View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17484_low_21 (Length: 239)

Name: NF17484_low_21
Description: NF17484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17484_low_21
NF17484_low_21
[»] chr4 (6 HSPs)
chr4 (1-222)||(21201178-21201399)
chr4 (2-222)||(27258318-27258538)
chr4 (20-202)||(40087859-40088038)
chr4 (33-216)||(35945590-35945769)
chr4 (20-154)||(44343826-44343957)
chr4 (19-158)||(2915802-2915941)
[»] chr8 (4 HSPs)
chr8 (20-221)||(8120584-8120784)
chr8 (24-168)||(27423214-27423360)
chr8 (91-158)||(11436094-11436161)
chr8 (59-168)||(24103536-24103644)
[»] chr6 (3 HSPs)
chr6 (20-202)||(25436876-25437058)
chr6 (19-215)||(25461854-25462051)
chr6 (64-154)||(29178908-29178998)
[»] chr1 (3 HSPs)
chr1 (19-131)||(39311999-39312111)
chr1 (11-131)||(16799192-16799312)
chr1 (55-156)||(25291772-25291873)
[»] chr2 (4 HSPs)
chr2 (20-168)||(42294961-42295109)
chr2 (56-157)||(26312731-26312832)
chr2 (20-211)||(15828064-15828253)
chr2 (55-132)||(38716108-38716185)
[»] chr7 (5 HSPs)
chr7 (20-202)||(6239822-6240005)
chr7 (64-157)||(41620281-41620374)
chr7 (92-168)||(15999467-15999544)
chr7 (92-168)||(14585597-14585674)
chr7 (124-202)||(32402485-32402560)
[»] chr5 (1 HSPs)
chr5 (20-100)||(624379-624460)


Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 21201399 - 21201178
Alignment:
Q  1 ctctacagtattcctccaaaagttgtacgaagctatagcttccatctcagaatcgtagctttataaatcttgcaaacctttatctttgtgaagttaattc 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21201399 ctctacaggattcctccaaaagttgtacgaagctatagcttccatctcagaatcgtagctttataaatcttgcaaacctttatctttgtgaagttaattc 21201300  T
Q  101 cttaaccagactttttcatttgaatctctaaaacctttttacatgctttatttacttccgaattttacgactttagtattttataaccttgtctttgtta 200  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21201299 cttaaccacactttttcatttgaatctctaaaacctttttacatgctttatttacttccgcattttacgactttagtattttataaccttgtctttgtta 21201200  T
Q  201 ttagtctttttgaatcctaaac 222  Q
    ||||||||||||||||||||||    
T  21201199 ttagtctttttgaatcctaaac 21201178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 27258538 - 27258318
Alignment:
Q  2 tctacagtattcctccaaaagttgtacgaagctatagcttccatctcagaatcgtagctttataaatcttgcaaacctttatctttgtgaagttaattcc 101  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||| |||||||||||    
T  27258538 tctacattattcctccaaaagttgtacgaagctatagcttccatctcagaattgtagttttttaaatcttgcaaacctttatctttgtcaagttaattcc 27258439  T
Q  102 ttaaccagactttttcatttgaatctctaaaacctttttacatgctttatttacttccgaattttacgactttagtattttataaccttgtctttgttat 201  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||| |||||||||||||||||    
T  27258438 ttaaccacactttttcatttgaatctctaaaacctttttacatgctttatttagttccgcattttacgactttagtatcttaaaaccttgtctttgttat 27258339  T
Q  202 tagtctttttgaatcctaaac 222  Q
    ||||||||||||||| |||||    
T  27258338 tagtctttttgaatcttaaac 27258318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 40088038 - 40087859
Alignment:
Q  20 aagttgtacgaagctatagcttccatctcagaatcgtagctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttcat 119  Q
    |||||||||||||||||||||| ||||| ||| | |||||||| ||||||||||||| || |||||||   ||||   ||||||||||| ||||||||      
T  40088038 aagttgtacgaagctatagctttcatcttagagttgtagctttctaaatcttgcaaatctctatctttaccaagt---ttccttaaccacactttttcgc 40087942  T
Q  120 ttgaatctctaaaacctttttacatgctttatttacttccgaattttacgactttagtattttataaccttgtctttgttatt 202  Q
    ||||||||||||  |||||||||||| |||||||||||  | ||||||| |||||||||| ||| || | |||||||||||||    
T  40087941 ttgaatctctaattcctttttacatgttttatttacttatgcattttactactttagtatcttaaaatcatgtctttgttatt 40087859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 216
Target Start/End: Original strand, 35945590 - 35945769
Alignment:
Q  33 ctatagcttccatctcagaatcgtagctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttcatttgaatctctaaa 132  Q
    ||||||||||||| ||||| | |||||||| ||||||||||| |||| ||| |||   || ||||||||||||||| |  |||||  || |||||| ||     
T  35945590 ctatagcttccatatcagatttgtagctttctaaatcttgcagacctctatatttaccaatttaattccttaaccacatcttttcgcttaaatctccaat 35945689  T
Q  133 acctttttacatgctttatttacttccgaattttacgactttagtattttataaccttgtctttgttattagtctttttgaatc 216  Q
     ||||||||||||||  |||||||||   ||||||| ||||||||||     ||| |||||||||||||| |||||||||||||    
T  35945690 tcctttttacatgctccatttacttctatattttactactttagtat----aaactttgtctttgttattcgtctttttgaatc 35945769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 44343957 - 44343826
Alignment:
Q  20 aagttgtacgaagctatagcttccatctcagaatcgtagctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttcat 119  Q
    |||||||| |||| |||| ||||||| ||| | | ||| |||| ||||||||||||  || |||||||   |||||||||||||||||| |||||||||     
T  44343957 aagttgtatgaagttataacttccatttcaaagttgtacctttctaaatcttgcaagtctctatctttaccaagttaattccttaaccacactttttcac 44343858  T
Q  120 ttgaatctctaaaacctttttacatgctttattta 154  Q
    || |||||||||   | ||||||||||||||||||    
T  44343857 ttaaatctctaa---cattttacatgctttattta 44343826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 2915941 - 2915802
Alignment:
Q  19 aaagttgtacgaagctatagcttccatctcagaatcgtagctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttca 118  Q
    |||||||||||||| | |||||| ||||||||| | |||||||| ||| ||||| |||| | ||||||    |||||||||| ||||| | |||||||||    
T  2915941 aaagttgtacgaagttgtagctttcatctcagagttgtagctttctaactcttgaaaacttctatcttgaccaagttaattctttaacgacactttttca 2915842  T
Q  119 tttgaatctctaaaacctttttacatgctttatttacttc 158  Q
     || ||||||||||    ||||| ||| ||||||||||||    
T  2915841 cttcaatctctaaatttcttttatatgttttatttacttc 2915802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 8120584 - 8120784
Alignment:
Q  20 aagttgtacgaagctatagcttccatctcagaatcgtagctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttcat 119  Q
    ||||||||||||||||||  |||| ||||| ||| |||||||| ||||||||||||||||||||||||   ||||||| |||||||||| | ||||| |     
T  8120584 aagttgtacgaagctataaattccttctcaaaattgtagctttctaaatcttgcaaacctttatctttaccaagttaactccttaaccaca-ttttttac 8120682  T
Q  120 ttgaatctctaaaacctttttacatgctttatttacttccgaattttacgactttagtattttataaccttgtctttgttattagtctttttgaatccta 219  Q
    ||||||||||||  ||||||||||||||||||||||||| | ||||||| |||||| ||| ||| ||| |||| ||||||||| ||||| ||| ||| ||    
T  8120683 ttgaatctctaattcctttttacatgctttatttacttctgcattttactactttactatcttaaaacattgtttttgttatttgtcttgttggatctta 8120782  T
Q  220 aa 221  Q
    ||    
T  8120783 aa 8120784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 168
Target Start/End: Complemental strand, 27423360 - 27423214
Alignment:
Q  24 tgtacgaagctatagcttccat--ctcagaatcgtagctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttcattt 121  Q
    ||||| ||||||| ||||||||  ||||| || |||||||| |||||||| ||||| ||||| |||   ||||||||| |||||||| ||||||||| ||    
T  27423360 tgtacaaagctattgcttccatgactcaggattgtagctttctaaatcttacaaacatttatttttactaagttaatttcttaaccacactttttcactt 27423261  T
Q  122 gaatctctaaaacctttttacatgctttatttacttccgaattttac 168  Q
    ||||||||||| | |||||| |||||||||||||||| |||||||||    
T  27423260 gaatctctaaatcttttttatatgctttatttacttctgaattttac 27423214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 11436094 - 11436161
Alignment:
Q  91 aagttaattccttaaccagactttttcatttgaatctctaaaacctttttacatgctttatttacttc 158  Q
    ||||||||||||||||||  ||| || | | ||||||||||| | ||||||| |||||||||||||||    
T  11436094 aagttaattccttaaccactcttcttaactagaatctctaaatcttttttacttgctttatttacttc 11436161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 168
Target Start/End: Complemental strand, 24103644 - 24103536
Alignment:
Q  59 ctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttcatttgaatctctaaaacctttttacatgctttatttacttc 158  Q
    |||| ||||| || ||||||| ||| |||  | |||||||| |||||||| |||||  || |||| |||||||| ||||||||| | |||||||||||||    
T  24103644 ctttctaaattttacaaacctctatttttacgtagttaatttcttaaccaaactttc-cacttgattctctaaatcctttttacttactttatttacttc 24103546  T
Q  159 cgaattttac 168  Q
     | |||||||    
T  24103545 tgcattttac 24103536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 25437058 - 25436876
Alignment:
Q  20 aagttgtacgaagctatagcttccatctcagaatcgtagctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttcat 119  Q
    |||||||| ||||||||||||||||||| ||| | ||| |||| |||||||||  || || |||||||   |||||||||||| ||||| |||||||||     
T  25437058 aagttgtatgaagctatagcttccatcttagagttgtaactttctaaatcttgtgaatctctatctttaccaagttaattcctcaaccacactttttcac 25436959  T
Q  120 ttgaatctctaaaacctttttacatgctttatttacttccgaattttacgactttagtattttataaccttgtctttgttatt 202  Q
    |||||||||||   ||||||||||||||||||||||||| | ||||||| ||||||| ||  || ||||||||| ||| ||||    
T  25436958 ttgaatctctatttcctttttacatgctttatttacttctgcattttactactttagcatcataaaaccttgtccttgctatt 25436876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 25462051 - 25461854
Alignment:
Q  19 aaagttgtacgaagctatagcttccatctcagaatcgtagctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccagacttttt-c 117  Q
    ||||||||| |||||||||||||| |||||| | | |||  ||| ||||||||| ||| || |||||||   |||||||||||||| | | ||||||| |    
T  25462051 aaagttgtatgaagctatagcttctatctcatagttgtaaatttctaaatcttgtaaatctctatctttaccaagttaattccttagctacacttttttc 25461952  T
Q  118 atttgaatctctaaaacctttttacatgctttatttacttccgaattttacgactttagtattttataaccttgtctttgttattagtctttttgaat 215  Q
    | ||||||||||||  | ||||||||||||||||||| ||| | ||||||| |||||||||| ||| ||||||||| ||  ||||  |||||||||||    
T  25461951 acttgaatctctaattcttttttacatgctttatttatttctgcattttactactttagtatcttagaaccttgtccttaatatttctctttttgaat 25461854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 154
Target Start/End: Complemental strand, 29178998 - 29178908
Alignment:
Q  64 taaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttcatttgaatctctaaaacctttttacatgctttattta 154  Q
    |||||||| ||||||| ||||||| | || |||||| |||||||| |  |||||| ||||||||||||| |||||||||||| ||||||||    
T  29178998 taaatcttacaaacctctatctttatcaaattaatttcttaaccacatattttcacttgaatctctaaatcctttttacatgttttattta 29178908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 39312111 - 39311999
Alignment:
Q  19 aaagttgtacgaagctatagcttccatctcagaatcgtagctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttca 118  Q
    |||||||||||||| |||| |||| ||| |||| | |||||||| |||||||||||||||| ||||||| | |||||||||||||||||| |||||||||    
T  39312111 aaagttgtacgaagttatatcttcaatcacagagttgtagctttctaaatcttgcaaacctctatctttatcaagttaattccttaaccacactttttca 39312012  T
Q  119 tttgaatctctaa 131  Q
     ||||||||||||    
T  39312011 cttgaatctctaa 39311999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 16799312 - 16799192
Alignment:
Q  11 ttcctccaaaagttgtacgaagctatagcttccatctcagaatcgtagctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccaga 110  Q
    |||||| | |||||||| |||| |||| ||||||||||||  | |||||||| |||||||||||||||| ||| |||   ||||||||||||| |||| |    
T  16799312 ttcctcaagaagttgtatgaagttataacttccatctcagcgttgtagctttctaaatcttgcaaacctctatttttaccaagttaattcctttaccaca 16799213  T
Q  111 ctttttcatttgaatctctaa 131  Q
    | |||||| ||||||||||||    
T  16799212 cgttttcacttgaatctctaa 16799192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 156
Target Start/End: Original strand, 25291772 - 25291873
Alignment:
Q  55 gtagctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttcatttgaatctctaaaacctttttacatgctttattta 154  Q
    |||||||| |||||||||||||||| ||||||  | ||||||||| ||||||   |  |||||| ||||||||||||| |||||||||||| ||||||||    
T  25291772 gtagctttctaaatcttgcaaacctctatcttgatcaagttaattacttaactgcatcttttcacttgaatctctaaatcctttttacatgttttattta 25291871  T
Q  155 ct 156  Q
    ||    
T  25291872 ct 25291873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 6e-24; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 168
Target Start/End: Complemental strand, 42295109 - 42294961
Alignment:
Q  20 aagttgtacgaagctatagcttccatctcagaatcgtagctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttcat 119  Q
    ||||||||| || ||||| |||||||||  || | ||||||||||||||||| |||| || ||| |||   |||||||||||||||| | |||||||||     
T  42295109 aagttgtaccaaactataacttccatctgcgagttgtagctttataaatcttacaaatctctatttttaccaagttaattccttaacaatactttttcac 42295010  T
Q  120 ttgaatctctaaaacctttttacatgctttatttacttccgaattttac 168  Q
     ||||||||||||  ||||| |||||||||||||||||| | |||||||    
T  42295009 atgaatctctaaattcttttgacatgctttatttacttctgcattttac 42294961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 26312731 - 26312832
Alignment:
Q  56 tagctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttcatttgaatctctaaaacctttttacatgctttatttac 155  Q
    ||||||| |||||| ||||||||| |||||||   |||||||||| ||||||| |  |||||| ||||||||||||| | |||||||||| |||||||||    
T  26312731 tagctttctaaatcgtgcaaacctctatctttagcaagttaattctttaaccacatcttttcaattgaatctctaaatcttttttacatgttttatttac 26312830  T
Q  156 tt 157  Q
    ||    
T  26312831 tt 26312832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 15828253 - 15828064
Alignment:
Q  20 aagttgtacgaagctatagcttccatctcagaatcgtagctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttcat 119  Q
    |||||||||||| |||||| |||||||||||| | || | |||  ||||||||||||| | |||||||   |||||   |||||||||| |  |||| |     
T  15828253 aagttgtacgaaactatagtttccatctcagagttgtggattttaaaatcttgcaaacatctatctttaccaagtt---tccttaaccacatgtttttac 15828157  T
Q  120 ttgaatctctaaaacctttttacatgctttatt-tacttccgaattttacgactttagtattttataaccttgtctttgttattagtcttttt 211  Q
    | ||||||||||  || |||||||||||||||| |||||  || |||| | |||||||||| |||  || |||||||||||||| ||||||||    
T  15828156 tcgaatctctaattcccttttacatgctttattatacttatgatttttgctactttagtatcttactacattgtctttgttatttgtcttttt 15828064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 38716108 - 38716185
Alignment:
Q  55 gtagctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttcatttgaatctctaaa 132  Q
    |||||||||||||||||| |||||| ||| |||   |||||||||| ||||||| | ||||||| ||||| |||||||    
T  38716108 gtagctttataaatcttgtaaacctctatgtttactaagttaattcattaaccatattttttcacttgaacctctaaa 38716185  T

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Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 6239822 - 6240005
Alignment:
Q  20 aagttgtacgaagctatagcttccatctcagaatcgtagctttataaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttcat 119  Q
    ||||| |||||||||||||||||||| ||||| | |||| ||| |||||| ||||||||  |||||||   |||| ||||||||||||| | |||||||     
T  6239822 aagttctacgaagctatagcttccatatcagagttgtagttttctaaatcatgcaaaccactatctttaccaagtcaattccttaaccacaatttttcac 6239921  T
Q  120 ttgaatctctaa--aacctttttacatgctttatttacttccgaattttacgactttagtattttataaccttgtctttgttatt 202  Q
    |||||||  |||   |  ||||||||||||||||||||||| | ||||||| | |||||  | ||| | ||||||||||||||||    
T  6239922 ttgaatcaataattcatttttttacatgctttatttacttctgcattttacta-tttagattcttaaagccttgtctttgttatt 6240005  T

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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 41620281 - 41620374
Alignment:
Q  64 taaatcttgcaaacctttatctttgtgaagttaattccttaaccagactttttcatttgaatctctaaaacctttttacatgctttatttactt 157  Q
    |||||| ||||||||||||| |||   |||||||||| ||||| | || |||| | |||||||||||||  ||||||| |||||||||||||||    
T  41620281 taaatcatgcaaacctttatttttaccaagttaattcgttaactaaacgtttttacttgaatctctaaattctttttatatgctttatttactt 41620374  T

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Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 15999544 - 15999467
Alignment:
Q  92 agttaattccttaaccagactttttcatttgaatctctaaaacct-ttttacatgctttatttacttccgaattttac 168  Q
    |||||||||||||||||    |||||| ||||||||||||||||  |||||||| ||||||||||||| | |||||||    
T  15999544 agttaattccttaaccacgtcttttcacttgaatctctaaaaccccttttacattctttatttacttctgcattttac 15999467  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 14585674 - 14585597
Alignment:
Q  92 agttaattccttaaccagactttttcatttgaatctctaaaa-cctttttacatgctttatttacttccgaattttac 168  Q
    ||||||||| |||||||    |||||| |||||||||||||| || |||||||| ||||||||||||| | |||||||    
T  14585674 agttaattctttaaccacgtcttttcacttgaatctctaaaatcccttttacattctttatttacttctgcattttac 14585597  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 202
Target Start/End: Original strand, 32402485 - 32402560
Alignment:
Q  124 atctctaaaacctttttacatgctttatttacttccgaattttacgactttagtattttataaccttgtctttgttatt 202  Q
    ||||||||| | |||||||||| |||||||||||  | |||||   |||||||||| ||| |||||| |||||||||||    
T  32402485 atctctaaatcttttttacatgttttatttacttatgcatttt---actttagtatcttaaaaccttatctttgttatt 32402560  T

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Target: chr5 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 624460 - 624379
Alignment:
Q  20 aagttgtacgaagctatagcttccatctcagaatcgtagc-tttataaatcttgcaaacctttatctttgtgaagttaattc 100  Q
    |||||||||||||||||| ||||||||| ||| | ||||| ||| |||||| ||||||||| ||| |||   ||||||||||    
T  624460 aagttgtacgaagctataacttccatcttagagttgtagcttttctaaatcctgcaaacctctatttttaccaagttaattc 624379  T

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