760  T
248 ggtgtcggaca 258  Q
    |||||||||||    
16766761 ggtgtcggaca 16766771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 5000720 - 5000660
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| ||||||| | |||||||||||||||| |||||||||||| |||| |||||||||    
5000720 acggacaccggacatgacacggatactgacacgtcgacaccgctaataattcgagaaaatc 5000660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 290
Target Start/End: Complemental strand, 5732604 - 5732474
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcgg 249  Q
    |||||| | ||||||| || ||| |||||||||||||||||| ||| |||||||||||||| | |||||| | | ||||||| |         |||||||    
5732604 acggacactggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcac-atattttagtgtaattatat---------gtgtcgg 5732515  T
250 tgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    ||||||||| | ||||| |||||||||||| ||||||||||    
5732514 tgtcggacacgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 8365628 - 8365560
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttga 203  Q
    |||||||||||| |||||||| || |||||| |||||| ||||||||||||||||  |||| |||||||    
8365628 ctatgaagcacggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttga 8365560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 12696277 - 12696348
Alignment:
137 atgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    |||||||||| |||||||| | ||||||| |||||| |||||||||||||||| ||||| ||||||| |||||    
12696277 atgaagcacggatacggacac-ggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 12696348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 8805656 - 8805524
Alignment:
160 gacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggt---gtcgga 256  Q
    |||||| ||| || || |||||| || ||| ||||| |||||||||||||| | ||| || | | ||||||||||||||||| ||||| |    || |||    
8805656 gacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcac-ataatttagtgtaattatgtgtcggtgtagtgtcagacacgtggga 8805558  T
257 catggctaattcgaggagtgtccgtgcttcatag 290  Q
    |||| ||||| |||||||||||||||||||||||    
8805557 catgcctaatccgaggagtgtccgtgcttcatag 8805524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 258
Target Start/End: Complemental strand, 9107464 - 9107355
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtc 247  Q
    |||||| ||||||||| |||||| ||| |||||||||||| ||||| ||||||| |||||| | | | |||| | |||||  | |||||||||| |||||    
9107464 acggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcac-aaaattcagtgtaattacaagtgtcggtgtcgtgtc 9107366  T
248 ggtgtcggaca 258  Q
    |||||||||||    
9107365 ggtgtcggaca 9107355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 9629357 - 9629408
Alignment:
159 ggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||| |||||||| ||||||||||||||||| || ||||||||||||||    
9629357 ggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatc 9629408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 30866253 - 30866178
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||| |||||||||||| ||||||| | ||| || || ||||| || |||||||||| ||||||||||||||    
30866253 ctatgaagtacgaatacggacaccggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatc 30866178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 6389693 - 6389767
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    |||||||||||| | || ||| ||||||||| |||||| ||| |||||||||||| | ||| |||||||||||||    
6389693 ctatgaagcacggacacagacaccggacacgacacggacactcacacgccgacacggataataatttgagaaaat 6389767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 9658854 - 9658904
Alignment:
160 gacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| |||||| |||||||||||||||||||||| ||||| ||||||||    
9658854 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaatc 9658904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 19040339 - 19040377
Alignment:
172 atactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||||||||||||||||||| ||||||||||||||    
19040339 atactgacacgccgacaccgctaataatttgagaaaatc 19040377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 3398569 - 3398637
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttga 203  Q
    |||||||||| | ||||||||  || ||||| |||||| |||||||||||||||| ||||| |||||||    
3398569 ctatgaagcatggatacggacatcgaacacgacacggacactgacacgccgacacagctaataatttga 3398637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 7938081 - 7938141
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| ||||||||| || ||| |||||||||||||||| ||||| ||||||| ||||||    
7938081 acggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatc 7938141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 13851712 - 13851760
Alignment:
161 acacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    ||||| |||||| ||||||||| |||||||||||| |||||||||||||    
13851712 acacgacacggacactgacacgtcgacaccgctaataatttgagaaaat 13851760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 426525 - 426478
Alignment:
243 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    |||||||||||||||| | |||||  ||||||||||||||||||||||    
426525 gtgtcggtgtcggacacgcctaatctgaggagtgtccgtgcttcatag 426478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 7977924 - 7977865
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    |||||| | ||||||| || |||||||||||||||||||| ||||| ||||||| |||||    
7977924 acggacactggacacgacatggatactgacacgccgacacagctaataatttgaaaaaat 7977865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 20371187 - 20371144
Alignment:
167 cacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| | |||||||||||||||||||| ||||||||||||||    
20371187 cacggacattgacacgccgacaccgctaataatttgagaaaatc 20371144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 20518295 - 20518369
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    |||||||||||| |||||||  ||||| ||| ||| || |||||||| |  ||||| ||||||||||||||||||    
20518295 ctatgaagcacggatacggatgccggatacgacacagacactgacacactaacaccactaacaatttgagaaaat 20518369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Complemental strand, 34073306 - 34073276
Alignment:
262 ctaattcgaggagtgtccgtgcttcatagtt 292  Q
    |||||||||||||||||||||||||||||||    
34073306 ctaattcgaggagtgtccgtgcttcatagtt 34073276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 253
Target Start/End: Complemental strand, 34073441 - 34073337
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 247  Q
    |||||| | ||||||| |||||| ||||||| ||| ||| |||||| |||||||||||||| | ||| |||| | ||||  |||| |||||||| |||||    
34073441 acggacactggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctc-ataattcagtgtaattatatgggtcggtgtcgtgtc 34073343  T
248 ggtgtc 253  Q
    ||||||    
34073342 ggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 34172180 - 34172218
Alignment:
172 atactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||||| ||||||||| |||||||||||||||||||    
34172180 atactgacatgccgacacctctaacaatttgagaaaatc 34172218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 426601 - 426548
Alignment:
157 ccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||||| |||||| |||||||||||||||| | ||| ||||||| ||||||    
426601 ccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatc 426548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 2117134 - 2117175
Alignment:
249 gtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    |||||||||||| |||||  ||||||||||||||||||||||    
2117134 gtgtcggacatgcctaatcggaggagtgtccgtgcttcatag 2117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 7265668 - 7265627
Alignment:
169 cggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||| ||||||||||| |||||||||| ||||||||||||||    
7265668 cggacactgacacgccaacaccgctaataatttgagaaaatc 7265627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 26562664 - 26562759
Alignment:
160 gacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcg 254  Q
    ||||| ||||| | || ||||||||||||| ||||| |||||||||||||| | ||| |||| | ||||  ||||||||| ||| ||||||||||||    
26562664 gacaccgcacgaacacggacacgccgacactgctaaaaatttgagaaaatcac-ataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcg 26562759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 8777059 - 8777007
Alignment:
158 cggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||| |||||| ||||||||||||||||  |||| ||||||| ||||||    
8777059 cggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatc 8777007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 34595099 - 34595159
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| ||||||||| |||||| | ||||||||||||||  |||| ||||||| ||||||    
34595099 acggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatc 34595159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 22651948 - 22652050
Alignment:
157 ccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcg 254  Q
    ||||||||| |||||| |||||||||||||||| ||||| ||||||| |||||| | ||| |||| |||||||  | |||||||||| ||||||||||||    
22651948 ccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcac-ataattcaatataattacaagtgtcggtgtcgtgtcggtgtcg 22652046  T
255 gaca 258  Q
    ||||    
22652047 gaca 22652050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 29510396 - 29510289
Alignment:
152 ggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcgg 249  Q
    |||| ||||||||| |||||| |||||||||||||||| ||||| ||||||| |||||| | | | |||| |||||||  | |||||||||| |||||||    
29510396 ggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcac-aaaattcagtataattacaagtgtcggtgtagtgtcgg 29510298  T
250 tgtcggaca 258  Q
    |||||||||    
29510297 tgtcggaca 29510289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 25192456 - 25192388
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttga 203  Q
    |||||||||||||||||||||  ||||||||  ||||| |||||||||||||||| ||||| |||||||    
25192456 ctatgaagcacgaatacggacatcggacacgatacggacactgacacgccgacacagctaataatttga 25192388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 926888 - 926822
Alignment:
144 acgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||| |||||| ||||||||| |||||| ||||||||||| ||||  |||| ||||||||||||||    
926888 acgaacacggacaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaatc 926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 27213519 - 27213572
Alignment:
157 ccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||||| ||||||||| ||||||||||||| ||||| ||||| ||||||||    
27213519 ccggacacgacacggatacagacacgccgacactgctaataatttcagaaaatc 27213572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 126457 - 126390
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttga 203  Q
    |||||||||||| ||||| || | |||||||  ||||||||||||||||| |||||||||| |||||||    
126457 ctatgaagcacggatacgcacac-ggacacgatacggatactgacacgccaacaccgctaataatttga 126390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 13437073 - 13436998
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||||||| | | |||| ||||||| | || ||| |||||||||||||||| ||||| ||||||| ||||||    
13437073 ctatgaagcacggacatggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatc 13436998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 31109595 - 31109552
Alignment:
167 cacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    
31109595 cacggacactgacacgccgacaccgttaataatttgagaaaatc 31109552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 24362298 - 24362236
Alignment:
148 atacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||| ||||| ||| ||| || || ||||||||||||||||||| ||||||||| ||||    
24362298 atacggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatc 24362236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 39954346 - 39954313
Alignment:
177 gacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||||||||||||||| ||||||||||||||    
39954346 gacacgccgacaccgctaataatttgagaaaatc 39954313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 31236651 - 31236611
Alignment:
170 ggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| ||||||||||||| ||||| ||||||||||||||    
31236651 ggatacggacacgccgacactgctaataatttgagaaaatc 31236611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 37283887 - 37283812
Alignment:
167 cacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattatgtgtcggtgtgg 243  Q
    |||||| ||||||| || | ||||||||| ||| |||||||||| | ||| |||| | |||||||||||||||||||    
37283887 cacggacactgacatgcgggcaccgctaataatctgagaaaatcac-ataattcagtgtaattatgtgtcggtgtgg 37283812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 246
Target Start/End: Complemental strand, 21782927 - 21782817
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattatgtg 234  Q
    ||||||||||||||||| ||| | ||||||| |||  | |||||||||||||||| ||||| |||||||||||||| | ||| |||| | ||||||||||    
21782927 ctatgaagcacgaatacagacactggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcac-ataattcagtgtaattatgtg 21782829  T
235 tcggtgtggtgt 246  Q
     |||||| ||||    
21782828 ccggtgtcgtgt 21782817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 33519736 - 33519796
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaa 195  Q
    |||||||||||| |||||||| ||||||||| | ||||||||||||| |||||||||||||    
33519736 ctatgaagcacggatacggacaccggacacgacgcggatactgacacaccgacaccgctaa 33519796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 20539783 - 20539708
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||||||| |||||||| | ||||||| |||||| ||||||||| |||||| ||||| ||||||| ||||||    
20539783 ctatgaagcacggatacggacactggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatc 20539708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 4332891 - 4332981
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattatgtgtcggtgt 241  Q
    |||||| ||||||||||||| |||||| ||| |||||||| | ||| |||||| ||||||| | ||| |||| | |||||||||||||||||    
4332891 acggacaccggacacggcacagatacttacatgccgacactgataataatttgggaaaatcac-ataattcaatgtaattatgtgtcggtgt 4332981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 21616737 - 21616787
Alignment:
160 gacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| |||||| || ||||||||||||||||||| ||||||||||||||    
21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatc 21616787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 4142936 - 4142875
Alignment:
148 atacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    |||||||| ||| ||||| | |||| ||||||||||||||||| |||||||||| |||||||    
4142936 atacggacaccgaacacgacccggacactgacacgccgacaccactaacaatttaagaaaat 4142875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 19536507 - 19536434
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaa 208  Q
    |||||||||||  |||||||| ||||||||| |||||| | ||||||||||||||  |||| ||||||| ||||    
19536507 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaa 19536434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 23717976 - 23718048
Alignment:
134 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaa 207  Q
    ||||||||||||| |||| ||| | ||||| | |||||| |||||||| ||||||||||||| |||||||||||    
23717976 actatgaagcacggatacagacac-ggacatgacacggacactgacacaccgacaccgctaataatttgagaaa 23718048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 24105648 - 24105720
Alignment:
134 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaa 207  Q
    ||||||||||||| |||| ||| | ||||| | |||||| |||||||| ||||||||||||| |||||||||||    
24105648 actatgaagcacggatacagacac-ggacatgacacggacactgacacaccgacaccgctaataatttgagaaa 24105720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 19536408 - 19536361
Alignment:
243 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    |||||||||||||||| | ||||| |||||||||||| ||||||||||    
19536408 gtgtcggtgtcggacacgcctaatccgaggagtgtccatgcttcatag 19536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 19574031 - 19574078
Alignment:
243 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    ||||||||||||||||   |||||||||||||||||| ||||||||||    
19574031 gtgtcggtgtcggacacacctaattcgaggagtgtccatgcttcatag 19574078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 1327976 - 1328033
Alignment:
183 ccgacaccgctaacaatttgagaaaatcgctatatttcattataattatgtgtcggtgt 241  Q
    ||||||||||||| ||||||||||||||  || | |||| |||||||||||||||||||    
1327976 ccgacaccgctaataatttgagaaaatc-ataaaattcagtataattatgtgtcggtgt 1328033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 18255991 - 18255945
Alignment:
243 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 289  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||    
18255991 gtgtcggtgtcggacacgcctaatccaaggagtgtccgtgcttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 34691816 - 34691770
Alignment:
243 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 289  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
34691816 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34691770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 34714228 - 34714182
Alignment:
243 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 289  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
34714228 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34714182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 36409711 - 36409614
Alignment:
160 gacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    |||||| |||||||||| ||| |||||||||||| | ||||||| |||||| | ||| || | | |||||||||||||||||  ||| |||||| ||||    
36409711 gacacgacacggatactcacatgccgacaccgctgataatttgaaaaaatcac-ataatttagtgtaattatgtgtcggtgtcatgttggtgtctgaca 36409614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 18276486 - 18276570
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattatgtgt 235  Q
    |||||| |||||||||  || || ||||| | |||||||||||||| |||||||||||||| || || |||| | |||||||||||    
18276486 acggacaccggacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcact-taattcagtgtaattatgtgt 18276570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 21624217 - 21624282
Alignment:
136 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaattt 201  Q
    |||||||| || |||||||| ||| ||||| ||| || |||||||||||||||| ||||| |||||    
21624217 tatgaagcccggatacggacaccgaacacgacacagacactgacacgccgacacagctaataattt 21624282  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 290
Target Start/End: Complemental strand, 42511358 - 42511322
Alignment:
254 ggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    ||||| ||||||| |||||||||||||||||||||||    
42511358 ggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 44860320 - 44860394
Alignment:
185 gacaccgctaacaatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    ||||||||||| |||||||||||||||| ||| |||| | ||||  ||||||||||||| |||| ||||| |||||    
44860320 gacaccgctaataatttgagaaaatcgc-ataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggaca 44860394  T

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Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 13349 - 13425
Alignment:
134 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||||||||| |||||||| ||||| | | |||||| ||||||||||||||||  |||| ||||||||||||||    
13349 actatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatc 13425  T

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Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 290
Target Start/End: Original strand, 20122 - 20279
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataatt--atg 232  Q
    |||||||||||  |||||||| ||||||||| |||||| | |||||||||||||| ||||| ||||||| |||||| | ||| |||| | |||||  | |    
20122 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaag 20220  T
233 tgtcggtgtggtgtcggtgtcggacatggctaattcgaggagt---gtccgtgcttcatag 290  Q
    |||| |||| |||||||||  ||||| | ||||| ||||||||   |||||||||||||||    
20221 tgtcagtgtcgtgtcggtg--ggacacgcctaatccgaggagtacagtccgtgcttcatag 20279  T

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Target: scaffold0152 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 21978 - 21902
Alignment:
134 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||||||||| |||||||| ||||| | | |||||| ||||||||||||||||  |||| ||||||||||||||    
21978 actatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatc 21902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 5441128 - 5441029
Alignment:
148 atacggac-tccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgt 246  Q
    |||||||| |||||||||| ||| || |||||||||||| ||||||||| |||||||||||||| | ||| |||| |  |||||||||||||||| ||||    
5441128 atacggacatccggacacgacacagacactgacacgccgtcaccgctaaaaatttgagaaaatcac-ataattcaatggaattatgtgtcggtgttgtgt 5441030  T

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Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 8383207 - 8383282
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||| |||||| | |||||| | ||||||| |||||| | |||||||||||||||||||| ||||||||||||||    
8383207 ctatgtagcacggacacggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatc 8383282  T

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Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 5407325 - 5407261
Alignment:
166 gcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattat 231  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| | ||| |||||| |||||||    
5407325 gcacggataccgacacgccgacaccgctaaaaatttgagaaaatcac-ataattcattgtaattat 5407261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 8039908 - 8039818
Alignment:
171 gatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggacatg 260  Q
    |||| ||||||||| |||||||||| |||||||||||||   |||| |||| | ||||  ||||||||||||| ||||||||||||||||||    
8039908 gatattgacacgccaacaccgctaataatttgagaaaat-tatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatg 8039818  T

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Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 24205135 - 24205076
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    |||||| ||||||||| |||||| |||||||||||||||| | ||| |||||||||||||    
24205135 acggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaat 24205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 8842280 - 8842346
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaattt 201  Q
    |||||||||||| |||||||| ||||| ||| |||||| | ||||| |||||||||||||| |||||    
8842280 ctatgaagcacggatacggacaccggatacgacacggaaattgacatgccgacaccgctaataattt 8842346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 28917966 - 28918026
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| ||||||||| |||||| |||||||||||||||  ||||| ||||||| ||||||    
28917966 acggacaccggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatc 28918026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 4991061 - 4991002
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    |||||| ||| ||||| |||||| |||||||| ||||||||||||| | |||||||||||    
4991061 acggacaccgaacacgacacggagactgacactccgacaccgctaatagtttgagaaaat 4991002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 10335386 - 10335327
Alignment:
144 acgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttga 203  Q
    ||||| |||||| ||||||||| |||||| ||||||||||||||||  |||| |||||||    
10335386 acgaacacggacaccggacacgacacggacactgacacgccgacacaactaataatttga 10335327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 258
Target Start/End: Original strand, 25064859 - 25064981
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattatgtg 234  Q
    ||||||| ||||  ||| ||| ||||||||| ||| || | ||||||||||||||||||||  |||||| |||||| | ||| || | | ||||||||||    
25064859 ctatgaaacacgggtacagacaccggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcac-ataatttagtgtaattatgtg 25064957  T
235 tcggtgtggtgtcggtgtcggaca 258  Q
    | ||| | |||| |||||||||||    
25064958 ttggtatcgtgttggtgtcggaca 25064981  T

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Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 55401025 - 55401100
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||||||  |||||||| ||||| ||| |||||| ||||| ||||||||||  |||| ||||||| ||||||    
55401025 ctatgaagcacagatacggacaccggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatc 55401100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 4466576 - 4466538
Alignment:
254 ggacatggctaattcgaggagtgtccgtgcttcatagtt 292  Q
    ||||| |||| ||||||||||||||||||||||||||||    
4466576 ggacacggcttattcgaggagtgtccgtgcttcatagtt 4466538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Complemental strand, 5440995 - 5440965
Alignment:
262 ctaattcgaggagtgtccgtgcttcatagtt 292  Q
    |||||||||||||||||||||||||||||||    
5440995 ctaattcgaggagtgtccgtgcttcatagtt 5440965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 8587129 - 8587055
Alignment:
136 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||||||  |||||||| ||||||| | |||||| ||||||||||||||||  |||  ||||||| ||||||    
8587129 tatgaagcacagatacggacaccggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatc 8587055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 9800014 - 9800064
Alignment:
159 ggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    ||||||| |||| | ||||||||||||||||| |||| |||||||||||||    
9800014 ggacacgacacgtacactgacacgccgacacctctaataatttgagaaaat 9800064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 13807237 - 13807275
Alignment:
254 ggacatggctaattcgaggagtgtccgtgcttcatagtt 292  Q
    ||||||| ||||||||||||||||||||| |||||||||    
13807237 ggacatgcctaattcgaggagtgtccgtgtttcatagtt 13807275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 32429488 - 32429414
Alignment:
136 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||||||| |||||||| ||||||||  |||| | | |||||| |||||| |||||| ||||| ||||||||    
32429488 tatgaagcacgtatacggacaccggacacaacacgaacattgacactccgacaacgctaataatttaagaaaatc 32429414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 1438793 - 1438849
Alignment:
174 actgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattat 231  Q
    |||||||| |||||| ||||||||||||||||||||| | ||| |||| |||||||||    
1438793 actgacacaccgacatcgctaacaatttgagaaaatcac-ataattcagtataattat 1438849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 2620139 - 2620087
Alignment:
158 cggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||| | |||| ||||||||||||||||| ||||  |||||||||||||    
2620139 cggacacgactcggacactgacacgccgacaccactaatcatttgagaaaatc 2620087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 15796388 - 15796328
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| ||||||||| |||||| | |||||||||||||| | ||| ||||||| ||||||    
15796388 acggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatc 15796328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 26492291 - 26492239
Alignment:
158 cggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||| |||||| |||||||||||||||  ||||| ||||||| ||||||    
26492291 cggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatc 26492239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 27505334 - 27505370
Alignment:
254 ggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    ||||||| ||||| |||||||||||||||||||||||    
27505334 ggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 6427323 - 6427375
Alignment:
158 cggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||||||||||    
6427323 cggacacggcacggacactgacacgccaacaccgctaataatttgagaaaatc 6427375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 40917716 - 40917776
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| ||||||||| ||||||||||||||||||||||| ||||| ||||||| ||||||    
40917716 acggacaccggacacgacacggatactgacacgccgacacagctaataatttgaaaaaatc 40917776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 398858 - 398799
Alignment:
151 cggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||| ||||||| ||||||    
398858 cggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatc 398799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 48547991 - 48547938
Alignment:
237 ggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    ||||| |||||||||||||| | | |||||||||||||||||||||||||||||    
48547991 ggtgtcgtgtcggtgtcggatacgcctaattcgaggagtgtccgtgcttcatag 48547938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 2896207 - 2896155
Alignment:
158 cggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||  |||||| |||||||||||||||||||||| ||||||||||||||    
2896207 cggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatc 2896155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 289
Target Start/End: Complemental strand, 10572690 - 10572535
Alignment:
143 cacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataatt--atgtgtcggtg 240  Q
    |||| |||||||| ||||||||| || | | ||||||||||||||||| |||| |||||||||||||| | ||| |||  | |||||  |||||||||||    
10572690 cacggatacggacaccggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcac-ataattcggtgtaattaaatgtgtcggtg 10572592  T
241 tggtgtcggtgtc--------ggacatggctaattcgaggagtgtccgtgcttcata 289  Q
    | |||| ||||||        ||||| | ||||||| ||||||||||||||||||||    
10572591 ttgtgttggtgtcaggcacgtggacacgcctaattcaaggagtgtccgtgcttcata 10572535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 5376609 - 5376535
Alignment:
134 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    ||||||| ||||| |||| || |||||||||| |||||| ||| |||||||||||||||||| ||||| |||||||    
5376609 actatgaggcacgtatacaga-tccggacacgacacggacactaacacgccgacaccgctaataatttaagaaaat 5376535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 12443538 - 12443494
Alignment:
166 gcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||    
12443538 gcacggatacggacacgccgacacagctaataatttgagaaaatc 12443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 17831601 - 17831565
Alignment:
174 actgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||||||||||||||||| ||||||||||||||    
17831601 actgacacgccgacaccgctaataatttgagaaaatc 17831565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 36878450 - 36878486
Alignment:
174 actgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||||||||||||||||| ||||||||||||||    
36878450 actgacacgccgacaccgctaataatttgagaaaatc 36878486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 1486796 - 1486703
Alignment:
157 ccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcgg 249  Q
    ||||| ||| ||||||||||||||||| ||||| ||||| ||||||| |||||| | ||| |||| | |||||||  |||||||||| |||||||    
1486796 ccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcac-ataattcagtgtaattataagtgtcggtgtcgtgtcgg 1486703  T

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Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 38503285 - 38503386
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 247  Q
    |||||| | ||||| | |||||| ||| |||| ||||||||||||| ||||||||||||||  ||||||||| | ||||  |||||||||||||  ||||    
38503285 acggacacgggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatc-atatatttcagtgtaattatatgtgtcggtgtcctgtc 38503383  T
248 ggt 250  Q
    |||    
38503384 ggt 38503386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 48040558 - 48040503
Alignment:
148 atacggactccggacacggcacggatactgacacgccgacaccgctaacaatttga 203  Q
    |||||||| ||||||||| |||||| |||||||||||||||| | ||| |||||||    
48040558 atacggacaccggacacgacacggacactgacacgccgacacagataataatttga 48040503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 1262856 - 1262933
Alignment:
157 ccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattatgtgt 235  Q
    ||||||||| |||| | || ||||||||||||| ||||| |||||||||||||| | ||| |||| |||||||| ||||    
1262856 ccggacacgacacgaacacggacacgccgacacagctaataatttgagaaaatcac-ataattcaatataattaagtgt 1262933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 9709795 - 9709845
Alignment:
160 gacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| |||||| ||||||| ||| |||||||||| ||||||||||||||    
9709795 gacacgacacggacactgacatgcctacaccgctaataatttgagaaaatc 9709845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 34298411 - 34298461
Alignment:
160 gacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| |||||| |||||||| |||||||| |||| ||||||||||||||    
34298411 gacacgacacggaaactgacacaccgacaccactaataatttgagaaaatc 34298461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 39130876 - 39130822
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacac 189  Q
    |||||||||||| |||||||| ||||||||| || ||||| |||||||| |||||    
39130876 ctatgaagcacggatacggacaccggacacgacatggatattgacacgctgacac 39130822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 19562691 - 19562655
Alignment:
174 actgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||||||||||||| ||||| ||||||||||||||    
19562691 actgacacgccgacactgctaataatttgagaaaatc 19562655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 34315663 - 34315722
Alignment:
135 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaa 195  Q
    |||||||||||| ||||||| |  ||||||| |||||||||||||| |||||||| |||||    
34315663 ctatgaagcacggatacgga-tatggacacgacacggatactgacatgccgacacagctaa 34315722  T

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Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 290
Target Start/End: Original strand, 21002 - 21149
Alignment:
144 acgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattat--gtgtcggtgt 241  Q
    ||||| |||||| || |||||| |||||| ||||||| || ||||| | ||| |||||||||||||| | |||  ||  |||||||||  |||||||| |    
21002 acgaacacggacaccagacacgacacggacactgacatgctgacacggttaataatttgagaaaatcac-ataagtcggtataattatatgtgtcggtat 21100  T
242 ggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
     ||||||||||| |||| | ||||| |||| ||| ||||||||||||||    
21101 cgtgtcggtgtcagacacgcctaatccgagaagtatccgtgcttcatag 21149  T

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Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 21217 - 21278
Alignment:
229 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    ||||||||||| | ||||||||||| |||| | ||||| |||||||| ||||||||||||||    
21217 tatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgaggagtatccgtgcttcatag 21278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 21346 - 21407
Alignment:
229 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    ||||||||||| | ||||||||||| |||| | ||||| |||| |||||| |||||||||||    
21346 tatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgagaagtgtctgtgcttcatag 21407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 8763 - 8823
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| ||||||||| |||||| |||||||||||||||| ||||| ||||||| ||||||    
8763 acggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatc 8823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 3281 - 3340
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    |||||| ||||||||| |||||||||||||||| |||||  ||||||||||| |||||||    
3281 acggacaccggacacgacacggatactgacacgtcgacaatgctaacaattttagaaaat 3340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 225362 - 225303
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    |||||| ||||||||| |||||| |||||||||||||||| | ||| |||||||||||||    
225362 acggacaccggacacgacacggacactgacacgccgacacagataataatttgagaaaat 225303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 258
Target Start/End: Original strand, 241559 - 241668
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtc 247  Q
    |||||| ||||||||| |||||| |||||||||||||||| ||||| ||||||  |||||| | ||| || | | |||||||  |||||||||| ||||     
241559 acggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcac-ataatttagtgtaattatgagtgtcggtgtcgtgtt 241657  T
248 ggtgtcggaca 258  Q
    |||||||||||    
241658 ggtgtcggaca 241668  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 92790 - 92831
Alignment:
168 acggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
92790 acggacactgacacgccgacaccgctaataatttgagaaaat 92831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 260
Target Start/End: Original strand, 53170 - 53256
Alignment:
175 ctgacacgccgacaccgctaacaatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg 260  Q
    |||||||||||| ||||| || |||||||||||||| | ||| |||| | |||||||  |||||||||  ||||||||||||||||||    
53170 ctgacacgccgataccgccaataatttgagaaaatcac-ataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatg 53256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 178925 - 178853
Alignment:
138 tgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||||| |||  ||| ||||||||| |||||| ||||||||||||||||  |||| ||||||| ||||||    
178925 tgaagcacggatattgacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatc 178853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 192325 - 192284
Alignment:
168 acggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    ||||| |||||||||||||||||| ||| |||||||||||||    
192325 acggacactgacacgccgacaccgttaataatttgagaaaat 192284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 23293080 - 23293020
Alignment:
150 acggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    |||||| ||||||||| |||||| | |||||||||||||| ||||| ||||||| ||||||    
23293080 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatc 23293020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 35723455 - 35723420
Alignment:
174 actgacacgccgacaccgctaacaatttgagaaaat 209  Q
    |||||||||||||||||||||| |||||||||||||    
35723455 actgacacgccgacaccgctaataatttgagaaaat 35723420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 17345485 - 17345451
Alignment:
174 actgacacgccgacaccgctaacaatttgagaaaa 208  Q
    |||||||||||||||||||||| ||||||||||||    
17345485 actgacacgccgacaccgctaataatttgagaaaa 17345451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 847918 - 847975
Alignment:
152 ggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaat 209  Q
    |||| ||||||||| ||| || |||||||||||||  ||||||| |||||||||||||    
847918 ggaccccggacacgacacagacactgacacgccgatgccgctaataatttgagaaaat 847975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 28084475 - 28084544
Alignment:
139 gaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaa 208  Q
    |||||||  |||||||| ||||||||| ||| ||  ||||||||||||||| ||||| ||||||| ||||    
28084475 gaagcacagatacggacaccggacacgacacagacgctgacacgccgacacagctaagaatttgaaaaaa 28084544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 36635296 - 36635349
Alignment:
157 ccggacacggcacggatactgacacgccgacaccgctaacaatttgagaaaatc 210  Q
    ||||||||| | |||| ||||||||||| ||||| |||| ||||||||||||||    
36635296 ccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatc 36635349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 18844467 - 18844423
Alignment:
246 tcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    ||||||||||||| | ||||| |||| ||||||||||||||||||    
18844467 tcggtgtcggacacgcctaatccgagaagtgtccgtgcttcatag 18844423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 28470448 - 28470484
Alignment:
254 ggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    ||||||| ||||| |||||||||||||||||||||||    
28470448 ggacatgcctaatccgaggagtgtccgtgcttcatag 28470484  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Complemental strand, 8592 - 8564
Alignment:
262 ctaattcgaggagtgtccgtgcttcatag 290  Q
    |||||||||||||||||||||||||||||    
8592 ctaattcgaggagtgtccgtgcttcatag 8564  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 46731 - 46778
Alignment:
244 tgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 292  Q
    ||||||||||| ||| | ||||| |||||||||||||||||||||||||    
46731 tgtcggtgtcg-acacgcctaatccgaggagtgtccgtgcttcatagtt 46778  T

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