View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17484_low_11 (Length: 383)

Name: NF17484_low_11
Description: NF17484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17484_low_11
NF17484_low_11
[»] chr3 (36 HSPs)
chr3 (19-246)||(1117999-1118225)
chr3 (247-348)||(14820348-14820449)
chr3 (247-348)||(28561939-28562040)
chr3 (247-348)||(16811575-16811674)
chr3 (247-347)||(14814144-14814244)
chr3 (246-348)||(8067474-8067576)
chr3 (247-348)||(13150405-13150506)
chr3 (247-348)||(39653358-39653459)
chr3 (247-348)||(50347940-50348041)
chr3 (249-347)||(11179887-11179985)
chr3 (247-348)||(16811119-16811220)
chr3 (247-339)||(41473744-41473836)
chr3 (255-348)||(27187188-27187282)
chr3 (250-348)||(13149953-13150051)
chr3 (247-348)||(32227072-32227173)
chr3 (247-337)||(31284127-31284217)
chr3 (260-340)||(32386598-32386678)
chr3 (246-348)||(32227694-32227796)
chr3 (246-345)||(37045229-37045328)
chr3 (247-348)||(25248305-25248407)
chr3 (247-339)||(25238978-25239070)
chr3 (247-346)||(20884968-20885067)
chr3 (289-341)||(2911285-2911338)
chr3 (289-348)||(25230597-25230657)
chr3 (289-348)||(25238184-25238244)
chr3 (289-340)||(25238576-25238628)
chr3 (272-340)||(4067236-4067304)
chr3 (290-348)||(30529880-30529939)
chr3 (247-348)||(25230099-25230200)
chr3 (247-348)||(25237686-25237787)
chr3 (289-329)||(25230989-25231030)
chr3 (247-346)||(7477387-7477486)
chr3 (247-346)||(7494077-7494176)
chr3 (247-337)||(18318860-18318950)
chr3 (256-337)||(53150672-53150753)
chr3 (247-311)||(3900032-3900095)
[»] chr8 (35 HSPs)
chr8 (247-348)||(22548400-22548501)
chr8 (247-348)||(32292135-32292236)
chr8 (247-348)||(22026573-22026675)
chr8 (247-348)||(22548846-22548947)
chr8 (247-348)||(34308330-34308431)
chr8 (247-348)||(34308786-34308887)
chr8 (247-348)||(17103276-17103377)
chr8 (247-342)||(21315961-21316056)
chr8 (247-340)||(27022190-27022283)
chr8 (250-348)||(12100884-12100982)
chr8 (247-348)||(25147730-25147830)
chr8 (263-348)||(41658972-41659057)
chr8 (247-334)||(25148174-25148261)
chr8 (247-348)||(12827105-12827206)
chr8 (247-348)||(31283503-31283604)
chr8 (247-348)||(32292591-32292699)
chr8 (247-348)||(10844466-10844567)
chr8 (247-348)||(27926092-27926193)
chr8 (289-348)||(8080234-8080294)
chr8 (246-348)||(2044252-2044354)
chr8 (247-341)||(6463394-6463489)
chr8 (289-345)||(30527374-30527431)
chr8 (247-311)||(27021840-27021903)
chr8 (247-329)||(9251098-9251180)
chr8 (249-330)||(6466468-6466549)
chr8 (264-337)||(25307969-25308042)
chr8 (272-348)||(15818892-15818968)
chr8 (294-348)||(22705369-22705424)
chr8 (264-334)||(29117444-29117514)
chr8 (281-319)||(3744862-3744900)
chr8 (260-337)||(27819112-27819187)
chr8 (296-337)||(10729828-10729870)
chr8 (289-338)||(33852150-33852200)
chr8 (252-332)||(28453548-28453628)
chr8 (285-332)||(12119225-12119273)
[»] chr6 (33 HSPs)
chr6 (247-348)||(20850515-20850616)
chr6 (247-348)||(17027382-17027483)
chr6 (247-348)||(9352256-9352357)
chr6 (246-348)||(23986167-23986269)
chr6 (247-341)||(7912079-7912173)
chr6 (246-348)||(13191363-13191465)
chr6 (247-348)||(13492526-13492628)
chr6 (246-348)||(2681070-2681172)
chr6 (250-348)||(7912504-7912602)
chr6 (247-346)||(20896538-20896638)
chr6 (247-348)||(23776634-23776735)
chr6 (247-348)||(13492983-13493085)
chr6 (272-342)||(2891170-2891240)
chr6 (272-348)||(2890715-2890791)
chr6 (247-315)||(9440708-9440775)
chr6 (289-348)||(20126074-20126134)
chr6 (247-337)||(15929344-15929434)
chr6 (267-341)||(17730980-17731054)
chr6 (247-340)||(28780312-28780405)
chr6 (247-319)||(6331219-6331290)
chr6 (289-342)||(11062029-11062083)
chr6 (272-348)||(2720439-2720515)
chr6 (289-345)||(3652720-3652777)
chr6 (271-330)||(27334305-27334364)
chr6 (271-330)||(27395045-27395104)
chr6 (247-347)||(21311710-21311810)
chr6 (260-348)||(28583158-28583246)
chr6 (253-348)||(20735889-20735984)
chr6 (247-337)||(20732783-20732872)
chr6 (272-334)||(31415965-31416026)
chr6 (247-348)||(21312165-21312266)
chr6 (262-311)||(21557364-21557412)
chr6 (272-348)||(3653096-3653168)
[»] chr1 (30 HSPs)
chr1 (247-348)||(20054387-20054488)
chr1 (247-348)||(20054843-20054944)
chr1 (247-348)||(20055299-20055400)
chr1 (247-348)||(20055755-20055856)
chr1 (247-348)||(20056211-20056312)
chr1 (247-348)||(20056667-20056768)
chr1 (247-348)||(20057114-20057215)
chr1 (247-348)||(20057570-20057671)
chr1 (247-348)||(50002926-50003027)
chr1 (246-348)||(38341100-38341202)
chr1 (247-348)||(20845512-20845613)
chr1 (247-348)||(46693586-46693687)
chr1 (247-348)||(52250400-52250501)
chr1 (246-348)||(20060190-20060292)
chr1 (247-340)||(20053931-20054024)
chr1 (247-348)||(52250737-52250838)
chr1 (247-348)||(52251074-52251175)
chr1 (247-338)||(16451784-16451875)
chr1 (247-338)||(16460937-16461028)
chr1 (247-348)||(50002558-50002659)
chr1 (247-335)||(35759915-35760003)
chr1 (247-341)||(35759459-35759553)
chr1 (254-341)||(51372732-51372819)
chr1 (247-348)||(31822970-31823071)
chr1 (247-329)||(49996531-49996613)
chr1 (253-319)||(28181350-28181415)
chr1 (272-348)||(43056941-43057017)
chr1 (247-330)||(39582553-39582636)
chr1 (247-308)||(16907470-16907530)
chr1 (289-348)||(43057415-43057475)
[»] scaffold0322 (1 HSPs)
scaffold0322 (247-348)||(19160-19261)
[»] chr5 (34 HSPs)
chr5 (247-348)||(8641886-8641987)
chr5 (247-348)||(34371806-34371907)
chr5 (248-344)||(2474147-2474243)
chr5 (247-348)||(3886452-3886553)
chr5 (247-348)||(3886908-3887009)
chr5 (247-348)||(15512863-15512964)
chr5 (246-348)||(189262-189364)
chr5 (247-348)||(2474599-2474700)
chr5 (245-348)||(17445304-17445407)
chr5 (247-348)||(42788497-42788598)
chr5 (247-342)||(2194004-2194099)
chr5 (247-348)||(22557163-22557265)
chr5 (247-348)||(34372262-34372363)
chr5 (247-342)||(34867978-34868073)
chr5 (247-337)||(30684862-30684952)
chr5 (249-319)||(21883938-21884007)
chr5 (289-348)||(20039367-20039427)
chr5 (247-348)||(22556730-22556832)
chr5 (247-337)||(30720111-30720201)
chr5 (291-348)||(187752-187810)
chr5 (272-348)||(29679983-29680059)
chr5 (289-348)||(1822100-1822160)
chr5 (249-341)||(10927256-10927348)
chr5 (289-340)||(1880278-1880330)
chr5 (246-337)||(20858392-20858483)
chr5 (247-333)||(18750047-18750133)
chr5 (260-341)||(11757145-11757226)
chr5 (264-348)||(24182114-24182198)
chr5 (247-311)||(2058508-2058572)
chr5 (285-348)||(8391210-8391274)
chr5 (289-348)||(27646727-27646787)
chr5 (317-348)||(21886067-21886098)
chr5 (247-339)||(39147135-39147227)
chr5 (293-348)||(38063725-38063780)
[»] chr2 (32 HSPs)
chr2 (247-348)||(32377758-32377859)
chr2 (247-348)||(30966884-30966985)
chr2 (249-348)||(30966428-30966527)
chr2 (246-345)||(33175153-33175252)
chr2 (247-348)||(25337848-25337949)
chr2 (246-348)||(24818519-24818621)
chr2 (255-348)||(32377575-32377668)
chr2 (247-348)||(33771195-33771296)
chr2 (247-348)||(5399668-5399769)
chr2 (247-348)||(1912718-1912819)
chr2 (247-348)||(16379131-16379232)
chr2 (247-321)||(29804869-29804942)
chr2 (286-348)||(29259509-29259572)
chr2 (247-348)||(15639928-15640029)
chr2 (247-348)||(30963114-30963215)
chr2 (289-348)||(16379587-16379647)
chr2 (292-348)||(15620092-15620149)
chr2 (272-334)||(20502172-20502234)
chr2 (246-340)||(25433906-25434000)
chr2 (289-336)||(36924373-36924421)
chr2 (246-348)||(1707235-1707337)
chr2 (290-348)||(8181254-8181313)
chr2 (264-337)||(30961751-30961824)
chr2 (264-348)||(11389677-11389761)
chr2 (264-348)||(11406338-11406422)
chr2 (246-333)||(83226-83313)
chr2 (293-348)||(8256720-8256776)
chr2 (262-332)||(26865119-26865189)
chr2 (285-334)||(18875873-18875923)
chr2 (269-318)||(1952926-1952974)
chr2 (286-334)||(30963609-30963658)
chr2 (247-319)||(13191198-13191269)
[»] scaffold0243 (1 HSPs)
scaffold0243 (247-348)||(1414-1515)
[»] chr7 (38 HSPs)
chr7 (247-348)||(28496048-28496149)
chr7 (247-348)||(2193450-2193551)
chr7 (247-348)||(9125153-9125254)
chr7 (247-348)||(36422445-36422546)
chr7 (247-348)||(43233151-43233252)
chr7 (255-348)||(13122363-13122457)
chr7 (247-348)||(2941608-2941709)
chr7 (247-348)||(7646329-7646430)
chr7 (248-348)||(2189338-2189438)
chr7 (255-348)||(13124994-13125088)
chr7 (246-337)||(28495469-28495560)
chr7 (247-348)||(18833480-18833581)
chr7 (265-342)||(42515744-42515821)
chr7 (247-346)||(6718926-6719025)
chr7 (246-348)||(34405441-34405543)
chr7 (247-348)||(29038871-29038972)
chr7 (247-348)||(7646609-7646710)
chr7 (247-341)||(42515293-42515387)
chr7 (272-341)||(6747952-6748021)
chr7 (247-348)||(36422576-36422677)
chr7 (246-338)||(2611509-2611601)
chr7 (247-307)||(43776321-43776380)
chr7 (246-346)||(2466120-2466219)
chr7 (247-332)||(6747457-6747542)
chr7 (285-348)||(43776178-43776242)
chr7 (261-337)||(31406452-31406530)
chr7 (272-348)||(22529111-22529187)
chr7 (265-329)||(26419104-26419168)
chr7 (289-348)||(3305240-3305300)
chr7 (289-346)||(35474013-35474071)
chr7 (289-337)||(29357348-29357397)
chr7 (247-334)||(31743740-31743827)
chr7 (266-328)||(11372657-11372719)
chr7 (289-348)||(680010-680071)
chr7 (258-334)||(5406449-5406525)
chr7 (286-319)||(7461271-7461304)
chr7 (247-283)||(18833642-18833678)
chr7 (247-334)||(36015320-36015407)
[»] chr4 (45 HSPs)
chr4 (247-347)||(35477855-35477955)
chr4 (247-348)||(4127263-4127364)
chr4 (247-343)||(24629281-24629377)
chr4 (246-348)||(7678466-7678568)
chr4 (247-348)||(49998830-49998931)
chr4 (247-346)||(15268018-15268117)
chr4 (262-348)||(35871821-35871907)
chr4 (247-345)||(50398839-50398937)
chr4 (247-348)||(7381461-7381562)
chr4 (255-348)||(14572007-14572100)
chr4 (247-348)||(23350128-23350229)
chr4 (247-348)||(23943087-23943188)
chr4 (247-348)||(50398383-50398484)
chr4 (247-348)||(4127739-4127835)
chr4 (247-333)||(13266295-13266381)
chr4 (247-339)||(1645594-1645686)
chr4 (260-348)||(14571546-14571634)
chr4 (289-348)||(44470761-44470821)
chr4 (253-347)||(4414238-4414332)
chr4 (246-313)||(50399334-50399400)
chr4 (247-348)||(27578134-27578232)
chr4 (247-319)||(13265860-13265931)
chr4 (247-337)||(5810039-5810129)
chr4 (247-348)||(31816983-31817084)
chr4 (285-348)||(8467695-8467759)
chr4 (262-337)||(27578317-27578392)
chr4 (247-346)||(44471170-44471269)
chr4 (293-346)||(9423748-9423802)
chr4 (247-348)||(21067476-21067577)
chr4 (272-340)||(3169408-3169476)
chr4 (251-319)||(23091358-23091426)
chr4 (265-337)||(17628716-17628788)
chr4 (289-348)||(21067925-21067985)
chr4 (289-348)||(27578795-27578855)
chr4 (247-338)||(51331128-51331218)
chr4 (317-348)||(12691914-12691945)
chr4 (287-341)||(40607132-40607187)
chr4 (247-348)||(14351989-14352090)
chr4 (289-338)||(23942675-23942725)
chr4 (285-319)||(27026726-27026760)
chr4 (308-348)||(50814730-50814771)
chr4 (272-348)||(53854717-53854793)
chr4 (247-287)||(10668386-10668426)
chr4 (247-287)||(10668892-10668932)
chr4 (247-287)||(10882531-10882571)
[»] scaffold0020 (1 HSPs)
scaffold0020 (247-348)||(107314-107415)
[»] scaffold0389 (1 HSPs)
scaffold0389 (247-339)||(13384-13476)
[»] scaffold0022 (5 HSPs)
scaffold0022 (250-348)||(162531-162630)
scaffold0022 (247-348)||(162985-163086)
scaffold0022 (247-348)||(163265-163366)
scaffold0022 (247-337)||(69666-69756)
scaffold0022 (247-299)||(162483-162534)
[»] scaffold0168 (1 HSPs)
scaffold0168 (247-348)||(2936-3037)
[»] scaffold0018 (1 HSPs)
scaffold0018 (246-348)||(10493-10595)
[»] scaffold1519 (1 HSPs)
scaffold1519 (247-348)||(1552-1653)
[»] scaffold0499 (1 HSPs)
scaffold0499 (247-348)||(1902-2003)
[»] scaffold0277 (1 HSPs)
scaffold0277 (247-348)||(14553-14654)
[»] scaffold0024 (1 HSPs)
scaffold0024 (247-348)||(105914-106015)
[»] scaffold0002 (2 HSPs)
scaffold0002 (247-341)||(154503-154597)
scaffold0002 (250-348)||(154951-155049)
[»] scaffold0217 (1 HSPs)
scaffold0217 (247-348)||(504-605)
[»] scaffold0005 (2 HSPs)
scaffold0005 (255-348)||(245276-245369)
scaffold0005 (260-348)||(245742-245830)
[»] scaffold0040 (1 HSPs)
scaffold0040 (247-348)||(2061-2162)
[»] scaffold0333 (3 HSPs)
scaffold0333 (247-346)||(5216-5315)
scaffold0333 (247-348)||(4754-4855)
scaffold0333 (289-344)||(5320-5377)
[»] scaffold0557 (1 HSPs)
scaffold0557 (247-341)||(2297-2391)
[»] scaffold0442 (1 HSPs)
scaffold0442 (249-317)||(1-68)
[»] scaffold0065 (2 HSPs)
scaffold0065 (264-319)||(62975-63029)
scaffold0065 (247-315)||(67214-67281)
[»] scaffold0047 (2 HSPs)
scaffold0047 (292-341)||(17493-17543)
scaffold0047 (289-341)||(18027-18080)
[»] scaffold0126 (1 HSPs)
scaffold0126 (289-339)||(37205-37256)


Alignment Details
Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 1118225 - 1117999
Alignment:
Q  19 attctaacatttagaaaggatcaatcatcgagctttgtgctctttgattattaagtggtagacttaatcagaaaaacacaaaccatcaactataggttat 118  Q
    |||||||||||||||||||||| |||||||||||| || |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1118225 attctaacatttagaaaggatcgatcatcgagcttcgtcctctgtgattattaagtggtagacttaatcggaaaaacacaaaccatcaactataggttat 1118126  T
Q  119 taatccgtgactcaatttgtgttcaaaggaaaatgaagctactgtgagtcgaacaatgatgatgatagggggaatatgacaaaaccgaaacaacatgatt 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  1118125 taatccgtgactcaatttgtgttcaaaggaaaatgaagctactgtgagtcgaacaatgatgatgata-tcggaatatgacaaaaccgaaacaacatgatt 1118027  T
Q  219 ttgagttcaaaagaatgccagtgcaacc 246  Q
    |||||||||||| |||||||||||||||    
T  1118026 ttgagttcaaaaaaatgccagtgcaacc 1117999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 14820449 - 14820348
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  14820449 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctcacttgcatgcttaccgggaa 14820351  T
Q  346 act 348  Q
    |||    
T  14820350 act 14820348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 28562040 - 28561939
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||||| ||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28562040 tgtaacatctcatactgctttcaagattaccgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 28561942  T
Q  346 act 348  Q
    |||    
T  28561941 act 28561939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 16811674 - 16811575
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgtttgtcctcactcgcacgcttaccgggaaa 346  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  16811674 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgt-tttgtcctcactcgcatgcttatcgggaaa 16811577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 14814244 - 14814144
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  14814244 tgtaacatcccagactgctttcagtattgccgactaacccc-acaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacgcttaccgggaa 14814146  T
Q  346 ac 347  Q
    ||    
T  14814145 ac 14814144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 8067576 - 8067474
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccggga 344  Q
    ||||||||||||| |||||||| ||||||||||| ||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  8067576 ctgtaacatcccagactgcttttaggattgccgattgacctc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttatcggga 8067478  T
Q  345 aact 348  Q
    ||||    
T  8067477 aact 8067474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 13150405 - 13150506
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||||||||||| |||| ||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  13150405 tgtaacatcccagactgctttcagcattgtcgactgacccc-acaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaa 13150503  T
Q  346 act 348  Q
    |||    
T  13150504 act 13150506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 39653459 - 39653358
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||| || |||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  39653459 tgtaacatcccagactgcttttagcattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaa 39653361  T
Q  346 act 348  Q
    |||    
T  39653360 act 39653358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 50348041 - 50347940
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||    
T  50348041 tgtaacatcccagactgctttcagcattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttatcgggaa 50347943  T
Q  346 act 348  Q
    |||    
T  50347942 act 50347940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 249 - 347
Target Start/End: Original strand, 11179887 - 11179985
Alignment:
Q  249 taacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaac 347  Q
    |||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||    
T  11179887 taacatcccagactgctttcagcattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacacttaccgggaaac 11179985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 16811220 - 16811119
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgt-gtttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| | ||||||||||||||||||| || |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||| |||||    
T  16811220 tgtaacatcccagattgctttcaggattgccgaccga-ccccacaaaccaacacgaatcttttcagcgtattttgtcctcactcgcacgcttacggggaa 16811122  T
Q  346 act 348  Q
    |||    
T  16811121 act 16811119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 247 - 339
Target Start/End: Complemental strand, 41473836 - 41473744
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttac 339  Q
    ||||||||| ||||||||||||| ||||| ||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  41473836 tgtaacatctcatactgctttcacgattggcgactgacccc-acaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgcttac 41473744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 255 - 348
Target Start/End: Original strand, 27187188 - 27187282
Alignment:
Q  255 cccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg--tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||| |||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||    
T  27187188 cccagactgttttcagaattgccgactgacccc-acaaaccaacacgagtcttttcagcgtgtttttgtcctcactcgcacgcttatcgggaaact 27187282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 13149953 - 13150051
Alignment:
Q  250 aacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||    
T  13149953 aacatcccagactgctttcagcattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcacttgcacacttaccgagaaact 13150051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 32227072 - 32227173
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||||||  ||| ||| ||||||||||||| |||||||||||    
T  32227072 tgtaacatcccagactgctttcagcattgtcgactga-ccccacaaaccaacacgagtcttttcaatgtgttttttcctcactcgcacacttaccgggaa 32227170  T
Q  346 act 348  Q
    |||    
T  32227171 act 32227173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 247 - 337
Target Start/End: Original strand, 31284127 - 31284217
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctt 337  Q
    |||||||||||| | |||||||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||||||||    
T  31284127 tgtaacatcccagattgctttcatgattgccgactgacccc-acaaaccaacacgagtcttttcggcgtgttttgtccccactcgcacgctt 31284217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 260 - 340
Target Start/End: Original strand, 32386598 - 32386678
Alignment:
Q  260 actgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttacc 340  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  32386598 actgctttcaagattgccgactgacccc-acaaaccaacacgagtctttttagcgtgttttgtcctcactcggacgcttacc 32386678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 32227796 - 32227694
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccggga 344  Q
    ||||||||||||| ||||||||||| |||| ||||||| ||| |||||||||||||||||||||||  ||| ||| ||||||||||||| |||| |||||    
T  32227796 ctgtaacatcccagactgctttcagcattgtcgactga-ccctacaaaccaacacgagtcttttcaatgtgttttttcctcactcgcacacttatcggga 32227698  T
Q  345 aact 348  Q
    ||||    
T  32227697 aact 32227694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 345
Target Start/End: Complemental strand, 37045328 - 37045229
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccggga 344  Q
    ||||||||||||| ||  |||| || |||| ||||||||||  |||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||    
T  37045328 ctgtaacatcccagacgactttaagcattgtcgactgaccct-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttatcggga 37045230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 25248407 - 25248305
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtctttt-cagcgtgttt-gtcctcactcgcacgcttaccggga 344  Q
    |||||||||||| |||||||| ||||||| ||||| ||| | ||||| ||||||||||||||| || ||||||| |||||||||||||||||||||| ||    
T  25248407 tgtaacatcccagactgcttttaggattgtcgactaacctc-acaaatcaacacgagtctttttcaacgtgttttgtcctcactcgcacgcttaccgtga 25248309  T
Q  345 aact 348  Q
    ||||    
T  25248308 aact 25248305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 247 - 339
Target Start/End: Original strand, 25238978 - 25239070
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttac 339  Q
    ||||||||| |||||  |||| || |||| ||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  25238978 tgtaacatctcatacgactttaagcattgtcgactgaccct-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttac 25239070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 346
Target Start/End: Original strand, 20884968 - 20885067
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||| || ||||| |||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||    
T  20884968 tgtaacatcccaaacgactttaagcattgcagactgaccct-acaaaccaacacgagtcttttcagcgtgttttgtcctaacttgcacgcttaacgggaa 20885066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 341
Target Start/End: Complemental strand, 2911338 - 2911285
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccg 341  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  2911338 acaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccg 2911285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 25230597 - 25230657
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  25230597 acaaaccaacacgagtctttccagcgtgttttgatctcactcgcacgcttaccgggaaact 25230657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 25238184 - 25238244
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  25238184 acaaaccaacacgagtctttccagcgtgttttgatctcactcgcacgcttaccgggaaact 25238244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 25238576 - 25238628
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttacc 340  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  25238576 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttacc 25238628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 340
Target Start/End: Original strand, 4067236 - 4067304
Alignment:
Q  272 attgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttacc 340  Q
    |||||||||||||||  ||||||||||||  |||||||||||||| |||||||||||| |||||||||||    
T  4067236 attgccgactgaccct-acaaaccaacactggtcttttcagcgtgttttgtcctcacttgcacgcttacc 4067304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 348
Target Start/End: Complemental strand, 30529939 - 30529880
Alignment:
Q  290 caaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||| |||||| ||||||||    
T  30529939 caaaccaacacaagtctttttagcgtgttttgtcctcactcgcatgcttactgggaaact 30529880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 25230099 - 25230200
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaa 345  Q
    ||||||||| || ||  |||| || |||| ||||||||||  |||||||||||| ||||||| || ||||||| |||||||||||| |||||||||| ||    
T  25230099 tgtaacatctcaaacgactttaagcattgtcgactgaccct-acaaaccaacactagtctttccaacgtgttttgtcctcactcgctcgcttaccggaaa 25230197  T
Q  346 act 348  Q
    |||    
T  25230198 act 25230200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 25237686 - 25237787
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaa 345  Q
    ||||||||| || ||  |||| || |||| ||||||||||  |||||||||||| ||||||| || ||||||| |||||||||||| |||||||||| ||    
T  25237686 tgtaacatctcaaacgactttaagcattgtcgactgaccct-acaaaccaacactagtctttccaacgtgttttgtcctcactcgctcgcttaccggaaa 25237784  T
Q  346 act 348  Q
    |||    
T  25237785 act 25237787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 25230989 - 25231030
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactc 329  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  25230989 acaaaccaacacgagtcttttcagcgtgttttgtcctcactc 25231030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 346
Target Start/End: Complemental strand, 7477486 - 7477387
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||| | ||  |||| || |||| ||||||||||| ||| ||||||| ||||||||||| |||| ||||| ||||||||||||||| ||| |||    
T  7477486 tgtaacatcctagacgactttaagaattgtcgactgacccc-acataccaacatgagtcttttcaacgtgctttgttctcactcgcacgctttccgagaa 7477388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 346
Target Start/End: Complemental strand, 7494176 - 7494077
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||| | ||  |||| || |||| ||||||||||| ||| ||||||| ||||||||||| |||| ||||| |||||||||||||||  ||||||    
T  7494176 tgtaacatcctagacgactttaagaattgtcgactgacccc-acataccaacatgagtcttttcaacgtgctttgttctcactcgcacgctttacgggaa 7494078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 337
Target Start/End: Complemental strand, 18318950 - 18318860
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctt 337  Q
    ||||||||| || ||  ||||| |||||||||| || |||  |||||||||| ||| ||||||||||||| ||||| |||||||||||||||    
T  18318950 tgtaacatcacagacgactttctggattgccgattgtccca-acaaaccaacccgaatcttttcagcgtgttttgttctcactcgcacgctt 18318860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 337
Target Start/End: Original strand, 53150672 - 53150753
Alignment:
Q  256 ccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctt 337  Q
    ||||||| || |||||||||  |||||||||| |||||| |||| ||||||||||| | || ||||||||||||||| |||||    
T  53150672 ccatactactgtcaggattgttgactgacccc-acaaactaacatgagtcttttcaacatgttttgtcctcactcgcccgctt 53150753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 3900095 - 3900032
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttca 311  Q
    |||||||||||||||   |||||| ||||| |||||| ||||||| | |||||||||||||||||    
T  3900095 tgtaacatcccataccattttcagaattgctgactga-ccccacagatcaacacgagtcttttca 3900032  T

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Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 22548400 - 22548501
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  22548400 tgtaacatcccatactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaa 22548498  T
Q  346 act 348  Q
    |||    
T  22548499 act 22548501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 32292236 - 32292135
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32292236 tgtaacatcccagactgctttcaggattgccgactga-ccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 32292138  T
Q  346 act 348  Q
    |||    
T  32292137 act 32292135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 22026675 - 22026573
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg--tttgtcctcactcgcacgcttaccggga 344  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  22026675 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagtgtgtttttgtcctcactcgcacgcttaccggga 22026577  T
Q  345 aact 348  Q
    ||||    
T  22026576 aact 22026573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 22548846 - 22548947
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||    
T  22548846 tgtaacatcccatactgctttcaggattgccgactga-ccccacaaaccaacacgagtctgttcagcgtgttttatcctcactcgcacgcttactgggaa 22548944  T
Q  346 act 348  Q
    |||    
T  22548945 act 22548947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 34308330 - 34308431
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  34308330 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccagcacgagtcttttcagcgtgttttgtcctcactcacatgcttaccgggaa 34308428  T
Q  346 act 348  Q
    |||    
T  34308429 act 34308431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 34308786 - 34308887
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  34308786 tgtaacatcccagactgctttcaggattgctgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcacatgcttaccgggaa 34308884  T
Q  346 act 348  Q
    |||    
T  34308885 act 34308887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 17103377 - 17103276
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||| ||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17103377 tgtaacatcccagacgacttttaggattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 17103279  T
Q  346 act 348  Q
    |||    
T  17103278 act 17103276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 247 - 342
Target Start/End: Original strand, 21315961 - 21316056
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgg 342  Q
    |||||||||||| |||||||| ||||||| ||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21315961 tgtaacatcccagactgcttttaggattgtcgattgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgg 21316056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 247 - 340
Target Start/End: Original strand, 27022190 - 27022283
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttacc 340  Q
    |||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  27022190 tgtaacatcccagactgcttttaggattgtcgactgacccc-acaaaccaacacgagtctttttagcgtgttttgtcctcactcgcacgcttacc 27022283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 12100982 - 12100884
Alignment:
Q  250 aacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||||||  ||||||| |||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||    
T  12100982 aacatcccatacgactttcagcattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacgaggaaact 12100884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 25147830 - 25147730
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||| || | |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| |||||||||||||||| | ||||    
T  25147830 tgtaacacccaagactgctttcaggattgccgactgaccc--acaaaccaacacgagtcttttcagcgtgttttgtactcactcgcacgcttatcaggaa 25147733  T
Q  346 act 348  Q
    |||    
T  25147732 act 25147730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 263 - 348
Target Start/End: Original strand, 41658972 - 41659057
Alignment:
Q  263 gctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||    
T  41658972 gctttcagcattgccgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttacagggaaact 41659057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 247 - 334
Target Start/End: Complemental strand, 25148261 - 25148174
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacg 334  Q
    ||||||||| ||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||    
T  25148261 tgtaacatctcatactgcttttaggattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgacctcactcgcacg 25148174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 12827105 - 12827206
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||| |  ||| |||  |||||||||||| |||||||||||    
T  12827105 tgtaacatcccagactgctttcaggattgtcgactga-ccccacaaaccaacacgagtcttttaaaagtgttttaacctcactcgcacacttaccgggaa 12827203  T
Q  346 act 348  Q
    |||    
T  12827204 act 12827206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 31283503 - 31283604
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  ||||||  |||| ||||||||||| ||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||    
T  31283503 tgtaacatcccagacgactttcaacattgtcgactgacccc-acaaaccaacacgagtcttttcaacgcgttttgtcctcactcgcacgcttaccgggaa 31283601  T
Q  346 act 348  Q
    |||    
T  31283602 act 31283604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 32292699 - 32292591
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgaccccc------acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttac 339  Q
    |||||||||||| |||||||| ||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  32292699 tgtaacatcccagactgcttttaggattgccgactgaccctacaaagtacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttac 32292600  T
Q  340 cgggaaact 348  Q
    ||| |||||    
T  32292599 cggaaaact 32292591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 10844466 - 10844567
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||| ||||||| ||||||||||  |||||| ||||||||||||||||||||| |||||||||||||||| |||||||| |||    
T  10844466 tgtaacatcccagacgacttttaggattgtcgactgaccct-acaaacaaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttaccgagaa 10844564  T
Q  346 act 348  Q
    |||    
T  10844565 act 10844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 27926193 - 27926092
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||| || |||| ||||||||||  ||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||    
T  27926193 tgtaacatcccagacgactttaagcattgtcgactgaccct-acaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacacttaccgggaa 27926095  T
Q  346 act 348  Q
    |||    
T  27926094 act 27926092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 8080234 - 8080294
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  8080234 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgagaaact 8080294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 2044354 - 2044252
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccggga 344  Q
    ||||||||||||| ||  |||| || ||||  |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |    
T  2044354 ctgtaacatcccaaacgactttaagcattggtgactgaccct-acaaaccaatacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaa 2044256  T
Q  345 aact 348  Q
    ||||    
T  2044255 aact 2044252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 247 - 341
Target Start/End: Original strand, 6463394 - 6463489
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccg 341  Q
    |||||||||| | ||  |||| || |||| ||||||||||  | |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6463394 tgtaacatcctagacgactttaagcattgtcgactgaccctaaaaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 6463489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 30527374 - 30527431
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  30527374 acaaatcaacacgagtcttttcagcgtgttttatcctcactcgcacgcttaccgggaa 30527431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 27021840 - 27021903
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttca 311  Q
    ||||||||| ||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||    
T  27021840 tgtaacatctcatactgttttcaggattgccgactga-cttcacaaaccaacacgagtcttttca 27021903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 329
Target Start/End: Complemental strand, 9251180 - 9251098
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactc 329  Q
    |||||||||  | |||||||||||||||| ||| ||||||| |||||||||||| ||| ||||||||||| |||||||||||||    
T  9251180 tgtaacatcatagactgctttcaggattgtcgattgacccc-acaaaccaacacaagttttttcagcgtgttttgtcctcactc 9251098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 330
Target Start/End: Complemental strand, 6466549 - 6466468
Alignment:
Q  249 taacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcg 330  Q
    |||||||||| ||  ||||||| ||||||||||| |||| |||||||||||| |||||||| |||||| ||||||||||||||    
T  6466549 taacatcccagacgactttcagtattgccgactggcccc-acaaaccaacacaagtctttttagcgtgctttgtcctcactcg 6466468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 337
Target Start/End: Complemental strand, 25308042 - 25307969
Alignment:
Q  264 ctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgt-gtttgtcctcactcgcacgctt 337  Q
    |||| ||||||||||||||| ||| | ||| |||||||||||||||||||||  |||||||||||||||||||||    
T  25308042 cttttaggattgccgactgatccc-ataaatcaacacgagtcttttcagcgtactttgtcctcactcgcacgctt 25307969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 15818892 - 15818968
Alignment:
Q  272 attgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||||| |||| |||||||||||| ||||||||||| ||| ||||||||||||||||| |||  |||||||||    
T  15818892 attgccgactggcccc-acaaaccaacacaagtcttttcagtgtgctttgtcctcactcgcacacttttcgggaaact 15818968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 22705424 - 22705369
Alignment:
Q  294 ccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||| || |||||    
T  22705424 ccaacacgagtcttttcagcgtgttttgtcctcactggcacgcttactggaaaact 22705369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 29117514 - 29117444
Alignment:
Q  264 ctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacg 334  Q
    ||||||||||| ||||| |||||  ||||||||||||||||||||||||  || ||||||||||||||||||    
T  29117514 ctttcaggattaccgaccgaccct-acaaaccaacacgagtcttttcaggatgatttgtcctcactcgcacg 29117444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 3744900 - 3744862
Alignment:
Q  281 tgacccccacaaaccaacacgagtcttttcagcgtgttt 319  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  3744900 tgacccccacaaaccaacacgagtcttttcagtgtgttt 3744862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 337
Target Start/End: Original strand, 27819112 - 27819187
Alignment:
Q  260 actgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgtttgtcctcactcgcacgctt 337  Q
    |||||||| ||||||| ||||||||||| |||| | |||||| |||||||||| ||| |||||||||||| |||||||    
T  27819112 actgcttttaggattgtcgactgacccc-acaatc-aacacgggtcttttcagtgtgcttgtcctcactcacacgctt 27819187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 10729870 - 10729828
Alignment:
Q  296 aacacgagtcttttcagcgtg-tttgtcctcactcgcacgctt 337  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  10729870 aacacgagtcttttcagcgtgctttgtccacactcgcacgctt 10729828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 33852150 - 33852200
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgctta 338  Q
    ||||| ||||| ||||||||| ||||||||| |||||||||||||||||||    
T  33852150 acaaatcaacatgagtctttttagcgtgttttgtcctcactcgcacgctta 33852200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 332
Target Start/End: Complemental strand, 28453628 - 28453548
Alignment:
Q  252 catcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgca 332  Q
    ||||||| |||||||| ||||||| ||||||| |   |||||| ||||||| |||||||||| ||||| |||||||||||||    
T  28453628 catcccagactgcttttaggattgtcgactgatctt-acaaacaaacacgactcttttcagcatgttttgtcctcactcgca 28453548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 12119225 - 12119273
Alignment:
Q  285 ccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgca 332  Q
    |||||||||||||||||||| ||||||  ||| ||||||||||||||||    
T  12119225 ccccacaaaccaacacgagtattttcaatgtgctttgtcctcactcgca 12119273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 20850616 - 20850515
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20850616 tgtaacaccccatactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 20850518  T
Q  346 act 348  Q
    |||    
T  20850517 act 20850515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 17027382 - 17027483
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  17027382 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaa 17027480  T
Q  346 act 348  Q
    |||    
T  17027481 act 17027483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 9352357 - 9352256
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||    
T  9352357 tgtaacgtcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccgagaa 9352259  T
Q  346 act 348  Q
    |||    
T  9352258 act 9352256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 23986167 - 23986269
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgt-ttgtcctcactcgcacgcttaccggga 344  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||| || ||||||||||||||||| ||| ||    
T  23986167 ctgtaacatcccatactgctttcagaattgccgactga-ccccacaaaccaacacaagtcttttcagcgtgtcttctcctcactcgcacgctttccgtga 23986265  T
Q  345 aact 348  Q
    ||||    
T  23986266 aact 23986269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 247 - 341
Target Start/End: Complemental strand, 7912173 - 7912079
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccg 341  Q
    |||||||||||| |||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||    
T  7912173 tgtaacatcccagactgctttcaggattgtcgactga-ccccacaaaccaacacaagtcttttcagcgtgttttgtcctcactcgcatgcttaccg 7912079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 13191363 - 13191465
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgt-gtttgtcctcactcgcacgcttaccggga 344  Q
    |||||||| |||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||    
T  13191363 ctgtaacaccccagactgctttcaagattgccgactga-ccccacaaaccaacacgagtcttttcagtgtattttgtcctcactcgcacgcttatcggga 13191461  T
Q  345 aact 348  Q
    ||||    
T  13191462 aact 13191465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 13492628 - 13492526
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg--tttgtcctcactcgcacgcttaccggga 344  Q
    ||||||| || | |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  13492628 tgtaacaccctagactgctttcaagattgccgactgacccc-acaaaccaacacgagtcttttcagcgtgtttttttcctcactcgcacgcttactggga 13492530  T
Q  345 aact 348  Q
    ||||    
T  13492529 aact 13492526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 2681070 - 2681172
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccggga 344  Q
    ||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| |||||||||||| ||||||||||  |||    
T  2681070 ctgtaacatcccagacagctttcaggattgccgactga-ccccacaaaccaacacgagtcttctcaacgtgttttgtcctcacttgcacgcttactagga 2681168  T
Q  345 aact 348  Q
    ||||    
T  2681169 aact 2681172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 7912602 - 7912504
Alignment:
Q  250 aacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||| | |||||||||||||||||||| ||||| ||||||||||| |||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  7912602 aacatcccagattgctttcaggattgccgactaacccc-acaaaccaacatgagtcttttcagcgtgttttgtcctcactcgtacgcttaacgggaaact 7912504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 247 - 346
Target Start/End: Original strand, 20896538 - 20896638
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg--tttgtcctcactcgcacgcttaccggga 344  Q
    |||||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||||||| |||  ||| ||||||||||||| ||||||||||    
T  20896538 tgtaacatcccagactgctttcaagattgccggctgacccc-acaaaccaacacgagtcttttcagtgtgtttttctcctcactcgcacacttaccggga 20896636  T
Q  345 aa 346  Q
    ||    
T  20896637 aa 20896638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 23776735 - 23776634
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| | |||||||||||||||| ||||||||||||| |||||| ||||||||||| ||||  ||||    
T  23776735 tgtaacatcccagactgctttcaggattgccgactga-ctccacaaaccaacacgaatcttttcagcgtgttttgtcgtcactcgcacgtttactaggaa 23776637  T
Q  346 act 348  Q
    |||    
T  23776636 act 23776634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 13493085 - 13492983
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt--gtcctcactcgcacgcttaccggga 344  Q
    ||||||| |||| ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||     
T  13493085 tgtaacaccccagactgctttcaggattgctgactgaccct-acaaatcaacacgagtcttttcagcatgtttttgtcctcactcgcacgcttaccgggt 13492987  T
Q  345 aact 348  Q
    ||||    
T  13492986 aact 13492983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 272 - 342
Target Start/End: Original strand, 2891170 - 2891240
Alignment:
Q  272 attgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgg 342  Q
    |||||||||||||||  |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  2891170 attgccgactgaccct-acaaaccaacacgaatcttttcagcgtgttttgtcctcactcgcacgcttaccgg 2891240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 2890715 - 2890791
Alignment:
Q  272 attgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaaact 348  Q
    |||| ||||||||||  ||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||    
T  2890715 attgtcgactgaccct-acaaaccaacacgagtctttttagcgtgttttgtcctcactcgcacgcttatcgggaaact 2890791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 9440708 - 9440775
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgt 315  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||||||| ||||||| ||||||||||    
T  9440708 tgtaacatcccagactgctttcaagattgccgactga-ccccacaaaccagcacgagttttttcagcgt 9440775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 20126074 - 20126134
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||    
T  20126074 acaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcacgcttactgggaaact 20126134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 247 - 337
Target Start/End: Complemental strand, 15929434 - 15929344
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgt-gtttgtcctcactcgcacgctt 337  Q
    |||||||||||| |||||||| ||||||||||| ||| ||||||||| |||||| |||||||| |||||  ||||||||||||| |||||||    
T  15929434 tgtaacatcccagactgctttaaggattgccgagtga-ccccacaaatcaacacaagtctttttagcgtattttgtcctcactcacacgctt 15929344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 17730980 - 17731054
Alignment:
Q  267 tcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccg 341  Q
    ||||||||| ||||||||||  ||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  17730980 tcaggattgtcgactgaccct-acaaaccaacacgagtctttttagcgtgttttgtcctcacttgcacgcttaccg 17731054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 340
Target Start/End: Complemental strand, 28780405 - 28780312
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttacc 340  Q
    |||||||||||| ||||||||||| |||| || |||||||| |||||||||||||||||||||||   || ||| ||||||||||||| ||||||    
T  28780405 tgtaacatcccagactgctttcagcattgtcggctgacccc-acaaaccaacacgagtcttttcaaaatgttttatcctcactcgcacacttacc 28780312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 6331219 - 6331290
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt 319  Q
    ||||||||| || |||||||||| ||||||||||||| ||| |||||||||||||||||||| |||| |||||    
T  6331219 tgtaacatctcagactgctttcaagattgccgactga-ccctacaaaccaacacgagtctttccagcatgttt 6331290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 11062083 - 11062029
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgg 342  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  11062083 acaaaccaacacgagtttttttagcgtgttttgtcctcactcgcacgcttaccgg 11062029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 2720439 - 2720515
Alignment:
Q  272 attgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||||||   |||||| ||||||||||| ||||||||||| || |||||||||||||||| |||||||||    
T  2720439 attgccgactgaccctg-caaaccgacacgagtcttctcagcgtgttttgttctcactcgcacgcttatcgggaaact 2720515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 3652777 - 3652720
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaa 345  Q
    ||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||||||    
T  3652777 acaaaccaacaagagtcttttcagctttttttgtcctcactcgcacgcttaccgggaa 3652720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 27334364 - 27334305
Alignment:
Q  271 gattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcg 330  Q
    ||||| ||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||    
T  27334364 gattgtcgactgacccc-acaaatcaacacgagtcttttcagcgtgttttgtcctcactcg 27334305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 27395104 - 27395045
Alignment:
Q  271 gattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcg 330  Q
    ||||| ||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||    
T  27395104 gattgtcgactgacccc-acaaatcaacacgagtcttttcagcgtgttttgtcctcactcg 27395045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 21311810 - 21311710
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||| || |||| ||| ||||||  ||||||||||||||||| || ||||||| |||||| |||||||||| |||||||| ||    
T  21311810 tgtaacatcccagacgactttaagcattgtcgattgaccct-acaaaccaacacgagtccttacagcgtgttttgtcttcactcgcacacttaccggaaa 21311712  T
Q  346 ac 347  Q
    ||    
T  21311711 ac 21311710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 28583246 - 28583158
Alignment:
Q  260 actgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||  ||||||||||||||||| |||||| |||| ||||||||||||  || ||||||| ||||| ||||||| | ||||||||    
T  28583246 actgctttcgagattgccgactgacccc-acaaactaacatgagtcttttcagtatgttttgtccccactcacacgctttctgggaaact 28583158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 348
Target Start/End: Complemental strand, 20735984 - 20735889
Alignment:
Q  253 atcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||| |||||||||||||||||| | ||||| ||||||||||| || | |||||||| |||||| |||||||||| | ||| |||| || |||||||    
T  20735984 atcctatactgctttcaggattgtcaactga-ccccacaaaccgacgcaagtctttttagcgtgttttgtcctcaattgcatgctttcctggaaact 20735889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 337
Target Start/End: Complemental strand, 20732872 - 20732783
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctt 337  Q
    ||||||||| |||| ||||||||||||||| || ||| |||||||||||||||| |  |||||||| ||| ||| |||||||||||| ||||    
T  20732872 tgtaacatcacataatgctttcaggattgctgaatga-ccccacaaaccaacac-aaacttttcagtgtgttttttcctcactcgcaagctt 20732783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 31415965 - 31416026
Alignment:
Q  272 attgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacg 334  Q
    |||||||||||| ||| |||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  31415965 attgccgactgatccc-acaaaccaacacga-tcttttcagcgtgttttgtcctcactcacacg 31416026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 21312266 - 21312165
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||| || |||| ||||||||||  |||||||||||| ||||||||||  ||| |||||| |||||  ||| |||||||||||    
T  21312266 tgtaacatcccagacgactttaagcattgtcgactgaccct-acaaaccaacaccagtcttttcaatgtgttttgtcttcacttacacacttaccgggaa 21312168  T
Q  346 act 348  Q
    |||    
T  21312167 act 21312165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 21557364 - 21557412
Alignment:
Q  262 tgctttcaggattgccgactgacccccacaaaccaacacgagtcttttca 311  Q
    |||||| |||||| |||||| ||||||| |||||||||||||||||||||    
T  21557364 tgcttttaggattaccgacttaccccca-aaaccaacacgagtcttttca 21557412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 3653168 - 3653096
Alignment:
Q  272 attgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||| ||||||  ||||||||| |||||||||||||||||| ||||||    |||||||||||| |||||||||    
T  3653168 attgccgattgaccct-acaaaccaatacgagtcttttcagcgtgttttgtc----ctcgcacgcttatcgggaaact 3653096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 20054387 - 20054488
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20054387 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 20054485  T
Q  346 act 348  Q
    |||    
T  20054486 act 20054488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 20054843 - 20054944
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20054843 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 20054941  T
Q  346 act 348  Q
    |||    
T  20054942 act 20054944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 20055299 - 20055400
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20055299 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 20055397  T
Q  346 act 348  Q
    |||    
T  20055398 act 20055400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 20055755 - 20055856
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20055755 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 20055853  T
Q  346 act 348  Q
    |||    
T  20055854 act 20055856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 20056211 - 20056312
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20056211 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 20056309  T
Q  346 act 348  Q
    |||    
T  20056310 act 20056312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 20056667 - 20056768
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20056667 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 20056765  T
Q  346 act 348  Q
    |||    
T  20056766 act 20056768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 20057114 - 20057215
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20057114 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 20057212  T
Q  346 act 348  Q
    |||    
T  20057213 act 20057215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 20057570 - 20057671
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20057570 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 20057668  T
Q  346 act 348  Q
    |||    
T  20057669 act 20057671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 50002926 - 50003027
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  50002926 tgtaacatcccagactgctttcaggattgctgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 50003024  T
Q  346 act 348  Q
    |||    
T  50003025 act 50003027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 38341202 - 38341100
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccggga 344  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  38341202 ctgtaacatcccagactgctttcaggattgccgactga-ccccataaaccaacacgagtcttttccgcgtgttttgtcctcactcgcacgcttaccggga 38341104  T
Q  345 aact 348  Q
    ||||    
T  38341103 aact 38341100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 20845512 - 20845613
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||||| || |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20845512 tgtaacatctcagactgctttcaagattgccgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 20845610  T
Q  346 act 348  Q
    |||    
T  20845611 act 20845613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 46693586 - 46693687
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||    
T  46693586 tgtaacatcccaaactgctttcaggattgtcgactga-ccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgcataccgggaa 46693684  T
Q  346 act 348  Q
    |||    
T  46693685 act 46693687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 52250501 - 52250400
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  52250501 tgtaacatcccagactgctttcagcattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaa 52250403  T
Q  346 act 348  Q
    |||    
T  52250402 act 52250400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 20060190 - 20060292
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccggga 344  Q
    |||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||| || |||| |||||||||||||||||||||||||| |    
T  20060190 ctgtaacaccccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtctttccatcgtgttttgtcctcactcgcacgcttaccggaa 20060288  T
Q  345 aact 348  Q
    ||||    
T  20060289 aact 20060292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 340
Target Start/End: Original strand, 20053931 - 20054024
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttacc 340  Q
    |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  20053931 tgtaacatcccagactgctttcaggattgtcgactga-ccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttacc 20054024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 52250838 - 52250737
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||    
T  52250838 tgtaacatcccagactgctttcagcattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacacttaccgggaa 52250740  T
Q  346 act 348  Q
    |||    
T  52250739 act 52250737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 52251175 - 52251074
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||    
T  52251175 tgtaacatcccagactgctttcagcattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacacttaccgggaa 52251077  T
Q  346 act 348  Q
    |||    
T  52251076 act 52251074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 247 - 338
Target Start/End: Original strand, 16451784 - 16451875
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctta 338  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||    
T  16451784 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcatcacgcgcacgctta 16451875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 247 - 338
Target Start/End: Original strand, 16460937 - 16461028
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctta 338  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||    
T  16460937 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcatcacgcgcacgctta 16461028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 50002558 - 50002659
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||| | ||  |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  50002558 tgtaacatcctagacgactttcaggattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggga 50002656  T
Q  346 act 348  Q
    |||    
T  50002657 act 50002659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 35759915 - 35760003
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgc 335  Q
    |||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  35759915 tgtaacatcccagactgctttcatgattgccgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcgctcgcacgc 35760003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 247 - 341
Target Start/End: Original strand, 35759459 - 35759553
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccg 341  Q
    ||||||| |||| ||| |||||| ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35759459 tgtaacaccccagactactttcatgattgccgactgaccccaa-aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 35759553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 341
Target Start/End: Original strand, 51372732 - 51372819
Alignment:
Q  254 tcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagc-gtgtttgtcctcactcgcacgcttaccg 341  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  51372732 tcccatactgctttcaagattgccgattgacccc-acaaaccaacacgagtcttttcagcggattttgtcctcactcgcacgcttaccg 51372819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 31822970 - 31823071
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| | ||||||| ||||||| |||||||||| ||||| ||||||||||||||||||| || |||||||||||||||| |||||||| |||    
T  31822970 tgtaacatcccagaatgctttctggattgctgactgacccc-acaaatcaacacgagtcttttcagcatgttttgtcctcactcgcatgcttaccgagaa 31823068  T
Q  346 act 348  Q
    |||    
T  31823069 act 31823071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 247 - 329
Target Start/End: Original strand, 49996531 - 49996613
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactc 329  Q
    ||||||||| || |||||||| ||||||||||||||| |||||||||| |||| |||||||||||||||| |||||||||||||    
T  49996531 tgtaacatctcagactgcttttaggattgccgactga-ccccacaaactaacaagagtcttttcagcgtgttttgtcctcactc 49996613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 28181350 - 28181415
Alignment:
Q  253 atcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt 319  Q
    ||||||||||||||||||||||| | |||| || |||||||||||||||||||||||||| ||||||    
T  28181350 atcccatactgctttcaggattgtcaactg-cctccacaaaccaacacgagtcttttcagagtgttt 28181415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 43056941 - 43057017
Alignment:
Q  272 attgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||||||  |||||||||||| ||| ||||||| |||||| ||||||||||||| |||||||||||||||    
T  43056941 attgccgactgaccct-acaaaccaacacaagttttttcagtgtgttttgtcctcactcgcatgcttaccgggaaact 43057017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 247 - 330
Target Start/End: Complemental strand, 39582636 - 39582553
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcg 330  Q
    |||||||||||| ||| |||| || |||||||||||| ||  ||||||||| ||||||||| |||||||| ||||||||||||||    
T  39582636 tgtaacatcccaaactactttaagcattgccgactgatcct-acaaaccaaaacgagtcttctcagcgtgttttgtcctcactcg 39582553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 308
Target Start/End: Complemental strand, 16907530 - 16907470
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttt 308  Q
    ||||||||||||| ||||||| |||||||  | |||||||| ||||||||||||||||||||    
T  16907530 tgtaacatcccatgctgctttaaggattgttggctgacccc-acaaaccaacacgagtcttt 16907470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 43057415 - 43057475
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||| |||||||| |||||| ||||| ||||||| || |||||||||||||||    
T  43057415 acaaaccaacacaagtctttttagcgtgttttgttctcactcacatgcttaccgggaaact 43057475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 19261 - 19160
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  19261 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaa 19163  T
Q  346 act 348  Q
    |||    
T  19162 act 19160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 8e-37; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 8641886 - 8641987
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  8641886 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgagaa 8641984  T
Q  346 act 348  Q
    |||    
T  8641985 act 8641987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 34371907 - 34371806
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  34371907 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgggaa 34371809  T
Q  346 act 348  Q
    |||    
T  34371808 act 34371806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 248 - 344
Target Start/End: Complemental strand, 2474243 - 2474147
Alignment:
Q  248 gtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccggga 344  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2474243 gtaacatcccatactgcttttaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggga 2474147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 3886452 - 3886553
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  3886452 tgtaacatcccagaatgctttcaggattgccgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaa 3886550  T
Q  346 act 348  Q
    |||    
T  3886551 act 3886553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 3886908 - 3887009
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  3886908 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttgtcagcgtgttttgtcctcactcgcacgcttactgggaa 3887006  T
Q  346 act 348  Q
    |||    
T  3887007 act 3887009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 15512863 - 15512964
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgt-gtttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||    
T  15512863 tgtaatatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcaacgtattttgtcctcactcgcacgcttaccgggaa 15512961  T
Q  346 act 348  Q
    |||    
T  15512962 act 15512964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 189364 - 189262
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccggga 344  Q
    ||||||||||||| ||| ||||||||||||| |||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  189364 ctgtaacatcccagactactttcaggattgcggactgatccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccggga 189266  T
Q  345 aact 348  Q
    ||||    
T  189265 aact 189262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 2474700 - 2474599
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||| ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  2474700 tgtaacgtcccagactgcttttaggattgccgactgacccc-acaaaccaacacgagtcttttcagcgtgttttttcctcactcgcatgcttaccgggaa 2474602  T
Q  346 act 348  Q
    |||    
T  2474601 act 2474599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 245 - 348
Target Start/End: Original strand, 17445304 - 17445407
Alignment:
Q  245 cctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccggg 343  Q
    ||||||||||||||  |  |||| ||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17445304 cctgtaacatcccaggcgacttttaggattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggg 17445402  T
Q  344 aaact 348  Q
    |||||    
T  17445403 aaact 17445407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 42788497 - 42788598
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||| ||||||| | ||||||||||||||| |||||||||||||| |||||||||||||||| |||||||| |||    
T  42788497 tgtaacatcccagactgctttcaggattgtcgactga-ctccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcaagcttaccgagaa 42788595  T
Q  346 act 348  Q
    |||    
T  42788596 act 42788598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 247 - 342
Target Start/End: Complemental strand, 2194099 - 2194004
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgg 342  Q
    |||||||||||| ||||||||||| |||| ||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  2194099 tgtaacatcccagactgctttcagcattgtcgactgacccc-acaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacacttaccgg 2194004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 22557265 - 22557163
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtctttt-cagcgtgttt-gtcctcactcgcacgcttaccggga 344  Q
    |||||||||||| ||  | |||||||||| ||||||||||  ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  22557265 tgtaacatcccagacgacattcaggattgtcgactgaccct-acaaaccaacacgagtcttttacagcgtgttttgtcctcactcgcacgcttaccggga 22557167  T
Q  345 aact 348  Q
    ||||    
T  22557166 aact 22557163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 34372363 - 34372262
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||| ||| |||||||||||||||||||||||| | ||| |||||||||||||| ||||||||||| ||| |||||||||||||||||| ||| ||    
T  34372363 tgtaacattccagactgctttcaggattgccgactga-cgccataaaccaacacgagtattttcagcgtgttttttcctcactcgcacgcttatcggaaa 34372265  T
Q  346 act 348  Q
    |||    
T  34372264 act 34372262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 247 - 342
Target Start/End: Complemental strand, 34868073 - 34867978
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgg 342  Q
    |||||||||||| ||||||||||||||||||||| ||  |||||||| ||||||||||||||| |||||| |||||||| ||| |||||||||||||    
T  34868073 tgtaacatcccagactgctttcaggattgccgacgga-tcccacaaatcaacacgagtctttttagcgtgttttgtccttacttgcacgcttaccgg 34867978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 247 - 337
Target Start/End: Original strand, 30684862 - 30684952
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctt 337  Q
    ||||||||| || |||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| || ||||||||    
T  30684862 tgtaacatctcaaactgctttcaagattgccgattgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcgcttgcacgctt 30684952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 249 - 319
Target Start/End: Original strand, 21883938 - 21884007
Alignment:
Q  249 taacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt 319  Q
    |||||||||| |||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  21883938 taacatcccagactgctttcaagattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttt 21884007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 20039367 - 20039427
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20039367 acaaaccaacatgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaact 20039427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 22556832 - 22556730
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtctttt-cagcgtgttt-gtcctcactcgcacgcttaccggga 344  Q
    |||||||||||| ||  | || ||||||| ||||||||||  ||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||    
T  22556832 tgtaacatcccagacgacattaaggattgtcgactgaccct-acaaaccaacacgagtcttttacagcgtgttttgtcctcactcgcacgcttaccgaga 22556734  T
Q  345 aact 348  Q
    ||||    
T  22556733 aact 22556730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 247 - 337
Target Start/End: Original strand, 30720111 - 30720201
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctt 337  Q
    |||||||||||| |||||||||| ||||| ||| |||| || ||||||||||| |||||||||||||||| ||||||||| |||||||||||    
T  30720111 tgtaacatcccagactgctttcaagattgtcgattgactcc-acaaaccaacaggagtcttttcagcgtgttttgtcctcgctcgcacgctt 30720201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 348
Target Start/End: Complemental strand, 187810 - 187752
Alignment:
Q  291 aaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  187810 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaact 187752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 29679983 - 29680059
Alignment:
Q  272 attgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||||||  |||||||||||||||||||||||||||| |||||||||| | ||||||||| |||||||||    
T  29679983 attgccgactgaccct-acaaaccaacacgagtcttttcagcgtgttttgtcctcatttgcacgcttatcgggaaact 29680059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 1822160 - 1822100
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||    
T  1822160 acaaaccaacacgagtcttttcagcgtgttttgtcctcattcacacgcttaccgggaaact 1822100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 249 - 341
Target Start/End: Original strand, 10927256 - 10927348
Alignment:
Q  249 taacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccg 341  Q
    |||||||||||||  ||||  |||||| |||| |||||  |||||||||||||||||||||||||||| |||||||||| || |||||||||||    
T  10927256 taacatcccatacgtcttttgggattgtcgaccgaccct-acaaaccaacacgagtcttttcagcgtgttttgtcctcattcacacgcttaccg 10927348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 340
Target Start/End: Complemental strand, 1880330 - 1880278
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttacc 340  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  1880330 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgctcgcttacc 1880278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 20858392 - 20858483
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctt 337  Q
    ||||||||||||| ||| |||||||||||| ||||||| ||  ||||| |||||||||| ||||||||||| |||||||||||| ||| ||||    
T  20858392 ctgtaacatcccaaacttctttcaggattgtcgactga-cctaacaaatcaacacgagtattttcagcgtgttttgtcctcactagcatgctt 20858483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 333
Target Start/End: Original strand, 18750047 - 18750133
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcac 333  Q
    |||||||||||||||  |||| || ||||  |||||||||| |||||||||| ||||||||||||| ||| |||||||||||||||||    
T  18750047 tgtaacatcccatacgactttaagtattgttgactgacccc-acaaaccaactcgagtcttttcagtgtgttttgtcctcactcgcac 18750133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 341
Target Start/End: Original strand, 11757145 - 11757226
Alignment:
Q  260 actgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccg 341  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||||||| ||||  ||| |||||||||| |||||||||||    
T  11757145 actgcttttaggattgccgactga-ccccgcaaaccaacaagagtcttttaagcggatttcgtcctcactcacacgcttaccg 11757226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 348
Target Start/End: Original strand, 24182114 - 24182198
Alignment:
Q  264 ctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||| ||||| ||||| |||||||||||||| |||||||| |||| ||| ||||||||||||| ||| ||| ||||||    
T  24182114 ctttcaggattgtcgactaacccc-acaaaccaacacgaatcttttcaacgtgttttatcctcactcgcacactttccgagaaact 24182198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 2058508 - 2058572
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttca 311  Q
    ||||||||| || |||||||||||||||| | | |||||||||||||| ||||||||| ||||||    
T  2058508 tgtaacatctcaaactgctttcaggattgtctattgacccccacaaactaacacgagttttttca 2058572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 8391210 - 8391274
Alignment:
Q  285 ccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||||||||| ||| || ||||||    
T  8391210 ccccacaaatcaacacgagtcttctcagcgtgttttgtcctcactcgcacgtttatcgagaaact 8391274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 27646727 - 27646787
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| |||  ||||||||    
T  27646727 acaaaccaacatgagtcttttcagcatgttttgtcctcactcgcacgtttattgggaaact 27646787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 348
Target Start/End: Original strand, 21886067 - 21886098
Alignment:
Q  317 tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||||||||||||||||||||||||||    
T  21886067 tttgtcctcactcgcacgcttaccgggaaact 21886098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 339
Target Start/End: Complemental strand, 39147227 - 39147135
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttac 339  Q
    |||||||||||| ||  |||| || |||||||| ||||||  ||||||||||| ||||||||  ||||| ||| |||||| |||||||||||||    
T  39147227 tgtaacatcccagacgactttaagcattgccgattgaccct-acaaaccaacatgagtctttctagcgttttttgtcctctctcgcacgcttac 39147135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 348
Target Start/End: Original strand, 38063725 - 38063780
Alignment:
Q  293 accaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||| |||||||||| ||| ||||||| ||||||||||||||| |||||    
T  38063725 accaacacgagt-ttttcagcgtattttgtcctcattcgcacgcttaccggaaaact 38063780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 8e-37; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 32377758 - 32377859
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  32377758 tgtaacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaa 32377856  T
Q  346 act 348  Q
    |||    
T  32377857 act 32377859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 30966985 - 30966884
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||    
T  30966985 tgtaacatcccagactgctttcaggattgccgactga-ctccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgagaa 30966887  T
Q  346 act 348  Q
    |||    
T  30966886 act 30966884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 30966527 - 30966428
Alignment:
Q  249 taacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaac 347  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||| |||||    
T  30966527 taacatcccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgcttaccgagaaac 30966429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 246 - 345
Target Start/End: Complemental strand, 33175252 - 33175153
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccggga 344  Q
    ||||||||||||| |||||||||||||||||||||||| ||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  33175252 ctgtaacatcccagactgctttcaggattgccgactga-ccctacaaactaacacgagtctttccagcgtgttttgtcctcactcgcacgcttaccggga 33175154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 25337848 - 25337949
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||||| || ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  25337848 tgtaacatctcagactgctttcagcattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaa 25337946  T
Q  346 act 348  Q
    |||    
T  25337947 act 25337949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 24818621 - 24818519
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccggga 344  Q
    ||||||||||||  ||| ||||||| |||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  24818621 ctgtaacatccccgactactttcagcattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccagga 24818523  T
Q  345 aact 348  Q
    ||||    
T  24818522 aact 24818519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 255 - 348
Target Start/End: Original strand, 32377575 - 32377668
Alignment:
Q  255 cccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||| |||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  32377575 cccagactgcttttaggattgccgactgacccc-acaaaccaacacgagttttttcagcgtgttttgtcctcactcgcacgcttaccggaaaact 32377668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 33771296 - 33771195
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| | ||||||||| ||||||| |||||||| |||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||    
T  33771296 tgtaacatcccagattgctttcagaattgccggctgacccc-acaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcatgcttaccgggaa 33771198  T
Q  346 act 348  Q
    |||    
T  33771197 act 33771195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 5399668 - 5399769
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||| ||||||| ||||||| |||||||||||||||| ||||||| ||||||| ||||| |||||||||||||||||||| ||    
T  5399668 tgtaacatcccagactgcttttaggattgtcgactga-ccccacaaaccaacacaagtctttccagcgtgttttgttctcactcgcacgcttaccggaaa 5399766  T
Q  346 act 348  Q
    |||    
T  5399767 act 5399769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 1912819 - 1912718
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||| || ||||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||    
T  1912819 tgtaacatcccagacgactttaagcattgccgactgactct-acaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgagaa 1912721  T
Q  346 act 348  Q
    |||    
T  1912720 act 1912718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 16379232 - 16379131
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||| ||| ||  |||| || |||| ||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  16379232 tgtaacattccaaacaactttaagcattgtcgactgaccct-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacccggaa 16379134  T
Q  346 act 348  Q
    |||    
T  16379133 act 16379131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 29804942 - 29804869
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgtttgt 321  Q
    |||||||||||| ||||||||||| |||| ||||||| ||| |||||||||||||||||||||||||||||||||    
T  29804942 tgtaacatcccagactgctttcagcattgtcgactgatccc-acaaaccaacacgagtcttttcagcgtgtttgt 29804869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 29259509 - 29259572
Alignment:
Q  286 cccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||    
T  29259509 cccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgcttaccgggaaact 29259572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 15640029 - 15639928
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||| || |||||||||||||||  || ||||||||||||||||||| |||||||| ||||||||||||||||||| || |||    
T  15640029 tgtaacatcccagacgactttaagcattgccgactgaccct-accaaccaacacgagtcttttctgcgtgttttgtcctcactcgcacgcttatcgagaa 15639931  T
Q  346 act 348  Q
    |||    
T  15639930 act 15639928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 30963114 - 30963215
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgt-gtttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||| | |||||||||| ||||||||| ||||| | ||||||||||||||||||||||| |||  ||| ||||||||||||||||| ||| |||    
T  30963114 tgtaacatccaaaactgctttcatgattgccgattgacctc-acaaaccaacacgagtcttttcaacgtattttatcctcactcgcacgctttccgagaa 30963212  T
Q  346 act 348  Q
    |||    
T  30963213 act 30963215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 16379647 - 16379587
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||    
T  16379647 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacagtgaaact 16379587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 292 - 348
Target Start/End: Complemental strand, 15620149 - 15620092
Alignment:
Q  292 aaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||    
T  15620149 aaccaacacgagtcttttcagcgagttttgtcctcactcgcacgcttaccgagaaact 15620092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 20502234 - 20502172
Alignment:
Q  272 attgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacg 334  Q
    |||||||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  20502234 attgccgactgaccct-acaaactaacacgagtcttttcagcgtgttttgtcctcactcgcacg 20502172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 340
Target Start/End: Original strand, 25433906 - 25434000
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttacc 340  Q
    ||||||||||||| |   |||| || |||||||||||||||  |||||||||||||| ||||||||||||| |||||||| |||| ||||||||||    
T  25433906 ctgtaacatcccagatgactttaagcattgccgactgaccct-acaaaccaacacgaatcttttcagcgtgttttgtccttactcacacgcttacc 25434000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 336
Target Start/End: Original strand, 36924373 - 36924421
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgct 336  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  36924373 acaaaccaacacgagtctttccagcgtgttttgtcctcactcgcacgct 36924421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 1707337 - 1707235
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccggga 344  Q
    ||||||||||||| ||  |||| || |||||||||||||||  | ||| |||| ||| |||||| ||||||||| ||  |||||||||||||||||||||    
T  1707337 ctgtaacatcccagacgactttaagcattgccgactgaccct-ataaatcaacgcgaatctttttagcgtgttttgtattcactcgcacgcttaccggga 1707239  T
Q  345 aact 348  Q
    ||||    
T  1707238 aact 1707235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 348
Target Start/End: Original strand, 8181254 - 8181313
Alignment:
Q  290 caaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| ||| ||| |||||    
T  8181254 caaaccaacacgagtcttttcagcgtgttttgtcctcacttgcacgtttatcggaaaact 8181313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 337
Target Start/End: Original strand, 30961751 - 30961824
Alignment:
Q  264 ctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgctt 337  Q
    |||||| ||||||||| ||||||| |||||| ||||| ||||||||||  |||||| ||||||||||||||||||    
T  30961751 ctttcatgattgccgattgacccc-acaaactaacacaagtcttttcactgtgttttgtcctcactcgcacgctt 30961824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 348
Target Start/End: Complemental strand, 11389761 - 11389677
Alignment:
Q  264 ctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||| ||||||| ||||||||||| ||||||||||| |||| |||||||| || ||| | |||||||||| ||||||| |||||||    
T  11389761 cttttaggattgtcgactgacccc-acaaaccaacatgagttttttcagcatgttttattctcactcgcatgcttaccaggaaact 11389677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 348
Target Start/End: Complemental strand, 11406422 - 11406338
Alignment:
Q  264 ctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||| ||||||| ||||||||||| ||||||||||| |||| |||||||| || ||| | |||||||||| ||||||| |||||||    
T  11406422 cttttaggattgtcgactgacccc-acaaaccaacatgagttttttcagcatgttttattctcactcgcatgcttaccaggaaact 11406338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 333
Target Start/End: Complemental strand, 83313 - 83226
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcac 333  Q
    |||||||||| || ||| |||||| ||||||||| | ||||| |||||||||||  |||||| ||| |||| |||||||||||||||||    
T  83313 ctgtaacatctcagactactttcatgattgccgaataacccc-acaaaccaacataagtcttatcaacgtgttttgtcctcactcgcac 83226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 348
Target Start/End: Complemental strand, 8256776 - 8256720
Alignment:
Q  293 accaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||||| ||| |||||    
T  8256776 accaacatgagtcttttcagcgtattttgtcctcactcgcacgcttatcggaaaact 8256720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 332
Target Start/End: Original strand, 26865119 - 26865189
Alignment:
Q  262 tgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgca 332  Q
    |||||| |||||| |||| ||||||| |||||||||||||  |||||||||| || ||||||||||||||||    
T  26865119 tgcttttaggatttccgaatgacccc-acaaaccaacacggatcttttcagcatgctttgtcctcactcgca 26865189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 334
Target Start/End: Original strand, 18875873 - 18875923
Alignment:
Q  285 ccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacg 334  Q
    ||||||||||||||||| |||||| ||| ||| ||||||||||||||||||    
T  18875873 ccccacaaaccaacacgtgtctttacagtgtgttttgtcctcactcgcacg 18875923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 318
Target Start/End: Complemental strand, 1952974 - 1952926
Alignment:
Q  269 aggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgtt 318  Q
    |||| |||||||||||||| ||||||||||||| ||||||| ||||||||    
T  1952974 aggagtgccgactgacccc-acaaaccaacacgggtctttttagcgtgtt 1952926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 30963609 - 30963658
Alignment:
Q  286 cccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacg 334  Q
    |||||||||||| |||||||||||||  ||| ||||||||||||||||||    
T  30963609 cccacaaaccaaaacgagtcttttcactgtgttttgtcctcactcgcacg 30963658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 319
Target Start/End: Complemental strand, 13191269 - 13191198
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt 319  Q
    ||||||||||||||   |||||| ||||| ||||||| | ||| |||||||||| |||||||| |||||||||    
T  13191269 tgtaacatcccatatgactttcaagattgtcgactga-ctccataaaccaacactagtctttttagcgtgttt 13191198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 1515 - 1414
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||| |||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1515 tgtaacatcccagactgctttcaggattgtcgactgacgcc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 1417  T
Q  346 act 348  Q
    |||    
T  1416 act 1414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 28496149 - 28496048
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28496149 tgtaacattccaaactgttttcaggattgccgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 28496051  T
Q  346 act 348  Q
    |||    
T  28496050 act 28496048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 2193551 - 2193450
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  2193551 tgtaacatctcagactgctttcaggattgccgactga-ccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaa 2193453  T
Q  346 act 348  Q
    |||    
T  2193452 act 2193450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 9125254 - 9125153
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||    
T  9125254 tgtaacaccccagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccggaaa 9125156  T
Q  346 act 348  Q
    |||    
T  9125155 act 9125153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 36422546 - 36422445
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  36422546 tgtaacatcccagactgctttcagcattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaa 36422448  T
Q  346 act 348  Q
    |||    
T  36422447 act 36422445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 43233252 - 43233151
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||| |||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  43233252 tgtagcatcccaatctgctttcaggattgccgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaa 43233154  T
Q  346 act 348  Q
    |||    
T  43233153 act 43233151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 255 - 348
Target Start/End: Original strand, 13122363 - 13122457
Alignment:
Q  255 cccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg--tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  13122363 cccagactgctttcaggattgccgattgacccc-acaaaccaacacgagtcttttcagcgtgtttttgtcctcactcgcacgcttaccgggaaact 13122457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 2941608 - 2941709
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||  ||||||||||||||| | |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  2941608 tgtaacatcccagactgctttcgtgattgccgactgaccgc-acaaaccaacacgagtcttttcagcgtgttttctcctcactcgcacgcttaccgggaa 2941706  T
Q  346 act 348  Q
    |||    
T  2941707 act 2941709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 7646329 - 7646430
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||    
T  7646329 tgtaacatcccagactgctttcagcattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgagaa 7646427  T
Q  346 act 348  Q
    |||    
T  7646428 act 7646430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 248 - 348
Target Start/End: Complemental strand, 2189438 - 2189338
Alignment:
Q  248 gtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaa 346  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||| ||||||||||||| |||||||| ||||||||||||| ||||||||||||||||    
T  2189438 gtaacatcccagactgctttcaggattgccgactg-tccccacaaatcaacacgagtcttctcagcgtgttttgtcctcactcacacgcttaccgggaaa 2189340  T
Q  347 ct 348  Q
    ||    
T  2189339 ct 2189338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 255 - 348
Target Start/End: Original strand, 13124994 - 13125088
Alignment:
Q  255 cccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg--tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||  ||||||||||||||||||||||| ||||||||    
T  13124994 cccagactgctttcaggattgccgactgacccc-acaaaccaacacgagtcctttcagcgtgtttttgtcctcactcgcacgcttactgggaaact 13125088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 28495469 - 28495560
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctt 337  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  28495469 ctgtaacatcgcagactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgggttttgtcctcactcgcacgctt 28495560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 18833581 - 18833480
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||| |||| |||||||||||||||||||||| | ||| ||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  18833581 tgtaacaccccagactgctttcaggattgccgacttatccc-acaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccgggaa 18833483  T
Q  346 act 348  Q
    |||    
T  18833482 act 18833480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 42515821 - 42515744
Alignment:
Q  265 tttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgg 342  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42515821 tttcaagattgccgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgg 42515744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 247 - 346
Target Start/End: Original strand, 6718926 - 6719025
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||| |||||||| |||||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  6718926 tgtaacatcccagacgacttttaggattgctgactgacccc-acaaaccaacacgattcttttcagtgtgttttgtcctcactcgcacgcttaccgggaa 6719024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 34405441 - 34405543
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccggga 344  Q
    ||||||||||| | ||  |||| ||||||| ||||||||||| ||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  34405441 ctgtaacatcctagacaacttttaggattgtcgactgacccc-acaaatcaacacgggtcttttcagcgtgttttgtcctcactcgcacgcttaccggga 34405539  T
Q  345 aact 348  Q
    ||||    
T  34405540 aact 34405543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 29038871 - 29038972
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||| || |||||||||||||||  |||||||||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  29038871 tgtaacatcccagacgactttaagcattgccgactgaccct-acaaaccaacacgagtcttttcagcgtgttttgtcctcagtcacacgcttaccgggaa 29038969  T
Q  346 act 348  Q
    |||    
T  29038970 act 29038972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 7646710 - 7646609
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||| ||||||| ||||| ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| ||    
T  7646710 tgtaacatcccagacgacttttaggattgtcgactaacccc-acaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcacgcttatcggaaa 7646612  T
Q  346 act 348  Q
    |||    
T  7646611 act 7646609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 247 - 341
Target Start/End: Complemental strand, 42515387 - 42515293
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccg 341  Q
    ||||||||| || ||  |||| || |||||||||||||||  |||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  42515387 tgtaacatcacagacgactttaagcattgccgactgaccct-acaaaccaacacgagtcttttcagcgtgttttgtcctcacccgcacgcttaccg 42515293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 341
Target Start/End: Original strand, 6747952 - 6748021
Alignment:
Q  272 attgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccg 341  Q
    |||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  6747952 attgccgactgaccct-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccg 6748021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 36422677 - 36422576
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| | | |||| || |||| ||||||||||| ||||| |||||||||||||||||| ||| ||||||||||||||||| ||| |||||||    
T  36422677 tgtaacatcccagattacttttagcattgtcgactgacccc-acaaatcaacacgagtcttttcagtgtgttttgtcctcactcgcacacttgccgggaa 36422579  T
Q  346 act 348  Q
    |||    
T  36422578 act 36422576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 2611509 - 2611601
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctta 338  Q
    ||||||||| ||||||  |||| || |||| ||||||||||  |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  2611509 ctgtaacattccatacgactttaagcattgtcgactgaccct-acaaaccaacacgagtcttttcagagtgttttgtcctcactcgcacgctta 2611601  T

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Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 43776380 - 43776321
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtctt 307  Q
    |||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||    
T  43776380 tgtaacatcccagactgctttcaggattgccgact-aaccccacaaaccaacacgagtctt 43776321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 2466219 - 2466120
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccggga 344  Q
    ||||||||||||| ||  |||| || |||| |||||||||   |||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  2466219 ctgtaacatcccagacgactttaagcattgtcgactgacct--acaaactaacacgagtcttttcagcgtgttttgtcctcacttgcatgcttaccggga 2466122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 332
Target Start/End: Original strand, 6747457 - 6747542
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgca 332  Q
    |||||||||||| |||||||| || |||||||||||| ||| |||||||||||| |||||||||| | || ||||||||||||||||    
T  6747457 tgtaacatcccagactgctttaagcattgccgactga-ccctacaaaccaacacaagtcttttcaacttgttttgtcctcactcgca 6747542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 43776178 - 43776242
Alignment:
Q  285 ccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| || |||||    
T  43776178 ccccacaaaccaacacgagtcttttcagcgtgttttgtcttcattcgcacgcttactggaaaact 43776242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 337
Target Start/End: Original strand, 31406452 - 31406530
Alignment:
Q  261 ctgctttcaggattgccgactgac-ccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctt 337  Q
    |||||||||||||| ||||||||| ||| ||||||||||||  ||||||||||| || ||||||||||||| |||||||    
T  31406452 ctgctttcaggattaccgactgacaccctacaaaccaacacatgtcttttcagcatgttttgtcctcactcacacgctt 31406530  T

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Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 22529111 - 22529187
Alignment:
Q  272 attgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaaact 348  Q
    |||| ||||||||||  ||||||||||| ||||||||||||||| ||| |||||||||| ||||||||||| ||||||    
T  22529111 attgtcgactgaccct-acaaaccaacatgagtcttttcagcgtattttgtcctcactcacacgcttaccgagaaact 22529187  T

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Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 26419104 - 26419168
Alignment:
Q  265 tttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactc 329  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||| | || |||||||||||||    
T  26419104 tttcaggattgtcgactgacccc-acaaaccaacacgagtcttttcaacatgttttgtcctcactc 26419168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 3305240 - 3305300
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||| |||||| |||||||    
T  3305240 acaaatcaacacgagtcttttcagcgtgttttgttctcactcgcactcttaccaggaaact 3305300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 35474013 - 35474071
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaa 346  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||| ||||||| ||||    
T  35474013 acaaaccaacacaagtcatttcagcgtgttttgtcctcactcgcacacttaccgagaaa 35474071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 29357348 - 29357397
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctt 337  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  29357348 acaaaccaacacgagtcttttcaacgtgctttgttctcactcgcacgctt 29357397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 334
Target Start/End: Original strand, 31743740 - 31743827
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacg 334  Q
    |||||||||||| ||  |||| || |||| ||||| ||||  ||||||||||||||||||||||||||||  ||| |||||||||||||    
T  31743740 tgtaacatcccaaacgactttaagcattgtcgactaaccct-acaaaccaacacgagtcttttcagcgtgcgttgacctcactcgcacg 31743827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 266 - 328
Target Start/End: Complemental strand, 11372719 - 11372657
Alignment:
Q  266 ttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcact 328  Q
    ||||||||||| || ||||||  ||||||||||||||||||||||||| || ||||||||||||    
T  11372719 ttcaggattgctgagtgaccct-acaaaccaacacgagtcttttcagcatgttttgtcctcact 11372657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 680071 - 680010
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg--tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||||| ||||||||||||||||  ||||| |||||||||| | |||||| ||||||    
T  680071 acaaaccaacatgagtcttttcagcgtgtttttgttctcactcgcatgtttaccgcgaaact 680010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 334
Target Start/End: Original strand, 5406449 - 5406525
Alignment:
Q  258 atactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacg 334  Q
    |||||||||| ||||||||| | || || | ||| |||||||||||| ||||||| ||| ||||||||||||||||||    
T  5406449 atactgctttaaggattgccaattgtcctc-acagaccaacacgagtgttttcagtgtgttttgtcctcactcgcacg 5406525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 7461271 - 7461304
Alignment:
Q  286 cccacaaaccaacacgagtcttttcagcgtgttt 319  Q
    |||||||| |||||||||||||||||||||||||    
T  7461271 cccacaaatcaacacgagtcttttcagcgtgttt 7461304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 18833678 - 18833642
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactga 283  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  18833678 tgtaacaccccagactgctttcaggattgccgactga 18833642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 334
Target Start/End: Original strand, 36015320 - 36015407
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgt-gtttgtcctcactcgcacg 334  Q
    ||||||||| |||| || ||| ||||||||||||| | | | |||||| |||||||||||||| |||||  ||||||||||||| ||||    
T  36015320 tgtaacatctcatattgtttttaggattgccgact-aactctacaaactaacacgagtctttttagcgtattttgtcctcactcacacg 36015407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 7e-34; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 35477955 - 35477855
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||| |||    
T  35477955 tgtaacatcccatactgctttcaggattgccgactga-ccccacaaaccaacacgagtcttttcagcgtgttttgtcctctctcgcacgtttaccgagaa 35477857  T
Q  346 ac 347  Q
    ||    
T  35477856 ac 35477855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 4127263 - 4127364
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||| | | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  4127263 tgtaacattctaaactgctttcaggattgccgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaa 4127361  T
Q  346 act 348  Q
    |||    
T  4127362 act 4127364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 247 - 343
Target Start/End: Original strand, 24629281 - 24629377
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccggg 343  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24629281 tgtaacatcacagactgctttcaggattgccgactga-ccccacaaactaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggg 24629377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 7678466 - 7678568
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccggga 344  Q
    ||||||||||||| ||||||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  7678466 ctgtaacatcccagactgctttcagcattgtcgactgacccc-acaaacctacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccggga 7678564  T
Q  345 aact 348  Q
    ||||    
T  7678565 aact 7678568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 49998931 - 49998830
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||| |||| ||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  49998931 tgtaacaccccaaactgctttcagaattgccgactgtcccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaa 49998833  T
Q  346 act 348  Q
    |||    
T  49998832 act 49998830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 247 - 346
Target Start/End: Original strand, 15268018 - 15268117
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||| || | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||    
T  15268018 tgtaacagccgagactgctttcaggattgccgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgagaa 15268116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 262 - 348
Target Start/End: Complemental strand, 35871907 - 35871821
Alignment:
Q  262 tgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  35871907 tgctttcaggattgccgactgatccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccgggaaact 35871821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 247 - 345
Target Start/End: Original strand, 50398839 - 50398937
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||| || |||| |||||||||||| ||||| ||||||||||    
T  50398839 tgtaacatcccagactgctttcaggattgccgactga-ccctacaaaccaacacgagtctttccaacgtgttttgtcctcacttgcacgtttaccgggaa 50398937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 7381562 - 7381461
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||||||  |||| || |||||||||||||||  ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||    
T  7381562 tgtaacatcccatacgactttaagcattgccgactgaccct-acaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaa 7381464  T
Q  346 act 348  Q
    |||    
T  7381463 act 7381461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 255 - 348
Target Start/End: Original strand, 14572007 - 14572100
Alignment:
Q  255 cccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||| ||||||||||||| ||||||| ||| ||||||    
T  14572007 cccatactgctttcaggattgccgactga-ccccgcaaaccaacacgagtcttttcaccgtgttttgtcctcactcacacgctttccgagaaact 14572100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 23350128 - 23350229
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||| |||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||| ||||||||| | |||    
T  23350128 tgtaacaccccagactgctttcagaattgccgactgacccc-acaaaccaacacgagtcttttcagtgtgttttgtcctcactcacacgcttacagagaa 23350226  T
Q  346 act 348  Q
    |||    
T  23350227 act 23350229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 23943087 - 23943188
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||| || |||| ||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23943087 tgtaacatcccagacgactttaagcattgtcgactgaccct-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 23943185  T
Q  346 act 348  Q
    |||    
T  23943186 act 23943188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 50398383 - 50398484
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgt-gtttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||||| || |||||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||  |||||||||||||||||||||||||| ||    
T  50398383 tgtaacatctcagactgctttcaggattgccgactga-ccctacaaaccaacacgagtctttccagtgtattttgtcctcactcgcacgcttaccggtaa 50398481  T
Q  346 act 348  Q
    |||    
T  50398482 act 50398484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 4127739 - 4127835
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||| ||||||||||      |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||    
T  4127739 tgtaacatcccagactgctttcaagattgccgac------ccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccggaaa 4127832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 247 - 333
Target Start/End: Complemental strand, 13266381 - 13266295
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcac 333  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||| | || ||| |||||||||||||    
T  13266381 tgtaacatcccatactgctttcaggattgtcgactga-ccccacaaaccaacacaagtcttttcaacatgttttctcctcactcgcac 13266295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 339
Target Start/End: Original strand, 1645594 - 1645686
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttac 339  Q
    |||||||||||||||  |||| || |||||| ||||||||  ||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  1645594 tgtaacatcccatacgactttaagcattgccaactgaccct-acaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttac 1645686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 14571546 - 14571634
Alignment:
Q  260 actgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||| ||||||||||||| ||| ||| ||| ||||||    
T  14571546 actgctttcaggattcccgactgacccc-acaaaccaacacgagtcttttcaacgtgttttgtcctcactcacacactttccgagaaact 14571634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 44470761 - 44470821
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  44470761 acaaaccaacacgagtctttccagcgtgttttgtcctcactcgcacgcttaccgggaaact 44470821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 347
Target Start/End: Original strand, 4414238 - 4414332
Alignment:
Q  253 atcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaac 347  Q
    |||||||||  |||| || |||||||||||||||  |||||||||||||||||||||||| ||| |||||||| ||||||||||||||| ||||||    
T  4414238 atcccatacgactttaagcattgccgactgaccct-acaaaccaacacgagtcttttcagtgtgttttgtcctgactcgcacgcttaccaggaaac 4414332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 50399400 - 50399334
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagc 313  Q
    |||||||||| || |||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  50399400 ctgtaacatcgcagactgctttcaggattgccgactga-ccctacaaaccaacacgagtcttttcagc 50399334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 27578134 - 27578232
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||| ||||||||||| ||||||    || |||| ||||||||||||||||||||||| |||||||||||||||||| || | |||||    
T  27578134 tgtaacatcccagactcctttcaggattaccgact----cctacaacccaacacgagtcttttcagcgtgttttgtcctcactcgcacgttttcagggaa 27578229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 319
Target Start/End: Complemental strand, 13265931 - 13265860
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt 319  Q
    ||||||||| || ||||||||||||||| |||||||||| | |||||| ||||||||||||||||||||||||    
T  13265931 tgtaacatctcagactgctttcaggattaccgactgaccgc-acaaactaacacgagtcttttcagcgtgttt 13265860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 247 - 337
Target Start/End: Complemental strand, 5810129 - 5810039
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctt 337  Q
    ||||||||| |||||| |||| ||||||||||||| ||||| ||||| ||||| |||||||||||||||| ||| ||||||||| |||||||    
T  5810129 tgtaacatctcatacttcttttaggattgccgactaacccc-acaaatcaacatgagtcttttcagcgtgttttatcctcactcacacgctt 5810039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 31816983 - 31817084
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||||||| || ||||||||| ||| || |||| |||||||| |||||||||||||| | || |||||||||||||| |||||| | |||||    
T  31816983 tgtaacatcccatactactatcaggattgtcgattggcccc-acaaaccagcacgagtcttttcaacatgttttgtcctcactcgtacgctttctgggaa 31817081  T
Q  346 act 348  Q
    |||    
T  31817082 act 31817084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 8467695 - 8467759
Alignment:
Q  285 ccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||| |||| ||| ||||||    
T  8467695 ccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgctttccgagaaact 8467759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 337
Target Start/End: Original strand, 27578317 - 27578392
Alignment:
Q  262 tgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctt 337  Q
    ||||||||||||||  |||||| ||| |||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  27578317 tgctttcaggattgttgactgatccc-acaaaccatcacgagtcttttctgcgtgttttgtcctcactcgcacgctt 27578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 346
Target Start/End: Original strand, 44471170 - 44471269
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaa 345  Q
    ||||||| |||| ||  |||| || |||| ||||||||||  |||||||||||||||||||| |||| ||||| |||||||||||| |||||||||||||    
T  44471170 tgtaacaccccaaacgactttaagaattgtcgactgaccct-acaaaccaacacgagtctttccagcatgttttgtcctcactcgcccgcttaccgggaa 44471268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 9423748 - 9423802
Alignment:
Q  293 accaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaa 346  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  9423748 accaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttaacgggaaa 9423802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 21067577 - 21067476
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||| || ||||  |||||||||  |||||| ||||||||||||||||| |||||| |||| ||||||||||||||||| |||    
T  21067577 tgtaacatcccagacgactttaagcattgtggactgaccca-acaaactaacacgagtcttttcagtgtgttttgtccccactcgcacgcttaccgagaa 21067479  T
Q  346 act 348  Q
    |||    
T  21067478 act 21067476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 340
Target Start/End: Complemental strand, 3169476 - 3169408
Alignment:
Q  272 attgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttacc 340  Q
    |||||| ||||||||  |||||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  3169476 attgccaactgaccct-acaaaccaacacgagtattttcaacgtgttttgtcctcactcgcacgcttacc 3169408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 23091358 - 23091426
Alignment:
Q  251 acatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt 319  Q
    |||| ||| |||||||||||| ||||||||||||||||| |||| ||||| ||| |||| |||||||||    
T  23091358 acataccaaactgctttcagggttgccgactgacccccataaactaacactagtttttttagcgtgttt 23091426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 337
Target Start/End: Complemental strand, 17628788 - 17628716
Alignment:
Q  265 tttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctt 337  Q
    ||||||||||||||||||| | ||||| |||||||| ||||||| ||| ||| ||||||||||||| |||||||    
T  17628788 tttcaggattgccgactga-ctccacataccaacacaagtctttccagtgtgttttgtcctcactcacacgctt 17628716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 21067985 - 21067925
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||||| | ||||||| |||||| ||||||||||||||| ||||||| |||||    
T  21067985 acaaaccaacacgaattttttcagtgtgttttgtcctcactcgcacgtttaccggtaaact 21067925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 27578795 - 27578855
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||| |||||| |||||||||||| || ||||||||||||||||||||| | ||||||||    
T  27578795 acaaatcaacacaagtcttttcagcatgatttgtcctcactcgcacgctttctgggaaact 27578855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 338
Target Start/End: Original strand, 51331128 - 51331218
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgctta 338  Q
    |||||||||| | ||| |||| ||||||||||||||| ||| |||||| || ||||||| |||||| ||| |||||||||| |||||||||||    
T  51331128 tgtaacatcctagactacttttaggattgccgactga-ccctacaaactaatacgagtc-tttcagtgtgttttgtcctcattcgcacgctta 51331218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 348
Target Start/End: Original strand, 12691914 - 12691945
Alignment:
Q  317 tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||||||||||||||||||||||||||    
T  12691914 tttgtcctcactcgcacgcttaccgggaaact 12691945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 40607187 - 40607132
Alignment:
Q  287 ccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccg 341  Q
    ||||||| |||||||||| |||||||||| ||| ||||||||||| ||||||||||    
T  40607187 ccacaaatcaacacgagttttttcagcgtattttgtcctcactcgaacgcttaccg 40607132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 14352090 - 14351989
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgt-gtttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||||||  |||| || ||||| ||||||||   ||||||||||| ||||||||||||| |  |||||| ||||| |||||||||| || ||    
T  14352090 tgtaacatcccatacgactttaagcattgctgactgaccat-acaaaccaacatgagtcttttcagcatattttgtcttcacttgcacgcttactggaaa 14351992  T
Q  346 act 348  Q
    |||    
T  14351991 act 14351989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 23942675 - 23942725
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgctta 338  Q
    ||||||||||||| ||| ||||| ||||||| |||||||||||||||||||    
T  23942675 acaaaccaacacgggtcctttcaacgtgttttgtcctcactcgcacgctta 23942725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Complemental strand, 27026760 - 27026726
Alignment:
Q  285 ccccacaaaccaacacgagtcttttcagcgtgttt 319  Q
    |||||||||| ||||||||||||||||||||||||    
T  27026760 ccccacaaacaaacacgagtcttttcagcgtgttt 27026726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 50814730 - 50814771
Alignment:
Q  308 ttcagcgtgttt-gtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  50814730 ttcagcgtgttttgtcctcactcgcacgtttaccgggaaact 50814771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 53854717 - 53854793
Alignment:
Q  272 attgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaaact 348  Q
    |||||||||| ||||  ||||| ||||||||||||||||| ||| ||| ||| ||||||||||| ||||||| |||||    
T  53854717 attgccgactaaccct-acaaatcaacacgagtcttttcaacgtattttgtcatcactcgcacgtttaccggtaaact 53854793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 10668426 - 10668386
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccc 287  Q
    ||||||| |||| |||||||||||||||||| |||||||||    
T  10668426 tgtaacaccccagactgctttcaggattgcccactgacccc 10668386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 10668932 - 10668892
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccc 287  Q
    ||||||| |||| |||||||||||||||||| |||||||||    
T  10668932 tgtaacaccccagactgctttcaggattgccaactgacccc 10668892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 10882571 - 10882531
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccc 287  Q
    ||||||| |||| |||||||||||||||||| |||||||||    
T  10882571 tgtaacaccccagactgctttcaggattgcccactgacccc 10882531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 107314 - 107415
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||||||||||| || ||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  107314 tgtaacatcccagactgctttcagaatagccgactgacccc-acaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccgggaa 107412  T
Q  346 act 348  Q
    |||    
T  107413 act 107415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 247 - 339
Target Start/End: Original strand, 13384 - 13476
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttac 339  Q
    |||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13384 tgtaacatcccggactgctttcaggattgccgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttac 13476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 69; Significance: 7e-31; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 162531 - 162630
Alignment:
Q  250 aacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtc-ttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaac 347  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| || |||||    
T  162531 aacatcccatactgctttcaggattgccgactga-ccccacaaaccaacacgagtctttttcagcgtgttttgtcctcactcgcacgcttatcgcgaaac 162629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 162985 - 163086
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||| |||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||    
T  162985 tgtaacatcccagactgttttcaggattgccgactggcccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgaacgcttaccgagaa 163083  T
Q  346 act 348  Q
    |||    
T  163084 act 163086  T

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Target: scaffold0022; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 163366 - 163265
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||||||||||| |||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  163366 tgtaacatcccagacgactttcaggattgtcgacagaccct-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaa 163268  T
Q  346 act 348  Q
    |||    
T  163267 act 163265  T

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Target: scaffold0022; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 247 - 337
Target Start/End: Original strand, 69666 - 69756
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgt-gtttgtcctcactcgcacgctt 337  Q
    |||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||||||| ||||| ||||||| |||||| |||||||    
T  69666 tgtaacatcccaaactgctttcaggattgccgactga-accaacaaaccaacacgagtctttttagcgtggtttgtcatcactcacacgctt 69756  T

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Target: scaffold0022; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 162483 - 162534
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaaca 299  Q
    ||||||||| || | |||||| ||||||||||||||| |||||||||||||||    
T  162483 tgtaacatctcagattgcttttaggattgccgactga-ccccacaaaccaaca 162534  T

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Target: scaffold0168 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 3037 - 2936
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||| | ||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  3037 tgtaacatccgagactgctttcagcattgccgactgacccc-acaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaa 2939  T
Q  346 act 348  Q
    |||    
T  2938 act 2936  T

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Target: scaffold0018 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 10595 - 10493
Alignment:
Q  246 ctgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccggga 344  Q
    ||||||||||||  ||| ||||||| |||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  10595 ctgtaacatccccgactactttcagcattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccagga 10497  T
Q  345 aact 348  Q
    ||||    
T  10496 aact 10493  T

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Target: scaffold1519 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 1552 - 1653
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| || ||||||||||||    
T  1552 tgtaacatcccagactgctttcaggattatcgactgacccc-acaaaccaacacgagtctttttagcgtgttttgtcctcactcacatgcttaccgggaa 1650  T
Q  346 act 348  Q
    |||    
T  1651 act 1653  T

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Target: scaffold0499 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 1902 - 2003
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||| ||||||| ||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  1902 tgtaacatcccaaacgacttttaggattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtattttgtcctcactcgcacgcttaccgggaa 2000  T
Q  346 act 348  Q
    |||    
T  2001 act 2003  T

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Target: scaffold0277 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 14553 - 14654
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||||||||||| |||| || |||||||| ||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||    
T  14553 tgtaacatcccagactgctttcagcattgtcggctgacccc-acaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacacttaccgggaa 14651  T
Q  346 act 348  Q
    |||    
T  14652 act 14654  T

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Target: scaffold0024 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 106015 - 105914
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||||| || ||||||||||| |||||||||||||||  | |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  106015 tgtaacatctcagactgctttcagaattgccgactgaccct-ataaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccaggaa 105917  T
Q  346 act 348  Q
    |||    
T  105916 act 105914  T

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Target: scaffold0002 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 247 - 341
Target Start/End: Complemental strand, 154597 - 154503
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccg 341  Q
    |||||||||||| ||||||||||| |||| ||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||| |||||||    
T  154597 tgtaacatcccagactgctttcagcattgtcgactgacccc-acaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccg 154503  T

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Target: scaffold0002; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 155049 - 154951
Alignment:
Q  250 aacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||    
T  155049 aacatcccagactgctttcagcattgtcgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactagcacacttaccgagaaact 154951  T

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Target: scaffold0217 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 605 - 504
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||| | ||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| || ||||| ||||||    
T  605 tgtaacatccgagactacttttaggattgccgactgacccc-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcacatgcttatcgggaa 507  T
Q  346 act 348  Q
    |||    
T  506 act 504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 255 - 348
Target Start/End: Complemental strand, 245369 - 245276
Alignment:
Q  255 cccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||| ||||||||||||| ||||||| ||| ||||||    
T  245369 cccatactgctttcaggattgccgactga-ccccgcaaaccaacacgagtcttttcaccgtgttttgtcctcactcacacgctttccgagaaact 245276  T

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Target: scaffold0005; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 245830 - 245742
Alignment:
Q  260 actgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaaact 348  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||| ||||||||||||| ||| ||| ||| ||||||    
T  245830 actgctttcaggattcccgactgacccc-acaaaccaacacgagtcttttcaacgtgttttgtcctcactcacacactttccgagaaact 245742  T

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Target: scaffold0040 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 2061 - 2162
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt-gtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||| ||||||| ||||||||||| |||||||||||||||||||||||  |||||| ||||||||||||||||||||||| ||    
T  2061 tgtaacatcccagacaacttttaggattgtcgactgacccc-acaaaccaacacgagtcttttcaatgtgttttgtcctcactcgcacgcttaccggaaa 2159  T
Q  346 act 348  Q
    |||    
T  2160 act 2162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 53; Significance: 3e-21; HSPs: 3)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 247 - 346
Target Start/End: Complemental strand, 5315 - 5216
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    |||||||||||| ||  |||| || |||| ||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  5315 tgtaacatcccagacgactttaagcattgtcgactgaccct-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaa 5217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 4855 - 4754
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccgggaa 345  Q
    ||||||||||||  |  |||| || |||| ||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  4855 tgtaacatcccagtcgactttaagcattgtcgactgaccct-acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaa 4757  T
Q  346 act 348  Q
    |||    
T  4756 act 4754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 5377 - 5320
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtg--tttgtcctcactcgcacgcttaccggga 344  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  5377 acaaaccaacacgagtcttttcagcgtgtttttgtcctcactcgcacacttaccggga 5320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 247 - 341
Target Start/End: Complemental strand, 2391 - 2297
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccg 341  Q
    ||||| |||||| |||||||| ||||||| ||||||| ||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  2391 tgtaaaatcccagactgcttttaggattgtcgactgatcct-acaaaccaacacgagtcttttcagcgtgttttctcctcactcgcacgcttaccg 2297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 68 - 1
Alignment:
Q  249 taacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgt 317  Q
    |||||||||| |||||||| ||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  68 taacatcccaaactgcttttaggattgcctactgaccct-acaaaccaacacgagtcttttcagcgtgt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 62975 - 63029
Alignment:
Q  264 ctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgtgttt 319  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  62975 ctttcaggattgccgactgacccc-acaaaccaatacgagtcttttcagcgtgttt 63029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 67214 - 67281
Alignment:
Q  247 tgtaacatcccatactgctttcaggattgccgactgacccccacaaaccaacacgagtcttttcagcgt 315  Q
    ||||||||| || |||||||||||||||||||| ||| |||||||||||||||| ||| |||| |||||    
T  67214 tgtaacatcacagactgctttcaggattgccgattga-ccccacaaaccaacacaagtgtttttagcgt 67281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 17493 - 17543
Alignment:
Q  292 aaccaacacgagtcttttcagcgtg-tttgtcctcactcgcacgcttaccg 341  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17493 aaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 17543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 18027 - 18080
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtgtt-tgtcctcactcgcacgcttaccg 341  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  18027 acaaatcaacacgagtcttttcagcgtgttgtgtcctcactcgcacgtttaccg 18080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 339
Target Start/End: Original strand, 37205 - 37256
Alignment:
Q  289 acaaaccaacacgagtcttttcagcgtgtttgt-cctcactcgcacgcttac 339  Q
    |||||||||||||| |||||||||||||||| | ||||||||||||| ||||    
T  37205 acaaaccaacacgaatcttttcagcgtgtttttccctcactcgcacgtttac 37256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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